Project
PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Navigation
Downloads
Results for pou4f2
Z-value: 1.47
Motif logo
Transcription factors associated with pou4f2
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| pou4f2 | dr11_v1_chr1_+_36436936_36436936 | 0.91 | 2.2e-37 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr17_+_15433671 Show fit | 35.56 |
ENSDART00000149568
|
fatty acid binding protein 7, brain, a |
|
| chr17_+_15433518 Show fit | 34.77 |
ENSDART00000026180
|
fatty acid binding protein 7, brain, a |
|
| chr2_-_21082695 Show fit | 30.84 |
ENSDART00000032502
|
nebulette |
|
| chr6_+_27146671 Show fit | 25.38 |
ENSDART00000156792
|
kinesin family member 1Aa |
|
| chr7_+_73630751 Show fit | 23.58 |
ENSDART00000159745
|
si:dkey-46i9.1 |
|
| chr18_-_1185772 Show fit | 23.05 |
ENSDART00000143245
|
neuroplastin b |
|
| chr24_-_21923930 Show fit | 22.86 |
ENSDART00000131944
|
transgelin 3b |
|
| chr9_-_32753535 Show fit | 22.83 |
ENSDART00000060006
|
oligodendrocyte lineage transcription factor 2 |
|
| chr25_-_13842618 Show fit | 21.31 |
ENSDART00000160258
|
mitogen-activated protein kinase 8 interacting protein 1a |
|
| chr8_+_16025554 Show fit | 21.01 |
ENSDART00000110171
|
ELAV like neuron-specific RNA binding protein 4 |
Network of associatons between targets according to the STRING database.
First level regulatory network of pou4f2
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 3.4 | 30.8 | GO:0051965 | positive regulation of synapse assembly(GO:0051965) |
| 7.6 | 30.2 | GO:0019242 | methylglyoxal biosynthetic process(GO:0019242) glyceraldehyde-3-phosphate biosynthetic process(GO:0046166) |
| 0.9 | 26.2 | GO:0070593 | dendrite self-avoidance(GO:0070593) |
| 0.1 | 25.4 | GO:0030705 | cytoskeleton-dependent intracellular transport(GO:0030705) |
| 5.7 | 22.8 | GO:0021742 | abducens nucleus development(GO:0021742) |
| 0.1 | 21.5 | GO:0008380 | RNA splicing(GO:0008380) |
| 0.3 | 21.3 | GO:0046328 | regulation of JNK cascade(GO:0046328) |
| 0.1 | 20.2 | GO:0016042 | lipid catabolic process(GO:0016042) |
| 0.3 | 19.5 | GO:0051781 | positive regulation of cell division(GO:0051781) |
| 0.9 | 17.0 | GO:0031952 | regulation of protein autophosphorylation(GO:0031952) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 39.4 | GO:0045211 | postsynaptic membrane(GO:0045211) |
| 0.4 | 32.4 | GO:0005871 | kinesin complex(GO:0005871) |
| 0.7 | 31.2 | GO:0043204 | perikaryon(GO:0043204) |
| 0.0 | 31.1 | GO:0005576 | extracellular region(GO:0005576) |
| 0.2 | 30.8 | GO:0005925 | focal adhesion(GO:0005925) |
| 0.0 | 19.3 | GO:0005829 | cytosol(GO:0005829) |
| 0.2 | 17.9 | GO:0031902 | late endosome membrane(GO:0031902) |
| 0.1 | 17.8 | GO:0030424 | axon(GO:0030424) |
| 0.5 | 17.0 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
| 1.5 | 14.6 | GO:0098982 | GABA-ergic synapse(GO:0098982) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 4.7 | 70.3 | GO:0005504 | fatty acid binding(GO:0005504) |
| 0.0 | 39.1 | GO:0005509 | calcium ion binding(GO:0005509) |
| 0.0 | 37.7 | GO:0003723 | RNA binding(GO:0003723) |
| 7.6 | 30.2 | GO:0008929 | triose-phosphate isomerase activity(GO:0004807) methylglyoxal synthase activity(GO:0008929) |
| 0.8 | 26.2 | GO:0098632 | protein binding involved in cell-cell adhesion(GO:0098632) |
| 0.8 | 25.4 | GO:0008574 | ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574) |
| 0.8 | 20.4 | GO:0022848 | acetylcholine-gated cation channel activity(GO:0022848) |
| 0.2 | 19.5 | GO:0008201 | heparin binding(GO:0008201) |
| 0.0 | 18.7 | GO:0051015 | actin filament binding(GO:0051015) |
| 0.0 | 17.9 | GO:0046983 | protein dimerization activity(GO:0046983) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 20.2 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
| 1.2 | 19.5 | PID SYNDECAN 3 PATHWAY | Syndecan-3-mediated signaling events |
| 0.4 | 15.7 | ST G ALPHA I PATHWAY | G alpha i Pathway |
| 0.2 | 13.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
| 0.4 | 11.8 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
| 0.7 | 10.5 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
| 0.1 | 1.2 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
| 0.0 | 1.2 | PID CXCR4 PATHWAY | CXCR4-mediated signaling events |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 2.3 | 20.4 | REACTOME PRESYNAPTIC NICOTINIC ACETYLCHOLINE RECEPTORS | Genes involved in Presynaptic nicotinic acetylcholine receptors |
| 1.4 | 17.0 | REACTOME PLATELET SENSITIZATION BY LDL | Genes involved in Platelet sensitization by LDL |
| 0.4 | 16.9 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
| 0.9 | 13.9 | REACTOME HS GAG BIOSYNTHESIS | Genes involved in HS-GAG biosynthesis |
| 0.8 | 10.5 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
| 0.1 | 7.8 | REACTOME DNA REPAIR | Genes involved in DNA Repair |
| 0.3 | 6.3 | REACTOME LIGAND GATED ION CHANNEL TRANSPORT | Genes involved in Ligand-gated ion channel transport |
| 0.2 | 3.2 | REACTOME CALNEXIN CALRETICULIN CYCLE | Genes involved in Calnexin/calreticulin cycle |
| 0.0 | 2.2 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
| 0.1 | 2.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |