PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
phox2ba | dr11_v1_chr1_-_19079957_19079957 | 0.08 | 4.7e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_44829719 Show fit | 6.00 |
ENSDART00000019104
|
fructose-1,6-bisphosphatase 2 |
|
chr4_-_77551860 Show fit | 4.85 |
ENSDART00000188176
|
|
|
chr24_-_27436319 Show fit | 4.64 |
ENSDART00000171489
|
si:dkey-25o1.7 |
|
chr2_+_55982940 Show fit | 4.50 |
ENSDART00000097753
ENSDART00000097751 |
nicotinamide riboside kinase 2 |
|
chr1_+_58205904 Show fit | 3.88 |
ENSDART00000147324
|
si:dkey-222h21.12 |
|
chr1_-_33380011 Show fit | 3.70 |
ENSDART00000141347
ENSDART00000136383 |
CD99 molecule |
|
chr8_-_36370552 Show fit | 3.60 |
ENSDART00000097932
ENSDART00000148323 |
si:busm1-104n07.3 |
|
chr4_+_7841627 Show fit | 3.13 |
ENSDART00000037997
|
upper zone of growth plate and cartilage matrix associated a |
|
chr15_-_35960250 Show fit | 3.10 |
ENSDART00000186765
|
collagen, type IV, alpha 4 |
|
chr4_-_4834617 Show fit | 2.82 |
ENSDART00000141539
|
cytochrome c oxidase assembly factor 6 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 6.0 | GO:0005985 | sucrose metabolic process(GO:0005985) sucrose biosynthetic process(GO:0005986) disaccharide biosynthetic process(GO:0046351) |
0.2 | 4.9 | GO:0008535 | respiratory chain complex IV assembly(GO:0008535) |
0.1 | 4.6 | GO:0048247 | lymphocyte chemotaxis(GO:0048247) |
0.5 | 3.9 | GO:0031179 | peptide modification(GO:0031179) |
0.7 | 3.7 | GO:2000389 | neutrophil extravasation(GO:0072672) regulation of neutrophil extravasation(GO:2000389) positive regulation of neutrophil extravasation(GO:2000391) |
0.2 | 3.4 | GO:0036092 | phosphatidylinositol-3-phosphate biosynthetic process(GO:0036092) |
0.2 | 3.1 | GO:0045667 | regulation of osteoblast differentiation(GO:0045667) |
0.1 | 3.1 | GO:0030199 | collagen fibril organization(GO:0030199) |
0.0 | 2.5 | GO:0001708 | cell fate specification(GO:0001708) |
0.0 | 2.3 | GO:0007189 | adenylate cyclase-activating G-protein coupled receptor signaling pathway(GO:0007189) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.1 | GO:0005581 | collagen trimer(GO:0005581) |
0.0 | 2.3 | GO:0005942 | phosphatidylinositol 3-kinase complex(GO:0005942) |
0.0 | 2.3 | GO:0005795 | Golgi stack(GO:0005795) |
0.2 | 1.6 | GO:0031211 | serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211) |
0.1 | 1.6 | GO:0016328 | lateral plasma membrane(GO:0016328) |
0.0 | 1.3 | GO:0005643 | nuclear pore(GO:0005643) |
0.0 | 0.8 | GO:0005839 | proteasome core complex(GO:0005839) |
0.2 | 0.6 | GO:0090443 | FAR/SIN/STRIPAK complex(GO:0090443) |
0.0 | 0.4 | GO:0032420 | stereocilium(GO:0032420) |
0.0 | 0.3 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.0 | 6.0 | GO:0042132 | fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132) |
0.1 | 4.6 | GO:0048020 | CCR chemokine receptor binding(GO:0048020) |
0.6 | 4.5 | GO:0050262 | ribosylnicotinamide kinase activity(GO:0050262) |
0.4 | 3.9 | GO:0036374 | peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374) |
0.2 | 3.4 | GO:0035005 | 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005) |
0.0 | 3.1 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.1 | 2.1 | GO:0008449 | N-acetylglucosamine-6-sulfatase activity(GO:0008449) |
0.2 | 1.9 | GO:0003691 | double-stranded telomeric DNA binding(GO:0003691) |
0.0 | 1.8 | GO:0051959 | dynein light intermediate chain binding(GO:0051959) |
0.2 | 1.6 | GO:0004758 | serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.5 | PID AVB3 INTEGRIN PATHWAY | Integrins in angiogenesis |
0.0 | 2.1 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 1.7 | PID TCR PATHWAY | TCR signaling in naïve CD4+ T cells |
0.2 | 1.2 | ST IL 13 PATHWAY | Interleukin 13 (IL-13) Pathway |
0.0 | 0.3 | PID CONE PATHWAY | Visual signal transduction: Cones |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 6.0 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.3 | 3.4 | REACTOME SYNTHESIS OF PIPS AT THE LATE ENDOSOME MEMBRANE | Genes involved in Synthesis of PIPs at the late endosome membrane |
0.1 | 3.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.3 | REACTOME PTM GAMMA CARBOXYLATION HYPUSINE FORMATION AND ARYLSULFATASE ACTIVATION | Genes involved in PTM: gamma carboxylation, hypusine formation and arylsulfatase activation |
0.1 | 1.1 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 0.8 | REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES | Genes involved in Cross-presentation of soluble exogenous antigens (endosomes) |
0.0 | 0.5 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |