PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
mafk | dr11_v1_chr3_-_42981739_42981739 | -0.17 | 9.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_32818607 Show fit | 18.58 |
ENSDART00000075465
|
myosin light chain, phosphorylatable, fast skeletal muscle a |
|
chr22_-_13857729 Show fit | 14.90 |
ENSDART00000177971
|
S100 calcium binding protein, beta (neural) |
|
chr12_-_4683325 Show fit | 13.47 |
ENSDART00000152771
|
si:ch211-255p10.3 |
|
chr23_-_29376859 Show fit | 13.03 |
ENSDART00000146411
|
somatostatin 6 |
|
chr16_-_16182319 Show fit | 12.46 |
ENSDART00000103815
|
stathmin 2a |
|
chr15_+_37559570 Show fit | 12.09 |
ENSDART00000085522
|
heat shock protein, alpha-crystallin-related, b6 |
|
chr23_-_15878879 Show fit | 12.08 |
ENSDART00000010119
|
eukaryotic translation elongation factor 1 alpha 2 |
|
chr22_-_26595027 Show fit | 11.98 |
ENSDART00000184162
|
|
|
chr7_+_39386982 Show fit | 11.40 |
ENSDART00000146702
|
troponin I type 2b (skeletal, fast), tandem duplicate 2 |
|
chr2_-_2020044 Show fit | 10.65 |
ENSDART00000024135
|
tubulin, beta 2A class IIa |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 32.8 | GO:0007019 | microtubule depolymerization(GO:0007019) |
0.1 | 17.2 | GO:0030334 | regulation of cell migration(GO:0030334) |
0.0 | 15.6 | GO:0099536 | synaptic signaling(GO:0099536) |
0.5 | 13.2 | GO:0032233 | positive regulation of actin filament bundle assembly(GO:0032233) |
3.1 | 12.3 | GO:0021557 | oculomotor nerve development(GO:0021557) |
0.2 | 12.1 | GO:0006414 | translational elongation(GO:0006414) |
0.2 | 11.4 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.1 | 11.0 | GO:0018105 | peptidyl-serine phosphorylation(GO:0018105) |
0.2 | 10.7 | GO:0043123 | positive regulation of I-kappaB kinase/NF-kappaB signaling(GO:0043123) |
0.7 | 10.1 | GO:0043248 | proteasome assembly(GO:0043248) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 22.4 | GO:0030426 | growth cone(GO:0030426) |
0.2 | 19.2 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 18.8 | GO:0045202 | synapse(GO:0045202) |
0.3 | 18.7 | GO:0036379 | striated muscle thin filament(GO:0005865) myofilament(GO:0036379) |
0.1 | 15.3 | GO:0043025 | neuronal cell body(GO:0043025) |
0.3 | 13.5 | GO:0005758 | mitochondrial intermembrane space(GO:0005758) organelle envelope lumen(GO:0031970) |
0.3 | 11.9 | GO:0031941 | filamentous actin(GO:0031941) |
0.1 | 10.9 | GO:0030018 | Z disc(GO:0030018) |
0.1 | 9.8 | GO:0031201 | SNARE complex(GO:0031201) |
0.9 | 9.1 | GO:0042583 | chromaffin granule(GO:0042583) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 25.4 | GO:0015631 | tubulin binding(GO:0015631) |
0.0 | 23.1 | GO:0003779 | actin binding(GO:0003779) |
0.0 | 20.6 | GO:0005509 | calcium ion binding(GO:0005509) |
3.7 | 14.9 | GO:0044548 | S100 protein binding(GO:0044548) |
2.7 | 13.5 | GO:0016531 | copper chaperone activity(GO:0016531) |
0.1 | 12.9 | GO:0005544 | calcium-dependent phospholipid binding(GO:0005544) |
0.3 | 12.1 | GO:0003746 | translation elongation factor activity(GO:0003746) |
0.1 | 11.4 | GO:0004197 | cysteine-type endopeptidase activity(GO:0004197) |
0.3 | 11.2 | GO:0004712 | protein serine/threonine/tyrosine kinase activity(GO:0004712) |
0.2 | 11.0 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 12.4 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.2 | 10.3 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.3 | 8.9 | PID MAPK TRK PATHWAY | Trk receptor signaling mediated by the MAPK pathway |
0.1 | 3.6 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 2.8 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 2.7 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
0.2 | 2.1 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.1 | 2.1 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.1 | 1.8 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.0 | 1.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.7 | 14.9 | REACTOME ADVANCED GLYCOSYLATION ENDPRODUCT RECEPTOR SIGNALING | Genes involved in Advanced glycosylation endproduct receptor signaling |
0.2 | 9.1 | REACTOME CROSS PRESENTATION OF SOLUBLE EXOGENOUS ANTIGENS ENDOSOMES | Genes involved in Cross-presentation of soluble exogenous antigens (endosomes) |
0.1 | 9.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.9 | 7.1 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
0.1 | 4.7 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.6 | 2.9 | REACTOME THE NLRP3 INFLAMMASOME | Genes involved in The NLRP3 inflammasome |
0.1 | 2.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.3 | 2.4 | REACTOME DCC MEDIATED ATTRACTIVE SIGNALING | Genes involved in DCC mediated attractive signaling |
0.1 | 2.4 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.3 | 2.1 | REACTOME ACTIVATION OF THE AP1 FAMILY OF TRANSCRIPTION FACTORS | Genes involved in Activation of the AP-1 family of transcription factors |