PRJDB7713: Age associated transcriptome analysis in 5 tissues of zebrafish
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
hoxb9a | dr11_v1_chr3_+_23677351_23677351 | -0.14 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr23_+_7379728 Show fit | 9.40 |
ENSDART00000012194
|
GATA binding protein 5 |
|
chr12_-_20373058 Show fit | 7.00 |
ENSDART00000066382
|
aquaporin 8a, tandem duplicate 1 |
|
chr4_+_7391110 Show fit | 4.28 |
ENSDART00000160708
ENSDART00000187823 |
troponin I4a |
|
chr11_-_18253111 Show fit | 4.07 |
ENSDART00000125984
|
musculoskeletal, embryonic nuclear protein 1b |
|
chr2_+_52847049 Show fit | 3.89 |
ENSDART00000121980
|
cAMP responsive element binding protein 3-like 3b |
|
chr15_+_20403903 Show fit | 3.86 |
ENSDART00000134182
|
cytochrome c oxidase subunit VIIa polypeptide 1 (muscle) |
|
chr1_+_17900306 Show fit | 3.56 |
ENSDART00000089480
|
cytochrome P450, family 4, subfamily V, polypeptide 8 |
|
chr9_-_9980704 Show fit | 3.34 |
ENSDART00000130243
ENSDART00000193475 |
UDP glucuronosyltransferase 1 family a, b |
|
chr23_+_10352921 Show fit | 3.10 |
ENSDART00000081193
|
si:ch211-133j6.3 |
|
chr11_+_24314148 Show fit | 3.09 |
ENSDART00000171491
|
RAS (RAD and GEM)-like GTP-binding 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 9.4 | GO:0048618 | post-embryonic foregut morphogenesis(GO:0048618) |
0.1 | 4.2 | GO:0003009 | skeletal muscle contraction(GO:0003009) |
0.8 | 4.1 | GO:0035988 | chondrocyte proliferation(GO:0035988) |
0.6 | 3.9 | GO:0097250 | mitochondrial respiratory chain supercomplex assembly(GO:0097250) |
0.1 | 3.9 | GO:0030968 | endoplasmic reticulum unfolded protein response(GO:0030968) |
1.2 | 3.6 | GO:0010430 | fatty acid omega-oxidation(GO:0010430) |
0.6 | 3.1 | GO:1901842 | regulation of high voltage-gated calcium channel activity(GO:1901841) negative regulation of high voltage-gated calcium channel activity(GO:1901842) |
0.0 | 2.7 | GO:0034976 | response to endoplasmic reticulum stress(GO:0034976) |
0.0 | 2.6 | GO:0019722 | calcium-mediated signaling(GO:0019722) |
0.8 | 2.3 | GO:0005981 | regulation of glycogen catabolic process(GO:0005981) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | GO:0016459 | myosin complex(GO:0016459) |
0.1 | 4.2 | GO:0005861 | troponin complex(GO:0005861) |
0.1 | 3.9 | GO:0005746 | mitochondrial respiratory chain(GO:0005746) |
0.0 | 2.6 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.1 | 2.3 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.3 | 1.8 | GO:0005853 | eukaryotic translation elongation factor 1 complex(GO:0005853) |
0.0 | 1.7 | GO:0005901 | caveola(GO:0005901) plasma membrane raft(GO:0044853) |
0.0 | 1.4 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.3 | 1.3 | GO:1990909 | Wnt signalosome(GO:1990909) |
0.3 | 1.3 | GO:0034448 | EGO complex(GO:0034448) Gtr1-Gtr2 GTPase complex(GO:1990131) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 7.0 | GO:0015250 | water channel activity(GO:0015250) |
0.0 | 6.8 | GO:0003774 | motor activity(GO:0003774) |
0.0 | 5.1 | GO:0020037 | heme binding(GO:0020037) |
0.2 | 3.9 | GO:0035497 | cAMP response element binding(GO:0035497) |
0.1 | 3.9 | GO:0016675 | cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676) |
0.1 | 3.3 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
0.1 | 3.1 | GO:0005246 | calcium channel regulator activity(GO:0005246) |
0.0 | 2.4 | GO:0001594 | trace-amine receptor activity(GO:0001594) |
0.2 | 2.3 | GO:2001069 | glycogen binding(GO:2001069) |
0.0 | 2.2 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | PID MTOR 4PATHWAY | mTOR signaling pathway |
0.0 | 1.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 1.0 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
0.0 | 0.8 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 0.8 | PID EPO PATHWAY | EPO signaling pathway |
0.0 | 0.8 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 0.7 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.0 | 0.7 | PID CD40 PATHWAY | CD40/CD40L signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.9 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.0 | 2.8 | REACTOME PPARA ACTIVATES GENE EXPRESSION | Genes involved in PPARA Activates Gene Expression |
0.1 | 1.8 | REACTOME TRYPTOPHAN CATABOLISM | Genes involved in Tryptophan catabolism |
0.1 | 1.7 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.0 | 1.6 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 1.5 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.2 | 1.1 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |
0.0 | 1.1 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 0.8 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.0 | 0.8 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |