hg19_v2_chr8_+_125486939_125487026	0.618286	UGUGCUU	ENST00000303545.3|RNF139|ENSG00000170881.4|ring finger protein 139
hg19_v2_chr13_-_79233314_79233331	0.43856	UGUGCUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr5_+_61602055_61602083	0.434638	UGUGCUU	ENST00000381103.2|KIF2A|ENSG00000068796.12|kinesin heavy chain member 2A
hg19_v2_chr3_+_88188254_88188254	0.388141	UGUGCUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr14_+_61995722_61995846	0.346742	UGUGCUU	ENST00000556347.1|RP11-47I22.4|ENSG00000258989.1|RP11-47I22.4
hg19_v2_chr2_+_46769798_46769867	0.327763	UGUGCUU	ENST00000238738.4|RHOQ|ENSG00000119729.6|ras homolog family member Q
hg19_v2_chr3_-_182698381_182698431	0.317013	UGUGCUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr14_-_57735528_57735726	0.301532	UGUGCUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chr12_-_25102252_25102393	0.300734	UGUGCUU	ENST00000261192.7|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr15_-_52861394_52861436	0.291078	UGUGCUU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr14_+_32546485_32546532	0.288152	UGUGCUU	ENST00000345122.3|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000432921.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5 	ENST00000433497.1|ARHGAP5|ENSG00000100852.8|Rho GTPase activating protein 5
hg19_v2_chr12_+_21654714_21654767	0.283099	UGUGCUU	ENST00000542038.1|GOLT1B|ENSG00000111711.5|golgi transport 1B 	ENST00000540141.1|GOLT1B|ENSG00000111711.5|golgi transport 1B 	ENST00000229314.5|GOLT1B|ENSG00000111711.5|golgi transport 1B
hg19_v2_chr17_-_4269768_4269835	0.272748	UGUGCUU	ENST00000396981.2|UBE2G1|ENSG00000132388.8|ubiquitin-conjugating enzyme E2G 1
hg19_v2_chr2_+_39893043_39893118	0.26258	UGUGCUU	ENST00000281961.2|TMEM178A|ENSG00000152154.6|transmembrane protein 178A
hg19_v2_chr8_-_25315905_25315983	0.262068	UGUGCUU	ENST00000221200.4|KCTD9|ENSG00000104756.11|potassium channel tetramerization domain containing 9
hg19_v2_chr1_+_60280458_60280546	0.261514	UGUGCUU	ENST00000455990.1|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1 	ENST00000371208.3|HOOK1|ENSG00000134709.6|hook microtubule-tethering protein 1
hg19_v2_chr5_+_67511524_67511628	0.261194	UGUGCUU	ENST00000521381.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 	ENST00000521657.1|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr9_-_3525968_3526016	0.255582	UGUGCUU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chrX_-_117250740_117250828	0.254129	UGUGCUU	ENST00000371882.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000540167.1|KLHL13|ENSG00000003096.9|kelch-like family member 13 	ENST00000545703.1|KLHL13|ENSG00000003096.9|kelch-like family member 13
hg19_v2_chr20_-_14318248_14318264	0.252544	UGUGCUU	ENST00000378053.3|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3 	ENST00000341420.4|FLRT3|ENSG00000125848.9|fibronectin leucine rich transmembrane protein 3
hg19_v2_chr3_-_72496035_72496069	0.251296	UGUGCUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr1_-_59165763_59165780	0.247754	UGUGCUU	ENST00000472487.1|MYSM1|ENSG00000162601.5|Myb-like, SWIRM and MPN domains 1
hg19_v2_chr1_-_197169672_197169672	0.244861	UGUGCUU	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr2_+_208394616_208394655	0.244147	UGUGCUU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr15_+_63569731_63569783	0.239116	UGUGCUU	ENST00000261879.5|APH1B|ENSG00000138613.9|APH1B gamma secretase subunit
hg19_v2_chr7_-_121036337_121036429	0.236628	UGUGCUU	ENST00000426156.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000359943.3|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C 	ENST00000412653.1|FAM3C|ENSG00000196937.6|family with sequence similarity 3, member C
hg19_v2_chr11_-_27494279_27494308	0.23628	UGUGCUU	ENST00000379214.4|LGR4|ENSG00000205213.9|leucine-rich repeat containing G protein-coupled receptor 4
hg19_v2_chr2_+_187558698_187558795	0.23621	UGUGCUU	ENST00000304698.5|FAM171B|ENSG00000144369.8|family with sequence similarity 171, member B
hg19_v2_chr2_-_230933709_230933720	0.234977	UGUGCUU	ENST00000436869.1|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14 	ENST00000295190.4|SLC16A14|ENSG00000163053.6|solute carrier family 16, member 14
hg19_v2_chr14_-_73360796_73360817	0.233239	UGUGCUU	ENST00000556509.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3 	ENST00000541685.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3 	ENST00000546183.1|DPF3|ENSG00000205683.7|D4, zinc and double PHD fingers, family 3
hg19_v2_chrX_-_134049262_134049297	0.227759	UGUGCUU	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr13_-_86373536_86373623	0.225358	UGUGCUU	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr18_+_2655692_2655737	0.218706	UGUGCUU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr1_+_28832455_28832569	0.218266	UGUGCUU	ENST00000398958.2|RCC1|ENSG00000180198.11|regulator of chromosome condensation 1 	ENST00000427469.1|RCC1|ENSG00000180198.11|regulator of chromosome condensation 1 	ENST00000434290.1|RCC1|ENSG00000180198.11|regulator of chromosome condensation 1 	ENST00000373833.6|RCC1|ENSG00000180198.11|regulator of chromosome condensation 1
hg19_v2_chr1_+_206680879_206680896	0.21756	UGUGCUU	ENST00000355294.4|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5 	ENST00000367117.3|RASSF5|ENSG00000136653.15|Ras association (RalGDS/AF-6) domain family member 5
hg19_v2_chr2_+_238536207_238536290	0.213467	UGUGCUU	ENST00000308482.9|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr8_+_48920960_48921011	0.210925	UGUGCUU	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr12_-_29534074_29534127	0.207776	UGUGCUU	ENST00000546839.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000360150.4|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552155.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000550353.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000548441.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2 	ENST00000552132.1|ERGIC2|ENSG00000087502.13|ERGIC and golgi 2
hg19_v2_chr11_-_72853091_72853151	0.206677	UGUGCUU	ENST00000311172.7|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2 	ENST00000409314.1|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2
hg19_v2_chr1_+_178995021_178995072	0.206403	UGUGCUU	ENST00000263733.4|FAM20B|ENSG00000116199.7|family with sequence similarity 20, member B
hg19_v2_chr6_+_64281906_64281922	0.200266	UGUGCUU	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr2_-_55844720_55844772	0.197767	UGUGCUU	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr13_-_31038370_31038509	0.197202	UGUGCUU	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr10_+_64564469_64564535	0.196185	UGUGCUU	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr5_+_130599735_130599802	0.192686	UGUGCUU	ENST00000503291.1|CDC42SE2|ENSG00000158985.9|CDC42 small effector 2 	ENST00000360515.3|CDC42SE2|ENSG00000158985.9|CDC42 small effector 2 	ENST00000505065.1|CDC42SE2|ENSG00000158985.9|CDC42 small effector 2
hg19_v2_chr6_+_114178512_114178586	0.191043	UGUGCUU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr4_+_85504075_85504132	0.190987	UGUGCUU	ENST00000295887.5|CDS1|ENSG00000163624.5|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
hg19_v2_chrX_+_154299753_154299807	0.190003	UGUGCUU	ENST00000369459.2|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000369462.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000411985.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3 	ENST00000399042.1|BRCC3|ENSG00000185515.10|BRCA1/BRCA2-containing complex, subunit 3
hg19_v2_chr22_-_51001332_51001369	0.189962	UGUGCUU	ENST00000406915.3|SYCE3|ENSG00000217442.3|synaptonemal complex central element protein 3
hg19_v2_chr3_+_69812877_69812962	0.187527	UGUGCUU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr10_-_15210666_15210707	0.187515	UGUGCUU	ENST00000378165.4|NMT2|ENSG00000152465.13|N-myristoyltransferase 2
hg19_v2_chr11_-_102323489_102323576	0.187077	UGUGCUU	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr2_+_46926048_46926095	0.186796	UGUGCUU	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr1_+_210406121_210406162	0.185081	UGUGCUU	ENST00000367012.3|SERTAD4|ENSG00000082497.7|SERTA domain containing 4
hg19_v2_chr10_-_60027642_60027705	0.182775	UGUGCUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr16_+_12995468_12995497	0.180509	UGUGCUU	ENST00000424107.3|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558583.1|SHISA9|ENSG00000237515.6|shisa family member 9 	ENST00000558318.1|SHISA9|ENSG00000237515.6|shisa family member 9
hg19_v2_chr1_+_244816237_244816357	0.179521	UGUGCUU	ENST00000302550.11|DESI2|ENSG00000121644.14|desumoylating isopeptidase 2
hg19_v2_chr14_+_55493920_55494013	0.178607	UGUGCUU	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chrX_-_109561294_109561467	0.177401	UGUGCUU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr13_+_103451399_103451539	0.176396	UGUGCUU	ENST00000257336.1|BIVM|ENSG00000134897.9|basic, immunoglobulin-like variable motif containing 	ENST00000448849.2|BIVM|ENSG00000134897.9|basic, immunoglobulin-like variable motif containing
hg19_v2_chr18_-_53255766_53255860	0.175459	UGUGCUU	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr4_-_23891693_23891706	0.174945	UGUGCUU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr14_+_74111578_74111730	0.17414	UGUGCUU	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr4_+_140222609_140222742	0.173408	UGUGCUU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr10_+_18948311_18948417	0.172702	UGUGCUU	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr6_-_99963252_99963264	0.172553	UGUGCUU	ENST00000392738.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000327681.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000472914.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr2_-_61697862_61697919	0.171206	UGUGCUU	ENST00000398571.2|USP34|ENSG00000115464.10|ubiquitin specific peptidase 34
hg19_v2_chrX_+_107069063_107069123	0.170583	UGUGCUU	ENST00000262843.6|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr10_+_126490354_126490395	0.17044	UGUGCUU	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr10_+_112679301_112679346	0.170109	UGUGCUU	ENST00000265277.5|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans) 	ENST00000369452.4|SHOC2|ENSG00000108061.7|soc-2 suppressor of clear homolog (C. elegans)
hg19_v2_chr12_-_15942309_15942330	0.169974	UGUGCUU	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr9_-_125027079_125027130	0.169915	UGUGCUU	ENST00000417201.3|RBM18|ENSG00000119446.9|RNA binding motif protein 18
hg19_v2_chr10_+_22610124_22610188	0.168431	UGUGCUU	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr2_+_170590321_170590408	0.168099	UGUGCUU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr2_-_86850949_86851023	0.167554	UGUGCUU	ENST00000237455.4|RNF103|ENSG00000239305.2|ring finger protein 103
hg19_v2_chrX_+_24167746_24167811	0.167024	UGUGCUU	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr10_+_20105157_20105184	0.166056	UGUGCUU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr8_-_81083731_81083813	0.165391	UGUGCUU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr4_-_10458982_10459007	0.163006	UGUGCUU	ENST00000326756.3|ZNF518B|ENSG00000178163.3|zinc finger protein 518B
hg19_v2_chrX_-_20284958_20285039	0.162284	UGUGCUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr6_-_132272504_132272519	0.160838	UGUGCUU	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr11_-_94964354_94964374	0.158871	UGUGCUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr8_-_103876965_103877012	0.15774	UGUGCUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr1_+_63833261_63833282	0.156734	UGUGCUU	ENST00000371108.4|ALG6|ENSG00000088035.11|ALG6, alpha-1,3-glucosyltransferase
hg19_v2_chr1_-_21978312_21978363	0.156497	UGUGCUU	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr5_+_78532003_78532017	0.155794	UGUGCUU	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr17_+_55333876_55333939	0.155691	UGUGCUU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr3_+_32147997_32148009	0.155324	UGUGCUU	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr3_+_152017181_152017229	0.154985	UGUGCUU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr5_-_56247935_56247959	0.154926	UGUGCUU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr3_+_37903432_37903475	0.154109	UGUGCUU	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr4_+_183164574_183164586	0.153209	UGUGCUU	ENST00000511685.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr12_-_46662772_46662835	0.153098	UGUGCUU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr10_+_105726862_105726986	0.152905	UGUGCUU	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr20_-_524455_524466	0.151073	UGUGCUU	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr15_-_25684110_25684212	0.149826	UGUGCUU	ENST00000232165.3|UBE3A|ENSG00000114062.13|ubiquitin protein ligase E3A
hg19_v2_chr6_-_71666732_71666769	0.147437	UGUGCUU	ENST00000230053.6|B3GAT2|ENSG00000112309.6|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
hg19_v2_chr8_-_70747205_70747299	0.14721	UGUGCUU	ENST00000260126.4|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr1_+_180199393_180199426	0.147077	UGUGCUU	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr3_+_23986748_23986761	0.145231	UGUGCUU	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr22_+_25960786_25960854	0.144525	UGUGCUU	ENST00000324198.6|ADRBK2|ENSG00000100077.10|adrenergic, beta, receptor kinase 2
hg19_v2_chr10_+_96162242_96162283	0.143353	UGUGCUU	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr2_+_159313452_159313624	0.14292	UGUGCUU	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr15_-_52970820_52970960	0.142728	UGUGCUU	ENST00000261844.7|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000399202.4|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A 	ENST00000562135.1|FAM214A|ENSG00000047346.8|family with sequence similarity 214, member A
hg19_v2_chr6_-_105585022_105585112	0.142016	UGUGCUU	ENST00000314641.5|BVES|ENSG00000112276.9|blood vessel epicardial substance
hg19_v2_chrX_+_106045891_106046043	0.141852	UGUGCUU	ENST00000357242.5|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000310452.2|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000481617.2|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain) 	ENST00000276175.3|TBC1D8B|ENSG00000133138.15|TBC1 domain family, member 8B (with GRAM domain)
hg19_v2_chr8_+_26149007_26149061	0.140828	UGUGCUU	ENST00000380737.3|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha 	ENST00000524169.1|PPP2R2A|ENSG00000221914.4|protein phosphatase 2, regulatory subunit B, alpha
hg19_v2_chr7_+_30174426_30174441	0.14065	UGUGCUU	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr10_+_99344104_99344152	0.140527	UGUGCUU	ENST00000555577.1|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha 	ENST00000370649.3|PI4K2A|ENSG00000249967.1|Phosphatidylinositol 4-kinase type 2-alpha; Uncharacterized protein
hg19_v2_chr12_+_41086297_41086354	0.140259	UGUGCUU	ENST00000551295.2|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr20_+_58508817_58508867	0.14024	UGUGCUU	ENST00000358293.3|FAM217B|ENSG00000196227.6|family with sequence similarity 217, member B
hg19_v2_chr7_-_79082867_79082900	0.14019	UGUGCUU	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr1_+_212458834_212458896	0.140091	UGUGCUU	ENST00000261461.2|PPP2R5A|ENSG00000066027.7|protein phosphatase 2, regulatory subunit B', alpha
hg19_v2_chr11_-_73472096_73472204	0.139026	UGUGCUU	ENST00000541588.1|RAB6A|ENSG00000175582.15|RAB6A, member RAS oncogene family 	ENST00000336083.3|RAB6A|ENSG00000175582.15|RAB6A, member RAS oncogene family 	ENST00000540771.1|RAB6A|ENSG00000175582.15|RAB6A, member RAS oncogene family 	ENST00000310653.6|RAB6A|ENSG00000175582.15|RAB6A, member RAS oncogene family
hg19_v2_chr15_+_75287861_75287961	0.138896	UGUGCUU	ENST00000425597.3|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562327.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000568018.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000562212.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000567920.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000566872.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000361900.6|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5 	ENST00000545456.1|SCAMP5|ENSG00000198794.7|secretory carrier membrane protein 5
hg19_v2_chr10_-_104474128_104474209	0.138618	UGUGCUU	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr7_+_145813453_145813557	0.137821	UGUGCUU	ENST00000361727.3|CNTNAP2|ENSG00000174469.13|contactin associated protein-like 2
hg19_v2_chr12_-_118541743_118541777	0.13683	UGUGCUU	ENST00000359236.5|VSIG10|ENSG00000176834.9|V-set and immunoglobulin domain containing 10
hg19_v2_chr2_-_65357225_65357267	0.135478	UGUGCUU	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr2_-_201828356_201828412	0.134049	UGUGCUU	ENST00000234296.2|ORC2|ENSG00000115942.4|origin recognition complex, subunit 2
hg19_v2_chr6_+_148663729_148663847	0.132579	UGUGCUU	ENST00000367467.3|SASH1|ENSG00000111961.12|SAM and SH3 domain containing 1
hg19_v2_chr7_-_21985489_21985547	0.131031	UGUGCUU	ENST00000356195.5|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000447180.1|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000373934.4|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000457951.1|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like
hg19_v2_chr9_-_123476719_123476810	0.130374	UGUGCUU	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr15_+_59063478_59063561	0.130334	UGUGCUU	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr7_-_112579869_112579971	0.129696	UGUGCUU	ENST00000297145.4|C7orf60|ENSG00000164603.7|chromosome 7 open reading frame 60
hg19_v2_chr1_+_28995231_28995250	0.128159	UGUGCUU	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr2_-_153032484_153032537	0.127749	UGUGCUU	ENST00000263904.4|STAM2|ENSG00000115145.5|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg19_v2_chr12_+_79258547_79258607	0.127177	UGUGCUU	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr1_+_110693103_110693126	0.123958	UGUGCUU	ENST00000331565.4|SLC6A17|ENSG00000197106.6|solute carrier family 6 (neutral amino acid transporter), member 17
hg19_v2_chr2_-_166651191_166651213	0.123204	UGUGCUU	ENST00000392701.3|GALNT3|ENSG00000115339.9|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)
hg19_v2_chr14_-_77843390_77843462	0.123158	UGUGCUU	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr12_+_83080659_83080693	0.12302	UGUGCUU	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr1_-_115259337_115259515	0.122659	UGUGCUU	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr18_-_44336998_44337132	0.121807	UGUGCUU	ENST00000315087.7|ST8SIA5|ENSG00000101638.9|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5
hg19_v2_chr17_-_63052929_63052962	0.121623	UGUGCUU	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr8_+_17013515_17013540	0.121512	UGUGCUU	ENST00000262096.8|ZDHHC2|ENSG00000104219.8|zinc finger, DHHC-type containing 2
hg19_v2_chr5_-_54603368_54603550	0.121282	UGUGCUU	ENST00000508346.1|DHX29|ENSG00000067248.5|DEAH (Asp-Glu-Ala-His) box polypeptide 29 	ENST00000251636.5|DHX29|ENSG00000067248.5|DEAH (Asp-Glu-Ala-His) box polypeptide 29
hg19_v2_chr14_+_53196872_53196959	0.118607	UGUGCUU	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr7_-_91875358_91875480	0.117322	UGUGCUU	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr4_+_48343339_48343414	0.114265	UGUGCUU	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr4_+_99182593_99182669	0.114167	UGUGCUU	ENST00000508213.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408927.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000514122.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000453712.2|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000511212.1|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000408900.3|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1 	ENST00000339360.5|RAP1GDS1|ENSG00000138698.10|RAP1, GTP-GDP dissociation stimulator 1
hg19_v2_chr2_+_204192942_204193038	0.113357	UGUGCUU	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr3_+_3841108_3841126	0.112959	UGUGCUU	ENST00000319331.3|LRRN1|ENSG00000175928.5|leucine rich repeat neuronal 1
hg19_v2_chr4_-_78740511_78740544	0.112269	UGUGCUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr14_+_85996471_85996497	0.110203	UGUGCUU	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr2_+_172544182_172544292	0.109076	UGUGCUU	ENST00000409197.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000456808.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000409317.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000409773.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000411953.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000409453.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2
hg19_v2_chr16_+_22825475_22825498	0.108798	UGUGCUU	ENST00000261374.3|HS3ST2|ENSG00000122254.6|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
hg19_v2_chr9_-_5437818_5437903	0.10718	UGUGCUU	ENST00000223864.2|PLGRKT|ENSG00000107020.5|plasminogen receptor, C-terminal lysine transmembrane protein
hg19_v2_chr11_+_62475130_62475195	0.10485	UGUGCUU	ENST00000294117.5|GNG3|ENSG00000162188.5|guanine nucleotide binding protein (G protein), gamma 3
hg19_v2_chr11_-_123612319_123612395	0.104369	UGUGCUU	ENST00000526252.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000530393.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000533463.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000336139.4|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000529691.1|ZNF202|ENSG00000166261.6|zinc finger protein 202 	ENST00000528306.1|ZNF202|ENSG00000166261.6|zinc finger protein 202
hg19_v2_chr12_-_39299406_39299448	0.10356	UGUGCUU	ENST00000331366.5|CPNE8|ENSG00000139117.9|copine VIII
hg19_v2_chr3_-_150264272_150264428	0.102817	UGUGCUU	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr5_+_96271141_96271168	0.102351	UGUGCUU	ENST00000231368.5|LNPEP|ENSG00000113441.11|leucyl/cystinyl aminopeptidase
hg19_v2_chr5_+_109025067_109025146	0.100992	UGUGCUU	ENST00000261483.4|MAN2A1|ENSG00000112893.5|mannosidase, alpha, class 2A, member 1
hg19_v2_chr15_+_44829255_44829331	0.0997266	UGUGCUU	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr4_-_99579733_99579789	0.099583	UGUGCUU	ENST00000305798.3|TSPAN5|ENSG00000168785.3|tetraspanin 5
hg19_v2_chr19_-_38714847_38714890	0.0974796	UGUGCUU	ENST00000420980.2|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1 	ENST00000355526.4|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1
hg19_v2_chr2_+_170683942_170683972	0.096249	UGUGCUU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr4_-_185747188_185747273	0.09602	UGUGCUU	ENST00000507295.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000504900.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000281455.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1 	ENST00000454703.2|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr3_+_101292939_101293063	0.0957441	UGUGCUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr12_+_31812602_31812645	0.0956538	UGUGCUU	ENST00000538463.1|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000357721.3|METTL20|ENSG00000139160.9|methyltransferase like 20 	ENST00000539633.1|METTL20|ENSG00000139160.9|methyltransferase like 20
hg19_v2_chr3_-_88108192_88108203	0.095134	UGUGCUU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr2_+_28974668_28974729	0.0945216	UGUGCUU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr11_-_45307817_45307898	0.0943078	UGUGCUU	ENST00000020926.3|SYT13|ENSG00000019505.3|synaptotagmin XIII
hg19_v2_chr4_+_52709229_52709345	0.0925879	UGUGCUU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr1_-_57045228_57045242	0.0923111	UGUGCUU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr17_-_36762095_36762212	0.0920851	UGUGCUU	ENST00000578925.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1 	ENST00000264659.7|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr1_+_184356188_184356200	0.09197	UGUGCUU	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr1_-_109584608_109584712	0.0911531	UGUGCUU	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr2_+_235860616_235860645	0.0902384	UGUGCUU	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chrX_-_77041685_77041716	0.0888611	UGUGCUU	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr3_+_73045936_73046128	0.0885366	UGUGCUU	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chr4_+_129730779_129730826	0.0875395	UGUGCUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr7_-_55640176_55640228	0.0874764	UGUGCUU	ENST00000285279.5|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr4_+_38665810_38665827	0.0871614	UGUGCUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr8_+_62200509_62200590	0.0869291	UGUGCUU	ENST00000519846.1|CLVS1|ENSG00000177182.6|clavesin 1 	ENST00000518592.1|CLVS1|ENSG00000177182.6|clavesin 1 	ENST00000325897.4|CLVS1|ENSG00000177182.6|clavesin 1
hg19_v2_chr16_+_19535133_19535231	0.0866175	UGUGCUU	ENST00000396212.2|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa 	ENST00000381396.5|CCP110|ENSG00000103540.12|centriolar coiled coil protein 110kDa
hg19_v2_chr13_+_27131887_27131899	0.0863682	UGUGCUU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr6_+_45389893_45389914	0.0860658	UGUGCUU	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr15_-_77363513_77363570	0.0860224	UGUGCUU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr1_-_120190396_120190396	0.0859883	UGUGCUU	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chrX_+_117480036_117480139	0.0856629	UGUGCUU	ENST00000371822.5|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000254029.3|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000371825.3|WDR44|ENSG00000131725.9|WD repeat domain 44
hg19_v2_chr3_+_39093481_39093520	0.0851137	UGUGCUU	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr11_-_86666427_86666450	0.0845925	UGUGCUU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr18_+_67956135_67956144	0.0834128	UGUGCUU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr1_+_39456895_39456986	0.082991	UGUGCUU	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr18_+_21693306_21693322	0.0826785	UGUGCUU	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr7_+_23221438_23221487	0.0810564	UGUGCUU	ENST00000258742.5|NUPL2|ENSG00000136243.12|nucleoporin like 2
hg19_v2_chr10_+_70715884_70715943	0.0809459	UGUGCUU	ENST00000354185.4|DDX21|ENSG00000165732.8|DEAD (Asp-Glu-Ala-Asp) box helicase 21
hg19_v2_chr10_-_113943447_113943536	0.080681	UGUGCUU	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr13_-_40177261_40177339	0.0798367	UGUGCUU	ENST00000379589.3|LHFP|ENSG00000183722.7|lipoma HMGIC fusion partner
hg19_v2_chr8_-_8751068_8751158	0.0790034	UGUGCUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr8_+_12803176_12803195	0.0783752	UGUGCUU	ENST00000524591.2|KIAA1456|ENSG00000250305.4|KIAA1456
hg19_v2_chr3_+_132136331_132136378	0.0778534	UGUGCUU	ENST00000260818.6|DNAJC13|ENSG00000138246.11|DnaJ (Hsp40) homolog, subfamily C, member 13
hg19_v2_chr11_-_75062730_75062775	0.0774532	UGUGCUU	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr3_-_125239010_125239055	0.0772354	UGUGCUU	ENST00000536067.1|SNX4|ENSG00000114520.6|sorting nexin 4 	ENST00000251775.4|SNX4|ENSG00000114520.6|sorting nexin 4
hg19_v2_chr7_+_99613195_99613206	0.0772179	UGUGCUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr8_+_38614807_38614851	0.0765521	UGUGCUU	ENST00000330691.6|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000348567.4|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr12_-_89918522_89918588	0.0763028	UGUGCUU	ENST00000529983.2|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)
hg19_v2_chr5_-_38595498_38595514	0.0754936	UGUGCUU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr5_+_139175380_139175431	0.075369	UGUGCUU	ENST00000274710.3|PSD2|ENSG00000146005.3|pleckstrin and Sec7 domain containing 2
hg19_v2_chr7_-_42951509_42951904	0.0744543	UGUGCUU	ENST00000438029.1|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25 	ENST00000432637.1|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25 	ENST00000447342.1|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25 	ENST00000431882.2|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25 	ENST00000350427.4|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25 	ENST00000425683.1|C7orf25|ENSG00000136197.8|chromosome 7 open reading frame 25
hg19_v2_chr10_-_70287231_70287290	0.0744149	UGUGCUU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr2_-_200322723_200322819	0.0743214	UGUGCUU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr10_-_97321112_97321163	0.0736823	UGUGCUU	ENST00000607232.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371227.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371249.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371247.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000371246.2|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000393949.1|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000353505.5|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1 	ENST00000347291.4|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr4_-_39033963_39034047	0.0731561	UGUGCUU	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr12_+_69753448_69753577	0.0731251	UGUGCUU	ENST00000247843.2|YEATS4|ENSG00000127337.2|YEATS domain containing 4 	ENST00000548020.1|YEATS4|ENSG00000127337.2|YEATS domain containing 4 	ENST00000549685.1|YEATS4|ENSG00000127337.2|YEATS domain containing 4 	ENST00000552955.1|YEATS4|ENSG00000127337.2|YEATS domain containing 4
hg19_v2_chr3_+_107241783_107241850	0.0726358	UGUGCUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr1_+_9352939_9352964	0.0725357	UGUGCUU	ENST00000328089.6|SPSB1|ENSG00000171621.9|splA/ryanodine receptor domain and SOCS box containing 1
hg19_v2_chr12_-_67072714_67072925	0.0720973	UGUGCUU	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chr5_+_112312416_112312440	0.0717581	UGUGCUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr4_+_41937131_41937211	0.0693508	UGUGCUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr12_-_89919965_89919978	0.0690633	UGUGCUU	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chrX_-_15872914_15873054	0.0689597	UGUGCUU	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr4_-_47465666_47465736	0.0689487	UGUGCUU	ENST00000381571.4|COMMD8|ENSG00000169019.9|COMM domain containing 8
hg19_v2_chrX_+_56590002_56590072	0.0674975	UGUGCUU	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr5_-_89770582_89770603	0.0673493	UGUGCUU	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr19_-_2721412_2721419	0.0666998	UGUGCUU	ENST00000323469.4|DIRAS1|ENSG00000176490.4|DIRAS family, GTP-binding RAS-like 1
hg19_v2_chr19_-_39402798_39402833	0.0663681	UGUGCUU	ENST00000571838.1|CTC-360G5.1|ENSG00000262484.1|coiled-coil glutamate-rich protein 2
hg19_v2_chr6_-_36515177_36515270	0.0663125	UGUGCUU	ENST00000229812.7|STK38|ENSG00000112079.8|serine/threonine kinase 38
hg19_v2_chr3_-_122233723_122233797	0.0658087	UGUGCUU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr11_-_12030629_12030644	0.0657358	UGUGCUU	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr8_+_54764346_54764460	0.0654513	UGUGCUU	ENST00000297313.3|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20 	ENST00000344277.6|RGS20|ENSG00000147509.9|regulator of G-protein signaling 20
hg19_v2_chrX_+_133507327_133507386	0.0645805	UGUGCUU	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr12_-_118797475_118797527	0.064491	UGUGCUU	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr5_-_1524015_1524108	0.0642924	UGUGCUU	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr8_-_101965146_101965236	0.0641971	UGUGCUU	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr12_-_100536608_100536667	0.0638926	UGUGCUU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr3_+_23244780_23244837	0.0635512	UGUGCUU	ENST00000396703.1|UBE2E2|ENSG00000182247.5|ubiquitin-conjugating enzyme E2E 2
hg19_v2_chr1_+_93544791_93544807	0.063302	UGUGCUU	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr17_+_5031687_5031687	0.0631582	UGUGCUU	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr17_-_48943706_48943723	0.0622055	UGUGCUU	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr8_-_119634141_119634234	0.0617803	UGUGCUU	ENST00000409003.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526328.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000314727.4|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12 	ENST00000526765.1|SAMD12|ENSG00000177570.9|sterile alpha motif domain containing 12
hg19_v2_chr5_+_137688285_137688429	0.0615948	UGUGCUU	ENST00000314358.5|KDM3B|ENSG00000120733.9|lysine (K)-specific demethylase 3B
hg19_v2_chr1_+_36396677_36396749	0.0607153	UGUGCUU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr11_+_120207787_120207962	0.0606799	UGUGCUU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr7_-_103848405_103848495	0.0599507	UGUGCUU	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr1_+_193028552_193028589	0.0598592	UGUGCUU	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr17_+_16593539_16593639	0.0591975	UGUGCUU	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chrX_-_41782249_41782287	0.0591264	UGUGCUU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr2_-_101925055_101925174	0.0581827	UGUGCUU	ENST00000295317.3|RNF149|ENSG00000163162.4|ring finger protein 149
hg19_v2_chrX_+_16804544_16804613	0.0581699	UGUGCUU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr3_+_187930719_187930729	0.0579617	UGUGCUU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr6_-_24721054_24721074	0.0576065	UGUGCUU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr9_+_112403088_112403142	0.0575956	UGUGCUU	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr17_+_57408994_57409088	0.0571465	UGUGCUU	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chr17_-_33416231_33416338	0.0569738	UGUGCUU	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr11_+_74303575_74303606	0.0561361	UGUGCUU	ENST00000263681.2|POLD3|ENSG00000077514.4|polymerase (DNA-directed), delta 3, accessory subunit
hg19_v2_chr15_+_63481668_63481812	0.055947	UGUGCUU	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr2_-_54197915_54197977	0.0555679	UGUGCUU	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr5_+_138678131_138678169	0.0550187	UGUGCUU	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chrX_-_73834449_73834481	0.0547274	UGUGCUU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chrX_-_122866874_122866911	0.0539202	UGUGCUU	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr10_-_120514720_120514758	0.0536466	UGUGCUU	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr17_-_18266797_18266817	0.0536084	UGUGCUU	ENST00000316694.3|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000539052.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr2_-_25194963_25194976	0.0535556	UGUGCUU	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr4_-_152147579_152147750	0.0533764	UGUGCUU	ENST00000304527.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000455740.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000424281.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19 	ENST00000409598.4|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr8_-_18871159_18871201	0.053343	UGUGCUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr12_-_111180644_111180744	0.0531553	UGUGCUU	ENST00000551676.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000550991.1|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000335007.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme 	ENST00000340766.5|PPP1CC|ENSG00000186298.7|protein phosphatase 1, catalytic subunit, gamma isozyme
hg19_v2_chr12_+_32655048_32655108	0.0529606	UGUGCUU	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr11_-_94134558_94134594	0.0527558	UGUGCUU	ENST00000539203.2|GPR83|ENSG00000123901.4|G protein-coupled receptor 83 	ENST00000243673.2|GPR83|ENSG00000123901.4|G protein-coupled receptor 83
hg19_v2_chr13_+_28813645_28813770	0.0522761	UGUGCUU	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr11_-_124543725_124543777	0.0521883	UGUGCUU	ENST00000545756.1|SIAE|ENSG00000110013.8|sialic acid acetylesterase 	ENST00000263593.3|SIAE|ENSG00000110013.8|sialic acid acetylesterase
hg19_v2_chr2_+_179345173_179345221	0.0508168	UGUGCUU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr17_+_46125707_46125746	0.0504949	UGUGCUU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr11_+_93517393_93517465	0.0500859	UGUGCUU	ENST00000251871.3|MED17|ENSG00000042429.6|mediator complex subunit 17 	ENST00000530819.1|MED17|ENSG00000042429.6|mediator complex subunit 17
hg19_v2_chr20_-_40247133_40247194	0.0499331	UGUGCUU	ENST00000373233.3|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6 	ENST00000309279.7|CHD6|ENSG00000124177.10|chromodomain helicase DNA binding protein 6
hg19_v2_chr10_-_61666267_61666414	0.0496577	UGUGCUU	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chr14_+_52118576_52118673	0.0491365	UGUGCUU	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr11_+_32914579_32914724	0.0491347	UGUGCUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr12_+_22778009_22778112	0.0491212	UGUGCUU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr3_+_238273_238302	0.0490103	UGUGCUU	ENST00000256509.2|CHL1|ENSG00000134121.5|cell adhesion molecule L1-like
hg19_v2_chr13_+_97874574_97874609	0.0485094	UGUGCUU	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr3_-_160283348_160283376	0.0484772	UGUGCUU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr1_-_41131326_41131400	0.0482484	UGUGCUU	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr2_+_191045562_191045606	0.0477424	UGUGCUU	ENST00000340623.4|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr7_+_129710350_129710434	0.0475877	UGUGCUU	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr10_-_75910789_75910821	0.0474975	UGUGCUU	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr1_+_110091189_110091268	0.0471176	UGUGCUU	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr12_+_120884222_120884380	0.0469356	UGUGCUU	ENST00000551765.1|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C 	ENST00000229384.5|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C
hg19_v2_chr10_-_62704005_62704045	0.0466611	UGUGCUU	ENST00000337910.5|RHOBTB1|ENSG00000072422.12|Rho-related BTB domain containing 1
hg19_v2_chr16_+_81348528_81348578	0.0465017	UGUGCUU	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr2_-_120980939_120980984	0.0464496	UGUGCUU	ENST00000426077.2|TMEM185B|ENSG00000226479.3|transmembrane protein 185B
hg19_v2_chr6_-_53213780_53213947	0.0463808	UGUGCUU	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr7_+_23338819_23338973	0.0458431	UGUGCUU	ENST00000466681.1|MALSU1|ENSG00000156928.4|mitochondrial assembly of ribosomal large subunit 1
hg19_v2_chr21_+_35445827_35445886	0.0457877	UGUGCUU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chrX_+_155110956_155111047	0.0455569	UGUGCUU	ENST00000286448.6|VAMP7|ENSG00000124333.10|vesicle-associated membrane protein 7 	ENST00000262640.6|VAMP7|ENSG00000124333.10|vesicle-associated membrane protein 7 	ENST00000460621.1|VAMP7|ENSG00000124333.10|vesicle-associated membrane protein 7
hg19_v2_chr5_+_140345820_140345820	0.0452905	UGUGCUU	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr7_+_24612935_24612980	0.0446235	UGUGCUU	ENST00000222644.5|MPP6|ENSG00000105926.11|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)
hg19_v2_chr22_+_25202232_25202286	0.0433841	UGUGCUU	ENST00000400358.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1 	ENST00000400359.4|SGSM1|ENSG00000167037.14|small G protein signaling modulator 1
hg19_v2_chr10_+_85899196_85899273	0.0429804	UGUGCUU	ENST00000372134.3|GHITM|ENSG00000165678.15|growth hormone inducible transmembrane protein
hg19_v2_chr17_+_48638371_48638449	0.0427239	UGUGCUU	ENST00000360761.4|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENST00000352832.5|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit 	ENST00000354983.4|CACNA1G|ENSG00000006283.13|calcium channel, voltage-dependent, T type, alpha 1G subunit
hg19_v2_chr5_-_9546180_9546195	0.0424682	UGUGCUU	ENST00000382496.5|SEMA5A|ENSG00000112902.7|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
hg19_v2_chr6_+_170102210_170102275	0.0415679	UGUGCUU	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr2_-_64881018_64881064	0.0412781	UGUGCUU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr3_-_133969437_133969670	0.0410807	UGUGCUU	ENST00000460933.1|RYK|ENSG00000163785.8|receptor-like tyrosine kinase 	ENST00000296084.4|RYK|ENSG00000163785.8|receptor-like tyrosine kinase
hg19_v2_chr4_-_175443943_175444049	0.0410722	UGUGCUU	ENST00000296522.6|HPGD|ENSG00000164120.9|hydroxyprostaglandin dehydrogenase 15-(NAD)
hg19_v2_chr15_+_78556428_78556510	0.0410615	UGUGCUU	ENST00000394855.3|DNAJA4|ENSG00000140403.8|DnaJ (Hsp40) homolog, subfamily A, member 4 	ENST00000489435.2|DNAJA4|ENSG00000140403.8|DnaJ (Hsp40) homolog, subfamily A, member 4
hg19_v2_chr10_+_43572475_43572527	0.0405341	UGUGCUU	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr3_-_171178157_171178225	0.0401855	UGUGCUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr2_-_217236750_217236798	0.0401479	UGUGCUU	ENST00000273067.4|MARCH4|ENSG00000144583.4|membrane-associated ring finger (C3HC4) 4, E3 ubiquitin protein ligase
hg19_v2_chr10_+_126630692_126630692	0.039997	UGUGCUU	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chr8_+_81397876_81397902	0.0399968	UGUGCUU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr2_+_32582086_32582106	0.0398791	UGUGCUU	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chr5_-_79551858_79551907	0.0396857	UGUGCUU	ENST00000507668.2|SERINC5|ENSG00000164300.11|serine incorporator 5 	ENST00000512721.1|SERINC5|ENSG00000164300.11|serine incorporator 5
hg19_v2_chr6_-_24911195_24911343	0.0391896	UGUGCUU	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr7_-_17980091_17980136	0.0387376	UGUGCUU	ENST00000409389.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000409604.1|SNX13|ENSG00000071189.17|sorting nexin 13 	ENST00000428135.3|SNX13|ENSG00000071189.17|sorting nexin 13
hg19_v2_chr14_+_79745746_79745762	0.0383866	UGUGCUU	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr8_-_17104356_17104395	0.0383511	UGUGCUU	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr3_+_154797428_154797450	0.0381559	UGUGCUU	ENST00000460393.1|MME|ENSG00000196549.6|membrane metallo-endopeptidase
hg19_v2_chr7_-_102789629_102789685	0.0378923	UGUGCUU	ENST00000417955.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000341533.4|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D 	ENST00000425379.1|NAPEPLD|ENSG00000161048.7|N-acyl phosphatidylethanolamine phospholipase D
hg19_v2_chr1_+_174769006_174769070	0.0377398	UGUGCUU	ENST00000489615.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr11_+_58346584_58346607	0.0375153	UGUGCUU	ENST00000316059.6|ZFP91|ENSG00000186660.14|ZFP91 zinc finger protein
hg19_v2_chr13_-_49975632_49975735	0.0372685	UGUGCUU	ENST00000457041.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000355854.4|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr1_-_166028709_166028709	0.037228	UGUGCUU	ENST00000595430.1|AL626787.1|ENSG00000267884.1|AL626787.1
hg19_v2_chr5_+_68513557_68513616	0.0369594	UGUGCUU	ENST00000256441.4|MRPS36|ENSG00000134056.7|mitochondrial ribosomal protein S36
hg19_v2_chrX_-_85302531_85302570	0.0367334	UGUGCUU	ENST00000537751.1|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000358786.4|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1) 	ENST00000357749.2|CHM|ENSG00000188419.9|choroideremia (Rab escort protein 1)
hg19_v2_chr1_+_65613217_65613331	0.03664	UGUGCUU	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr1_-_235491462_235491534	0.036247	UGUGCUU	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr11_+_66059339_66059348	0.0360341	UGUGCUU	ENST00000327259.4|TMEM151A|ENSG00000179292.4|transmembrane protein 151A
hg19_v2_chr14_-_34420259_34420291	0.0349134	UGUGCUU	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr5_-_39074479_39074515	0.0347738	UGUGCUU	ENST00000514735.1|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000296782.5|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2 	ENST00000357387.3|RICTOR|ENSG00000164327.8|RPTOR independent companion of MTOR, complex 2
hg19_v2_chr8_-_82024290_82024310	0.0345438	UGUGCUU	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr13_+_39612442_39612482	0.0341556	UGUGCUU	ENST00000470258.1|NHLRC3|ENSG00000188811.8|NHL repeat containing 3 	ENST00000379600.3|NHLRC3|ENSG00000188811.8|NHL repeat containing 3
hg19_v2_chr14_+_24025194_24025231	0.0340008	UGUGCUU	ENST00000404535.3|THTPA|ENSG00000259431.1|thiamine triphosphatase 	ENST00000288014.6|THTPA|ENSG00000259431.1|thiamine triphosphatase
hg19_v2_chr7_-_112727774_112727833	0.0338259	UGUGCUU	ENST00000297146.3|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000501255.2|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr1_+_193091080_193091222	0.0336855	UGUGCUU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr6_+_121756809_121756838	0.0335599	UGUGCUU	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chrX_-_48824793_48824793	0.0331578	UGUGCUU	ENST00000376477.1|KCND1|ENSG00000102057.5|potassium voltage-gated channel, Shal-related subfamily, member 1
hg19_v2_chr3_-_156272872_156272923	0.0326435	UGUGCUU	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr1_+_61547894_61547980	0.0321091	UGUGCUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr18_+_33877654_33877799	0.0316551	UGUGCUU	ENST00000257209.4|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3 	ENST00000445677.1|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3 	ENST00000590592.1|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3 	ENST00000359247.4|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3
hg19_v2_chr17_-_49198216_49198236	0.0314567	UGUGCUU	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr5_+_140560980_140560980	0.0313942	UGUGCUU	ENST00000361016.2|PCDHB16|ENSG00000196963.2|protocadherin beta 16
hg19_v2_chr10_+_76871454_76871467	0.0310784	UGUGCUU	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr16_+_68119440_68119561	0.0309068	UGUGCUU	ENST00000346183.3|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000329524.4|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr3_+_58291965_58292038	0.0305514	UGUGCUU	ENST00000445193.3|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit 	ENST00000295959.5|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit 	ENST00000466547.1|RPP14|ENSG00000163684.7|ribonuclease P/MRP 14kDa subunit
hg19_v2_chrX_+_40944871_40944888	0.0303295	UGUGCUU	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr22_-_37823468_37823528	0.029257	UGUGCUU	ENST00000402918.2|ELFN2|ENSG00000166897.10|extracellular leucine-rich repeat and fibronectin type III domain containing 2
hg19_v2_chr15_+_57210818_57210930	0.0291259	UGUGCUU	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr9_-_127905736_127905815	0.0289445	UGUGCUU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr5_+_65440032_65440099	0.0286042	UGUGCUU	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr11_+_119019722_119019769	0.0283108	UGUGCUU	ENST00000307417.3|ABCG4|ENSG00000172350.5|ATP-binding cassette, sub-family G (WHITE), member 4
hg19_v2_chr6_-_32157947_32157992	0.0282655	UGUGCUU	ENST00000375050.4|PBX2|ENSG00000204304.7|pre-B-cell leukemia homeobox 2
hg19_v2_chrX_-_119603138_119603220	0.0282089	UGUGCUU	ENST00000200639.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000371335.4|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000538785.1|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2 	ENST00000434600.2|LAMP2|ENSG00000005893.11|lysosomal-associated membrane protein 2
hg19_v2_chr11_-_118047376_118047388	0.0280841	UGUGCUU	ENST00000278947.5|SCN2B|ENSG00000149575.5|sodium channel, voltage-gated, type II, beta subunit
hg19_v2_chr4_-_170192185_170192256	0.0279825	UGUGCUU	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chrX_-_70288234_70288291	0.0274426	UGUGCUU	ENST00000276105.3|SNX12|ENSG00000147164.7|sorting nexin 12 	ENST00000374274.3|SNX12|ENSG00000147164.7|sorting nexin 12
hg19_v2_chr6_-_7313381_7313458	0.0274139	UGUGCUU	ENST00000489567.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000479365.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000462112.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000397511.2|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000534851.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000474597.1|SSR1|ENSG00000124783.8|signal sequence receptor, alpha 	ENST00000244763.4|SSR1|ENSG00000124783.8|signal sequence receptor, alpha
hg19_v2_chr11_-_82782861_82782949	0.0271864	UGUGCUU	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr19_+_32896697_32896786	0.0269214	UGUGCUU	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr13_-_52027134_52027343	0.0268233	UGUGCUU	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr19_-_33166045_33166113	0.0266303	UGUGCUU	ENST00000586693.3|ANKRD27|ENSG00000105186.10|ankyrin repeat domain 27 (VPS9 domain) 	ENST00000587352.1|ANKRD27|ENSG00000105186.10|ankyrin repeat domain 27 (VPS9 domain) 	ENST00000586463.1|ANKRD27|ENSG00000105186.10|ankyrin repeat domain 27 (VPS9 domain) 	ENST00000306065.4|ANKRD27|ENSG00000105186.10|ankyrin repeat domain 27 (VPS9 domain)
hg19_v2_chr1_+_33207381_33207486	0.0263455	UGUGCUU	ENST00000401073.2|KIAA1522|ENSG00000162522.6|KIAA1522
hg19_v2_chr15_+_68346501_68346550	0.0259637	UGUGCUU	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr1_-_205601064_205601090	0.0258272	UGUGCUU	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr1_+_224301787_224301836	0.025578	UGUGCUU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chr20_+_3451650_3451729	0.0254404	UGUGCUU	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr7_-_138666053_138666146	0.0252409	UGUGCUU	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr8_+_41348072_41348112	0.0251514	UGUGCUU	ENST00000405786.2|GOLGA7|ENSG00000147533.12|golgin A7
hg19_v2_chr22_+_45559722_45559881	0.0244024	UGUGCUU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr11_+_56949221_56949221	0.0243987	UGUGCUU	ENST00000497933.1|LRRC55|ENSG00000183908.5|leucine rich repeat containing 55
hg19_v2_chr4_-_6383594_6383600	0.0241709	UGUGCUU	ENST00000335585.5|PPP2R2C|ENSG00000074211.9|protein phosphatase 2, regulatory subunit B, gamma
hg19_v2_chr10_+_22605304_22605372	0.0241576	UGUGCUU	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr5_+_49961727_49961740	0.0232953	UGUGCUU	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr2_-_96931679_96931756	0.0228592	UGUGCUU	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr3_-_69435224_69435280	0.0227018	UGUGCUU	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr1_-_149982624_149982719	0.0223397	UGUGCUU	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr20_+_51588873_51588953	0.022229	UGUGCUU	ENST00000371497.5|TSHZ2|ENSG00000182463.11|teashirt zinc finger homeobox 2
hg19_v2_chr7_+_155089486_155089599	0.0217528	UGUGCUU	ENST00000340368.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000344756.4|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000425172.1|INSIG1|ENSG00000186480.8|insulin induced gene 1 	ENST00000342407.5|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr5_+_126112794_126112928	0.0216716	UGUGCUU	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr12_-_49351148_49351222	0.021604	UGUGCUU	ENST00000398092.4|RP11-302B13.5|ENSG00000272822.1|ADP-ribosylation factor 3  	ENST00000539611.1|ARF3|ENSG00000134287.5|ADP-ribosylation factor 3
hg19_v2_chr2_-_225450013_225450068	0.0215983	UGUGCUU	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr20_-_43438912_43439165	0.0204381	UGUGCUU	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr8_+_22224811_22224822	0.0199975	UGUGCUU	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr17_-_48785216_48785291	0.0199805	UGUGCUU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr9_-_34376851_34376869	0.0190381	UGUGCUU	ENST00000297625.7|KIAA1161|ENSG00000164976.8|KIAA1161
hg19_v2_chr2_+_45878790_45878913	0.0188663	UGUGCUU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr9_-_20622478_20622542	0.0184643	UGUGCUU	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr1_+_178062855_178062903	0.0182353	UGUGCUU	ENST00000448150.3|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr3_+_33155444_33155492	0.0166125	UGUGCUU	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr14_+_90863327_90863356	0.0161235	UGUGCUU	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr7_-_129592700_129592828	0.0153594	UGUGCUU	ENST00000472396.1|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H 	ENST00000355621.3|UBE2H|ENSG00000186591.7|ubiquitin-conjugating enzyme E2H
hg19_v2_chr6_+_43543942_43544111	0.0150631	UGUGCUU	ENST00000372226.1|POLH|ENSG00000170734.7|polymerase (DNA directed), eta 	ENST00000443535.1|POLH|ENSG00000170734.7|polymerase (DNA directed), eta
hg19_v2_chr16_+_56225248_56225307	0.0140678	UGUGCUU	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr1_+_203274639_203274664	0.0139471	UGUGCUU	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr3_-_98620500_98620547	0.0136392	UGUGCUU	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr5_-_112630598_112630689	0.0133672	UGUGCUU	ENST00000302475.4|MCC|ENSG00000171444.13|mutated in colorectal cancers
hg19_v2_chr17_+_60536002_60536040	0.0130245	UGUGCUU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr1_-_31538517_31538632	0.0128702	UGUGCUU	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr6_-_52926539_52926668	0.0128327	UGUGCUU	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chrX_-_16888448_16888537	0.0124425	UGUGCUU	ENST00000468092.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000404022.1|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7 	ENST00000380087.2|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr3_+_38206975_38207101	0.012269	UGUGCUU	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr13_-_100624012_100624163	0.0121142	UGUGCUU	ENST00000267294.4|ZIC5|ENSG00000139800.8|Zic family member 5
hg19_v2_chr11_-_118661828_118661886	0.0120137	UGUGCUU	ENST00000264018.4|DDX6|ENSG00000110367.7|DEAD (Asp-Glu-Ala-Asp) box helicase 6
hg19_v2_chr19_+_56915668_56915732	0.0114615	UGUGCUU	ENST00000333201.9|ZNF583|ENSG00000198440.5|zinc finger protein 583 	ENST00000391778.3|ZNF583|ENSG00000198440.5|zinc finger protein 583
hg19_v2_chr11_+_12695944_12695989	0.0113939	UGUGCUU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr13_-_67804445_67804475	0.0108616	UGUGCUU	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr2_-_164592497_164592573	0.0108014	UGUGCUU	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr18_+_42260861_42260882	0.0107184	UGUGCUU	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr3_-_66551351_66551356	0.0106389	UGUGCUU	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr17_+_28443799_28443813	0.0103866	UGUGCUU	ENST00000584423.1|NSRP1|ENSG00000126653.11|nuclear speckle splicing regulatory protein 1 	ENST00000247026.5|NSRP1|ENSG00000126653.11|nuclear speckle splicing regulatory protein 1
hg19_v2_chr20_+_2854066_2854329	0.0103024	UGUGCUU	ENST00000455631.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000216877.6|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000399903.2|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000358719.4|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000431048.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000425918.2|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000430705.1|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A 	ENST00000318266.5|PTPRA|ENSG00000132670.16|protein tyrosine phosphatase, receptor type, A
hg19_v2_chr3_-_119813264_119813272	0.00992439	UGUGCUU	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr1_+_113010056_113010056	0.00988438	UGUGCUU	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr14_+_90422239_90422381	0.00969027	UGUGCUU	ENST00000393452.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000554180.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000393454.2|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553617.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000335725.4|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000357382.3|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000556867.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1 	ENST00000553527.1|TDP1|ENSG00000042088.9|tyrosyl-DNA phosphodiesterase 1
hg19_v2_chrX_+_149861836_149861883	0.00958079	UGUGCUU	ENST00000542156.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000370390.3|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000490316.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000445323.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000544228.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000451863.2|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr1_-_149889382_149889434	0.00895204	UGUGCUU	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr9_+_128024067_128024190	0.00884783	UGUGCUU	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr13_+_96329381_96329416	0.00860479	UGUGCUU	ENST00000602402.1|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3 	ENST00000376795.6|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3
hg19_v2_chr8_+_86376081_86376142	0.00836991	UGUGCUU	ENST00000285379.5|CA2|ENSG00000104267.5|carbonic anhydrase II
hg19_v2_chr4_-_18023350_18023499	0.00825906	UGUGCUU	ENST00000539056.1|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like 	ENST00000382226.5|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like 	ENST00000326877.4|LCORL|ENSG00000178177.10|ligand dependent nuclear receptor corepressor-like
hg19_v2_chr6_-_17987694_17987913	0.00793255	UGUGCUU	ENST00000378814.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378843.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378826.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378816.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000259711.6|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000502704.1|KIF13A|ENSG00000137177.14|kinesin family member 13A
hg19_v2_chr1_-_154155595_154155673	0.00727595	UGUGCUU	ENST00000328159.4|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368531.2|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000323144.7|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000368533.3|TPM3|ENSG00000143549.15|tropomyosin 3 	ENST00000341372.3|TPM3|ENSG00000143549.15|tropomyosin 3
hg19_v2_chr11_-_74109422_74109518	0.00676509	UGUGCUU	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr1_+_145470504_145470522	0.00656442	UGUGCUU	ENST00000323397.4|ANKRD34A|ENSG00000181039.7|ankyrin repeat domain 34A
hg19_v2_chr15_-_50411412_50411437	0.00650421	UGUGCUU	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr1_-_118472216_118472262	0.00634622	UGUGCUU	ENST00000369443.5|GDAP2|ENSG00000196505.6|ganglioside induced differentiation associated protein 2
hg19_v2_chr5_-_32313019_32313081	0.00619752	UGUGCUU	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chrX_+_106163626_106163638	0.00619721	UGUGCUU	ENST00000336803.1|CLDN2|ENSG00000165376.6|claudin 2
hg19_v2_chr1_-_78444776_78444800	0.00601128	UGUGCUU	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chrX_+_56259316_56259480	0.00600371	UGUGCUU	ENST00000468660.1|KLF8|ENSG00000102349.10|Kruppel-like factor 8
hg19_v2_chr2_+_191513959_191514047	0.00597571	UGUGCUU	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr17_-_46507537_46507555	0.00564605	UGUGCUU	ENST00000336915.6|SKAP1|ENSG00000141293.11|src kinase associated phosphoprotein 1
hg19_v2_chr5_+_140201183_140201361	0.0056167	UGUGCUU	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr19_+_13135386_13135435	0.00561664	UGUGCUU	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr1_+_155247207_155247374	0.00529252	UGUGCUU	ENST00000368358.3|HCN3|ENSG00000143630.5|hyperpolarization activated cyclic nucleotide-gated potassium channel 3
hg19_v2_chr2_-_230786679_230786758	0.00527702	UGUGCUU	ENST00000543084.1|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000343290.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000389044.4|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000283943.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12
hg19_v2_chr3_+_57541975_57542060	0.00517171	UGUGCUU	ENST00000487257.1|PDE12|ENSG00000174840.8|phosphodiesterase 12 	ENST00000311180.8|PDE12|ENSG00000174840.8|phosphodiesterase 12
hg19_v2_chr18_-_35145593_35145614	0.00463321	UGUGCUU	ENST00000334919.5|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000591282.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4 	ENST00000588597.1|CELF4|ENSG00000101489.14|CUGBP, Elav-like family member 4
hg19_v2_chr5_+_72251793_72251825	0.00454916	UGUGCUU	ENST00000430046.2|FCHO2|ENSG00000157107.9|FCH domain only 2 	ENST00000341845.6|FCHO2|ENSG00000157107.9|FCH domain only 2
hg19_v2_chr6_+_99282570_99282591	0.00410161	UGUGCUU	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr14_-_90085458_90085557	0.00409048	UGUGCUU	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr6_+_31126291_31126399	0.00386468	UGUGCUU	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr10_+_133918175_133918175	0.0037115	UGUGCUU	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr4_-_89744457_89744512	0.00367098	UGUGCUU	ENST00000395002.2|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr1_+_183441600_183441616	0.00306165	UGUGCUU	ENST00000367537.3|SMG7|ENSG00000116698.16|SMG7 nonsense mediated mRNA decay factor
hg19_v2_chr3_+_196594727_196594816	0.00299875	UGUGCUU	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr1_-_153935983_153936048	0.00274218	UGUGCUU	ENST00000537590.1|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1 	ENST00000356205.4|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1
hg19_v2_chr12_+_3186521_3186575	0.00269889	UGUGCUU	ENST00000537971.1|TSPAN9|ENSG00000011105.7|tetraspanin 9 	ENST00000011898.5|TSPAN9|ENSG00000011105.7|tetraspanin 9
hg19_v2_chr13_+_47127293_47127321	0.00230375	UGUGCUU	ENST00000311191.6|LRCH1|ENSG00000136141.10|leucine-rich repeats and calponin homology (CH) domain containing 1
hg19_v2_chr7_-_23053693_23053715	0.00229291	UGUGCUU	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr6_+_101846664_101846702	0.00158486	UGUGCUU	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr7_+_50344289_50344378	0.00152077	UGUGCUU	ENST00000413698.1|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000359197.5|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000331340.3|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000357364.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000343574.5|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000349824.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000346667.4|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros) 	ENST00000440768.2|IKZF1|ENSG00000185811.12|IKAROS family zinc finger 1 (Ikaros)
hg19_v2_chr17_+_7761013_7761074	0.00140028	UGUGCUU	ENST00000571846.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr12_-_48499591_48499663	0.00119073	UGUGCUU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr4_-_168155730_168155740	0.000658426	UGUGCUU	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr16_-_23160591_23160787	0.000645721	UGUGCUU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr20_+_35201857_35201891	0.000620349	UGUGCUU	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr17_+_1182948_1182967	0.000170155	UGUGCUU	ENST00000333813.3|TUSC5|ENSG00000184811.3|tumor suppressor candidate 5
