hg19_v2_chr22_-_29075853_29075853	0.0249476	UGCAUUG	ENST00000397906.2|TTC28|ENSG00000100154.10|tetratricopeptide repeat domain 28
hg19_v2_chr15_+_89631381_89631391	0.0210227	UGCAUUG	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr11_+_5617330_5617359	0.0202101	UGCAUUG	ENST00000278302.5|TRIM6|ENSG00000121236.15|tripartite motif containing 6 	ENST00000424369.1|TRIM6|ENSG00000121236.15|tripartite motif containing 6 	ENST00000507320.1|TRIM6|ENSG00000121236.15|tripartite motif containing 6 	ENST00000380107.1|TRIM6|ENSG00000121236.15|tripartite motif containing 6
hg19_v2_chr2_-_122042770_122042785	0.0170941	UGCAUUG	ENST00000263707.5|TFCP2L1|ENSG00000115112.7|transcription factor CP2-like 1
hg19_v2_chr20_+_52105495_52105495	0.0153393	UGCAUUG	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr5_+_140345820_140345820	0.0152218	UGCAUUG	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr10_+_63661053_63661079	0.0151346	UGCAUUG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr1_-_85666688_85666729	0.0148488	UGCAUUG	ENST00000341460.5|SYDE2|ENSG00000097096.8|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
hg19_v2_chr14_-_59932044_59932114	0.0142136	UGCAUUG	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr5_+_140207536_140207650	0.0135581	UGCAUUG	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr2_+_178077477_178077525	0.012041	UGCAUUG	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr5_+_65440032_65440099	0.0119564	UGCAUUG	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr1_-_20812690_20812763	0.0113519	UGCAUUG	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr2_-_201936302_201936416	0.0111028	UGCAUUG	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr2_-_222436988_222437031	0.0108653	UGCAUUG	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chr6_+_37137939_37138004	0.0107318	UGCAUUG	ENST00000373509.5|PIM1|ENSG00000137193.9|pim-1 oncogene
hg19_v2_chr8_+_104831472_104831510	0.0106345	UGCAUUG	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr12_+_111843749_111843763	0.0101473	UGCAUUG	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr7_+_155250824_155250824	0.0101244	UGCAUUG	ENST00000297375.4|EN2|ENSG00000164778.4|engrailed homeobox 2
hg19_v2_chr5_+_140306478_140306478	0.00997646	UGCAUUG	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr8_-_38386175_38386180	0.00995426	UGCAUUG	ENST00000437935.2|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86 	ENST00000358138.1|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86
hg19_v2_chr17_+_41177220_41177282	0.00986896	UGCAUUG	ENST00000587250.2|RND2|ENSG00000108830.7|Rho family GTPase 2 	ENST00000544533.1|RND2|ENSG00000108830.7|Rho family GTPase 2
hg19_v2_chr9_-_3525968_3526016	0.00936486	UGCAUUG	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr12_-_31744031_31744059	0.00929918	UGCAUUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr9_-_126030817_126030906	0.00909376	UGCAUUG	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr3_-_64211112_64211152	0.00892889	UGCAUUG	ENST00000295902.6|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr3_-_45017609_45017687	0.00892743	UGCAUUG	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr1_+_182992545_182992630	0.00877498	UGCAUUG	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr21_+_33245548_33245628	0.00864402	UGCAUUG	ENST00000270112.2|HUNK|ENSG00000142149.4|hormonally up-regulated Neu-associated kinase
hg19_v2_chr11_-_68609377_68609399	0.0082201	UGCAUUG	ENST00000265641.5|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver) 	ENST00000376618.2|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver)
hg19_v2_chr10_+_111767720_111767752	0.00811075	UGCAUUG	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr12_+_3186521_3186575	0.00799838	UGCAUUG	ENST00000537971.1|TSPAN9|ENSG00000011105.7|tetraspanin 9 	ENST00000011898.5|TSPAN9|ENSG00000011105.7|tetraspanin 9
hg19_v2_chr8_+_48920960_48921011	0.00791696	UGCAUUG	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr4_-_141348999_141349122	0.00744568	UGCAUUG	ENST00000325617.5|CLGN|ENSG00000153132.8|calmegin
hg19_v2_chr5_+_172483347_172483407	0.00740392	UGCAUUG	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr6_-_91006461_91006517	0.00732858	UGCAUUG	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr3_-_53381539_53381654	0.00705448	UGCAUUG	ENST00000606822.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000294241.6|DCP1A|ENSG00000162290.12|decapping mRNA 1A 	ENST00000607628.1|DCP1A|ENSG00000162290.12|decapping mRNA 1A
hg19_v2_chr11_+_18720316_18720338	0.00694682	UGCAUUG	ENST00000280734.2|TMEM86A|ENSG00000151117.4|transmembrane protein 86A
hg19_v2_chr5_+_140254884_140255058	0.00694215	UGCAUUG	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr16_-_70472946_70473024	0.00681874	UGCAUUG	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr6_-_52441713_52441784	0.00681551	UGCAUUG	ENST00000182527.3|TRAM2|ENSG00000065308.4|translocation associated membrane protein 2
hg19_v2_chr11_-_108093329_108093375	0.0068073	UGCAUUG	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr7_+_12610307_12610314	0.00668579	UGCAUUG	ENST00000297029.5|SCIN|ENSG00000006747.10|scinderin
hg19_v2_chr2_+_26467762_26467817	0.00646152	UGCAUUG	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr10_+_76586348_76586400	0.00638897	UGCAUUG	ENST00000372724.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000287239.4|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B 	ENST00000372714.1|KAT6B|ENSG00000156650.8|K(lysine) acetyltransferase 6B
hg19_v2_chr17_+_8924837_8924872	0.00619452	UGCAUUG	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr7_+_43152191_43152211	0.00612929	UGCAUUG	ENST00000395891.2|HECW1|ENSG00000002746.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr1_+_101702417_101702481	0.0060768	UGCAUUG	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr18_+_11981427_11981485	0.00606166	UGCAUUG	ENST00000269159.3|IMPA2|ENSG00000141401.7|inositol(myo)-1(or 4)-monophosphatase 2
hg19_v2_chr11_-_82782861_82782949	0.0060547	UGCAUUG	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr7_+_88388628_88388682	0.00599701	UGCAUUG	ENST00000333190.4|ZNF804B|ENSG00000182348.5|zinc finger protein 804B
hg19_v2_chr15_+_52311398_52311461	0.00599187	UGCAUUG	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr4_-_138453606_138453673	0.00569933	UGCAUUG	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr8_-_125384927_125384952	0.00567297	UGCAUUG	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr4_+_81951957_81952119	0.0055722	UGCAUUG	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr20_+_46130601_46130613	0.00554893	UGCAUUG	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr7_+_35840542_35840671	0.00554734	UGCAUUG	ENST00000435235.1|SEPT7|ENSG00000122545.13|septin 7 	ENST00000399034.2|SEPT7|ENSG00000122545.13|septin 7 	ENST00000350320.6|SEPT7|ENSG00000122545.13|septin 7 	ENST00000469679.2|SEPT7|ENSG00000122545.13|septin 7
hg19_v2_chr15_+_85359911_85359911	0.00538613	UGCAUUG	ENST00000258888.5|ALPK3|ENSG00000136383.6|alpha-kinase 3
hg19_v2_chr7_-_117513540_117513587	0.00537885	UGCAUUG	ENST00000160373.3|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr5_+_134094461_134094494	0.00523719	UGCAUUG	ENST00000452510.2|DDX46|ENSG00000145833.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 	ENST00000354283.4|DDX46|ENSG00000145833.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
hg19_v2_chr9_+_124413873_124413969	0.00523609	UGCAUUG	ENST00000408936.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr5_+_153570285_153570308	0.00517138	UGCAUUG	ENST00000425427.2|GALNT10|ENSG00000164574.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10) 	ENST00000297107.6|GALNT10|ENSG00000164574.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)
hg19_v2_chr8_+_110552337_110552423	0.00515474	UGCAUUG	ENST00000337573.5|EBAG9|ENSG00000147654.10|estrogen receptor binding site associated, antigen, 9
hg19_v2_chr5_+_56205081_56205092	0.00511783	UGCAUUG	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr16_-_53737795_53737850	0.00497898	UGCAUUG	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr14_+_57046500_57046529	0.00496311	UGCAUUG	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr2_-_37193606_37193633	0.00493224	UGCAUUG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr1_-_19811962_19811994	0.00489583	UGCAUUG	ENST00000375142.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta 	ENST00000264202.6|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr10_+_54074033_54074056	0.00488338	UGCAUUG	ENST00000373970.3|DKK1|ENSG00000107984.5|dickkopf WNT signaling pathway inhibitor 1
hg19_v2_chr8_-_53322303_53322340	0.00482955	UGCAUUG	ENST00000276480.7|ST18|ENSG00000147488.7|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v2_chr10_-_94003003_94003013	0.00474222	UGCAUUG	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr2_-_180726232_180726275	0.00474112	UGCAUUG	ENST00000410066.1|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr5_+_140220769_140220907	0.00474098	UGCAUUG	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr13_+_43597269_43597339	0.00465477	UGCAUUG	ENST00000379221.2|DNAJC15|ENSG00000120675.4|DnaJ (Hsp40) homolog, subfamily C, member 15
hg19_v2_chr2_+_204192942_204193038	0.00460721	UGCAUUG	ENST00000295851.5|ABI2|ENSG00000138443.11|abl-interactor 2 	ENST00000261017.5|ABI2|ENSG00000138443.11|abl-interactor 2
hg19_v2_chr5_+_140165876_140165876	0.00459671	UGCAUUG	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr3_+_174577070_174577136	0.00458878	UGCAUUG	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr3_-_141868357_141868393	0.00454469	UGCAUUG	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr17_-_62502639_62502849	0.00451659	UGCAUUG	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr5_+_140213815_140213969	0.0045124	UGCAUUG	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr1_-_46598284_46598356	0.00445617	UGCAUUG	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr4_+_134070439_134070470	0.00443705	UGCAUUG	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr1_-_116383738_116383752	0.00440789	UGCAUUG	ENST00000320238.3|NHLH2|ENSG00000177551.5|nescient helix loop helix 2
hg19_v2_chr16_+_69221028_69221092	0.00432305	UGCAUUG	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr20_+_11871371_11871428	0.0043193	UGCAUUG	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr15_-_45815005_45815032	0.00431917	UGCAUUG	ENST00000261867.4|SLC30A4|ENSG00000104154.5|solute carrier family 30 (zinc transporter), member 4
hg19_v2_chr6_+_118869452_118869475	0.00429784	UGCAUUG	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr1_+_11072696_11072735	0.00423813	UGCAUUG	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr4_-_53525406_53525502	0.00420631	UGCAUUG	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr9_+_36036430_36036430	0.00418607	UGCAUUG	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr3_+_85008089_85008189	0.00414857	UGCAUUG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr5_+_140235469_140235634	0.0041287	UGCAUUG	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr12_-_56694142_56694178	0.00401911	UGCAUUG	ENST00000550655.1|CS|ENSG00000062485.14|citrate synthase 	ENST00000548567.1|CS|ENSG00000062485.14|citrate synthase 	ENST00000551430.2|CS|ENSG00000062485.14|citrate synthase 	ENST00000351328.3|CS|ENSG00000062485.14|citrate synthase
hg19_v2_chr8_+_98656336_98656535	0.003932	UGCAUUG	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr18_-_53255766_53255860	0.00392537	UGCAUUG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr5_-_108745689_108745712	0.00385243	UGCAUUG	ENST00000361189.2|PJA2|ENSG00000198961.5|praja ring finger 2, E3 ubiquitin protein ligase
hg19_v2_chr6_+_34433844_34433921	0.0036729	UGCAUUG	ENST00000244458.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1 	ENST00000374043.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1
hg19_v2_chr4_-_25864581_25864621	0.00360277	UGCAUUG	ENST00000399878.3|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
hg19_v2_chr10_+_64564469_64564535	0.00354697	UGCAUUG	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr12_+_69864129_69864222	0.00350726	UGCAUUG	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr6_-_8064567_8064652	0.00350423	UGCAUUG	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr16_+_67880574_67880635	0.00338832	UGCAUUG	ENST00000219169.4|NUTF2|ENSG00000102898.7|nuclear transport factor 2
hg19_v2_chr2_-_99552620_99552722	0.00334005	UGCAUUG	ENST00000428096.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000397899.2|KIAA1211L|ENSG00000196872.6|KIAA1211-like 	ENST00000420294.1|KIAA1211L|ENSG00000196872.6|KIAA1211-like
hg19_v2_chr7_-_26578407_26578451	0.00331807	UGCAUUG	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chr7_-_124405681_124405709	0.00330298	UGCAUUG	ENST00000303921.2|GPR37|ENSG00000170775.2|G protein-coupled receptor 37 (endothelin receptor type B-like)
hg19_v2_chr19_+_34919257_34919332	0.00329082	UGCAUUG	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr20_-_32700075_32700138	0.00327674	UGCAUUG	ENST00000374980.2|EIF2S2|ENSG00000125977.6|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
hg19_v2_chr1_-_84464780_84464862	0.00325638	UGCAUUG	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr8_-_71316021_71316068	0.00323514	UGCAUUG	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr10_+_11206925_11206993	0.00321621	UGCAUUG	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr17_+_44668035_44668100	0.00319386	UGCAUUG	ENST00000398238.4|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor 	ENST00000225282.8|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr7_+_104654623_104654669	0.00315206	UGCAUUG	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr5_+_140227048_140227048	0.00311276	UGCAUUG	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr7_-_71801980_71802013	0.00301556	UGCAUUG	ENST00000329008.5|CALN1|ENSG00000183166.6|calneuron 1
hg19_v2_chr18_+_13218769_13218792	0.00300777	UGCAUUG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr5_+_140180635_140180783	0.00300168	UGCAUUG	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr10_+_101088836_101088861	0.00298475	UGCAUUG	ENST00000356713.4|CNNM1|ENSG00000119946.9|cyclin M1
hg19_v2_chr5_+_140261703_140261854	0.00297651	UGCAUUG	ENST00000409494.1|PCDHA13|ENSG00000239389.3|protocadherin alpha 13 	ENST00000289272.2|PCDHA13|ENSG00000239389.3|protocadherin alpha 13
hg19_v2_chr1_+_114472222_114472377	0.00296232	UGCAUUG	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr7_-_83824169_83824217	0.0029516	UGCAUUG	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr6_-_74230741_74230799	0.00295068	UGCAUUG	ENST00000316292.9|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr5_+_60628074_60628100	0.00294844	UGCAUUG	ENST00000252744.5|ZSWIM6|ENSG00000130449.5|zinc finger, SWIM-type containing 6
hg19_v2_chr12_+_2162447_2162464	0.00293025	UGCAUUG	ENST00000335762.5|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit 	ENST00000399655.1|CACNA1C|ENSG00000151067.16|calcium channel, voltage-dependent, L type, alpha 1C subunit
hg19_v2_chr1_-_160254913_160254943	0.0029112	UGCAUUG	ENST00000440949.3|PEX19|ENSG00000162735.14|peroxisomal biogenesis factor 19 	ENST00000608310.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000556710.1|DCAF8|ENSG00000258465.2|DDB1- and CUL4-associated factor 8  	ENST00000368072.5|PEX19|ENSG00000162735.14|peroxisomal biogenesis factor 19
hg19_v2_chr21_-_46707793_46707815	0.00282714	UGCAUUG	ENST00000331343.7|POFUT2|ENSG00000186866.12|protein O-fucosyltransferase 2 	ENST00000349485.5|POFUT2|ENSG00000186866.12|protein O-fucosyltransferase 2
hg19_v2_chr1_+_22889953_22890070	0.00280542	UGCAUUG	ENST00000374644.4|EPHA8|ENSG00000070886.6|EPH receptor A8 	ENST00000166244.3|EPHA8|ENSG00000070886.6|EPH receptor A8 	ENST00000538803.1|EPHA8|ENSG00000070886.6|EPH receptor A8
hg19_v2_chr20_+_44657845_44657902	0.00267354	UGCAUUG	ENST00000243964.3|SLC12A5|ENSG00000124140.8|solute carrier family 12 (potassium/chloride transporter), member 5
hg19_v2_chr14_+_53196872_53196959	0.00267016	UGCAUUG	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr2_-_208030647_208030689	0.00255514	UGCAUUG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr7_-_105517021_105517050	0.00255227	UGCAUUG	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr2_-_26101374_26101389	0.00252959	UGCAUUG	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr12_+_51985001_51985037	0.00251393	UGCAUUG	ENST00000354534.6|SCN8A|ENSG00000196876.9|sodium channel, voltage gated, type VIII, alpha subunit
hg19_v2_chrX_-_53310791_53310816	0.00246645	UGCAUUG	ENST00000375365.2|IQSEC2|ENSG00000124313.8|IQ motif and Sec7 domain 2
hg19_v2_chr14_+_55738021_55738176	0.0024475	UGCAUUG	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr12_+_57984965_57985059	0.00234546	UGCAUUG	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr8_+_77593448_77593471	0.00233938	UGCAUUG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr10_+_75757863_75757897	0.00232515	UGCAUUG	ENST00000372755.3|VCL|ENSG00000035403.12|vinculin 	ENST00000211998.4|VCL|ENSG00000035403.12|vinculin 	ENST00000417648.2|VCL|ENSG00000035403.12|vinculin
hg19_v2_chr5_+_31193847_31193887	0.00231169	UGCAUUG	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr5_+_140201183_140201361	0.00228437	UGCAUUG	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr16_-_69419871_69419927	0.00225249	UGCAUUG	ENST00000603068.1|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000254942.3|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2 	ENST00000567296.2|TERF2|ENSG00000132604.6|telomeric repeat binding factor 2
hg19_v2_chr10_-_119134918_119134986	0.00224986	UGCAUUG	ENST00000334464.5|PDZD8|ENSG00000165650.7|PDZ domain containing 8
hg19_v2_chr19_+_1752372_1752372	0.00217665	UGCAUUG	ENST00000382349.4|ONECUT3|ENSG00000205922.4|one cut homeobox 3
hg19_v2_chr8_+_106330920_106330979	0.00215559	UGCAUUG	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr11_-_790060_790127	0.00210143	UGCAUUG	ENST00000330106.4|CEND1|ENSG00000184524.5|cell cycle exit and neuronal differentiation 1
hg19_v2_chr11_+_20620946_20620946	0.00203424	UGCAUUG	ENST00000525748.1|SLC6A5|ENSG00000165970.7|solute carrier family 6 (neurotransmitter transporter), member 5
hg19_v2_chr11_+_14665263_14665274	0.00202865	UGCAUUG	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr14_-_99737565_99737617	0.00202119	UGCAUUG	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr12_-_104532062_104532071	0.00199137	UGCAUUG	ENST00000240055.3|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr7_+_8008418_8008443	0.00198991	UGCAUUG	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr12_+_70636765_70636817	0.00198333	UGCAUUG	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr17_-_80231557_80231607	0.00194372	UGCAUUG	ENST00000392334.2|CSNK1D|ENSG00000141551.10|casein kinase 1, delta 	ENST00000314028.6|CSNK1D|ENSG00000141551.10|casein kinase 1, delta
hg19_v2_chr20_-_62462566_62462631	0.00191073	UGCAUUG	ENST00000245663.4|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46 	ENST00000302995.2|ZBTB46|ENSG00000130584.6|zinc finger and BTB domain containing 46
hg19_v2_chr10_-_75634260_75634321	0.0019063	UGCAUUG	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr8_-_93115445_93115462	0.0018965	UGCAUUG	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr4_+_2845547_2845654	0.00178021	UGCAUUG	ENST00000264758.7|ADD1|ENSG00000087274.12|adducin 1 (alpha) 	ENST00000446856.1|ADD1|ENSG00000087274.12|adducin 1 (alpha) 	ENST00000398125.1|ADD1|ENSG00000087274.12|adducin 1 (alpha)
hg19_v2_chr1_-_217262969_217262995	0.00170503	UGCAUUG	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr17_-_1359443_1359553	0.00168023	UGCAUUG	ENST00000574295.1|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000398970.5|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000300574.2|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog
hg19_v2_chr6_+_101846664_101846702	0.00166636	UGCAUUG	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr3_+_77088989_77089037	0.00161686	UGCAUUG	ENST00000461745.1|ROBO2|ENSG00000185008.13|roundabout, axon guidance receptor, homolog 2 (Drosophila)
hg19_v2_chr5_+_140186647_140186773	0.00159137	UGCAUUG	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr4_-_73434498_73434516	0.00158051	UGCAUUG	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr17_+_61699766_61699826	0.00149172	UGCAUUG	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr5_+_42423872_42424026	0.00146986	UGCAUUG	ENST00000230882.4|GHR|ENSG00000112964.9|growth hormone receptor 	ENST00000357703.3|GHR|ENSG00000112964.9|growth hormone receptor
hg19_v2_chr16_+_21610797_21610850	0.00141668	UGCAUUG	ENST00000358154.3|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr5_+_63461642_63461722	0.00140974	UGCAUUG	ENST00000296615.6|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000381081.2|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000389100.4|RNF180|ENSG00000164197.7|ring finger protein 180
hg19_v2_chr16_-_3930724_3930735	0.00140817	UGCAUUG	ENST00000262367.5|CREBBP|ENSG00000005339.8|CREB binding protein
hg19_v2_chr9_+_77112244_77112281	0.00137882	UGCAUUG	ENST00000376896.3|RORB|ENSG00000198963.6|RAR-related orphan receptor B
hg19_v2_chr2_-_86564776_86564813	0.00133061	UGCAUUG	ENST00000165698.5|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000541910.1|REEP1|ENSG00000068615.12|receptor accessory protein 1 	ENST00000535845.1|REEP1|ENSG00000068615.12|receptor accessory protein 1
hg19_v2_chr2_-_9143786_9143942	0.00132656	UGCAUUG	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr5_+_74632993_74633028	0.00130455	UGCAUUG	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr3_-_182698381_182698431	0.00129964	UGCAUUG	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr1_+_110527308_110527349	0.00129881	UGCAUUG	ENST00000369799.5|AHCYL1|ENSG00000168710.13|adenosylhomocysteinase-like 1
hg19_v2_chr3_+_173116225_173116242	0.00129137	UGCAUUG	ENST00000457714.1|NLGN1|ENSG00000169760.13|neuroligin 1
hg19_v2_chr10_-_62149433_62149488	0.00127206	UGCAUUG	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr18_+_72922710_72922733	0.00127197	UGCAUUG	ENST00000322038.5|TSHZ1|ENSG00000179981.9|teashirt zinc finger homeobox 1
hg19_v2_chr11_+_120894781_120894840	0.00126996	UGCAUUG	ENST00000529397.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000528512.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000422003.2|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like
hg19_v2_chr7_+_138916231_138916231	0.00123076	UGCAUUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr1_-_160232197_160232284	0.00115496	UGCAUUG	ENST00000419626.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000610139.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000475733.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000407642.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000368073.3|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8 	ENST00000326837.2|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr14_+_93897199_93897222	0.0011349	UGCAUUG	ENST00000553484.1|UNC79|ENSG00000133958.9|unc-79 homolog (C. elegans)
hg19_v2_chr18_+_55102917_55102985	0.00113114	UGCAUUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr8_-_103425047_103425069	0.000966488	UGCAUUG	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr3_-_15106747_15106842	0.000943232	UGCAUUG	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr2_-_200322723_200322819	0.00091638	UGCAUUG	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr14_+_71374122_71374193	0.00090107	UGCAUUG	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr4_-_85887503_85887544	0.000859947	UGCAUUG	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr7_+_115850547_115850626	0.000812817	UGCAUUG	ENST00000358204.4|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000455989.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains) 	ENST00000537767.1|TES|ENSG00000135269.13|testis derived transcript (3 LIM domains)
hg19_v2_chr11_+_18230727_18230755	0.000812131	UGCAUUG	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr1_+_145611010_145611046	0.000757643	UGCAUUG	ENST00000369291.5|RNF115|ENSG00000121848.9|ring finger protein 115
hg19_v2_chr5_-_133512683_133512729	0.000736686	UGCAUUG	ENST00000353411.6|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr2_+_24714729_24714927	0.000683625	UGCAUUG	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr5_+_140174429_140174550	0.000600972	UGCAUUG	ENST00000520672.2|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000378132.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000526136.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2
hg19_v2_chr20_+_13976015_13976171	0.000587205	UGCAUUG	ENST00000217246.4|MACROD2|ENSG00000172264.12|MACRO domain containing 2
hg19_v2_chr3_+_38206975_38207101	0.00057353	UGCAUUG	ENST00000446845.1|OXSR1|ENSG00000172939.4|oxidative stress responsive 1 	ENST00000311806.3|OXSR1|ENSG00000172939.4|oxidative stress responsive 1
hg19_v2_chr1_-_119532127_119532179	0.000519061	UGCAUUG	ENST00000207157.3|TBX15|ENSG00000092607.9|T-box 15
hg19_v2_chr12_+_122516626_122516645	0.000518689	UGCAUUG	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr5_+_143584814_143584840	0.000496821	UGCAUUG	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr6_+_163835669_163835693	0.0004719	UGCAUUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr10_-_5855350_5855512	0.000460023	UGCAUUG	ENST00000456041.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380181.3|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000418688.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380132.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000609712.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380191.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2
hg19_v2_chr21_+_38071430_38071456	0.000412462	UGCAUUG	ENST00000290399.6|SIM2|ENSG00000159263.11|single-minded family bHLH transcription factor 2
hg19_v2_chr2_+_86947296_86947434	0.000337115	UGCAUUG	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr4_+_55095264_55095390	0.0003154	UGCAUUG	ENST00000257290.5|PDGFRA|ENSG00000134853.7|platelet-derived growth factor receptor, alpha polypeptide
hg19_v2_chr2_-_166930131_166930149	0.000286267	UGCAUUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr9_+_130830451_130830572	0.000281989	UGCAUUG	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr12_+_101188547_101188585	0.000248242	UGCAUUG	ENST00000546991.1|ANO4|ENSG00000151572.12|anoctamin 4 	ENST00000392979.3|ANO4|ENSG00000151572.12|anoctamin 4
hg19_v2_chr15_-_77924689_77924832	0.000236471	UGCAUUG	ENST00000355300.6|LINGO1|ENSG00000169783.8|leucine rich repeat and Ig domain containing 1
hg19_v2_chr5_-_37839782_37839788	0.000233366	UGCAUUG	ENST00000326524.2|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor 	ENST00000515058.1|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor
hg19_v2_chr15_+_79724858_79724858	0.000231975	UGCAUUG	ENST00000305428.3|KIAA1024|ENSG00000169330.4|KIAA1024
hg19_v2_chr9_-_124989804_124989865	0.000221606	UGCAUUG	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr1_+_181452678_181452716	0.000200956	UGCAUUG	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr13_-_72441315_72441454	0.000200796	UGCAUUG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr2_+_56411131_56411258	0.000188403	UGCAUUG	ENST00000407595.2|CCDC85A|ENSG00000055813.5|coiled-coil domain containing 85A
hg19_v2_chr9_-_73736511_73736546	0.00017424	UGCAUUG	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr17_-_58469474_58469511	0.000163405	UGCAUUG	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr1_-_247495045_247495177	0.000153889	UGCAUUG	ENST00000294753.4|ZNF496|ENSG00000162714.8|zinc finger protein 496 	ENST00000366498.2|ZNF496|ENSG00000162714.8|zinc finger protein 496
hg19_v2_chr4_+_152330390_152330405	0.000137763	UGCAUUG	ENST00000503146.1|FAM160A1|ENSG00000164142.11|family with sequence similarity 160, member A1 	ENST00000435205.1|FAM160A1|ENSG00000164142.11|family with sequence similarity 160, member A1
hg19_v2_chr1_+_10271674_10271674	0.000132827	UGCAUUG	ENST00000377086.1|KIF1B|ENSG00000054523.12|kinesin family member 1B
hg19_v2_chr11_-_40315640_40315684	0.000110994	UGCAUUG	ENST00000278198.2|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chr9_-_104500862_104500940	7.67246e-05	UGCAUUG	ENST00000361820.3|GRIN3A|ENSG00000198785.4|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A
hg19_v2_chr7_+_29234028_29234043	5.2698e-05	UGCAUUG	ENST00000222792.6|CHN2|ENSG00000106069.16|chimerin 2
