hg19_v2_chr5_+_162864575_162864620	0.501242	UCACAUU	ENST00000512163.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000393929.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000340828.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511683.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510097.1|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000511490.2|CCNG1|ENSG00000113328.14|cyclin G1 	ENST00000510664.1|CCNG1|ENSG00000113328.14|cyclin G1
hg19_v2_chr11_-_94964354_94964374	0.460734	UCACAUU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr3_+_88188254_88188254	0.326875	UCACAUU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr12_-_76953284_76953341	0.31047	UCACAUU	ENST00000547544.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8 	ENST00000393249.2|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr2_+_200775971_200775988	0.273969	UCACAUU	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr6_-_166755995_166756091	0.253539	UCACAUU	ENST00000361731.3|SFT2D1|ENSG00000198818.5|SFT2 domain containing 1
hg19_v2_chr13_+_73302047_73302073	0.247979	UCACAUU	ENST00000377814.2|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000377815.3|BORA|ENSG00000136122.11|bora, aurora kinase A activator 	ENST00000390667.5|BORA|ENSG00000136122.11|bora, aurora kinase A activator
hg19_v2_chr4_-_140098339_140098392	0.243608	UCACAUU	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr10_+_89622870_89622870	0.243177	UCACAUU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr8_+_26240414_26240631	0.243158	UCACAUU	ENST00000380629.2|BNIP3L|ENSG00000104765.10|BCL2/adenovirus E1B 19kDa interacting protein 3-like
hg19_v2_chr14_-_35182994_35183034	0.230456	UCACAUU	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr3_+_31574189_31574282	0.217217	UCACAUU	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr5_-_74326724_74326724	0.21453	UCACAUU	ENST00000322348.4|GCNT4|ENSG00000176928.4|glucosaminyl (N-acetyl) transferase 4, core 2
hg19_v2_chr14_-_64010046_64010107	0.205277	UCACAUU	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr3_-_87040233_87040257	0.202656	UCACAUU	ENST00000398399.2|VGLL3|ENSG00000206538.3|vestigial like 3 (Drosophila)
hg19_v2_chr4_-_76439596_76439643	0.196561	UCACAUU	ENST00000451788.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000512706.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr12_+_13197218_13197293	0.193121	UCACAUU	ENST00000197268.8|KIAA1467|ENSG00000084444.9|KIAA1467
hg19_v2_chr4_-_23891693_23891706	0.191698	UCACAUU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr4_-_68566832_68566897	0.19169	UCACAUU	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr6_-_82462425_82462491	0.191488	UCACAUU	ENST00000369754.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000320172.6|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A 	ENST00000369756.3|FAM46A|ENSG00000112773.11|family with sequence similarity 46, member A
hg19_v2_chr3_-_182698381_182698431	0.189132	UCACAUU	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr4_-_78740511_78740544	0.188933	UCACAUU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr10_+_60094735_60094749	0.187557	UCACAUU	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr6_+_89790490_89790506	0.183106	UCACAUU	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr12_+_107349497_107349578	0.180903	UCACAUU	ENST00000548125.1|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23 	ENST00000280756.4|C12orf23|ENSG00000151135.5|chromosome 12 open reading frame 23
hg19_v2_chr2_-_172017343_172017391	0.178394	UCACAUU	ENST00000431350.2|TLK1|ENSG00000198586.9|tousled-like kinase 1 	ENST00000360843.3|TLK1|ENSG00000198586.9|tousled-like kinase 1
hg19_v2_chr2_-_102003987_102004057	0.17821	UCACAUU	ENST00000324768.5|CREG2|ENSG00000175874.5|cellular repressor of E1A-stimulated genes 2
hg19_v2_chr3_-_18466787_18466861	0.175262	UCACAUU	ENST00000338745.6|SATB1|ENSG00000182568.12|SATB homeobox 1 	ENST00000450898.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr6_+_114178512_114178586	0.174539	UCACAUU	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr1_+_78470530_78470551	0.173929	UCACAUU	ENST00000370763.5|DNAJB4|ENSG00000162616.8|DnaJ (Hsp40) homolog, subfamily B, member 4
hg19_v2_chr1_-_68962782_68962801	0.173611	UCACAUU	ENST00000456315.2|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chrX_-_83757399_83757487	0.172059	UCACAUU	ENST00000373177.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000297977.5|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000506585.2|HDX|ENSG00000165259.9|highly divergent homeobox 	ENST00000449553.2|HDX|ENSG00000165259.9|highly divergent homeobox
hg19_v2_chr2_-_183903133_183903210	0.171817	UCACAUU	ENST00000361354.4|NCKAP1|ENSG00000061676.10|NCK-associated protein 1
hg19_v2_chr6_+_87865262_87865339	0.166655	UCACAUU	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr10_-_60027642_60027705	0.165785	UCACAUU	ENST00000373935.3|IPMK|ENSG00000151151.5|inositol polyphosphate multikinase
hg19_v2_chr10_+_103986085_103986085	0.165517	UCACAUU	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr1_+_154377669_154377699	0.162987	UCACAUU	ENST00000368485.3|IL6R|ENSG00000160712.8|interleukin 6 receptor 	ENST00000344086.4|IL6R|ENSG00000160712.8|interleukin 6 receptor
hg19_v2_chr1_+_198126093_198126207	0.160207	UCACAUU	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr3_-_113465065_113465147	0.159815	UCACAUU	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr21_-_40685477_40685496	0.157271	UCACAUU	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr13_+_80055284_80055295	0.157224	UCACAUU	ENST00000218652.7|NDFIP2|ENSG00000102471.9|Nedd4 family interacting protein 2
hg19_v2_chr4_-_76598296_76598318	0.157176	UCACAUU	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr11_-_76091986_76092038	0.154341	UCACAUU	ENST00000260045.3|PRKRIR|ENSG00000137492.3|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
hg19_v2_chr7_+_114562172_114562243	0.153889	UCACAUU	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr7_+_90032667_90032793	0.153522	UCACAUU	ENST00000496677.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000287916.4|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000535571.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394604.1|CLDN12|ENSG00000157224.11|claudin 12 	ENST00000394605.2|CLDN12|ENSG00000157224.11|claudin 12
hg19_v2_chr6_+_117002339_117002400	0.149781	UCACAUU	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr6_-_46138676_46138726	0.147323	UCACAUU	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr4_+_144257915_144258009	0.145729	UCACAUU	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr4_+_38665810_38665827	0.143048	UCACAUU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr11_-_96076334_96076419	0.142973	UCACAUU	ENST00000524717.1|MAML2|ENSG00000184384.9|mastermind-like 2 (Drosophila)
hg19_v2_chrX_-_135056216_135056227	0.137977	UCACAUU	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr17_+_45608430_45608490	0.137629	UCACAUU	ENST00000322157.4|NPEPPS|ENSG00000141279.11|aminopeptidase puromycin sensitive
hg19_v2_chrX_+_9754461_9754496	0.13416	UCACAUU	ENST00000380913.3|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr3_+_69812877_69812962	0.133982	UCACAUU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr10_+_72164135_72164135	0.133509	UCACAUU	ENST00000373218.4|EIF4EBP2|ENSG00000148730.6|eukaryotic translation initiation factor 4E binding protein 2
hg19_v2_chr11_-_130184555_130184581	0.130293	UCACAUU	ENST00000525842.1|ZBTB44|ENSG00000196323.7|zinc finger and BTB domain containing 44
hg19_v2_chr1_-_46598284_46598356	0.130047	UCACAUU	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr13_-_79233314_79233331	0.127442	UCACAUU	ENST00000282003.6|RNF219|ENSG00000152193.7|ring finger protein 219
hg19_v2_chr9_-_123639600_123639627	0.126938	UCACAUU	ENST00000373896.3|PHF19|ENSG00000119403.9|PHD finger protein 19
hg19_v2_chr5_+_82767284_82767310	0.12616	UCACAUU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr10_+_93558069_93558154	0.125781	UCACAUU	ENST00000371627.4|TNKS2|ENSG00000107854.5|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
hg19_v2_chr14_+_37131058_37131139	0.125316	UCACAUU	ENST00000361487.6|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr11_+_32914579_32914724	0.125278	UCACAUU	ENST00000399302.2|QSER1|ENSG00000060749.10|glutamine and serine rich 1
hg19_v2_chr4_+_140222609_140222742	0.125262	UCACAUU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr2_+_112812778_112812800	0.12468	UCACAUU	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chr5_-_136834982_136835037	0.124314	UCACAUU	ENST00000510689.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 	ENST00000394945.1|SPOCK1|ENSG00000152377.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
hg19_v2_chr16_-_79634595_79634620	0.122282	UCACAUU	ENST00000326043.4|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 	ENST00000393350.1|MAF|ENSG00000178573.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
hg19_v2_chr14_+_39735411_39735502	0.120949	UCACAUU	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr12_+_69004619_69004699	0.120369	UCACAUU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr14_-_39639523_39639617	0.118232	UCACAUU	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr3_+_187930719_187930729	0.117476	UCACAUU	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr14_-_57735528_57735726	0.117068	UCACAUU	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chrX_-_6146876_6146924	0.115857	UCACAUU	ENST00000381095.3|NLGN4X|ENSG00000146938.10|neuroligin 4, X-linked
hg19_v2_chr14_-_91282726_91282804	0.114461	UCACAUU	ENST00000328459.6|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B 	ENST00000357056.2|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B
hg19_v2_chr12_-_88974236_88974256	0.113696	UCACAUU	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr1_+_185126291_185126307	0.111814	UCACAUU	ENST00000367500.4|SWT1|ENSG00000116668.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v2_chr7_+_94139105_94139197	0.110742	UCACAUU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr15_+_52043758_52043809	0.110684	UCACAUU	ENST00000249700.4|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal) 	ENST00000539962.2|TMOD2|ENSG00000128872.5|tropomodulin 2 (neuronal)
hg19_v2_chr10_-_95462265_95462378	0.109466	UCACAUU	ENST00000536233.1|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000359204.4|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000371430.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1 	ENST00000394100.2|FRA10AC1|ENSG00000148690.10|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1
hg19_v2_chr2_-_175113301_175113426	0.107028	UCACAUU	ENST00000344357.5|OLA1|ENSG00000138430.11|Obg-like ATPase 1 	ENST00000284719.3|OLA1|ENSG00000138430.11|Obg-like ATPase 1
hg19_v2_chr11_+_86748863_86748948	0.105826	UCACAUU	ENST00000340353.7|TMEM135|ENSG00000166575.12|transmembrane protein 135
hg19_v2_chr8_-_28243934_28243993	0.105805	UCACAUU	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr8_-_103876965_103877012	0.105592	UCACAUU	ENST00000337198.5|AZIN1|ENSG00000155096.9|antizyme inhibitor 1
hg19_v2_chr9_+_100263912_100263988	0.104728	UCACAUU	ENST00000259365.4|TMOD1|ENSG00000136842.9|tropomodulin 1
hg19_v2_chr9_+_4490394_4490446	0.104651	UCACAUU	ENST00000262352.3|SLC1A1|ENSG00000106688.7|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1
hg19_v2_chr7_-_95225768_95225967	0.10377	UCACAUU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr5_+_118407053_118407239	0.102771	UCACAUU	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr1_-_150669500_150669602	0.102716	UCACAUU	ENST00000271732.3|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr8_-_8751068_8751158	0.102588	UCACAUU	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr12_-_104234966_104234984	0.102483	UCACAUU	ENST00000392876.3|NT5DC3|ENSG00000111696.7|5'-nucleotidase domain containing 3
hg19_v2_chr7_+_73082152_73082223	0.100934	UCACAUU	ENST00000324941.4|VPS37D|ENSG00000176428.5|vacuolar protein sorting 37 homolog D (S. cerevisiae) 	ENST00000451519.1|VPS37D|ENSG00000176428.5|vacuolar protein sorting 37 homolog D (S. cerevisiae)
hg19_v2_chr14_-_53162361_53162513	0.0997707	UCACAUU	ENST00000395686.3|ERO1L|ENSG00000197930.8|ERO1-like (S. cerevisiae)
hg19_v2_chr3_-_28390581_28390618	0.0995522	UCACAUU	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr4_-_185395672_185395734	0.0988273	UCACAUU	ENST00000393593.3|IRF2|ENSG00000168310.6|interferon regulatory factor 2
hg19_v2_chr12_-_46662772_46662835	0.0983361	UCACAUU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr5_+_65222299_65222361	0.0965606	UCACAUU	ENST00000284037.5|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr14_+_60715928_60716007	0.0962472	UCACAUU	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chrX_-_132549506_132549526	0.0953881	UCACAUU	ENST00000370828.3|GPC4|ENSG00000076716.7|glypican 4
hg19_v2_chr14_+_74318513_74318562	0.0952832	UCACAUU	ENST00000555228.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2 	ENST00000555661.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2
hg19_v2_chr12_+_32655048_32655108	0.0948251	UCACAUU	ENST00000427716.2|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4 	ENST00000266482.3|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chrX_-_30885319_30885319	0.0941983	UCACAUU	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr6_+_110501344_110501412	0.0940875	UCACAUU	ENST00000368932.1|CDC40|ENSG00000168438.10|cell division cycle 40
hg19_v2_chr7_+_27779714_27779819	0.0935824	UCACAUU	ENST00000265393.6|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000409980.1|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000433216.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1 	ENST00000396319.2|TAX1BP1|ENSG00000106052.9|Tax1 (human T-cell leukemia virus type I) binding protein 1
hg19_v2_chr2_-_208634287_208634439	0.0934768	UCACAUU	ENST00000295417.3|FZD5|ENSG00000163251.3|frizzled family receptor 5
hg19_v2_chr12_-_42538657_42538720	0.0933069	UCACAUU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr3_-_88108192_88108203	0.0922864	UCACAUU	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr19_-_56092187_56092248	0.0919258	UCACAUU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr10_-_101989315_101989376	0.0916142	UCACAUU	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr18_+_67956135_67956144	0.0908821	UCACAUU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr2_-_55844720_55844772	0.0896859	UCACAUU	ENST00000345102.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000272313.5|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium) 	ENST00000407823.3|SMEK2|ENSG00000138041.11|SMEK homolog 2, suppressor of mek1 (Dictyostelium)
hg19_v2_chr8_-_91658303_91658327	0.0888442	UCACAUU	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr20_+_49348081_49348096	0.0886312	UCACAUU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr11_+_34073195_34073266	0.0878489	UCACAUU	ENST00000341394.4|CAPRIN1|ENSG00000135387.15|cell cycle associated protein 1
hg19_v2_chrX_+_16804544_16804613	0.0866418	UCACAUU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr10_-_16563870_16564004	0.0860055	UCACAUU	ENST00000298943.3|C1QL3|ENSG00000165985.8|complement component 1, q subcomponent-like 3
hg19_v2_chr4_-_125633876_125633897	0.0856357	UCACAUU	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr2_-_201936302_201936416	0.0845985	UCACAUU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr10_-_65225722_65225755	0.0840831	UCACAUU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr2_-_228028829_228028858	0.0825907	UCACAUU	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr12_-_93323013_93323112	0.0824241	UCACAUU	ENST00000322349.8|EEA1|ENSG00000102189.12|early endosome antigen 1
hg19_v2_chr15_-_52861394_52861436	0.0821201	UCACAUU	ENST00000563277.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa 	ENST00000566423.1|ARPP19|ENSG00000128989.6|cAMP-regulated phosphoprotein, 19kDa
hg19_v2_chr12_-_100536608_100536667	0.0819823	UCACAUU	ENST00000356828.3|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like 	ENST00000279907.7|UHRF1BP1L|ENSG00000111647.8|UHRF1 binding protein 1-like
hg19_v2_chr3_+_5163905_5164039	0.0819248	UCACAUU	ENST00000256496.3|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B 	ENST00000419534.2|ARL8B|ENSG00000134108.8|ADP-ribosylation factor-like 8B
hg19_v2_chr12_+_104682496_104682651	0.0818666	UCACAUU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr9_+_91003271_91003386	0.0809667	UCACAUU	ENST00000375859.3|SPIN1|ENSG00000106723.12|spindlin 1 	ENST00000541629.1|SPIN1|ENSG00000106723.12|spindlin 1
hg19_v2_chr2_+_128458514_128458597	0.0795711	UCACAUU	ENST00000310981.4|SFT2D3|ENSG00000173349.4|SFT2 domain containing 3
hg19_v2_chr10_+_90750378_90750444	0.0794102	UCACAUU	ENST00000355740.2|FAS|ENSG00000026103.15|Fas cell surface death receptor 	ENST00000352159.4|FAS|ENSG00000026103.15|Fas cell surface death receptor
hg19_v2_chr2_+_159313452_159313624	0.0792982	UCACAUU	ENST00000389757.3|PKP4|ENSG00000144283.17|plakophilin 4 	ENST00000389759.3|PKP4|ENSG00000144283.17|plakophilin 4
hg19_v2_chr1_+_164528866_164528877	0.0772447	UCACAUU	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr5_+_112312416_112312440	0.0755541	UCACAUU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr4_-_25162188_25162208	0.0750355	UCACAUU	ENST00000302922.3|SEPSECS|ENSG00000109618.7|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase
hg19_v2_chr7_+_30323923_30324060	0.0745666	UCACAUU	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr14_+_74960423_74960479	0.0743987	UCACAUU	ENST00000556816.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000298818.8|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2 	ENST00000554924.1|ISCA2|ENSG00000165898.9|iron-sulfur cluster assembly 2
hg19_v2_chr14_-_61190754_61190852	0.0741612	UCACAUU	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr4_-_103748880_103749047	0.0738046	UCACAUU	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr6_-_116381918_116381977	0.0734112	UCACAUU	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr4_+_154387480_154387536	0.0732218	UCACAUU	ENST00000409663.3|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000440693.1|KIAA0922|ENSG00000121210.11|KIAA0922 	ENST00000409959.3|KIAA0922|ENSG00000121210.11|KIAA0922
hg19_v2_chr17_+_28705921_28706000	0.0726472	UCACAUU	ENST00000225719.4|CPD|ENSG00000108582.7|carboxypeptidase D
hg19_v2_chr1_-_229478236_229478308	0.072532	UCACAUU	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr5_-_73937244_73937274	0.0719371	UCACAUU	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr1_-_120190396_120190396	0.0714074	UCACAUU	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr2_+_178977143_178977211	0.0712828	UCACAUU	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr10_-_70166946_70166950	0.0711995	UCACAUU	ENST00000388768.2|RUFY2|ENSG00000204130.8|RUN and FYVE domain containing 2
hg19_v2_chr1_+_162467595_162467655	0.0709626	UCACAUU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr15_-_31283798_31283851	0.0705545	UCACAUU	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr2_+_207139367_207139452	0.0700128	UCACAUU	ENST00000374423.3|ZDBF2|ENSG00000204186.3|zinc finger, DBF-type containing 2
hg19_v2_chr9_+_33817461_33817565	0.0699239	UCACAUU	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr3_-_138553594_138553684	0.0686136	UCACAUU	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr2_-_54087066_54087297	0.0677242	UCACAUU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr4_+_155665123_155665158	0.0671925	UCACAUU	ENST00000336356.3|LRAT|ENSG00000121207.7|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)
hg19_v2_chr10_+_93683519_93683594	0.0670683	UCACAUU	ENST00000265990.6|BTAF1|ENSG00000095564.9|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa
hg19_v2_chr17_+_25799008_25799036	0.066859	UCACAUU	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr9_+_129567282_129567353	0.0660107	UCACAUU	ENST00000449886.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000373464.4|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43 	ENST00000450858.1|ZBTB43|ENSG00000169155.5|zinc finger and BTB domain containing 43
hg19_v2_chr4_+_41937131_41937211	0.0657939	UCACAUU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr2_+_60983361_60983418	0.0656051	UCACAUU	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr17_-_40428359_40428462	0.0648634	UCACAUU	ENST00000293328.3|STAT5B|ENSG00000173757.5|signal transducer and activator of transcription 5B
hg19_v2_chr7_-_123197733_123197890	0.0647929	UCACAUU	ENST00000470123.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 	ENST00000471770.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr7_+_99036543_99036696	0.0643721	UCACAUU	ENST00000436336.2|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa 	ENST00000451876.1|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa 	ENST00000292476.5|CPSF4|ENSG00000160917.10|cleavage and polyadenylation specific factor 4, 30kDa
hg19_v2_chr7_-_112430647_112430776	0.0643084	UCACAUU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr2_-_47168906_47168994	0.0641663	UCACAUU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr14_+_39736299_39736412	0.0631484	UCACAUU	ENST00000341502.5|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000396158.2|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000280083.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr3_-_72496035_72496069	0.0630335	UCACAUU	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr19_-_55881741_55881837	0.0630093	UCACAUU	ENST00000264563.2|IL11|ENSG00000095752.2|interleukin 11 	ENST00000590625.1|IL11|ENSG00000095752.2|interleukin 11 	ENST00000585513.1|IL11|ENSG00000095752.2|interleukin 11
hg19_v2_chr12_+_22778009_22778112	0.0628024	UCACAUU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr16_-_56485257_56485287	0.0627328	UCACAUU	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chr20_+_47662805_47662907	0.0621315	UCACAUU	ENST00000262982.2|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast) 	ENST00000542325.1|CSE1L|ENSG00000124207.12|CSE1 chromosome segregation 1-like (yeast)
hg19_v2_chr5_-_40755987_40756077	0.061155	UCACAUU	ENST00000337702.4|TTC33|ENSG00000113638.8|tetratricopeptide repeat domain 33
hg19_v2_chr8_-_124553437_124553453	0.0609791	UCACAUU	ENST00000517956.1|FBXO32|ENSG00000156804.3|F-box protein 32 	ENST00000443022.2|FBXO32|ENSG00000156804.3|F-box protein 32
hg19_v2_chr22_-_18111499_18111584	0.0606379	UCACAUU	ENST00000413576.1|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399796.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399798.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000253413.5|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
hg19_v2_chr13_-_31736027_31736064	0.0599594	UCACAUU	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr13_-_50367057_50367142	0.0596766	UCACAUU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr3_-_113233992_113234044	0.0594288	UCACAUU	ENST00000295872.4|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1 	ENST00000480527.1|SPICE1|ENSG00000163611.7|spindle and centriole associated protein 1
hg19_v2_chr12_+_68042495_68042508	0.0578481	UCACAUU	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr5_+_32788945_32788945	0.0570228	UCACAUU	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chr5_-_114961858_114961876	0.0570033	UCACAUU	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr10_+_112631547_112631596	0.0565202	UCACAUU	ENST00000280154.7|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor) 	ENST00000393104.2|PDCD4|ENSG00000150593.11|programmed cell death 4 (neoplastic transformation inhibitor)
hg19_v2_chr14_-_39901618_39901704	0.0564452	UCACAUU	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr4_-_89619386_89619386	0.056115	UCACAUU	ENST00000323061.5|NAP1L5|ENSG00000177432.6|nucleosome assembly protein 1-like 5
hg19_v2_chr10_+_99079008_99079060	0.0555971	UCACAUU	ENST00000371021.3|FRAT1|ENSG00000165879.7|frequently rearranged in advanced T-cell lymphomas
hg19_v2_chr4_-_141677267_141677291	0.055472	UCACAUU	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr16_+_67596310_67596353	0.0554308	UCACAUU	ENST00000264010.4|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein) 	ENST00000401394.1|CTCF|ENSG00000102974.10|CCCTC-binding factor (zinc finger protein)
hg19_v2_chr9_-_135230336_135230398	0.055397	UCACAUU	ENST00000224140.5|SETX|ENSG00000107290.9|senataxin 	ENST00000372169.2|SETX|ENSG00000107290.9|senataxin 	ENST00000393220.1|SETX|ENSG00000107290.9|senataxin
hg19_v2_chr10_+_73724123_73724206	0.0552927	UCACAUU	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr10_+_115438920_115438963	0.0542215	UCACAUU	ENST00000429617.1|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase 	ENST00000369331.4|CASP7|ENSG00000165806.15|caspase 7, apoptosis-related cysteine peptidase
hg19_v2_chr10_-_102046098_102046122	0.0532601	UCACAUU	ENST00000441611.1|BLOC1S2|ENSG00000196072.7|biogenesis of lysosomal organelles complex-1, subunit 2
hg19_v2_chr3_+_9404526_9404782	0.0523777	UCACAUU	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr6_-_136871957_136872006	0.052216	UCACAUU	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr1_+_93913713_93913839	0.0522021	UCACAUU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr7_+_77325738_77325789	0.0520958	UCACAUU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr9_+_102668915_102669024	0.0519924	UCACAUU	ENST00000259400.6|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000531035.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000525640.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000534052.1|STX17|ENSG00000136874.6|syntaxin 17 	ENST00000526607.1|STX17|ENSG00000136874.6|syntaxin 17
hg19_v2_chr15_-_71055878_71055932	0.0519586	UCACAUU	ENST00000322954.6|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v2_chr4_+_159131346_159131401	0.051864	UCACAUU	ENST00000508243.1|TMEM144|ENSG00000164124.6|transmembrane protein 144 	ENST00000296529.6|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr17_-_33814851_33814890	0.051426	UCACAUU	ENST00000449046.1|SLFN12L|ENSG00000205045.4|schlafen family member 12-like 	ENST00000260908.7|SLFN12L|ENSG00000205045.4|schlafen family member 12-like
hg19_v2_chr2_+_163200598_163200667	0.0511416	UCACAUU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr1_+_100503643_100503677	0.0510545	UCACAUU	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr2_+_24714729_24714927	0.0509441	UCACAUU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr13_+_108921977_108922082	0.0502976	UCACAUU	ENST00000430559.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b 	ENST00000375887.4|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chr10_-_119806085_119806114	0.050192	UCACAUU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr12_-_105478339_105478361	0.0501772	UCACAUU	ENST00000424857.2|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2 	ENST00000258494.9|ALDH1L2|ENSG00000136010.9|aldehyde dehydrogenase 1 family, member L2
hg19_v2_chr13_+_20532807_20532841	0.0499809	UCACAUU	ENST00000382869.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2 	ENST00000382881.3|ZMYM2|ENSG00000121741.12|zinc finger, MYM-type 2
hg19_v2_chr6_-_24721054_24721074	0.0494673	UCACAUU	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr2_+_135676381_135676435	0.0493841	UCACAUU	ENST00000537343.1|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000295238.6|CCNT2|ENSG00000082258.8|cyclin T2 	ENST00000264157.5|CCNT2|ENSG00000082258.8|cyclin T2
hg19_v2_chr4_+_128554081_128554121	0.0491	UCACAUU	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr8_+_74206829_74206847	0.0490711	UCACAUU	ENST00000240285.5|RDH10|ENSG00000121039.5|retinol dehydrogenase 10 (all-trans)
hg19_v2_chr12_+_862089_862343	0.0489783	UCACAUU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr9_+_108456800_108456849	0.0488397	UCACAUU	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr20_+_3451650_3451729	0.0486215	UCACAUU	ENST00000262919.5|ATRN|ENSG00000088812.13|attractin
hg19_v2_chr4_-_129208940_129208976	0.048183	UCACAUU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chr7_+_89975979_89976052	0.0476367	UCACAUU	ENST00000257659.8|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000222511.6|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative) 	ENST00000417207.1|GTPBP10|ENSG00000105793.11|GTP-binding protein 10 (putative)
hg19_v2_chr17_+_60704762_60704762	0.0471884	UCACAUU	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr12_+_66217911_66218018	0.047112	UCACAUU	ENST00000403681.2|HMGA2|ENSG00000149948.9|high mobility group AT-hook 2
hg19_v2_chr2_+_28974668_28974729	0.0468766	UCACAUU	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr1_+_180199393_180199426	0.0466289	UCACAUU	ENST00000263726.2|LHX4|ENSG00000121454.4|LIM homeobox 4
hg19_v2_chr2_+_26568965_26569025	0.0460564	UCACAUU	ENST00000260585.7|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific) 	ENST00000447170.1|EPT1|ENSG00000138018.13|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)
hg19_v2_chr11_-_115375107_115375283	0.0460251	UCACAUU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr5_-_133747589_133747603	0.0457552	UCACAUU	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr17_-_49337392_49337465	0.0457502	UCACAUU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr9_+_15553055_15553101	0.0455152	UCACAUU	ENST00000380701.3|CCDC171|ENSG00000164989.11|coiled-coil domain containing 171
hg19_v2_chr8_-_81083731_81083813	0.0454823	UCACAUU	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr4_+_170541660_170541677	0.0453489	UCACAUU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr9_-_125027079_125027130	0.0453477	UCACAUU	ENST00000417201.3|RBM18|ENSG00000119446.9|RNA binding motif protein 18
hg19_v2_chr18_+_59854480_59854551	0.0451269	UCACAUU	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr2_+_120517174_120517207	0.0450774	UCACAUU	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr1_+_244214577_244214593	0.0450079	UCACAUU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr8_-_94753229_94753263	0.0447887	UCACAUU	ENST00000518597.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000399300.2|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000517700.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr4_+_166248775_166248901	0.0444065	UCACAUU	ENST00000261507.6|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000507013.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000393766.2|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1 	ENST00000504317.1|MSMO1|ENSG00000052802.8|methylsterol monooxygenase 1
hg19_v2_chr15_-_37390482_37390572	0.0439352	UCACAUU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr11_-_85780086_85780161	0.0434406	UCACAUU	ENST00000532317.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000528256.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein 	ENST00000526033.1|PICALM|ENSG00000073921.13|phosphatidylinositol binding clathrin assembly protein
hg19_v2_chr1_+_82266053_82266082	0.0432802	UCACAUU	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr4_-_174256276_174256303	0.0432786	UCACAUU	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr2_-_200322723_200322819	0.043269	UCACAUU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr11_+_124609823_124609941	0.0429474	UCACAUU	ENST00000412681.2|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr2_-_224810070_224810104	0.042679	UCACAUU	ENST00000429915.1|WDFY1|ENSG00000085449.10|WD repeat and FYVE domain containing 1 	ENST00000233055.4|WDFY1|ENSG00000085449.10|WD repeat and FYVE domain containing 1
hg19_v2_chr15_+_40532058_40532072	0.0426689	UCACAUU	ENST00000260404.4|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr1_-_225615599_225615802	0.0426245	UCACAUU	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr17_-_3749515_3749551	0.0424679	UCACAUU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr6_+_76458909_76458934	0.0422768	UCACAUU	ENST00000369981.3|MYO6|ENSG00000196586.9|myosin VI 	ENST00000369985.4|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr11_+_75526212_75526301	0.0420234	UCACAUU	ENST00000356136.3|UVRAG|ENSG00000198382.4|UV radiation resistance associated
hg19_v2_chr1_-_214724566_214724566	0.0417787	UCACAUU	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr5_+_50678921_50678921	0.0417391	UCACAUU	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chrX_-_109561294_109561467	0.0416068	UCACAUU	ENST00000372059.2|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 	ENST00000262844.5|AMMECR1|ENSG00000101935.5|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
hg19_v2_chr2_+_170683942_170683972	0.0410953	UCACAUU	ENST00000272793.5|UBR3|ENSG00000144357.12|ubiquitin protein ligase E3 component n-recognin 3 (putative)
hg19_v2_chr5_+_40679584_40679600	0.0410121	UCACAUU	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr13_+_98605902_98605968	0.0405484	UCACAUU	ENST00000460070.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481455.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000261574.5|IPO5|ENSG00000065150.14|importin 5 	ENST00000493281.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000463157.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000471898.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000489058.1|IPO5|ENSG00000065150.14|importin 5 	ENST00000481689.1|IPO5|ENSG00000065150.14|importin 5
hg19_v2_chr12_-_95044309_95044390	0.0401717	UCACAUU	ENST00000261226.4|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr17_+_54911444_54911564	0.0401578	UCACAUU	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr10_+_126490354_126490395	0.0400234	UCACAUU	ENST00000298492.5|FAM175B|ENSG00000165660.7|family with sequence similarity 175, member B
hg19_v2_chr19_-_46974741_46974826	0.039905	UCACAUU	ENST00000313683.10|PNMAL1|ENSG00000182013.13|paraneoplastic Ma antigen family-like 1 	ENST00000602246.1|PNMAL1|ENSG00000182013.13|paraneoplastic Ma antigen family-like 1
hg19_v2_chr12_+_40787194_40787197	0.0396769	UCACAUU	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr12_+_72233487_72233563	0.0395005	UCACAUU	ENST00000482439.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000550746.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000491063.1|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000319106.8|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000485960.2|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15 	ENST00000393309.3|TBC1D15|ENSG00000121749.11|TBC1 domain family, member 15
hg19_v2_chr2_-_37193606_37193633	0.0387838	UCACAUU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr1_-_93645818_93645918	0.0384549	UCACAUU	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr1_+_36396677_36396749	0.0380947	UCACAUU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr8_+_120079478_120079499	0.0379977	UCACAUU	ENST00000332843.2|COLEC10|ENSG00000184374.2|collectin sub-family member 10 (C-type lectin)
hg19_v2_chr3_-_160283348_160283376	0.0379394	UCACAUU	ENST00000334256.4|KPNA4|ENSG00000186432.4|karyopherin alpha 4 (importin alpha 3)
hg19_v2_chr3_-_133380731_133380834	0.037225	UCACAUU	ENST00000260810.5|TOPBP1|ENSG00000163781.8|topoisomerase (DNA) II binding protein 1
hg19_v2_chr12_+_62860581_62860629	0.0370337	UCACAUU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr20_+_62371206_62371224	0.0367567	UCACAUU	ENST00000266077.2|SLC2A4RG|ENSG00000125520.9|SLC2A4 regulator
hg19_v2_chr11_-_66115032_66115163	0.0366692	UCACAUU	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr1_-_114355083_114355123	0.0363245	UCACAUU	ENST00000261441.5|RSBN1|ENSG00000081019.9|round spermatid basic protein 1
hg19_v2_chr6_+_45389893_45389914	0.0359423	UCACAUU	ENST00000371432.3|RUNX2|ENSG00000124813.16|runt-related transcription factor 2
hg19_v2_chr20_-_524455_524466	0.0357915	UCACAUU	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr8_-_18871159_18871201	0.0354387	UCACAUU	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr6_-_137113604_137113666	0.0352692	UCACAUU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr11_+_32112431_32112454	0.034806	UCACAUU	ENST00000054950.3|RCN1|ENSG00000049449.4|reticulocalbin 1, EF-hand calcium binding domain
hg19_v2_chr13_+_43597269_43597339	0.0347651	UCACAUU	ENST00000379221.2|DNAJC15|ENSG00000120675.4|DnaJ (Hsp40) homolog, subfamily C, member 15
hg19_v2_chr14_+_79745746_79745762	0.0347647	UCACAUU	ENST00000281127.7|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr1_+_151584544_151584558	0.0346734	UCACAUU	ENST00000458013.2|SNX27|ENSG00000143376.8|sorting nexin family member 27 	ENST00000368843.3|SNX27|ENSG00000143376.8|sorting nexin family member 27
hg19_v2_chr3_+_107241783_107241850	0.0342724	UCACAUU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr7_-_93633684_93633695	0.0342683	UCACAUU	ENST00000222547.3|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein 	ENST00000425626.1|BET1|ENSG00000105829.7|Bet1 golgi vesicular membrane trafficking protein
hg19_v2_chr18_+_9913977_9914088	0.0341011	UCACAUU	ENST00000400000.2|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 	ENST00000340541.4|VAPA|ENSG00000101558.9|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
hg19_v2_chr7_+_99613195_99613206	0.0339176	UCACAUU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chrX_+_122993827_122993910	0.0337901	UCACAUU	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr3_+_134204881_134204913	0.033144	UCACAUU	ENST00000511574.1|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000337090.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa 	ENST00000383229.3|CEP63|ENSG00000182923.12|centrosomal protein 63kDa
hg19_v2_chr1_-_113161730_113161811	0.0328667	UCACAUU	ENST00000544629.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000543570.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000360743.4|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000490067.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000343210.7|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like 	ENST00000369666.1|ST7L|ENSG00000007341.14|suppression of tumorigenicity 7 like
hg19_v2_chr2_-_225450013_225450068	0.0327543	UCACAUU	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr3_+_101292939_101293063	0.0327312	UCACAUU	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr5_-_107717058_107717155	0.0325494	UCACAUU	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr17_+_34948228_34948357	0.0325272	UCACAUU	ENST00000251312.5|DHRS11|ENSG00000108272.9|dehydrogenase/reductase (SDR family) member 11 	ENST00000590554.1|DHRS11|ENSG00000108272.9|dehydrogenase/reductase (SDR family) member 11
hg19_v2_chr10_+_121652204_121652286	0.0324092	UCACAUU	ENST00000369075.3|SEC23IP|ENSG00000107651.8|SEC23 interacting protein 	ENST00000543134.1|SEC23IP|ENSG00000107651.8|SEC23 interacting protein
hg19_v2_chr7_+_5938351_5938379	0.0323718	UCACAUU	ENST00000325974.6|CCZ1|ENSG00000122674.8|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)
hg19_v2_chr1_-_108742957_108743003	0.0320534	UCACAUU	ENST00000565488.1|SLC25A24|ENSG00000085491.11|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
hg19_v2_chr5_-_178054105_178054119	0.0319832	UCACAUU	ENST00000316308.4|CLK4|ENSG00000113240.8|CDC-like kinase 4
hg19_v2_chrX_-_63425561_63425624	0.0319525	UCACAUU	ENST00000374869.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1 	ENST00000330258.3|AMER1|ENSG00000184675.5|APC membrane recruitment protein 1
hg19_v2_chr10_-_70287231_70287290	0.031887	UCACAUU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr2_+_43864387_43864472	0.0311548	UCACAUU	ENST00000282406.4|PLEKHH2|ENSG00000152527.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
hg19_v2_chr10_+_88516396_88516426	0.0310235	UCACAUU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chrX_-_20284958_20285039	0.0307692	UCACAUU	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr2_+_139259324_139259389	0.030673	UCACAUU	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr3_+_140660634_140660729	0.0296537	UCACAUU	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chrX_-_138914394_138914447	0.0295954	UCACAUU	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr3_+_155588300_155588369	0.0295342	UCACAUU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr2_-_179343268_179343338	0.0293851	UCACAUU	ENST00000424785.2|FKBP7|ENSG00000079150.13|FK506 binding protein 7
hg19_v2_chr2_-_45236540_45236577	0.029094	UCACAUU	ENST00000303077.6|SIX2|ENSG00000170577.7|SIX homeobox 2
hg19_v2_chr1_+_46972668_46972669	0.0286986	UCACAUU	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr14_-_89259080_89259096	0.0286202	UCACAUU	ENST00000554922.1|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5 	ENST00000352093.5|EML5|ENSG00000165521.11|echinoderm microtubule associated protein like 5
hg19_v2_chr1_-_205719295_205719404	0.0279891	UCACAUU	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr4_+_129730779_129730826	0.0278898	UCACAUU	ENST00000226319.6|PHF17|ENSG00000077684.11|jade family PHD finger 1
hg19_v2_chr9_+_114423615_114423661	0.0277799	UCACAUU	ENST00000374293.4|GNG10|ENSG00000242616.3|guanine nucleotide binding protein (G protein), gamma 10
hg19_v2_chr1_+_107599267_107599340	0.0276426	UCACAUU	ENST00000361318.5|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6 	ENST00000370078.1|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6
hg19_v2_chr1_+_200708671_200708744	0.0273986	UCACAUU	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr17_+_43224684_43224684	0.0273368	UCACAUU	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr17_-_58603568_58603610	0.0272615	UCACAUU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr17_+_34900737_34900821	0.0271405	UCACAUU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr17_+_57784826_57784883	0.0270865	UCACAUU	ENST00000262291.4|VMP1|ENSG00000062716.6|vacuole membrane protein 1
hg19_v2_chr1_+_26798955_26799010	0.0270023	UCACAUU	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr3_-_98312548_98312567	0.0269641	UCACAUU	ENST00000264193.2|CPOX|ENSG00000080819.2|coproporphyrinogen oxidase
hg19_v2_chr7_-_127225620_127225679	0.0269301	UCACAUU	ENST00000321407.2|GCC1|ENSG00000179562.2|GRIP and coiled-coil domain containing 1
hg19_v2_chr7_+_116312411_116312502	0.0268333	UCACAUU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr1_-_27816556_27816572	0.0268314	UCACAUU	ENST00000536657.1|WASF2|ENSG00000158195.6|WAS protein family, member 2
hg19_v2_chr4_-_102268628_102268693	0.026645	UCACAUU	ENST00000323055.6|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000512215.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000394854.3|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr8_-_117886955_117887105	0.0266359	UCACAUU	ENST00000297338.2|RAD21|ENSG00000164754.8|RAD21 homolog (S. pombe)
hg19_v2_chr16_+_2587998_2588011	0.0263683	UCACAUU	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr17_-_41977964_41978013	0.0263194	UCACAUU	ENST00000377184.3|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr4_+_128886532_128886576	0.0262438	UCACAUU	ENST00000444616.1|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29 	ENST00000388795.5|C4orf29|ENSG00000164074.10|chromosome 4 open reading frame 29
hg19_v2_chr6_+_10556215_10556240	0.026067	UCACAUU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr5_+_140345820_140345820	0.0260437	UCACAUU	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr3_+_111805182_111805210	0.025863	UCACAUU	ENST00000430855.1|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000431717.2|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52 	ENST00000264848.5|C3orf52|ENSG00000114529.8|chromosome 3 open reading frame 52
hg19_v2_chr5_-_141392538_141392606	0.0256699	UCACAUU	ENST00000503794.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000510194.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504424.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000513454.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000458112.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000542860.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000503229.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000500692.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000311337.6|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504139.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000505689.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1
hg19_v2_chr1_+_33283043_33283198	0.0255286	UCACAUU	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr5_+_149887672_149887698	0.0254013	UCACAUU	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr7_-_87505658_87505717	0.0252968	UCACAUU	ENST00000341119.5|SLC25A40|ENSG00000075303.8|solute carrier family 25, member 40
hg19_v2_chr12_+_19592602_19592648	0.0249598	UCACAUU	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr1_+_61547894_61547980	0.0248245	UCACAUU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chrX_-_41782249_41782287	0.0245859	UCACAUU	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr4_+_17616253_17616275	0.0244136	UCACAUU	ENST00000237380.7|MED28|ENSG00000118579.7|mediator complex subunit 28
hg19_v2_chr7_-_106301405_106301484	0.0243704	UCACAUU	ENST00000523505.1|CCDC71L|ENSG00000253276.1|coiled-coil domain containing 71-like
hg19_v2_chr20_+_60718785_60718853	0.0242057	UCACAUU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chrX_-_19140677_19140760	0.0241018	UCACAUU	ENST00000357544.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379869.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000360279.4|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379873.2|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379878.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000354791.3|GPR64|ENSG00000173698.13|G protein-coupled receptor 64 	ENST00000379876.1|GPR64|ENSG00000173698.13|G protein-coupled receptor 64
hg19_v2_chr15_-_67546963_67547074	0.0240525	UCACAUU	ENST00000561452.1|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein 	ENST00000261880.5|AAGAB|ENSG00000103591.8|alpha- and gamma-adaptin binding protein
hg19_v2_chr11_+_82868030_82868179	0.0240415	UCACAUU	ENST00000298281.4|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit 	ENST00000530660.1|PCF11|ENSG00000165494.6|PCF11 cleavage and polyadenylation factor subunit
hg19_v2_chr8_+_37594130_37594169	0.0238755	UCACAUU	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr7_-_73097741_73097789	0.0232838	UCACAUU	ENST00000395176.2|DNAJC30|ENSG00000176410.7|DnaJ (Hsp40) homolog, subfamily C, member 30
hg19_v2_chr2_+_179345173_179345221	0.0232735	UCACAUU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr17_-_65241281_65241326	0.0224321	UCACAUU	ENST00000358691.5|HELZ|ENSG00000198265.7|helicase with zinc finger 	ENST00000580168.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr6_-_8064567_8064652	0.0222982	UCACAUU	ENST00000543936.1|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted 	ENST00000397457.2|BLOC1S5|ENSG00000188428.12|biogenesis of lysosomal organelles complex-1, subunit 5, muted
hg19_v2_chr9_+_36572851_36572932	0.0220626	UCACAUU	ENST00000298048.2|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000538311.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536987.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000545008.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536860.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000536329.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000541717.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase 	ENST00000543751.1|MELK|ENSG00000165304.3|maternal embryonic leucine zipper kinase
hg19_v2_chr1_+_218458625_218458660	0.022034	UCACAUU	ENST00000366932.3|RRP15|ENSG00000067533.5|ribosomal RNA processing 15 homolog (S. cerevisiae)
hg19_v2_chr17_-_46671323_46671323	0.0219284	UCACAUU	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr10_-_14590644_14590669	0.021919	UCACAUU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr4_+_41992489_41992561	0.0218341	UCACAUU	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr6_+_33387868_33387941	0.0217041	UCACAUU	ENST00000418600.2|SYNGAP1|ENSG00000197283.8|synaptic Ras GTPase activating protein 1
hg19_v2_chr1_+_218519577_218519594	0.0213789	UCACAUU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr10_+_85899196_85899273	0.0211764	UCACAUU	ENST00000372134.3|GHITM|ENSG00000165678.15|growth hormone inducible transmembrane protein
hg19_v2_chr20_+_13202418_13202418	0.0209284	UCACAUU	ENST00000262487.4|ISM1|ENSG00000101230.5|isthmin 1, angiogenesis inhibitor
hg19_v2_chr2_-_101034070_101034147	0.0208725	UCACAUU	ENST00000264249.3|CHST10|ENSG00000115526.6|carbohydrate sulfotransferase 10
hg19_v2_chr2_-_153574480_153574552	0.0207971	UCACAUU	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr6_+_117996621_117996665	0.0205458	UCACAUU	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr8_+_95653373_95653415	0.020403	UCACAUU	ENST00000358397.5|ESRP1|ENSG00000104413.11|epithelial splicing regulatory protein 1
hg19_v2_chr9_+_37485932_37485990	0.0203678	UCACAUU	ENST00000377798.4|POLR1E|ENSG00000137054.11|polymerase (RNA) I polypeptide E, 53kDa 	ENST00000442009.2|POLR1E|ENSG00000137054.11|polymerase (RNA) I polypeptide E, 53kDa
hg19_v2_chr1_+_28099683_28099694	0.0203289	UCACAUU	ENST00000373943.4|STX12|ENSG00000117758.9|syntaxin 12
hg19_v2_chr22_+_45559722_45559881	0.0202722	UCACAUU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr12_-_120554534_120554585	0.020033	UCACAUU	ENST00000538903.1|RAB35|ENSG00000111737.7|RAB35, member RAS oncogene family 	ENST00000534951.1|RAB35|ENSG00000111737.7|RAB35, member RAS oncogene family
hg19_v2_chr15_-_61521495_61521518	0.0197188	UCACAUU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr16_-_68344830_68344859	0.0196973	UCACAUU	ENST00000263997.6|SLC7A6OS|ENSG00000103061.7|solute carrier family 7, member 6 opposite strand
hg19_v2_chr20_-_17949363_17949454	0.0194023	UCACAUU	ENST00000377759.4|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606557.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000606602.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000486039.1|SNX5|ENSG00000089006.12|sorting nexin 5 	ENST00000481323.1|SNX5|ENSG00000089006.12|sorting nexin 5
hg19_v2_chr12_-_51477333_51477426	0.0191591	UCACAUU	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr9_+_100395891_100395922	0.0190221	UCACAUU	ENST00000375147.3|NCBP1|ENSG00000136937.8|nuclear cap binding protein subunit 1, 80kDa
hg19_v2_chr8_+_22457127_22457185	0.0189028	UCACAUU	ENST00000289989.5|C8orf58|ENSG00000241852.5|chromosome 8 open reading frame 58
hg19_v2_chr14_-_59932044_59932114	0.0188793	UCACAUU	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr16_-_75498553_75498635	0.0186943	UCACAUU	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr10_+_96162242_96162283	0.0185304	UCACAUU	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr1_+_24286287_24286326	0.0183015	UCACAUU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr3_-_71774516_71774587	0.0182939	UCACAUU	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr3_+_188889737_188889767	0.0182182	UCACAUU	ENST00000345063.3|TPRG1|ENSG00000188001.5|tumor protein p63 regulated 1
hg19_v2_chr11_+_113930291_113930339	0.0178628	UCACAUU	ENST00000335953.4|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr19_+_13135386_13135435	0.017749	UCACAUU	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr10_+_70480963_70481010	0.0177121	UCACAUU	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr5_-_79551858_79551907	0.0175865	UCACAUU	ENST00000507668.2|SERINC5|ENSG00000164300.11|serine incorporator 5 	ENST00000512721.1|SERINC5|ENSG00000164300.11|serine incorporator 5
hg19_v2_chr4_-_140223670_140223705	0.017478	UCACAUU	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr15_+_63481668_63481812	0.0171252	UCACAUU	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr5_+_56469775_56469837	0.0167536	UCACAUU	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr4_+_39699664_39699772	0.0166422	UCACAUU	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr15_-_56209306_56209344	0.0164331	UCACAUU	ENST00000506154.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000338963.2|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase 	ENST00000508342.1|NEDD4|ENSG00000069869.11|neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
hg19_v2_chr8_+_37620097_37620146	0.0164146	UCACAUU	ENST00000328195.3|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523358.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial) 	ENST00000523187.1|PROSC|ENSG00000147471.7|proline synthetase co-transcribed homolog (bacterial)
hg19_v2_chr2_-_10952922_10952970	0.0163375	UCACAUU	ENST00000272227.3|PDIA6|ENSG00000143870.8|protein disulfide isomerase family A, member 6
hg19_v2_chr6_+_121756809_121756838	0.0162583	UCACAUU	ENST00000282561.3|GJA1|ENSG00000152661.7|gap junction protein, alpha 1, 43kDa
hg19_v2_chr4_+_113152881_113152912	0.016058	UCACAUU	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr1_-_212004090_212004168	0.0159964	UCACAUU	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr10_+_72238517_72238595	0.0159762	UCACAUU	ENST00000263563.6|PALD1|ENSG00000107719.8|phosphatase domain containing, paladin 1
hg19_v2_chr15_-_64648273_64648442	0.0158534	UCACAUU	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chrX_-_119077695_119077757	0.0153027	UCACAUU	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr7_+_69064300_69064342	0.0152554	UCACAUU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr9_+_110045537_110045572	0.0152463	UCACAUU	ENST00000358015.3|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr20_+_43595115_43595220	0.0151275	UCACAUU	ENST00000372806.3|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000396731.4|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000372801.1|STK4|ENSG00000101109.7|serine/threonine kinase 4 	ENST00000499879.2|STK4|ENSG00000101109.7|serine/threonine kinase 4
hg19_v2_chr18_-_78005231_78005435	0.0150632	UCACAUU	ENST00000470488.2|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma 	ENST00000353265.3|PARD6G|ENSG00000178184.11|par-6 family cell polarity regulator gamma
hg19_v2_chr14_-_74485960_74486035	0.0147821	UCACAUU	ENST00000556242.1|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5 	ENST00000334696.6|ENTPD5|ENSG00000187097.8|ectonucleoside triphosphate diphosphohydrolase 5
hg19_v2_chr20_-_43150601_43150751	0.0146422	UCACAUU	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr8_+_20054878_20054950	0.0145602	UCACAUU	ENST00000276390.2|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 	ENST00000519667.1|ATP6V1B2|ENSG00000147416.6|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
hg19_v2_chr13_-_52027134_52027343	0.0145235	UCACAUU	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr17_-_66287257_66287276	0.0144967	UCACAUU	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr4_+_79697495_79697538	0.0143667	UCACAUU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr3_-_171178157_171178225	0.0143546	UCACAUU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr13_+_27131887_27131899	0.0143472	UCACAUU	ENST00000335327.5|WASF3|ENSG00000132970.8|WAS protein family, member 3
hg19_v2_chr1_-_20812690_20812763	0.014302	UCACAUU	ENST00000375078.3|CAMK2N1|ENSG00000162545.5|calcium/calmodulin-dependent protein kinase II inhibitor 1
hg19_v2_chr12_+_122242597_122242638	0.0142209	UCACAUU	ENST00000267197.5|SETD1B|ENSG00000139718.6|SET domain containing 1B
hg19_v2_chr2_-_158485387_158485517	0.0140715	UCACAUU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr1_-_55680762_55680786	0.0140518	UCACAUU	ENST00000407756.1|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24 	ENST00000294383.6|USP24|ENSG00000162402.8|ubiquitin specific peptidase 24
hg19_v2_chr7_+_138916231_138916231	0.0140076	UCACAUU	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr3_+_38495333_38495422	0.0136534	UCACAUU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr10_-_101491828_101491900	0.0134404	UCACAUU	ENST00000370483.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast) 	ENST00000016171.5|COX15|ENSG00000014919.8|cytochrome c oxidase assembly homolog 15 (yeast)
hg19_v2_chrX_-_40594755_40594809	0.0131943	UCACAUU	ENST00000324817.1|MED14|ENSG00000180182.6|mediator complex subunit 14
hg19_v2_chr3_+_62304712_62304732	0.0131598	UCACAUU	ENST00000494481.1|C3orf14|ENSG00000114405.6|chromosome 3 open reading frame 14
hg19_v2_chr1_-_24194771_24194851	0.0130687	UCACAUU	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr1_+_171810606_171810649	0.0129416	UCACAUU	ENST00000358155.4|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367733.2|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000355305.5|DNM3|ENSG00000197959.9|dynamin 3 	ENST00000367731.1|DNM3|ENSG00000197959.9|dynamin 3
hg19_v2_chr5_+_126112794_126112928	0.0129404	UCACAUU	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr11_+_12695944_12695989	0.0125603	UCACAUU	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr1_-_166845515_166845564	0.0125596	UCACAUU	ENST00000367874.4|TADA1|ENSG00000152382.5|transcriptional adaptor 1
hg19_v2_chr1_+_112162381_112162431	0.0125535	UCACAUU	ENST00000433097.1|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000369709.3|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family 	ENST00000436150.2|RAP1A|ENSG00000116473.10|RAP1A, member of RAS oncogene family
hg19_v2_chr17_-_33760164_33760218	0.0124543	UCACAUU	ENST00000445092.1|SLFN12|ENSG00000172123.8|schlafen family member 12 	ENST00000394562.1|SLFN12|ENSG00000172123.8|schlafen family member 12 	ENST00000447040.2|SLFN12|ENSG00000172123.8|schlafen family member 12
hg19_v2_chr21_+_39628655_39628672	0.012144	UCACAUU	ENST00000398925.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000398928.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000328656.4|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000443341.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr12_-_118797475_118797527	0.0121166	UCACAUU	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr5_+_135468516_135468621	0.0120068	UCACAUU	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr4_+_184020398_184020463	0.0119949	UCACAUU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr7_-_26240357_26240377	0.0119939	UCACAUU	ENST00000354667.4|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1 	ENST00000356674.7|HNRNPA2B1|ENSG00000122566.16|heterogeneous nuclear ribonucleoprotein A2/B1
hg19_v2_chr11_-_79151695_79151710	0.0119315	UCACAUU	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr14_-_61116168_61116180	0.0119003	UCACAUU	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr4_-_174320687_174320687	0.0117726	UCACAUU	ENST00000296506.3|SCRG1|ENSG00000164106.3|stimulator of chondrogenesis 1
hg19_v2_chr2_+_85766280_85766299	0.0115938	UCACAUU	ENST00000306434.3|MAT2A|ENSG00000168906.8|methionine adenosyltransferase II, alpha
hg19_v2_chr15_+_83478370_83478426	0.0115624	UCACAUU	ENST00000286760.4|WHAMM|ENSG00000156232.6|WAS protein homolog associated with actin, golgi membranes and microtubules
hg19_v2_chr6_-_116575226_116575278	0.011554	UCACAUU	ENST00000420283.1|TSPYL4|ENSG00000187189.9|TSPY-like 4
hg19_v2_chr2_+_26915584_26915634	0.0111511	UCACAUU	ENST00000302909.3|KCNK3|ENSG00000171303.5|potassium channel, subfamily K, member 3
hg19_v2_chrX_+_146993449_146993498	0.0110748	UCACAUU	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr12_-_96794143_96794264	0.010953	UCACAUU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr18_-_43547223_43547312	0.0108656	UCACAUU	ENST00000282041.5|EPG5|ENSG00000152223.8|ectopic P-granules autophagy protein 5 homolog (C. elegans)
hg19_v2_chr19_-_12886327_12886434	0.0106814	UCACAUU	ENST00000397668.3|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2 	ENST00000587178.1|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2 	ENST00000264827.5|HOOK2|ENSG00000095066.7|hook microtubule-tethering protein 2
hg19_v2_chr15_+_41709302_41709348	0.0104551	UCACAUU	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chr6_+_15246501_15246527	0.0102962	UCACAUU	ENST00000341776.2|JARID2|ENSG00000008083.9|jumonji, AT rich interactive domain 2
hg19_v2_chr21_-_15755446_15755508	0.0102425	UCACAUU	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr11_+_74660278_74660334	0.0099891	UCACAUU	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr3_+_152879985_152880038	0.0098396	UCACAUU	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr17_-_10421853_10421866	0.00979176	UCACAUU	ENST00000226207.5|MYH1|ENSG00000109061.9|myosin, heavy chain 1, skeletal muscle, adult
hg19_v2_chr2_+_42275153_42275171	0.00975181	UCACAUU	ENST00000294964.5|PKDCC|ENSG00000162878.8|protein kinase domain containing, cytoplasmic
hg19_v2_chr6_+_4021554_4021656	0.00959263	UCACAUU	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr10_+_43633914_43633935	0.00958125	UCACAUU	ENST00000374466.3|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2 	ENST00000374464.1|CSGALNACT2|ENSG00000169826.6|chondroitin sulfate N-acetylgalactosaminyltransferase 2
hg19_v2_chr8_+_134203273_134203289	0.00940381	UCACAUU	ENST00000250160.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr5_+_140201183_140201361	0.00932672	UCACAUU	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr3_-_9291063_9291136	0.00901363	UCACAUU	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr4_-_111119804_111119832	0.00900811	UCACAUU	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr5_+_127419449_127419540	0.0089719	UCACAUU	ENST00000262461.2|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2 	ENST00000343225.4|SLC12A2|ENSG00000064651.9|solute carrier family 12 (sodium/potassium/chloride transporter), member 2
hg19_v2_chr3_-_122233723_122233797	0.00861894	UCACAUU	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr16_-_46723066_46723121	0.00856049	UCACAUU	ENST00000299138.7|VPS35|ENSG00000069329.11|vacuolar protein sorting 35 homolog (S. cerevisiae)
hg19_v2_chr10_-_102279586_102279711	0.00825104	UCACAUU	ENST00000370345.3|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000451524.1|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae) 	ENST00000370329.5|SEC31B|ENSG00000075826.12|SEC31 homolog B (S. cerevisiae)
hg19_v2_chr21_-_36260980_36261011	0.00814174	UCACAUU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr10_-_99094458_99094500	0.00810341	UCACAUU	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr19_-_58662139_58662182	0.00797288	UCACAUU	ENST00000598312.1|ZNF329|ENSG00000181894.10|zinc finger protein 329
hg19_v2_chr4_+_145567173_145567296	0.00773822	UCACAUU	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr3_+_50712672_50712703	0.00765954	UCACAUU	ENST00000266037.9|DOCK3|ENSG00000088538.12|dedicator of cytokinesis 3
hg19_v2_chr8_-_71316021_71316068	0.00760048	UCACAUU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr11_+_133938820_133938914	0.00748182	UCACAUU	ENST00000299106.4|JAM3|ENSG00000166086.8|junctional adhesion molecule 3 	ENST00000529443.2|JAM3|ENSG00000166086.8|junctional adhesion molecule 3
hg19_v2_chr21_+_35445827_35445886	0.00744459	UCACAUU	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr1_-_63153944_63154110	0.00704629	UCACAUU	ENST00000340370.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000404627.2|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000251157.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7
hg19_v2_chr19_-_33793430_33793470	0.00704088	UCACAUU	ENST00000498907.2|CEBPA|ENSG00000245848.2|CCAAT/enhancer binding protein (C/EBP), alpha
hg19_v2_chr13_-_103053946_103054124	0.00682024	UCACAUU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr6_-_52926539_52926668	0.00670657	UCACAUU	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr1_-_51984908_51984952	0.00668022	UCACAUU	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr2_+_42396472_42396563	0.00665016	UCACAUU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr7_-_558876_559046	0.00664047	UCACAUU	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr7_-_28220354_28220441	0.00662464	UCACAUU	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chrX_-_110513703_110513751	0.00651354	UCACAUU	ENST00000324068.1|CAPN6|ENSG00000077274.7|calpain 6
hg19_v2_chr5_-_77844974_77844994	0.00639515	UCACAUU	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr8_+_75896731_75896750	0.00638925	UCACAUU	ENST00000262207.4|CRISPLD1|ENSG00000121005.4|cysteine-rich secretory protein LCCL domain containing 1
hg19_v2_chr17_+_35766965_35767030	0.00621747	UCACAUU	ENST00000394395.2|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000589153.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A 	ENST00000586023.1|TADA2A|ENSG00000108264.12|transcriptional adaptor 2A
hg19_v2_chr20_+_39657454_39657470	0.00619972	UCACAUU	ENST00000361337.2|TOP1|ENSG00000198900.5|topoisomerase (DNA) I
hg19_v2_chr3_-_47823298_47823423	0.00614015	UCACAUU	ENST00000254480.5|SMARCC1|ENSG00000173473.6|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
hg19_v2_chr2_+_196521458_196521491	0.00601066	UCACAUU	ENST00000409086.3|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr3_-_15374033_15374136	0.00591249	UCACAUU	ENST00000253688.5|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated) 	ENST00000383791.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr2_-_160919112_160919162	0.00588937	UCACAUU	ENST00000283243.7|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa 	ENST00000392771.1|PLA2R1|ENSG00000153246.7|phospholipase A2 receptor 1, 180kDa
hg19_v2_chr2_-_209119831_209119857	0.00546197	UCACAUU	ENST00000345146.2|IDH1|ENSG00000138413.9|isocitrate dehydrogenase 1 (NADP+), soluble
hg19_v2_chr9_-_127952032_127952098	0.00533461	UCACAUU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr5_+_10353780_10353890	0.00522823	UCACAUU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr9_+_124413873_124413969	0.00505243	UCACAUU	ENST00000408936.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr5_+_133984462_133984514	0.00502304	UCACAUU	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr11_+_35684288_35684353	0.00487744	UCACAUU	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr19_-_50528584_50528670	0.00474951	UCACAUU	ENST00000594092.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000443401.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000594948.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000377011.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000593919.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601324.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000316763.3|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601341.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000600259.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3
hg19_v2_chr1_-_86174065_86174134	0.00471771	UCACAUU	ENST00000370574.3|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6 	ENST00000431532.2|ZNHIT6|ENSG00000117174.6|zinc finger, HIT-type containing 6
hg19_v2_chr9_+_115513003_115513137	0.00457592	UCACAUU	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr2_-_206950781_206950947	0.00429265	UCACAUU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr11_+_69455855_69455974	0.00422777	UCACAUU	ENST00000227507.2|CCND1|ENSG00000110092.3|cyclin D1 	ENST00000536559.1|CCND1|ENSG00000110092.3|cyclin D1
hg19_v2_chr1_+_179923873_179923954	0.00422189	UCACAUU	ENST00000367607.3|CEP350|ENSG00000135837.11|centrosomal protein 350kDa 	ENST00000491495.2|CEP350|ENSG00000135837.11|centrosomal protein 350kDa
hg19_v2_chr12_+_27396901_27397108	0.00419996	UCACAUU	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr11_-_102962929_102962944	0.00419165	UCACAUU	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr17_-_33416231_33416338	0.00403377	UCACAUU	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr7_+_100797678_100797708	0.00386908	UCACAUU	ENST00000337619.5|AP1S1|ENSG00000106367.9|adaptor-related protein complex 1, sigma 1 subunit
hg19_v2_chr4_-_53525406_53525502	0.00385083	UCACAUU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr3_-_135914615_135914701	0.00380991	UCACAUU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr22_+_21213259_21213271	0.0037669	UCACAUU	ENST00000215730.7|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr3_+_33155444_33155492	0.00375522	UCACAUU	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr17_+_39845134_39845145	0.00356995	UCACAUU	ENST00000591776.1|EIF1|ENSG00000173812.6|eukaryotic translation initiation factor 1 	ENST00000469257.1|EIF1|ENSG00000173812.6|eukaryotic translation initiation factor 1
hg19_v2_chr14_-_31495569_31495636	0.00343759	UCACAUU	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr1_-_84464780_84464862	0.00330165	UCACAUU	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr11_-_86666427_86666450	0.00321204	UCACAUU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chrX_-_132095419_132095426	0.00317284	UCACAUU	ENST00000370836.2|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2 	ENST00000521489.1|HS6ST2|ENSG00000171004.13|heparan sulfate 6-O-sulfotransferase 2
hg19_v2_chr15_-_58358607_58358621	0.00279764	UCACAUU	ENST00000249750.4|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr6_+_3982909_3982909	0.002705	UCACAUU	ENST00000356722.3|C6ORF50|ENSG00000145965.5|C6ORF50
hg19_v2_chr16_-_23160591_23160787	0.00263044	UCACAUU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr6_+_153019023_153019043	0.00247214	UCACAUU	ENST00000367245.5|MYCT1|ENSG00000120279.6|myc target 1 	ENST00000529453.1|MYCT1|ENSG00000120279.6|myc target 1
hg19_v2_chr5_+_34656331_34656351	0.00239295	UCACAUU	ENST00000265109.3|RAI14|ENSG00000039560.9|retinoic acid induced 14
hg19_v2_chr5_+_145583156_145583180	0.00230161	UCACAUU	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr6_+_168227611_168227813	0.00209444	UCACAUU	ENST00000344191.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000351017.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392108.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000366806.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000392112.1|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400824.4|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000447894.2|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 	ENST00000400822.3|MLLT4|ENSG00000130396.16|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4
hg19_v2_chr14_-_92572894_92572965	0.00208513	UCACAUU	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chrX_+_21958674_21958721	0.00207552	UCACAUU	ENST00000404933.2|SMS|ENSG00000102172.11|spermine synthase
hg19_v2_chr8_-_72268889_72268955	0.0017338	UCACAUU	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr17_-_62658186_62658231	0.00142983	UCACAUU	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr1_+_150337144_150337194	0.00132592	UCACAUU	ENST00000539519.1|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369067.3|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2 	ENST00000369068.4|RPRD2|ENSG00000163125.11|regulation of nuclear pre-mRNA domain containing 2
hg19_v2_chr14_+_102786063_102786112	0.00126147	UCACAUU	ENST00000442396.2|ZNF839|ENSG00000022976.11|zinc finger protein 839 	ENST00000262236.5|ZNF839|ENSG00000022976.11|zinc finger protein 839
hg19_v2_chr16_+_81069433_81069462	0.00110685	UCACAUU	ENST00000299575.4|ATMIN|ENSG00000166454.5|ATM interactor
hg19_v2_chr6_-_64029879_64029891	0.000969637	UCACAUU	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr6_+_119215308_119215391	0.000782681	UCACAUU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr8_+_11141925_11141937	0.000756401	UCACAUU	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr9_+_101569944_101569981	0.000669324	UCACAUU	ENST00000375011.3|GALNT12|ENSG00000119514.5|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)
hg19_v2_chr17_-_36956155_36956223	0.000559535	UCACAUU	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chr14_+_50234309_50234330	0.000407344	UCACAUU	ENST00000298307.5|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr22_-_46659219_46659244	0.000201719	UCACAUU	ENST00000253255.5|PKDREJ|ENSG00000130943.5|polycystin (PKD) family receptor for egg jelly
hg19_v2_chr10_-_32636106_32636150	0.000189561	UCACAUU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr12_+_104324112_104324196	5.4256e-05	UCACAUU	ENST00000299767.5|HSP90B1|ENSG00000166598.8|heat shock protein 90kDa beta (Grp94), member 1
hg19_v2_chr2_-_190649082_190649102	1.62589e-05	UCACAUU	ENST00000392350.3|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae) 	ENST00000392349.4|ORMDL1|ENSG00000128699.9|ORM1-like 1 (S. cerevisiae)
