hg19_v2_chr3_+_178865887_178865938	0.480976	SRY	ENST00000477735.1|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr8_-_71157595_71157616	0.389914	SRY	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr14_+_38065052_38065052	0.369135	SRY	ENST00000556845.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chrX_+_107288280_107288317	0.352723	SRY	ENST00000458383.1|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr2_+_162101247_162101266	0.326038	SRY	ENST00000439050.1|AC009299.3|ENSG00000227403.1|AC009299.3	ENST00000436506.1|AC009299.3|ENSG00000227403.1|AC009299.3
hg19_v2_chr10_+_70847852_70847874	0.307554	SRY	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr4_-_111120334_111120361	0.303653	SRY	ENST00000503885.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr17_-_57229155_57229198	0.302115	SRY	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr6_+_21666633_21666681	0.29199	SRY	ENST00000606851.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr8_-_95449155_95449188	0.276536	SRY	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr3_-_28390120_28390150	0.25256	SRY	ENST00000334100.6|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr7_+_134551583_134551599	0.236932	SRY	ENST00000435928.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr3_-_28389922_28389968	0.232925	SRY	ENST00000415852.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr12_+_78359999_78360056	0.232136	SRY	ENST00000550503.1|NAV3|ENSG00000067798.9|neuron navigator 3
hg19_v2_chr12_-_102591604_102591623	0.231685	SRY	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr2_-_55237484_55237585	0.230263	SRY	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr3_-_28390298_28390362	0.227107	SRY	ENST00000457172.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr14_-_89960395_89960534	0.224817	SRY	ENST00000555034.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000553904.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr4_+_24661479_24661534	0.22381	SRY	ENST00000569621.1|RP11-496D24.2|ENSG00000261121.1|RP11-496D24.2
hg19_v2_chr11_-_46848393_46848439	0.222077	SRY	ENST00000526496.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5
hg19_v2_chr14_-_55878538_55878576	0.219313	SRY	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chrX_+_78003204_78003248	0.217119	SRY	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr2_-_207078086_207078106	0.201099	SRY	ENST00000442134.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr14_-_38036271_38036301	0.194528	SRY	ENST00000556024.1|RP11-356O9.2|ENSG00000259087.1|RP11-356O9.2
hg19_v2_chr17_-_46671323_46671323	0.192157	SRY	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr5_+_110073853_110073866	0.1911	SRY	ENST00000513807.1|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46 	ENST00000509442.2|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46
hg19_v2_chr11_-_72852320_72852389	0.185535	SRY	ENST00000422375.1|FCHSD2|ENSG00000137478.10|FCH and double SH3 domains 2
hg19_v2_chr6_-_56716686_56716749	0.181645	SRY	ENST00000520645.1|DST|ENSG00000151914.13|dystonin
hg19_v2_chr18_+_20715416_20715457	0.177885	SRY	ENST00000580153.1|CABLES1|ENSG00000134508.8|Cdk5 and Abl enzyme substrate 1
hg19_v2_chr3_-_28390415_28390550	0.177568	SRY	ENST00000414162.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2 	ENST00000420543.2|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr3_+_112930387_112930431	0.172941	SRY	ENST00000485230.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr8_-_42358742_42358787	0.171192	SRY	ENST00000517366.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr16_+_1832902_1833008	0.168167	SRY	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr10_-_77161533_77161590	0.164792	SRY	ENST00000535216.1|ZNF503|ENSG00000165655.14|zinc finger protein 503
hg19_v2_chr12_-_76817036_76817070	0.164155	SRY	ENST00000546946.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr5_+_137673200_137673271	0.163297	SRY	ENST00000434981.2|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr17_-_70053866_70053882	0.160073	SRY	ENST00000540802.1|RP11-84E24.2|ENSG00000254148.3|RP11-84E24.2
hg19_v2_chr14_-_58893876_58893924	0.156636	SRY	ENST00000555097.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast) 	ENST00000555404.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr14_-_53019211_53019269	0.154628	SRY	ENST00000557374.1|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16 	ENST00000281741.4|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16
hg19_v2_chr4_-_76598326_76598346	0.149451	SRY	ENST00000503660.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr2_+_109204909_109204928	0.148547	SRY	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr12_-_49504449_49504504	0.148534	SRY	ENST00000547675.1|LMBR1L|ENSG00000139636.11|limb development membrane protein 1-like
hg19_v2_chr15_+_91416092_91416120	0.148404	SRY	ENST00000559353.1|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr4_-_105416039_105416065	0.147733	SRY	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr13_+_110958124_110958159	0.142104	SRY	ENST00000400163.2|COL4A2|ENSG00000134871.13|collagen, type IV, alpha 2
hg19_v2_chr4_-_103266626_103266647	0.138508	SRY	ENST00000356736.4|SLC39A8|ENSG00000138821.8|solute carrier family 39 (zinc transporter), member 8
hg19_v2_chr5_-_111091948_111091994	0.136057	SRY	ENST00000447165.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chrX_+_123095860_123095888	0.132064	SRY	ENST00000428941.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chrX_+_123095890_123095944	0.131299	SRY	ENST00000435215.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr3_+_178866199_178866311	0.13113	SRY	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr1_+_25664408_25664408	0.130918	SRY	ENST00000374358.4|TMEM50A|ENSG00000183726.6|transmembrane protein 50A
hg19_v2_chr1_-_40367530_40367597	0.130446	SRY	ENST00000372816.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000372815.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr1_+_84630574_84630602	0.130344	SRY	ENST00000413538.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000417530.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr14_+_37126765_37126799	0.128682	SRY	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chr18_-_13915530_13915540	0.127004	SRY	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr20_-_62582475_62582484	0.125099	SRY	ENST00000369908.5|UCKL1|ENSG00000198276.9|uridine-cytidine kinase 1-like 1
hg19_v2_chr4_-_76598296_76598318	0.124954	SRY	ENST00000395719.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr15_+_49715449_49715464	0.124078	SRY	ENST00000560979.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr3_+_112929850_112929910	0.12261	SRY	ENST00000464546.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr17_-_49124230_49124248	0.122552	SRY	ENST00000510283.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000510855.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chrX_+_9880412_9880550	0.121065	SRY	ENST00000418909.2|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr10_-_77161650_77161664	0.120909	SRY	ENST00000372524.4|ZNF503|ENSG00000165655.14|zinc finger protein 503
hg19_v2_chr10_-_32667660_32667735	0.11935	SRY	ENST00000375110.2|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr2_-_207078154_207078169	0.118787	SRY	ENST00000447845.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr3_-_192635943_192635955	0.117723	SRY	ENST00000392452.2|MB21D2|ENSG00000180611.6|Mab-21 domain containing 2
hg19_v2_chr11_+_36317830_36317850	0.117354	SRY	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr4_+_41614909_41614926	0.115628	SRY	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chrX_+_9880590_9880723	0.115392	SRY	ENST00000452575.1|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr4_-_111120132_111120167	0.115061	SRY	ENST00000506625.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr18_+_11851383_11851399	0.113729	SRY	ENST00000526991.2|CHMP1B|ENSG00000255112.2|charged multivesicular body protein 1B
hg19_v2_chr2_-_192711968_192711981	0.11095	SRY	ENST00000304141.4|SDPR|ENSG00000168497.4|serum deprivation response
hg19_v2_chr6_+_53794780_53794844	0.10751	SRY	ENST00000505762.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000511369.1|RP11-411K7.1|ENSG00000236740.2|RP11-411K7.1	ENST00000431554.2|RP11-411K7.1|ENSG00000236740.2|RP11-411K7.1
hg19_v2_chr7_-_78400598_78400654	0.105879	SRY	ENST00000536571.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr1_+_93645314_93645476	0.105702	SRY	ENST00000343253.7|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr11_+_28724129_28724184	0.105302	SRY	ENST00000513853.1|RP11-115J23.1|ENSG00000249867.1|RP11-115J23.1
hg19_v2_chr9_-_128246769_128246780	0.104917	SRY	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr2_-_157198860_157198978	0.103912	SRY	ENST00000409572.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr14_+_58894404_58894456	0.0977325	SRY	ENST00000554463.1|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000555833.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr11_-_10879572_10879591	0.097664	SRY	ENST00000413761.2|ZBED5|ENSG00000236287.3|zinc finger, BED-type containing 5
hg19_v2_chr3_+_69812701_69812729	0.097447	SRY	ENST00000472437.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr2_-_152146385_152146571	0.0969581	SRY	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr14_+_58894103_58894124	0.0938371	SRY	ENST00000354386.6|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000556134.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr3_-_57233966_57234014	0.0935341	SRY	ENST00000473921.1|HESX1|ENSG00000163666.4|HESX homeobox 1 	ENST00000295934.3|HESX1|ENSG00000163666.4|HESX homeobox 1
hg19_v2_chr1_+_84630053_84630077	0.0920645	SRY	ENST00000394838.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000370682.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000432111.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr4_-_109089573_109089585	0.0915947	SRY	ENST00000265165.1|LEF1|ENSG00000138795.5|lymphoid enhancer-binding factor 1
hg19_v2_chr3_-_123339418_123339473	0.0913375	SRY	ENST00000583087.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr6_-_134639042_134639056	0.0901641	SRY	ENST00000461976.2|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr6_-_116381918_116381977	0.0897291	SRY	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr8_-_145688231_145688261	0.0890445	SRY	ENST00000530374.1|CYHR1|ENSG00000187954.8|cysteine/histidine-rich 1
hg19_v2_chr22_+_19710468_19710468	0.0890119	SRY	ENST00000366425.3|GP1BB|ENSG00000203618.5|glycoprotein Ib (platelet), beta polypeptide
hg19_v2_chr3_-_134092561_134092639	0.0878183	SRY	ENST00000510560.1|AMOTL2|ENSG00000114019.10|angiomotin like 2 	ENST00000504234.1|AMOTL2|ENSG00000114019.10|angiomotin like 2 	ENST00000515172.1|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr16_+_53469525_53469598	0.0872055	SRY	ENST00000544405.2|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr18_-_64271316_64271334	0.0869632	SRY	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr17_-_73511584_73511664	0.0851549	SRY	ENST00000321617.3|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr17_+_27573875_27573881	0.084388	SRY	ENST00000225387.3|CRYBA1|ENSG00000108255.3|crystallin, beta A1
hg19_v2_chr14_-_36990061_36990154	0.0822804	SRY	ENST00000546983.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr18_+_46065570_46065581	0.0821485	SRY	ENST00000591412.1|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr3_-_28390581_28390618	0.0816618	SRY	ENST00000479665.1|AZI2|ENSG00000163512.9|5-azacytidine induced 2
hg19_v2_chr14_-_23288930_23289020	0.0805907	SRY	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr18_-_53019208_53019228	0.0801573	SRY	ENST00000562607.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr5_+_133859996_133860046	0.0794638	SRY	ENST00000512386.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr4_+_76871883_76871883	0.0776683	SRY	ENST00000599764.1|AC110615.1|ENSG00000268788.1|Uncharacterized protein
hg19_v2_chr11_+_128563652_128563689	0.0763257	SRY	ENST00000527786.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr15_-_70994612_70994652	0.0746022	SRY	ENST00000558758.1|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats 	ENST00000379983.2|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats 	ENST00000560441.1|UACA|ENSG00000137831.10|uveal autoantigen with coiled-coil domains and ankyrin repeats
hg19_v2_chr21_-_19191703_19191718	0.0742679	SRY	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr5_-_137674000_137674044	0.0741234	SRY	ENST00000510119.1|CDC25C|ENSG00000158402.14|cell division cycle 25C 	ENST00000513970.1|CDC25C|ENSG00000158402.14|cell division cycle 25C
hg19_v2_chr17_+_79953310_79953319	0.0740889	SRY	ENST00000582355.2|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr2_+_181988620_181988686	0.0739457	SRY	ENST00000428474.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000424655.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr8_-_145060593_145060634	0.0728468	SRY	ENST00000313059.5|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000524918.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000313028.7|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000525773.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10
hg19_v2_chr1_-_115053781_115053853	0.0723941	SRY	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chr2_+_27665289_27665331	0.0721646	SRY	ENST00000407293.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr4_-_65275162_65275186	0.0718131	SRY	ENST00000381210.3|TECRL|ENSG00000205678.3|trans-2,3-enoyl-CoA reductase-like 	ENST00000507440.1|TECRL|ENSG00000205678.3|trans-2,3-enoyl-CoA reductase-like
hg19_v2_chr5_-_131132614_131132648	0.0715958	SRY	ENST00000307968.7|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000307954.8|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr17_-_46703826_46703845	0.0709924	SRY	ENST00000550387.1|HOXB9|ENSG00000170689.8|homeobox B9 	ENST00000311177.5|HOXB9|ENSG00000170689.8|homeobox B9
hg19_v2_chr17_-_79212825_79212865	0.0703148	SRY	ENST00000374769.2|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr19_+_13134772_13134846	0.0700807	SRY	ENST00000587760.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000585575.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr1_+_100316041_100316052	0.0686725	SRY	ENST00000370165.3|AGL|ENSG00000162688.11|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 	ENST00000370163.3|AGL|ENSG00000162688.11|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase 	ENST00000294724.4|AGL|ENSG00000162688.11|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
hg19_v2_chrX_+_123095546_123095644	0.0684371	SRY	ENST00000371157.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371145.3|STAG2|ENSG00000101972.14|stromal antigen 2 	ENST00000371144.3|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr3_-_141868293_141868355	0.0680611	SRY	ENST00000317104.7|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000494358.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr3_-_58652523_58652575	0.067222	SRY	ENST00000489857.1|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D 	ENST00000358781.2|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D
hg19_v2_chr4_-_68749745_68749756	0.0667824	SRY	ENST00000283916.6|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr2_+_181988560_181988577	0.0657647	SRY	ENST00000424170.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000435411.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr10_+_11207485_11207496	0.0656802	SRY	ENST00000537122.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr8_-_116673894_116673913	0.0655467	SRY	ENST00000395713.2|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr10_-_13570533_13570533	0.0649794	SRY	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr15_-_70390213_70390263	0.0649209	SRY	ENST00000557997.1|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) 	ENST00000317509.8|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) 	ENST00000442299.2|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v2_chr15_+_49715293_49715448	0.0639843	SRY	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr7_+_7811992_7811992	0.0639298	SRY	ENST00000406829.1|RPA3-AS1|ENSG00000219545.5|RPA3 antisense RNA 1
hg19_v2_chr13_-_74708372_74708409	0.0633527	SRY	ENST00000377666.4|KLF12|ENSG00000118922.12|Kruppel-like factor 12
hg19_v2_chr1_-_93645818_93645918	0.0624223	SRY	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr2_+_30569506_30569525	0.0616141	SRY	ENST00000421976.2|AC109642.1|ENSG00000235997.2|AC109642.1
hg19_v2_chr6_-_37665751_37665781	0.0612042	SRY	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr9_+_132099158_132099208	0.0603405	SRY	ENST00000444125.1|RP11-65J3.1|ENSG00000233901.1|RP11-65J3.1
hg19_v2_chr20_-_61002584_61002604	0.0596969	SRY	ENST00000252998.1|RBBP8NL|ENSG00000130701.3|RBBP8 N-terminal like
hg19_v2_chr20_-_22566089_22566097	0.0595762	SRY	ENST00000377115.4|FOXA2|ENSG00000125798.10|forkhead box A2
hg19_v2_chr3_+_141596371_141596516	0.0592169	SRY	ENST00000495216.1|ATP1B3|ENSG00000069849.6|ATPase, Na+/K+ transporting, beta 3 polypeptide
hg19_v2_chr14_+_58894141_58894155	0.0573534	SRY	ENST00000423743.3|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr10_+_11207088_11207103	0.0572623	SRY	ENST00000608830.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr17_-_73511504_73511521	0.0565121	SRY	ENST00000581870.1|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr14_+_58894706_58894720	0.0564167	SRY	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr4_+_41614720_41614734	0.0561084	SRY	ENST00000509277.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr10_-_62149433_62149488	0.0558146	SRY	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr16_-_4852915_4852951	0.0553521	SRY	ENST00000322048.7|ROGDI|ENSG00000067836.8|rogdi homolog (Drosophila)
hg19_v2_chr18_+_18943554_18943587	0.0553483	SRY	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr4_-_76598544_76598605	0.0538307	SRY	ENST00000515457.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2 	ENST00000357854.3|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_+_33722080_33722174	0.0535572	SRY	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chr1_+_164528866_164528877	0.053481	SRY	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr3_+_142342228_142342236	0.0531783	SRY	ENST00000337777.3|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr1_+_84630352_84630364	0.0528666	SRY	ENST00000450730.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr14_+_91580732_91580746	0.052552	SRY	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr20_-_52612705_52612736	0.0520365	SRY	ENST00000434986.2|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1
hg19_v2_chr4_+_118955500_118955612	0.0497172	SRY	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr4_-_109090106_109090124	0.0494188	SRY	ENST00000379951.2|LEF1|ENSG00000138795.5|lymphoid enhancer-binding factor 1
hg19_v2_chr1_+_235490659_235490670	0.0493516	SRY	ENST00000488594.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1
hg19_v2_chr1_-_204436344_204436474	0.0493147	SRY	ENST00000367184.2|PIK3C2B|ENSG00000133056.9|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
hg19_v2_chr14_+_91581011_91581044	0.0487098	SRY	ENST00000523894.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522322.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523771.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr15_-_55563072_55563135	0.0485181	SRY	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr18_+_55712915_55712944	0.0479297	SRY	ENST00000592846.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr19_-_46272462_46272562	0.04707	SRY	ENST00000317578.6|SIX5|ENSG00000177045.6|SIX homeobox 5
hg19_v2_chr19_+_13135790_13135811	0.0466271	SRY	ENST00000358552.3|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr17_-_79212884_79212895	0.0458299	SRY	ENST00000300714.3|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr14_-_89883412_89883478	0.045451	SRY	ENST00000557258.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr8_+_24151620_24151647	0.0454138	SRY	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr3_+_57741957_57742045	0.0450069	SRY	ENST00000295951.3|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr20_-_43150601_43150751	0.0446974	SRY	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr5_+_137673945_137673961	0.0446799	SRY	ENST00000513056.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C 	ENST00000511276.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr3_-_47205066_47205085	0.0440688	SRY	ENST00000412450.1|SETD2|ENSG00000181555.15|SET domain containing 2
hg19_v2_chr12_-_62586543_62586623	0.0439671	SRY	ENST00000416284.3|FAM19A2|ENSG00000198673.6|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v2_chr2_-_190927447_190927466	0.043609	SRY	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr3_+_189507432_189507459	0.0434248	SRY	ENST00000354600.5|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr3_-_11610255_11610398	0.0433968	SRY	ENST00000424529.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr10_-_105845674_105845760	0.0430356	SRY	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr17_+_37809333_37809378	0.0424508	SRY	ENST00000443521.1|STARD3|ENSG00000131748.11|StAR-related lipid transfer (START) domain containing 3
hg19_v2_chr4_-_140477910_140477923	0.0419549	SRY	ENST00000404104.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr2_-_160473114_160473203	0.0417686	SRY	ENST00000392783.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr7_+_30185496_30185513	0.0413112	SRY	ENST00000455738.1|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr21_-_32931290_32931341	0.0403595	SRY	ENST00000286827.3|TIAM1|ENSG00000156299.8|T-cell lymphoma invasion and metastasis 1
hg19_v2_chr3_-_135913298_135913396	0.0395659	SRY	ENST00000434835.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr1_-_40367668_40367687	0.0393668	SRY	ENST00000397332.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000429311.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr10_+_115312825_115312833	0.0381837	SRY	ENST00000537906.1|HABP2|ENSG00000148702.10|hyaluronan binding protein 2 	ENST00000541666.1|HABP2|ENSG00000148702.10|hyaluronan binding protein 2
hg19_v2_chr1_+_84630645_84630652	0.0381536	SRY	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr6_-_161085291_161085308	0.0373726	SRY	ENST00000316300.5|LPA|ENSG00000198670.7|lipoprotein, Lp(a)
hg19_v2_chr2_+_208423891_208423950	0.0368127	SRY	ENST00000448277.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000457101.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr5_+_140248518_140248689	0.0368023	SRY	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr14_-_61124977_61125037	0.0365098	SRY	ENST00000554986.1|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr16_+_53920795_53920842	0.0364935	SRY	ENST00000431610.2|FTO|ENSG00000140718.14|fat mass and obesity associated 	ENST00000460382.1|FTO|ENSG00000140718.14|fat mass and obesity associated
hg19_v2_chr2_+_181845843_181845859	0.0362233	SRY	ENST00000602710.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr8_-_13134045_13134063	0.0360924	SRY	ENST00000512044.2|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr1_+_164529004_164529060	0.0358508	SRY	ENST00000559240.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000367897.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000540236.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000401534.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr5_-_131132658_131132719	0.0350746	SRY	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr1_+_33116765_33117088	0.034636	SRY	ENST00000544435.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373485.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000458695.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000490500.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000445722.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr15_+_90544532_90544624	0.0341284	SRY	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr5_+_147774275_147774340	0.0340928	SRY	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr16_-_69390209_69390209	0.0333067	SRY	ENST00000563634.1|RP11-343C2.9|ENSG00000260371.1|Uncharacterized protein
hg19_v2_chr2_+_27665232_27665286	0.0332955	SRY	ENST00000543753.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3 	ENST00000288873.3|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr5_+_86563636_86563712	0.0324537	SRY	ENST00000274376.6|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr20_+_32150140_32150230	0.0322841	SRY	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr2_+_86947296_86947434	0.0311711	SRY	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr15_+_59397275_59397278	0.0310238	SRY	ENST00000288207.2|CCNB2|ENSG00000157456.3|cyclin B2
hg19_v2_chr3_+_189507523_189507590	0.0308913	SRY	ENST00000437221.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392463.2|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392461.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000449992.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000456148.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr4_-_83280767_83280796	0.0304155	SRY	ENST00000514671.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chr11_-_82708435_82708472	0.0300477	SRY	ENST00000525117.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000532548.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr12_-_102874378_102874394	0.0294921	SRY	ENST00000456098.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr2_+_120517174_120517207	0.0294648	SRY	ENST00000263708.2|PTPN4|ENSG00000088179.4|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)
hg19_v2_chr6_+_157099036_157099086	0.0286254	SRY	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr2_+_181845763_181845795	0.0285784	SRY	ENST00000602499.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr9_+_124461603_124461649	0.028569	SRY	ENST00000373782.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr6_+_139094657_139094657	0.0282996	SRY	ENST00000332797.6|CCDC28A|ENSG00000024862.12|coiled-coil domain containing 28A
hg19_v2_chr3_+_112930373_112930384	0.0273094	SRY	ENST00000498710.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr11_+_120255997_120256048	0.0271513	SRY	ENST00000532993.1|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr14_-_51027838_51027851	0.0271438	SRY	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr15_+_98503922_98503964	0.0268113	SRY	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr4_-_140477928_140477990	0.0267518	SRY	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr4_-_164534657_164534701	0.0265379	SRY	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr17_-_67138015_67138062	0.0264545	SRY	ENST00000284425.2|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6 	ENST00000590645.1|ABCA6|ENSG00000154262.8|ATP-binding cassette, sub-family A (ABC1), member 6
hg19_v2_chr10_+_111985713_111985774	0.0263849	SRY	ENST00000239007.7|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr6_-_111888474_111888563	0.0260823	SRY	ENST00000368735.1|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr9_-_39239171_39239171	0.0260065	SRY	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr11_+_67007518_67007533	0.0259591	SRY	ENST00000530342.1|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A 	ENST00000308783.5|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A
hg19_v2_chr17_-_10452929_10452946	0.0259206	SRY	ENST00000532183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000397183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000420805.1|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult
hg19_v2_chr19_+_13135731_13135787	0.0259129	SRY	ENST00000587260.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr8_-_110346614_110346722	0.0252917	SRY	ENST00000239690.4|NUDCD1|ENSG00000120526.6|NudC domain containing 1
hg19_v2_chr11_-_46141338_46141418	0.0252396	SRY	ENST00000529782.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A 	ENST00000532010.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A 	ENST00000525438.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A 	ENST00000533757.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A 	ENST00000527782.1|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr2_-_160472952_160473080	0.0249446	SRY	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr1_-_160231451_160231592	0.0246113	SRY	ENST00000495887.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr3_-_69129501_69129559	0.0244381	SRY	ENST00000540295.1|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000415609.2|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000361055.4|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000349511.4|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3
hg19_v2_chr12_+_60058458_60058512	0.0237183	SRY	ENST00000548610.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr3_-_123339343_123339401	0.0235121	SRY	ENST00000578202.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr10_+_99079008_99079060	0.023435	SRY	ENST00000371021.3|FRAT1|ENSG00000165879.7|frequently rearranged in advanced T-cell lymphomas
hg19_v2_chr5_+_52083730_52083821	0.0231976	SRY	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr11_-_10879593_10879620	0.02287	SRY	ENST00000528289.1|ZBED5|ENSG00000236287.3|zinc finger, BED-type containing 5 	ENST00000432999.2|ZBED5|ENSG00000236287.3|zinc finger, BED-type containing 5
hg19_v2_chr14_+_91580777_91580793	0.0228477	SRY	ENST00000525393.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000428926.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517362.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr1_-_39395165_39395198	0.0223882	SRY	ENST00000372985.3|RHBDL2|ENSG00000158315.6|rhomboid, veinlet-like 2 (Drosophila)
hg19_v2_chr4_-_73434498_73434516	0.0222299	SRY	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr9_+_116343192_116343225	0.0213455	SRY	ENST00000471324.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr18_-_64271363_64271390	0.0211786	SRY	ENST00000262150.2|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr17_+_8924837_8924872	0.0207966	SRY	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr8_+_67405794_67405862	0.0205205	SRY	ENST00000522977.1|C8orf46|ENSG00000169085.7|chromosome 8 open reading frame 46 	ENST00000480005.1|C8orf46|ENSG00000169085.7|chromosome 8 open reading frame 46
hg19_v2_chr15_-_55562582_55562617	0.0203319	SRY	ENST00000396307.2|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr3_-_33700589_33700632	0.0199352	SRY	ENST00000461133.3|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000496954.2|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr12_-_102874416_102874425	0.0197628	SRY	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr11_+_128563948_128564003	0.0197496	SRY	ENST00000534087.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr3_-_33700933_33701085	0.019478	SRY	ENST00000480013.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr1_-_85930246_85930289	0.0184566	SRY	ENST00000426972.3|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr6_-_79787902_79787958	0.0182361	SRY	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr18_+_72922710_72922733	0.0179525	SRY	ENST00000322038.5|TSHZ1|ENSG00000179981.9|teashirt zinc finger homeobox 1
hg19_v2_chr11_+_22694123_22694154	0.0174144	SRY	ENST00000534801.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr12_+_42725554_42725604	0.0171095	SRY	ENST00000546750.1|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000547847.1|PPHLN1|ENSG00000134283.13|periphilin 1
hg19_v2_chr16_-_68482440_68482591	0.0160121	SRY	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr10_+_74653330_74653345	0.0159232	SRY	ENST00000334011.5|OIT3|ENSG00000138315.8|oncoprotein induced transcript 3
hg19_v2_chr11_+_126225529_126225660	0.0155669	SRY	ENST00000227495.6|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000444328.2|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000356132.4|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg19_v2_chr5_+_66254698_66254885	0.0151688	SRY	ENST00000405643.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000407621.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4 	ENST00000432426.1|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr10_+_11207438_11207455	0.0150815	SRY	ENST00000609692.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000354897.3|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr11_-_82708519_82708523	0.0148159	SRY	ENST00000534301.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr12_+_130646999_130647019	0.0141287	SRY	ENST00000539839.1|FZD10|ENSG00000111432.4|frizzled family receptor 10 	ENST00000229030.4|FZD10|ENSG00000111432.4|frizzled family receptor 10
hg19_v2_chr14_+_91580708_91580730	0.0135975	SRY	ENST00000518868.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr6_+_126070726_126070768	0.0135934	SRY	ENST00000368364.3|HEY2|ENSG00000135547.4|hes-related family bHLH transcription factor with YRPW motif 2
hg19_v2_chr12_-_56352368_56352387	0.0130345	SRY	ENST00000549404.1|PMEL|ENSG00000185664.10|premelanosome protein
hg19_v2_chr8_-_101724989_101725030	0.0127991	SRY	ENST00000517403.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chrX_+_84499081_84499115	0.0127749	SRY	ENST00000276123.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr6_+_122720681_122720713	0.0126268	SRY	ENST00000368455.4|HSF2|ENSG00000025156.8|heat shock transcription factor 2 	ENST00000452194.1|HSF2|ENSG00000025156.8|heat shock transcription factor 2
hg19_v2_chr10_-_105845536_105845581	0.012437	SRY	ENST00000393211.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr12_-_95611149_95611249	0.0121553	SRY	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr5_+_140739537_140739703	0.0119745	SRY	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chr2_+_162087577_162087697	0.0119546	SRY	ENST00000439442.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr1_-_117210290_117210376	0.0117716	SRY	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr6_+_108882069_108882087	0.0114103	SRY	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr1_+_97188188_97188273	0.0110636	SRY	ENST00000541987.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr16_+_2587965_2587994	0.0110155	SRY	ENST00000342085.4|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000566659.1|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr3_+_28390637_28390705	0.0101456	SRY	ENST00000420223.1|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2 	ENST00000383768.2|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2
hg19_v2_chr2_+_109204743_109204855	0.00999541	SRY	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr17_-_56406117_56406165	0.00956916	SRY	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr1_-_153931052_153931124	0.00942032	SRY	ENST00000368630.3|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2 	ENST00000368633.1|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2
hg19_v2_chr7_+_80267949_80267966	0.00845654	SRY	ENST00000482059.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr8_+_21777159_21777221	0.00843781	SRY	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr12_+_94542459_94542513	0.00840719	SRY	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr11_-_13461790_13461826	0.0082389	SRY	ENST00000530907.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr11_-_125351481_125351529	0.00756234	SRY	ENST00000577924.1|FEZ1|ENSG00000149557.8|fasciculation and elongation protein zeta 1 (zygin I)
hg19_v2_chr15_-_55562479_55562490	0.00706195	SRY	ENST00000564609.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr4_+_124571409_124571447	0.00703152	SRY	ENST00000514823.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000511919.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091 	ENST00000508111.1|RP11-93L9.1|ENSG00000249464.1|long intergenic non-protein coding RNA 1091
hg19_v2_chr18_-_52989525_52989623	0.00672951	SRY	ENST00000457482.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr18_+_3466248_3466312	0.00632622	SRY	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr1_-_245026388_245026408	0.00583884	SRY	ENST00000440865.1|HNRNPU|ENSG00000153187.12|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
hg19_v2_chr5_+_138677515_138677581	0.00558779	SRY	ENST00000265192.4|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000511706.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr16_-_15736881_15736928	0.00550282	SRY	ENST00000540441.2|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr17_-_17875688_17875736	0.00506675	SRY	ENST00000379504.3|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000318094.10|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000540946.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000542206.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000395739.4|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000581396.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000535933.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken) 	ENST00000579586.1|TOM1L2|ENSG00000175662.13|target of myb1-like 2 (chicken)
hg19_v2_chr7_-_78400364_78400403	0.00500902	SRY	ENST00000535697.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr5_-_41794663_41794702	0.00465081	SRY	ENST00000510634.1|OXCT1|ENSG00000083720.8|3-oxoacid CoA transferase 1
hg19_v2_chr17_+_6658878_6658889	0.00435258	SRY	ENST00000574394.1|XAF1|ENSG00000132530.12|XIAP associated factor 1
hg19_v2_chr16_+_2587998_2588011	0.00414326	SRY	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr2_-_163099885_163099966	0.00413102	SRY	ENST00000443424.1|FAP|ENSG00000078098.9|fibroblast activation protein, alpha
hg19_v2_chr2_-_71454185_71454242	0.00404551	SRY	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr17_-_37764128_37764258	0.00394529	SRY	ENST00000302584.4|NEUROD2|ENSG00000171532.4|neuronal differentiation 2
hg19_v2_chr1_-_115292591_115292811	0.00361124	SRY	ENST00000438362.2|CSDE1|ENSG00000009307.11|cold shock domain containing E1, RNA-binding
hg19_v2_chr12_-_498415_498492	0.00350943	SRY	ENST00000535014.1|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000543507.1|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000544760.1|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr15_-_88799948_88799978	0.00326595	SRY	ENST00000394480.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3
hg19_v2_chr11_-_10830463_10830494	0.00306203	SRY	ENST00000527419.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530211.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530702.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000524932.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000532570.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr4_-_111119804_111119832	0.00276651	SRY	ENST00000394607.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6 	ENST00000302274.3|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_+_41236325_41236401	0.0020223	SRY	ENST00000426215.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa 	ENST00000405570.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa
hg19_v2_chr16_+_28857957_28857969	0.0018994	SRY	ENST00000567536.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr1_+_40840320_40840413	0.00188478	SRY	ENST00000372708.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr6_-_42418999_42419087	0.00140225	SRY	ENST00000340840.2|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000354325.2|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr17_+_36861735_36861795	0.00117623	SRY	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr10_+_115312766_115312786	0.00111911	SRY	ENST00000351270.3|HABP2|ENSG00000148702.10|hyaluronan binding protein 2
hg19_v2_chr5_+_38148582_38148600	0.00104713	SRY	ENST00000508853.1|CTD-2207A17.1|ENSG00000248461.1|CTD-2207A17.1
hg19_v2_chr16_+_28858004_28858029	0.000486169	SRY	ENST00000322610.8|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr3_+_57882024_57882045	0.000129157	SRY	ENST00000494088.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
