hg19_v2_chr14_+_105212297_105212393	0.742764	SPDEF	ENST00000556623.1|ADSSL1|ENSG00000185100.6|adenylosuccinate synthase like 1 	ENST00000555674.1|ADSSL1|ENSG00000185100.6|adenylosuccinate synthase like 1
hg19_v2_chr5_+_158690089_158690089	0.702368	SPDEF	ENST00000296786.6|UBLCP1|ENSG00000164332.6|ubiquitin-like domain containing CTD phosphatase 1
hg19_v2_chr4_+_141445333_141445362	0.54386	SPDEF	ENST00000507667.1|ELMOD2|ENSG00000179387.5|ELMO/CED-12 domain containing 2
hg19_v2_chr7_-_77427676_77427897	0.486576	SPDEF	ENST00000257663.3|TMEM60|ENSG00000135211.5|transmembrane protein 60
hg19_v2_chr4_-_153700864_153700930	0.465876	SPDEF	ENST00000304337.2|TIGD4|ENSG00000169989.2|tigger transposable element derived 4
hg19_v2_chr14_-_31926623_31926656	0.464239	SPDEF	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr8_-_100025238_100025272	0.439821	SPDEF	ENST00000521696.1|RP11-410L14.2|ENSG00000253948.1|RP11-410L14.2
hg19_v2_chr17_-_56065540_56065627	0.437482	SPDEF	ENST00000583932.1|VEZF1|ENSG00000136451.4|vascular endothelial zinc finger 1
hg19_v2_chr18_-_19180681_19180711	0.431234	SPDEF	ENST00000269214.5|ESCO1|ENSG00000141446.6|establishment of sister chromatid cohesion N-acetyltransferase 1
hg19_v2_chr14_-_67826538_67826565	0.412759	SPDEF	ENST00000553687.1|ATP6V1D|ENSG00000100554.7|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D
hg19_v2_chr4_+_48833312_48833371	0.411151	SPDEF	ENST00000508293.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000513391.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr15_-_65282274_65282281	0.362077	SPDEF	ENST00000204566.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr1_+_84629976_84630014	0.348418	SPDEF	ENST00000446538.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000370684.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000436133.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr11_-_71751715_71751788	0.340077	SPDEF	ENST00000535947.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr2_-_63815628_63815657	0.339284	SPDEF	ENST00000409562.3|WDPCP|ENSG00000143951.11|WD repeat containing planar cell polarity effector
hg19_v2_chr4_+_166128735_166128813	0.337186	SPDEF	ENST00000226725.6|KLHL2|ENSG00000109466.9|kelch-like family member 2
hg19_v2_chr1_+_67395922_67395976	0.335534	SPDEF	ENST00000401042.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355356.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr15_-_65282232_65282271	0.333974	SPDEF	ENST00000416889.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr1_+_84630053_84630077	0.331547	SPDEF	ENST00000394838.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000370682.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000432111.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr10_-_119806085_119806114	0.327205	SPDEF	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr1_+_193028552_193028589	0.326378	SPDEF	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr7_-_38948774_38948829	0.32607	SPDEF	ENST00000395969.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000414632.1|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000310301.4|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr14_-_31926595_31926618	0.323516	SPDEF	ENST00000547378.1|RP11-176H8.1|ENSG00000203546.3|Uncharacterized protein
hg19_v2_chr14_+_60716276_60716378	0.320921	SPDEF	ENST00000528241.2|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr17_+_65714018_65714067	0.317404	SPDEF	ENST00000581106.1|NOL11|ENSG00000130935.5|nucleolar protein 11 	ENST00000535137.1|NOL11|ENSG00000130935.5|nucleolar protein 11
hg19_v2_chr9_-_72374848_72374894	0.315041	SPDEF	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr17_+_65713925_65713949	0.31408	SPDEF	ENST00000253247.4|NOL11|ENSG00000130935.5|nucleolar protein 11
hg19_v2_chr14_-_64010006_64010023	0.313279	SPDEF	ENST00000555899.1|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr15_-_59949667_59949690	0.311891	SPDEF	ENST00000396061.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa
hg19_v2_chr12_+_102513950_102513996	0.311445	SPDEF	ENST00000378128.3|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000327680.2|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000541394.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000543784.1|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr3_+_32023232_32023273	0.305985	SPDEF	ENST00000360311.4|ZNF860|ENSG00000197385.5|zinc finger protein 860
hg19_v2_chr12_-_57914275_57914304	0.298054	SPDEF	ENST00000547303.1|DDIT3|ENSG00000175197.6|DNA-damage-inducible transcript 3 	ENST00000552740.1|DDIT3|ENSG00000175197.6|DNA-damage-inducible transcript 3 	ENST00000547526.1|DDIT3|ENSG00000175197.6|DNA-damage-inducible transcript 3 	ENST00000551116.1|DDIT3|ENSG00000175197.6|DNA-damage-inducible transcript 3 	ENST00000346473.3|DDIT3|ENSG00000175197.6|DNA-damage-inducible transcript 3
hg19_v2_chr7_-_91875109_91875260	0.296209	SPDEF	ENST00000412043.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000430102.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425073.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394503.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000454017.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000440209.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000413688.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000452773.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000433016.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394505.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000422347.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000458493.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000425919.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr7_+_77428066_77428132	0.295935	SPDEF	ENST00000422959.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000307305.8|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000424760.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr15_-_64648273_64648442	0.29484	SPDEF	ENST00000607537.1|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303052.7|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1 	ENST00000303032.6|CSNK1G1|ENSG00000169118.11|casein kinase 1, gamma 1
hg19_v2_chr8_-_124665190_124665190	0.28972	SPDEF	ENST00000325995.7|KLHL38|ENSG00000175946.8|kelch-like family member 38
hg19_v2_chr5_-_114961858_114961876	0.288226	SPDEF	ENST00000282382.4|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough 	ENST00000456936.3|TMED7|ENSG00000134970.13|transmembrane emp24 protein transport domain containing 7 	ENST00000408996.4|TICAM2|ENSG00000243414.4|toll-like receptor adaptor molecule 2
hg19_v2_chr4_+_48833183_48833194	0.281984	SPDEF	ENST00000503016.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr10_-_14996070_14996102	0.275639	SPDEF	ENST00000378258.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000453695.2|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000378246.2|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C
hg19_v2_chr12_+_102514019_102514035	0.273715	SPDEF	ENST00000537257.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000358383.5|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000392911.2|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr12_+_29302119_29302134	0.272309	SPDEF	ENST00000536681.3|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr7_+_77428149_77428220	0.267117	SPDEF	ENST00000415251.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000275575.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr8_+_15397732_15397792	0.266181	SPDEF	ENST00000382020.4|TUSC3|ENSG00000104723.16|tumor suppressor candidate 3 	ENST00000506802.1|TUSC3|ENSG00000104723.16|tumor suppressor candidate 3 	ENST00000509380.1|TUSC3|ENSG00000104723.16|tumor suppressor candidate 3 	ENST00000503731.1|TUSC3|ENSG00000104723.16|tumor suppressor candidate 3
hg19_v2_chr3_-_139108463_139108474	0.257714	SPDEF	ENST00000512242.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime)
hg19_v2_chr2_+_198380289_198380305	0.257646	SPDEF	ENST00000233892.4|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409916.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr6_+_134274354_134274371	0.256396	SPDEF	ENST00000367869.1|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr1_+_235492300_235492344	0.254826	SPDEF	ENST00000476121.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000497327.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1
hg19_v2_chr2_+_162016827_162016876	0.252962	SPDEF	ENST00000429217.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000406287.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000402568.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr15_+_80987617_80987720	0.252886	SPDEF	ENST00000258884.4|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C 	ENST00000558464.1|ABHD17C|ENSG00000136379.7|abhydrolase domain containing 17C
hg19_v2_chr2_+_63816126_63816152	0.250484	SPDEF	ENST00000454035.1|MDH1|ENSG00000014641.13|malate dehydrogenase 1, NAD (soluble)
hg19_v2_chr19_-_45004556_45004581	0.250175	SPDEF	ENST00000587047.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000391956.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000221327.4|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000586637.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000591064.1|ZNF180|ENSG00000167384.6|zinc finger protein 180 	ENST00000592529.1|ZNF180|ENSG00000167384.6|zinc finger protein 180
hg19_v2_chr8_-_77912431_77912503	0.246045	SPDEF	ENST00000357039.4|PEX2|ENSG00000164751.10|peroxisomal biogenesis factor 2 	ENST00000522527.1|PEX2|ENSG00000164751.10|peroxisomal biogenesis factor 2
hg19_v2_chr14_-_31926701_31926734	0.24181	SPDEF	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr12_+_29302023_29302101	0.241137	SPDEF	ENST00000551451.1|FAR2|ENSG00000064763.6|fatty acyl CoA reductase 2
hg19_v2_chr4_+_39640787_39640834	0.238742	SPDEF	ENST00000532680.1|RP11-539G18.2|ENSG00000255458.1|RP11-539G18.2
hg19_v2_chr7_-_91875358_91875480	0.238598	SPDEF	ENST00000458177.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000394507.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000340022.2|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing 	ENST00000444960.1|KRIT1|ENSG00000001631.10|KRIT1, ankyrin repeat containing
hg19_v2_chr1_-_193028426_193028539	0.23803	SPDEF	ENST00000367450.3|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000530098.2|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367451.4|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367448.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367449.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5
hg19_v2_chr13_+_25670268_25670315	0.235285	SPDEF	ENST00000281589.3|PABPC3|ENSG00000151846.7|poly(A) binding protein, cytoplasmic 3
hg19_v2_chr1_+_170501270_170501325	0.233217	SPDEF	ENST00000367763.3|GORAB|ENSG00000120370.8|golgin, RAB6-interacting 	ENST00000367762.1|GORAB|ENSG00000120370.8|golgin, RAB6-interacting
hg19_v2_chr4_-_83812157_83812171	0.233187	SPDEF	ENST00000513323.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr14_+_60716159_60716271	0.231794	SPDEF	ENST00000325658.3|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr4_+_144106063_144106078	0.23172	SPDEF	ENST00000510377.1|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr14_-_69263043_69263190	0.229414	SPDEF	ENST00000408913.2|ZFP36L1|ENSG00000185650.8|ZFP36 ring finger protein-like 1
hg19_v2_chr1_-_193028621_193028628	0.222968	SPDEF	ENST00000367455.4|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5 	ENST00000367454.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5
hg19_v2_chr4_+_48833119_48833157	0.222398	SPDEF	ENST00000444354.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000509963.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000509246.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr2_-_54014127_54014151	0.221341	SPDEF	ENST00000394717.2|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough
hg19_v2_chrX_-_131352152_131352204	0.221107	SPDEF	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr5_+_110074685_110074756	0.217099	SPDEF	ENST00000355943.3|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46 	ENST00000447245.2|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46
hg19_v2_chr8_-_56986768_56986915	0.215318	SPDEF	ENST00000523936.1|RPS20|ENSG00000008988.5|ribosomal protein S20
hg19_v2_chr18_+_48556470_48556640	0.210131	SPDEF	ENST00000589076.1|SMAD4|ENSG00000141646.9|SMAD family member 4 	ENST00000590061.1|SMAD4|ENSG00000141646.9|SMAD family member 4 	ENST00000591914.1|SMAD4|ENSG00000141646.9|SMAD family member 4 	ENST00000342988.3|SMAD4|ENSG00000141646.9|SMAD family member 4
hg19_v2_chr8_-_130951940_130952118	0.209424	SPDEF	ENST00000522250.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522941.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522746.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520204.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519070.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520254.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519824.2|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519540.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B
hg19_v2_chr20_-_34287220_34287231	0.208998	SPDEF	ENST00000306750.3|NFS1|ENSG00000244005.8|NFS1 cysteine desulfurase
hg19_v2_chr6_-_143832793_143832806	0.208745	SPDEF	ENST00000438118.2|FUCA2|ENSG00000001036.9|fucosidase, alpha-L- 2, plasma
hg19_v2_chr19_+_38880695_38880840	0.207084	SPDEF	ENST00000587947.1|SPRED3|ENSG00000188766.8|sprouty-related, EVH1 domain containing 3 	ENST00000338502.4|SPRED3|ENSG00000188766.8|sprouty-related, EVH1 domain containing 3
hg19_v2_chr12_+_49961990_49962155	0.20609	SPDEF	ENST00000551063.1|PRPF40B|ENSG00000110844.9|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
hg19_v2_chr14_-_64010046_64010107	0.200024	SPDEF	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr2_+_27805880_27805967	0.199725	SPDEF	ENST00000379717.1|ZNF512|ENSG00000243943.5|zinc finger protein 512 	ENST00000355467.4|ZNF512|ENSG00000243943.5|zinc finger protein 512 	ENST00000556601.1|ZNF512|ENSG00000243943.5|zinc finger protein 512 	ENST00000416005.2|ZNF512|ENSG00000243943.5|zinc finger protein 512
hg19_v2_chr9_+_36190853_36190904	0.199628	SPDEF	ENST00000433436.2|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000538225.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000540080.1|CLTA|ENSG00000122705.12|clathrin, light chain A
hg19_v2_chr18_+_11851383_11851399	0.197881	SPDEF	ENST00000526991.2|CHMP1B|ENSG00000255112.2|charged multivesicular body protein 1B
hg19_v2_chr2_+_101618691_101618761	0.196918	SPDEF	ENST00000409000.1|RPL31|ENSG00000071082.6|ribosomal protein L31 	ENST00000409028.4|RPL31|ENSG00000071082.6|ribosomal protein L31 	ENST00000409320.3|RPL31|ENSG00000071082.6|ribosomal protein L31 	ENST00000409733.1|RPL31|ENSG00000071082.6|ribosomal protein L31 	ENST00000409650.1|RPL31|ENSG00000071082.6|ribosomal protein L31 	ENST00000409038.1|RPL31|ENSG00000071082.6|ribosomal protein L31
hg19_v2_chr3_-_133380731_133380834	0.195809	SPDEF	ENST00000260810.5|TOPBP1|ENSG00000163781.8|topoisomerase (DNA) II binding protein 1
hg19_v2_chr10_-_15902449_15902528	0.194074	SPDEF	ENST00000277632.3|FAM188A|ENSG00000148481.9|family with sequence similarity 188, member A
hg19_v2_chr16_-_25122785_25122876	0.192255	SPDEF	ENST00000563962.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1	ENST00000569920.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr7_-_135662056_135662114	0.190987	SPDEF	ENST00000393085.3|MTPN|ENSG00000105887.10|myotrophin 	ENST00000435723.1|MTPN|ENSG00000105887.10|myotrophin
hg19_v2_chr19_-_53696587_53696633	0.190231	SPDEF	ENST00000396424.3|ZNF665|ENSG00000197497.6|zinc finger protein 665 	ENST00000600412.1|ZNF665|ENSG00000197497.6|zinc finger protein 665
hg19_v2_chr9_+_36190905_36190966	0.189937	SPDEF	ENST00000345519.5|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000470744.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000242285.6|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000466396.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000396603.2|CLTA|ENSG00000122705.12|clathrin, light chain A
hg19_v2_chr4_+_48833015_48833065	0.18956	SPDEF	ENST00000509122.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000509664.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000505922.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000514981.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr12_-_64616019_64616082	0.188546	SPDEF	ENST00000311915.8|C12orf66|ENSG00000174206.8|chromosome 12 open reading frame 66 	ENST00000398055.3|C12orf66|ENSG00000174206.8|chromosome 12 open reading frame 66 	ENST00000544871.1|C12orf66|ENSG00000174206.8|chromosome 12 open reading frame 66
hg19_v2_chr1_+_235491714_235491895	0.188418	SPDEF	ENST00000471812.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000358966.2|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000282841.5|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1 	ENST00000391855.2|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1
hg19_v2_chr17_-_33905521_33905648	0.187889	SPDEF	ENST00000225873.4|PEX12|ENSG00000108733.5|peroxisomal biogenesis factor 12
hg19_v2_chr2_+_217363793_217363823	0.187269	SPDEF	ENST00000456586.1|RPL37A|ENSG00000197756.5|ribosomal protein L37a 	ENST00000598925.1|RPL37A|ENSG00000197756.5|ribosomal protein L37a 	ENST00000427280.2|RPL37A|ENSG00000197756.5|ribosomal protein L37a
hg19_v2_chr15_-_59949693_59949751	0.18642	SPDEF	ENST00000396063.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396064.3|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000484743.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000559706.1|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa 	ENST00000396060.2|GTF2A2|ENSG00000140307.6|general transcription factor IIA, 2, 12kDa
hg19_v2_chr7_+_93551011_93551029	0.185335	SPDEF	ENST00000248564.5|GNG11|ENSG00000127920.5|guanine nucleotide binding protein (G protein), gamma 11
hg19_v2_chr2_+_162016804_162016814	0.183849	SPDEF	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr11_-_118122996_118123090	0.182725	SPDEF	ENST00000525386.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000527472.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000278949.4|MPZL3|ENSG00000160588.5|myelin protein zero-like 3
hg19_v2_chr1_+_193028717_193028801	0.181914	SPDEF	ENST00000415442.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000506303.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr17_-_7108436_7108525	0.181069	SPDEF	ENST00000493294.1|DLG4|ENSG00000132535.14|discs, large homolog 4 (Drosophila)
hg19_v2_chr1_-_169337176_169337205	0.179477	SPDEF	ENST00000472647.1|NME7|ENSG00000143156.9|NME/NM23 family member 7 	ENST00000367811.3|NME7|ENSG00000143156.9|NME/NM23 family member 7
hg19_v2_chr14_+_60715928_60716007	0.178672	SPDEF	ENST00000395076.4|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr8_-_101964738_101964780	0.175753	SPDEF	ENST00000523938.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr4_+_48833160_48833174	0.175395	SPDEF	ENST00000506801.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr14_+_67826709_67826751	0.17424	SPDEF	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr2_+_63816087_63816124	0.173459	SPDEF	ENST00000409908.1|MDH1|ENSG00000014641.13|malate dehydrogenase 1, NAD (soluble) 	ENST00000442225.1|MDH1|ENSG00000014641.13|malate dehydrogenase 1, NAD (soluble) 	ENST00000409476.1|MDH1|ENSG00000014641.13|malate dehydrogenase 1, NAD (soluble) 	ENST00000436321.1|MDH1|ENSG00000014641.13|malate dehydrogenase 1, NAD (soluble)
hg19_v2_chr3_-_37217736_37217753	0.171716	SPDEF	ENST00000438374.1|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2
hg19_v2_chr2_-_54014055_54014123	0.170448	SPDEF	ENST00000263634.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406687.1|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough
hg19_v2_chr1_+_22351977_22352027	0.17037	SPDEF	ENST00000420503.1|LINC00339|ENSG00000218510.3|long intergenic non-protein coding RNA 339 	ENST00000416769.1|LINC00339|ENSG00000218510.3|long intergenic non-protein coding RNA 339 	ENST00000404210.2|LINC00339|ENSG00000218510.3|long intergenic non-protein coding RNA 339
hg19_v2_chr5_+_76326187_76326300	0.16879	SPDEF	ENST00000312916.7|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1 	ENST00000506806.1|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1
hg19_v2_chr3_+_197464046_197464069	0.166229	SPDEF	ENST00000428738.1|FYTTD1|ENSG00000122068.8|forty-two-three domain containing 1
hg19_v2_chr2_+_162016916_162016954	0.164295	SPDEF	ENST00000405852.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr14_-_69864993_69865056	0.164223	SPDEF	ENST00000555373.1|ERH|ENSG00000100632.6|enhancer of rudimentary homolog (Drosophila)
hg19_v2_chr2_+_37311588_37311602	0.161937	SPDEF	ENST00000409774.1|GPATCH11|ENSG00000152133.10|G patch domain containing 11 	ENST00000608836.1|GPATCH11|ENSG00000152133.10|G patch domain containing 11
hg19_v2_chr2_+_39103103_39103209	0.160265	SPDEF	ENST00000340556.6|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000410014.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409665.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409077.2|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409131.2|MORN2|ENSG00000188010.8|MORN repeat containing 2
hg19_v2_chr20_+_60962143_60962172	0.15996	SPDEF	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chr4_+_48833234_48833245	0.158604	SPDEF	ENST00000510824.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000425583.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr11_-_119993734_119993778	0.157555	SPDEF	ENST00000533302.1|TRIM29|ENSG00000137699.12|tripartite motif containing 29
hg19_v2_chr14_+_21566980_21567097	0.156356	SPDEF	ENST00000418511.2|TMEM253|ENSG00000232070.4|transmembrane protein 253 	ENST00000554329.2|TMEM253|ENSG00000232070.4|transmembrane protein 253
hg19_v2_chr1_+_84630574_84630602	0.156286	SPDEF	ENST00000413538.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta 	ENST00000417530.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr7_+_99613195_99613206	0.154293	SPDEF	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr12_+_106751436_106751539	0.153709	SPDEF	ENST00000228347.4|POLR3B|ENSG00000013503.5|polymerase (RNA) III (DNA directed) polypeptide B
hg19_v2_chr4_-_44728559_44728612	0.150554	SPDEF	ENST00000509756.1|GNPDA2|ENSG00000163281.7|glucosamine-6-phosphate deaminase 2 	ENST00000507917.1|GNPDA2|ENSG00000163281.7|glucosamine-6-phosphate deaminase 2 	ENST00000295448.3|GNPDA2|ENSG00000163281.7|glucosamine-6-phosphate deaminase 2
hg19_v2_chr12_+_50135351_50135391	0.150515	SPDEF	ENST00000549445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550951.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000549385.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000548713.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000548201.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr8_-_56987061_56987069	0.150312	SPDEF	ENST00000009589.3|RPS20|ENSG00000008988.5|ribosomal protein S20 	ENST00000524349.1|RPS20|ENSG00000008988.5|ribosomal protein S20 	ENST00000519606.1|RPS20|ENSG00000008988.5|ribosomal protein S20 	ENST00000519807.1|RPS20|ENSG00000008988.5|ribosomal protein S20 	ENST00000521262.1|RPS20|ENSG00000008988.5|ribosomal protein S20 	ENST00000520627.1|RPS20|ENSG00000008988.5|ribosomal protein S20
hg19_v2_chr2_+_48667898_48667981	0.15028	SPDEF	ENST00000281394.4|PPP1R21|ENSG00000162869.11|protein phosphatase 1, regulatory subunit 21 	ENST00000294952.8|PPP1R21|ENSG00000162869.11|protein phosphatase 1, regulatory subunit 21
hg19_v2_chr15_-_65809581_65809617	0.149747	SPDEF	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr21_-_46221684_46221703	0.149713	SPDEF	ENST00000330942.5|UBE2G2|ENSG00000184787.14|ubiquitin-conjugating enzyme E2G 2
hg19_v2_chr4_+_144106080_144106144	0.149566	SPDEF	ENST00000307017.4|USP38|ENSG00000170185.5|ubiquitin specific peptidase 38
hg19_v2_chr18_+_21032781_21032795	0.148983	SPDEF	ENST00000339486.3|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr17_-_56082455_56082614	0.146014	SPDEF	ENST00000578794.1|RP11-159D12.5|ENSG00000266086.1|Uncharacterized protein
hg19_v2_chr3_-_156272924_156272973	0.145568	SPDEF	ENST00000467789.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma) 	ENST00000265044.2|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr4_+_41992489_41992561	0.142659	SPDEF	ENST00000264451.7|SLC30A9|ENSG00000014824.9|solute carrier family 30 (zinc transporter), member 9
hg19_v2_chr14_+_24701870_24701956	0.141237	SPDEF	ENST00000561035.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559409.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000558865.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000558279.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr7_+_114562172_114562243	0.139404	SPDEF	ENST00000393486.1|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing 	ENST00000257724.3|MDFIC|ENSG00000135272.5|MyoD family inhibitor domain containing
hg19_v2_chr3_+_29322437_29322473	0.138868	SPDEF	ENST00000434693.2|RBMS3|ENSG00000144642.16|RNA binding motif, single stranded interacting protein 3
hg19_v2_chr6_-_150039249_150039392	0.137993	SPDEF	ENST00000543571.1|LATS1|ENSG00000131023.8|large tumor suppressor kinase 1
hg19_v2_chr8_+_8860314_8860388	0.137646	SPDEF	ENST00000250263.7|ERI1|ENSG00000104626.10|exoribonuclease 1 	ENST00000519292.1|ERI1|ENSG00000104626.10|exoribonuclease 1
hg19_v2_chr2_+_27805971_27805981	0.135958	SPDEF	ENST00000413371.2|ZNF512|ENSG00000243943.5|zinc finger protein 512
hg19_v2_chrX_-_122866874_122866911	0.135673	SPDEF	ENST00000245838.8|THOC2|ENSG00000125676.15|THO complex 2 	ENST00000355725.4|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr2_+_65454926_65454991	0.134931	SPDEF	ENST00000542850.1|ACTR2|ENSG00000138071.9|ARP2 actin-related protein 2 homolog (yeast) 	ENST00000377982.4|ACTR2|ENSG00000138071.9|ARP2 actin-related protein 2 homolog (yeast)
hg19_v2_chr12_-_69080590_69080644	0.134568	SPDEF	ENST00000433116.2|RP11-637A17.2|ENSG00000247363.2|RP11-637A17.2	ENST00000500695.2|RP11-637A17.2|ENSG00000247363.2|RP11-637A17.2
hg19_v2_chr8_-_101964832_101964852	0.134199	SPDEF	ENST00000523131.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000418997.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr4_+_159593418_159593517	0.133071	SPDEF	ENST00000507475.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase 	ENST00000307738.5|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase
hg19_v2_chr6_-_150039170_150039242	0.131582	SPDEF	ENST00000458696.2|LATS1|ENSG00000131023.8|large tumor suppressor kinase 1 	ENST00000392273.3|LATS1|ENSG00000131023.8|large tumor suppressor kinase 1
hg19_v2_chr2_+_47596634_47596698	0.130636	SPDEF	ENST00000419334.1|EPCAM|ENSG00000119888.6|epithelial cell adhesion molecule
hg19_v2_chr7_+_99613212_99613236	0.129316	SPDEF	ENST00000426572.1|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1 	ENST00000535170.1|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr1_-_235324772_235324849	0.129303	SPDEF	ENST00000408888.3|RBM34|ENSG00000188739.10|RNA binding motif protein 34
hg19_v2_chr12_+_69080734_69080808	0.128827	SPDEF	ENST00000378905.2|NUP107|ENSG00000111581.5|nucleoporin 107kDa
hg19_v2_chr1_+_65886244_65886250	0.128398	SPDEF	ENST00000344610.8|LEPR|ENSG00000116678.14|leptin receptor
hg19_v2_chr14_-_24615523_24615569	0.127456	SPDEF	ENST00000559056.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr18_+_21033239_21033302	0.127098	SPDEF	ENST00000581585.1|RIOK3|ENSG00000101782.10|RIO kinase 3 	ENST00000577501.1|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr1_+_84630645_84630652	0.127066	SPDEF	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr18_+_19321281_19321334	0.124768	SPDEF	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr2_+_65454863_65454889	0.122294	SPDEF	ENST00000260641.5|ACTR2|ENSG00000138071.9|ARP2 actin-related protein 2 homolog (yeast)
hg19_v2_chr3_-_37218023_37218069	0.120016	SPDEF	ENST00000416425.1|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2
hg19_v2_chr12_+_50135327_50135346	0.118541	SPDEF	ENST00000549966.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000547832.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000547187.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000548894.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000546914.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000552699.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000267115.5|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr5_+_93954039_93954052	0.116649	SPDEF	ENST00000265140.5|ANKRD32|ENSG00000133302.8|ankyrin repeat domain 32
hg19_v2_chr11_-_61197406_61197464	0.116433	SPDEF	ENST00000541963.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000477890.2|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa
hg19_v2_chr14_+_24701819_24701869	0.113066	SPDEF	ENST00000560139.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559910.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr12_-_120663792_120663872	0.112063	SPDEF	ENST00000546532.1|PXN|ENSG00000089159.11|paxillin 	ENST00000548912.1|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr2_+_37311645_37311692	0.111955	SPDEF	ENST00000281932.5|GPATCH11|ENSG00000152133.10|G patch domain containing 11
hg19_v2_chr15_-_44092295_44092423	0.10861	SPDEF	ENST00000249714.3|SERINC4|ENSG00000184716.9|serine incorporator 4 	ENST00000299969.6|SERINC4|ENSG00000184716.9|serine incorporator 4 	ENST00000319327.6|SERINC4|ENSG00000184716.9|serine incorporator 4
hg19_v2_chr10_+_5726764_5726911	0.108061	SPDEF	ENST00000328090.5|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B 	ENST00000496681.1|FAM208B|ENSG00000108021.15|family with sequence similarity 208, member B
hg19_v2_chr1_+_24829384_24829443	0.106472	SPDEF	ENST00000374395.4|RCAN3|ENSG00000117602.7|RCAN family member 3 	ENST00000436717.2|RCAN3|ENSG00000117602.7|RCAN family member 3
hg19_v2_chr18_-_55288973_55289085	0.106277	SPDEF	ENST00000423481.2|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000587194.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000591599.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase 	ENST00000588661.1|NARS|ENSG00000134440.7|asparaginyl-tRNA synthetase
hg19_v2_chr17_-_47755436_47755596	0.104142	SPDEF	ENST00000505581.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000514121.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393328.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000509079.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000393331.3|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000347630.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000504102.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr3_-_69101461_69101494	0.103808	SPDEF	ENST00000543976.1|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr16_-_70557430_70557469	0.103381	SPDEF	ENST00000393612.4|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4 	ENST00000564653.1|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4 	ENST00000323786.5|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4
hg19_v2_chr12_+_132434439_132434555	0.101757	SPDEF	ENST00000333577.4|EP400|ENSG00000183495.9|E1A binding protein p400 	ENST00000389561.2|EP400|ENSG00000183495.9|E1A binding protein p400 	ENST00000389562.2|EP400|ENSG00000183495.9|E1A binding protein p400 	ENST00000332482.4|EP400|ENSG00000183495.9|E1A binding protein p400 	ENST00000330386.6|EP400|ENSG00000183495.9|E1A binding protein p400
hg19_v2_chr19_-_8579030_8579061	0.0997907	SPDEF	ENST00000255616.8|ZNF414|ENSG00000133250.9|zinc finger protein 414 	ENST00000393927.4|ZNF414|ENSG00000133250.9|zinc finger protein 414
hg19_v2_chr5_-_114961673_114961746	0.0986895	SPDEF	ENST00000333314.3|TMED7-TICAM2|ENSG00000251201.4|TMED7-TICAM2 readthrough
hg19_v2_chr6_+_7541808_7541825	0.0974138	SPDEF	ENST00000379802.3|DSP|ENSG00000096696.9|desmoplakin
hg19_v2_chr1_+_213224572_213224686	0.0956727	SPDEF	ENST00000543470.1|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000366960.3|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000366959.3|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1 	ENST00000543354.1|RPS6KC1|ENSG00000136643.7|ribosomal protein S6 kinase, 52kDa, polypeptide 1
hg19_v2_chr1_+_169337172_169337250	0.0952351	SPDEF	ENST00000367807.3|BLZF1|ENSG00000117475.9|basic leucine zipper nuclear factor 1 	ENST00000367808.3|BLZF1|ENSG00000117475.9|basic leucine zipper nuclear factor 1 	ENST00000329281.2|BLZF1|ENSG00000117475.9|basic leucine zipper nuclear factor 1 	ENST00000420531.1|BLZF1|ENSG00000117475.9|basic leucine zipper nuclear factor 1
hg19_v2_chr11_+_36616355_36616402	0.0949858	SPDEF	ENST00000532470.2|C11orf74|ENSG00000166352.11|chromosome 11 open reading frame 74
hg19_v2_chr22_-_41215291_41215326	0.0948602	SPDEF	ENST00000542412.1|SLC25A17|ENSG00000100372.10|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 	ENST00000544408.1|SLC25A17|ENSG00000100372.10|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
hg19_v2_chr11_+_61197508_61197545	0.0937892	SPDEF	ENST00000541135.1|RP11-286N22.8|ENSG00000256591.1|Uncharacterized protein  	ENST00000301761.2|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr21_-_36421626_36421641	0.0932382	SPDEF	ENST00000300305.3|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr1_-_193028632_193028651	0.0924807	SPDEF	ENST00000421683.1|UCHL5|ENSG00000116750.9|ubiquitin carboxyl-terminal hydrolase L5
hg19_v2_chr6_-_116381918_116381977	0.0889084	SPDEF	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr10_-_14996017_14996069	0.0887628	SPDEF	ENST00000378241.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000456122.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000418843.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000378249.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000396817.2|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000378255.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000378254.1|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000378278.2|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C 	ENST00000357717.2|DCLRE1C|ENSG00000152457.13|DNA cross-link repair 1C
hg19_v2_chr11_-_46142948_46143043	0.0880866	SPDEF	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr8_-_101734170_101734264	0.0878068	SPDEF	ENST00000522387.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000518196.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr1_+_43124087_43124183	0.0877606	SPDEF	ENST00000304979.3|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000372550.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H) 	ENST00000440068.1|PPIH|ENSG00000171960.6|peptidylprolyl isomerase H (cyclophilin H)
hg19_v2_chr4_-_159592996_159593059	0.0876277	SPDEF	ENST00000508457.1|C4orf46|ENSG00000205208.4|chromosome 4 open reading frame 46
hg19_v2_chr19_-_56632592_56632670	0.0872403	SPDEF	ENST00000587279.1|ZNF787|ENSG00000142409.4|zinc finger protein 787 	ENST00000270459.3|ZNF787|ENSG00000142409.4|zinc finger protein 787
hg19_v2_chr5_+_31532373_31532479	0.0870697	SPDEF	ENST00000325366.9|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000355907.3|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22 	ENST00000507818.2|C5orf22|ENSG00000082213.13|chromosome 5 open reading frame 22
hg19_v2_chr11_+_57480046_57480092	0.0851572	SPDEF	ENST00000378312.4|TMX2|ENSG00000213593.5|thioredoxin-related transmembrane protein 2 	ENST00000278422.4|TMX2|ENSG00000213593.5|thioredoxin-related transmembrane protein 2
hg19_v2_chr20_+_49126881_49126936	0.0850544	SPDEF	ENST00000371621.3|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1 	ENST00000541713.1|PTPN1|ENSG00000196396.5|protein tyrosine phosphatase, non-receptor type 1
hg19_v2_chr11_-_61129306_61129330	0.084965	SPDEF	ENST00000544118.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3
hg19_v2_chr14_+_24702073_24702082	0.0835796	SPDEF	ENST00000399440.2|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr6_-_143832820_143832875	0.0830053	SPDEF	ENST00000002165.6|FUCA2|ENSG00000001036.9|fucosidase, alpha-L- 2, plasma
hg19_v2_chr12_+_118814185_118814332	0.0827087	SPDEF	ENST00000543473.1|SUDS3|ENSG00000111707.7|suppressor of defective silencing 3 homolog (S. cerevisiae)
hg19_v2_chr16_-_2318111_2318147	0.0822513	SPDEF	ENST00000301730.8|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000564822.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr3_-_69101413_69101457	0.0818991	SPDEF	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chr15_-_55700457_55700520	0.0817183	SPDEF	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr1_+_169337412_169337497	0.0812465	SPDEF	ENST00000426663.1|BLZF1|ENSG00000117475.9|basic leucine zipper nuclear factor 1
hg19_v2_chr8_-_101965104_101965119	0.0810217	SPDEF	ENST00000437293.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr11_-_57479673_57479698	0.0807829	SPDEF	ENST00000337672.2|MED19|ENSG00000156603.10|mediator complex subunit 19 	ENST00000431606.2|MED19|ENSG00000156603.10|mediator complex subunit 19
hg19_v2_chr2_+_187350883_187350962	0.0806812	SPDEF	ENST00000337859.6|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr11_-_94706705_94706776	0.0801437	SPDEF	ENST00000279839.6|CWC15|ENSG00000150316.7|CWC15 spliceosome-associated protein homolog (S. cerevisiae)
hg19_v2_chr12_-_102513843_102513908	0.0797256	SPDEF	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr14_-_78083112_78083140	0.0788693	SPDEF	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr3_-_32612263_32612366	0.0788034	SPDEF	ENST00000432458.2|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1 	ENST00000424991.1|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1 	ENST00000273130.4|DYNC1LI1|ENSG00000144635.4|dynein, cytoplasmic 1, light intermediate chain 1
hg19_v2_chr21_-_36421535_36421610	0.0787808	SPDEF	ENST00000416754.1|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000437180.1|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000455571.1|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr7_-_6098770_6098861	0.0770826	SPDEF	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr1_+_84630367_84630400	0.0769295	SPDEF	ENST00000370680.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr9_+_34458771_34458850	0.0760375	SPDEF	ENST00000437363.1|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1 	ENST00000242317.4|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1
hg19_v2_chr15_-_55700522_55700708	0.0759483	SPDEF	ENST00000564092.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000310958.6|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr2_+_48667983_48668003	0.0754157	SPDEF	ENST00000449090.2|PPP1R21|ENSG00000162869.11|protein phosphatase 1, regulatory subunit 21
hg19_v2_chr14_+_24701628_24701730	0.0749558	SPDEF	ENST00000355299.4|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559836.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr15_-_102192567_102192597	0.0740531	SPDEF	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr2_-_37311445_37311534	0.0725352	SPDEF	ENST00000233099.5|HEATR5B|ENSG00000008869.7|HEAT repeat containing 5B 	ENST00000354531.2|HEATR5B|ENSG00000008869.7|HEAT repeat containing 5B
hg19_v2_chr16_+_22019404_22019604	0.0721848	SPDEF	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr12_+_50135588_50135605	0.0721103	SPDEF	ENST00000423828.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chrX_+_153775869_153775905	0.0719115	SPDEF	ENST00000424839.1|IKBKG|ENSG00000073009.8|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
hg19_v2_chr17_-_62658186_62658231	0.0718327	SPDEF	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr2_+_66662690_66662711	0.071612	SPDEF	ENST00000488550.1|MEIS1|ENSG00000143995.15|Meis homeobox 1
hg19_v2_chr4_+_153701081_153701164	0.0713948	SPDEF	ENST00000451320.2|ARFIP1|ENSG00000164144.10|ADP-ribosylation factor interacting protein 1 	ENST00000429148.2|ARFIP1|ENSG00000164144.10|ADP-ribosylation factor interacting protein 1 	ENST00000353617.2|ARFIP1|ENSG00000164144.10|ADP-ribosylation factor interacting protein 1 	ENST00000405727.2|ARFIP1|ENSG00000164144.10|ADP-ribosylation factor interacting protein 1 	ENST00000356064.3|ARFIP1|ENSG00000164144.10|ADP-ribosylation factor interacting protein 1
hg19_v2_chr5_+_892745_892763	0.0701968	SPDEF	ENST00000166345.3|TRIP13|ENSG00000071539.9|thyroid hormone receptor interactor 13
hg19_v2_chr19_-_41220540_41220562	0.0701405	SPDEF	ENST00000594490.1|ADCK4|ENSG00000123815.7|aarF domain containing kinase 4
hg19_v2_chr11_-_130786333_130786399	0.0697802	SPDEF	ENST00000533214.1|SNX19|ENSG00000120451.6|sorting nexin 19 	ENST00000528555.1|SNX19|ENSG00000120451.6|sorting nexin 19 	ENST00000530356.1|SNX19|ENSG00000120451.6|sorting nexin 19 	ENST00000539184.1|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chr9_-_86571628_86571639	0.069417	SPDEF	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr12_+_118814344_118814369	0.0688143	SPDEF	ENST00000397564.2|SUDS3|ENSG00000111707.7|suppressor of defective silencing 3 homolog (S. cerevisiae)
hg19_v2_chr1_+_39456895_39456986	0.0677822	SPDEF	ENST00000432648.3|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000446189.2|AKIRIN1|ENSG00000174574.11|akirin 1 	ENST00000372984.4|AKIRIN1|ENSG00000174574.11|akirin 1
hg19_v2_chr6_+_33257427_33257552	0.0668344	SPDEF	ENST00000463584.1|PFDN6|ENSG00000204220.5|prefoldin subunit 6
hg19_v2_chr5_+_86564739_86564791	0.0666801	SPDEF	ENST00000456692.2|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000512763.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1 	ENST00000506290.1|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr2_-_27294500_27294641	0.066039	SPDEF	ENST00000447619.1|OST4|ENSG00000228474.1|oligosaccharyltransferase 4 homolog (S. cerevisiae) 	ENST00000429985.1|OST4|ENSG00000228474.1|oligosaccharyltransferase 4 homolog (S. cerevisiae) 	ENST00000456793.1|OST4|ENSG00000228474.1|oligosaccharyltransferase 4 homolog (S. cerevisiae)
hg19_v2_chr11_+_57435441_57435628	0.06432	SPDEF	ENST00000528177.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr16_+_23652773_23652850	0.0638921	SPDEF	ENST00000563998.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568589.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568272.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25)
hg19_v2_chr12_+_109490370_109490447	0.0638848	SPDEF	ENST00000257548.5|USP30|ENSG00000135093.8|ubiquitin specific peptidase 30 	ENST00000536723.1|USP30|ENSG00000135093.8|ubiquitin specific peptidase 30 	ENST00000536393.1|USP30|ENSG00000135093.8|ubiquitin specific peptidase 30
hg19_v2_chr17_-_45908875_45908913	0.0637237	SPDEF	ENST00000351111.2|MRPL10|ENSG00000159111.8|mitochondrial ribosomal protein L10 	ENST00000414011.1|MRPL10|ENSG00000159111.8|mitochondrial ribosomal protein L10
hg19_v2_chr15_-_55700216_55700293	0.0630334	SPDEF	ENST00000569205.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr4_-_44728530_44728544	0.0618701	SPDEF	ENST00000507534.1|GNPDA2|ENSG00000163281.7|glucosamine-6-phosphate deaminase 2
hg19_v2_chrX_-_135962876_135962896	0.0610562	SPDEF	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr8_-_117768023_117768069	0.0605621	SPDEF	ENST00000518949.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000522453.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000521861.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000518995.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H
hg19_v2_chr14_+_89029366_89029478	0.0605102	SPDEF	ENST00000555799.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000555755.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000393514.5|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr3_+_196669494_196669586	0.0602272	SPDEF	ENST00000602845.1|NCBP2-AS2|ENSG00000270170.1|NCBP2 antisense RNA 2 (head to head)
hg19_v2_chr8_+_100025476_100025548	0.0596331	SPDEF	ENST00000355155.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000357162.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000358544.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000395996.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000441350.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast)
hg19_v2_chr16_+_25123148_25123253	0.0595783	SPDEF	ENST00000570981.1|LCMT1|ENSG00000205629.7|leucine carboxyl methyltransferase 1
hg19_v2_chr17_-_7835228_7835441	0.0594001	SPDEF	ENST00000303731.4|TRAPPC1|ENSG00000170043.7|trafficking protein particle complex 1 	ENST00000571947.1|TRAPPC1|ENSG00000170043.7|trafficking protein particle complex 1 	ENST00000540486.1|TRAPPC1|ENSG00000170043.7|trafficking protein particle complex 1 	ENST00000572656.1|TRAPPC1|ENSG00000170043.7|trafficking protein particle complex 1
hg19_v2_chr3_-_37217756_37217851	0.0587651	SPDEF	ENST00000440230.1|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2 	ENST00000421276.2|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2 	ENST00000421307.1|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2 	ENST00000354379.4|LRRFIP2|ENSG00000093167.13|leucine rich repeat (in FLII) interacting protein 2
hg19_v2_chr4_+_48833070_48833118	0.0581503	SPDEF	ENST00000511662.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000508996.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000507210.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000264312.7|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000396448.2|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000512236.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000509164.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000511102.1|OCIAD1|ENSG00000109180.10|OCIA domain containing 1 	ENST00000381473.3|OCIAD1|ENSG00000109180.10|OCIA domain containing 1
hg19_v2_chr1_-_184723942_184724047	0.0579999	SPDEF	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr1_-_235324530_235324613	0.0572913	SPDEF	ENST00000447801.1|RBM34|ENSG00000188739.10|RNA binding motif protein 34 	ENST00000366606.3|RBM34|ENSG00000188739.10|RNA binding motif protein 34 	ENST00000429912.1|RBM34|ENSG00000188739.10|RNA binding motif protein 34
hg19_v2_chr1_+_110091189_110091268	0.057003	SPDEF	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr1_-_20126365_20126414	0.056961	SPDEF	ENST00000294543.6|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4 	ENST00000375122.2|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4
hg19_v2_chr17_-_56065484_56065513	0.0558281	SPDEF	ENST00000581208.1|VEZF1|ENSG00000136451.4|vascular endothelial zinc finger 1
hg19_v2_chr2_+_198380763_198380884	0.0555467	SPDEF	ENST00000448447.2|MOB4|ENSG00000115540.10|MOB family member 4, phocein 	ENST00000409360.1|MOB4|ENSG00000115540.10|MOB family member 4, phocein
hg19_v2_chr3_-_196669248_196669282	0.0551275	SPDEF	ENST00000447325.1|NCBP2|ENSG00000114503.6|nuclear cap binding protein subunit 2, 20kDa
hg19_v2_chr14_+_89029253_89029318	0.054311	SPDEF	ENST00000251038.5|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000359301.3|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000302216.8|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr4_-_39640700_39640712	0.0541823	SPDEF	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chrX_+_117629766_117629872	0.0540499	SPDEF	ENST00000276204.6|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11 	ENST00000276202.7|DOCK11|ENSG00000147251.11|dedicator of cytokinesis 11
hg19_v2_chr16_+_77224732_77224887	0.0531353	SPDEF	ENST00000569610.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000248248.3|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000567291.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000320859.6|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563612.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563279.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B
hg19_v2_chr17_-_35969409_35969544	0.0526204	SPDEF	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr12_-_132905789_132905789	0.0525188	SPDEF	ENST00000328957.8|GALNT9|ENSG00000182870.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)
hg19_v2_chr1_+_24117693_24117717	0.0523318	SPDEF	ENST00000374503.3|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374502.3|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr11_-_130786400_130786407	0.0483954	SPDEF	ENST00000265909.4|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chrX_-_154299501_154299637	0.0483328	SPDEF	ENST00000369476.3|MTCP1|ENSG00000214827.5|mature T-cell proliferation 1 	ENST00000369484.3|CMC4|ENSG00000182712.11|C-x(9)-C motif containing 4
hg19_v2_chr2_+_187350973_187351072	0.0478486	SPDEF	ENST00000544130.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr12_+_50794730_50794784	0.0473344	SPDEF	ENST00000523389.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000518561.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000347328.5|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000550260.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4
hg19_v2_chr6_-_139308777_139309128	0.0467491	SPDEF	ENST00000529597.1|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1 	ENST00000415951.2|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1 	ENST00000367663.4|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1 	ENST00000409812.2|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1
hg19_v2_chr6_-_36953833_36954074	0.0460569	SPDEF	ENST00000538808.1|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000460219.1|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000373616.5|MTCH1|ENSG00000137409.14|mitochondrial carrier 1 	ENST00000373627.5|MTCH1|ENSG00000137409.14|mitochondrial carrier 1
hg19_v2_chrX_+_69509870_69509908	0.045395	SPDEF	ENST00000374388.3|KIF4A|ENSG00000090889.10|kinesin family member 4A
hg19_v2_chr14_-_75593708_75593783	0.0450927	SPDEF	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr19_-_55690758_55690780	0.0449312	SPDEF	ENST00000590851.1|SYT5|ENSG00000129990.10|synaptotagmin V
hg19_v2_chr11_+_94706973_94706987	0.044146	SPDEF	ENST00000536741.1|KDM4D|ENSG00000186280.5|lysine (K)-specific demethylase 4D
hg19_v2_chr13_+_27998681_27998826	0.0440894	SPDEF	ENST00000381140.4|GTF3A|ENSG00000122034.8|general transcription factor IIIA
hg19_v2_chr3_+_38495333_38495422	0.0435474	SPDEF	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr6_-_30524951_30524957	0.0435421	SPDEF	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr5_-_99870890_99870924	0.0430561	SPDEF	ENST00000499025.1|CTD-2001C12.1|ENSG00000247877.2|CTD-2001C12.1
hg19_v2_chr17_-_47755338_47755433	0.0430371	SPDEF	ENST00000508805.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000515508.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000451526.2|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000507970.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr8_-_101965146_101965236	0.042883	SPDEF	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr5_-_31532160_31532221	0.0419682	SPDEF	ENST00000511367.2|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III 	ENST00000513349.1|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III
hg19_v2_chr7_+_91875508_91875559	0.0401677	SPDEF	ENST00000265742.3|ANKIB1|ENSG00000001629.5|ankyrin repeat and IBR domain containing 1
hg19_v2_chr3_+_33840050_33840177	0.0399895	SPDEF	ENST00000457054.2|PDCD6IP|ENSG00000170248.9|programmed cell death 6 interacting protein 	ENST00000413073.1|PDCD6IP|ENSG00000170248.9|programmed cell death 6 interacting protein
hg19_v2_chr11_-_33183006_33183046	0.0392534	SPDEF	ENST00000524827.1|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000323959.4|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000431742.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr1_-_28969517_28969605	0.0381047	SPDEF	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr1_+_24117662_24117682	0.0379166	SPDEF	ENST00000420982.1|LYPLA2|ENSG00000011009.6|lysophospholipase II 	ENST00000374505.2|LYPLA2|ENSG00000011009.6|lysophospholipase II
hg19_v2_chr4_-_83812248_83812401	0.0370838	SPDEF	ENST00000514326.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000505434.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000503058.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000348405.4|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000505984.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000513858.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000508479.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000443462.2|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000508502.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000509142.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000432794.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000448323.1|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000326950.5|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae) 	ENST00000311785.7|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr1_-_28415075_28415165	0.0369688	SPDEF	ENST00000373863.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila) 	ENST00000436342.2|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila) 	ENST00000540618.1|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila) 	ENST00000545175.1|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr8_-_101964265_101964357	0.036111	SPDEF	ENST00000395958.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr12_+_57914742_57914754	0.0355888	SPDEF	ENST00000551351.1|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr2_-_68479614_68479685	0.0344272	SPDEF	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr4_+_159593271_159593295	0.0325316	SPDEF	ENST00000512251.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase 	ENST00000511912.1|ETFDH|ENSG00000171503.7|electron-transferring-flavoprotein dehydrogenase
hg19_v2_chr1_+_84630352_84630364	0.0314463	SPDEF	ENST00000450730.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr15_-_65809991_65810037	0.0311956	SPDEF	ENST00000559526.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000358939.4|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000560665.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000321118.7|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000339244.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000300141.6|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr6_-_139309378_139309427	0.0305524	SPDEF	ENST00000450536.2|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1 	ENST00000258062.5|REPS1|ENSG00000135597.14|RALBP1 associated Eps domain containing 1
hg19_v2_chr22_-_41215328_41215395	0.0301449	SPDEF	ENST00000434185.1|SLC25A17|ENSG00000100372.10|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 	ENST00000435456.2|SLC25A17|ENSG00000100372.10|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
hg19_v2_chr2_+_54014168_54014220	0.0297963	SPDEF	ENST00000405123.3|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1 	ENST00000185150.4|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1 	ENST00000378239.5|ERLEC1|ENSG00000068912.9|endoplasmic reticulum lectin 1
hg19_v2_chr1_+_203765437_203765437	0.0294374	SPDEF	ENST00000550078.1|ZBED6|ENSG00000257315.1|zinc finger, BED-type containing 6
hg19_v2_chr4_-_159593179_159593220	0.0288272	SPDEF	ENST00000379205.4|C4orf46|ENSG00000205208.4|chromosome 4 open reading frame 46
hg19_v2_chr3_-_196669371_196669468	0.0283322	SPDEF	ENST00000427641.2|NCBP2|ENSG00000114503.6|nuclear cap binding protein subunit 2, 20kDa 	ENST00000321256.5|NCBP2|ENSG00000114503.6|nuclear cap binding protein subunit 2, 20kDa
hg19_v2_chr14_-_21737610_21737653	0.0279646	SPDEF	ENST00000320084.7|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000449098.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000336053.6|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2)
hg19_v2_chr17_-_27277615_27277700	0.0277933	SPDEF	ENST00000583747.1|PHF12|ENSG00000109118.9|PHD finger protein 12 	ENST00000584236.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr2_+_178077477_178077525	0.0271031	SPDEF	ENST00000411529.2|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3 	ENST00000435711.1|HNRNPA3|ENSG00000170144.14|heterogeneous nuclear ribonucleoprotein A3
hg19_v2_chr1_-_153895377_153895465	0.0269825	SPDEF	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr4_+_141445311_141445332	0.0267819	SPDEF	ENST00000323570.3|ELMOD2|ENSG00000179387.5|ELMO/CED-12 domain containing 2 	ENST00000511887.2|ELMOD2|ENSG00000179387.5|ELMO/CED-12 domain containing 2
hg19_v2_chr1_-_28415204_28415227	0.0265636	SPDEF	ENST00000373871.3|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chr4_-_83295103_83295157	0.0265264	SPDEF	ENST00000313899.7|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000352301.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000509107.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000353341.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000541060.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chrX_+_123480194_123480210	0.0258997	SPDEF	ENST00000371139.4|SH2D1A|ENSG00000183918.10|SH2 domain containing 1A
hg19_v2_chr4_-_83812402_83812419	0.0258833	SPDEF	ENST00000395310.2|SEC31A|ENSG00000138674.12|SEC31 homolog A (S. cerevisiae)
hg19_v2_chr3_+_100428316_100428471	0.0244835	SPDEF	ENST00000479672.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000476228.1|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000463568.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr6_+_36853607_36853640	0.0218088	SPDEF	ENST00000480824.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000355190.3|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000373685.1|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89
hg19_v2_chr14_-_21737551_21737608	0.021316	SPDEF	ENST00000554891.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000555883.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000553753.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000555914.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000557336.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000555215.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000556628.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000555137.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000556226.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000555309.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000556142.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000554969.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000554455.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000556513.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000557201.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000420743.2|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000557768.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000553300.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000554383.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2) 	ENST00000554539.1|HNRNPC|ENSG00000092199.13|heterogeneous nuclear ribonucleoprotein C (C1/C2)
hg19_v2_chr11_-_71823715_71823792	0.0201085	SPDEF	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr20_-_42839378_42839477	0.0199732	SPDEF	ENST00000255174.2|OSER1|ENSG00000132823.6|oxidative stress responsive serine-rich 1
hg19_v2_chr10_-_120840309_120840338	0.0194739	SPDEF	ENST00000369144.3|EIF3A|ENSG00000107581.8|eukaryotic translation initiation factor 3, subunit A
hg19_v2_chr16_+_70557685_70557796	0.0192025	SPDEF	ENST00000302516.5|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000566095.2|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000577085.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000567654.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa
hg19_v2_chr3_-_139108475_139108574	0.0189578	SPDEF	ENST00000515006.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime) 	ENST00000513274.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime) 	ENST00000514508.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime) 	ENST00000507777.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime) 	ENST00000512153.1|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime) 	ENST00000333188.5|COPB2|ENSG00000184432.5|coatomer protein complex, subunit beta 2 (beta prime)
hg19_v2_chr2_-_128785619_128785640	0.0171345	SPDEF	ENST00000450957.1|SAP130|ENSG00000136715.13|Sin3A-associated protein, 130kDa
hg19_v2_chr2_-_39103014_39103084	0.0164993	SPDEF	ENST00000295373.6|DHX57|ENSG00000163214.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENST00000417233.1|DHX57|ENSG00000163214.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
hg19_v2_chr7_+_11013491_11013553	0.0163394	SPDEF	ENST00000403050.3|PHF14|ENSG00000106443.10|PHD finger protein 14 	ENST00000445996.2|PHF14|ENSG00000106443.10|PHD finger protein 14
hg19_v2_chr2_+_66662249_66662267	0.0156368	SPDEF	ENST00000560281.2|MEIS1|ENSG00000143995.15|Meis homeobox 1
hg19_v2_chr7_+_139025105_139025200	0.0156236	SPDEF	ENST00000541170.3|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr15_+_55700741_55700774	0.0155043	SPDEF	ENST00000569691.1|C15orf65|ENSG00000261652.2|chromosome 15 open reading frame 65
hg19_v2_chr1_+_44435646_44435697	0.0151518	SPDEF	ENST00000255108.3|DPH2|ENSG00000132768.9|DPH2 homolog (S. cerevisiae) 	ENST00000412950.2|DPH2|ENSG00000132768.9|DPH2 homolog (S. cerevisiae) 	ENST00000396758.2|DPH2|ENSG00000132768.9|DPH2 homolog (S. cerevisiae)
hg19_v2_chr14_-_24701539_24701660	0.014682	SPDEF	ENST00000534348.1|NEDD8-MDP1|ENSG00000255526.2|NEDD8-MDP1 readthrough 	ENST00000524927.1|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8 	ENST00000250495.5|NEDD8|ENSG00000129559.8|neural precursor cell expressed, developmentally down-regulated 8
hg19_v2_chr12_+_50794592_50794729	0.0140865	SPDEF	ENST00000293618.8|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000429001.3|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000548174.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000548697.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000548993.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000398473.2|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000522085.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000518444.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4 	ENST00000551886.1|LARP4|ENSG00000161813.16|La ribonucleoprotein domain family, member 4
hg19_v2_chr1_+_43637996_43638036	0.0140385	SPDEF	ENST00000528956.1|WDR65|ENSG00000243710.3|WD repeat domain 65 	ENST00000529956.1|WDR65|ENSG00000243710.3|WD repeat domain 65
hg19_v2_chr17_+_38444115_38444194	0.0131307	SPDEF	ENST00000580824.1|CDC6|ENSG00000094804.5|cell division cycle 6 	ENST00000577249.1|CDC6|ENSG00000094804.5|cell division cycle 6
hg19_v2_chr19_+_7701985_7702038	0.0130228	SPDEF	ENST00000595950.1|STXBP2|ENSG00000076944.10|syntaxin binding protein 2 	ENST00000441779.2|STXBP2|ENSG00000076944.10|syntaxin binding protein 2 	ENST00000221283.5|STXBP2|ENSG00000076944.10|syntaxin binding protein 2 	ENST00000414284.2|STXBP2|ENSG00000076944.10|syntaxin binding protein 2
hg19_v2_chr14_+_69865401_69865426	0.01252	SPDEF	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr17_-_8066250_8066301	0.0118999	SPDEF	ENST00000488857.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000481878.1|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2) 	ENST00000498285.1|RP11-599B13.6|ENSG00000263620.1|Uncharacterized protein  	ENST00000316509.6|VAMP2|ENSG00000220205.4|vesicle-associated membrane protein 2 (synaptobrevin 2)
hg19_v2_chr6_-_170862322_170862429	0.0110828	SPDEF	ENST00000262193.6|PSMB1|ENSG00000008018.8|proteasome (prosome, macropain) subunit, beta type, 1
hg19_v2_chr11_-_133826852_133826906	0.0104114	SPDEF	ENST00000533871.2|IGSF9B|ENSG00000080854.10|immunoglobulin superfamily, member 9B 	ENST00000321016.8|IGSF9B|ENSG00000080854.10|immunoglobulin superfamily, member 9B
hg19_v2_chr15_+_43663257_43663313	0.0103344	SPDEF	ENST00000260383.7|TUBGCP4|ENSG00000137822.8|tubulin, gamma complex associated protein 4 	ENST00000564079.1|TUBGCP4|ENSG00000137822.8|tubulin, gamma complex associated protein 4
hg19_v2_chr7_+_128379346_128379447	0.00938083	SPDEF	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr14_+_89029336_89029363	0.00760885	SPDEF	ENST00000556945.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000556158.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000557607.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr3_-_156272872_156272923	0.0075763	SPDEF	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr17_-_42092313_42092417	0.00643386	SPDEF	ENST00000587529.1|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000206380.3|TMEM101|ENSG00000091947.5|transmembrane protein 101 	ENST00000542039.1|TMEM101|ENSG00000091947.5|transmembrane protein 101
hg19_v2_chr3_+_100428188_100428222	0.00622034	SPDEF	ENST00000418917.2|TFG|ENSG00000114354.8|TRK-fused gene 	ENST00000490574.1|TFG|ENSG00000114354.8|TRK-fused gene
hg19_v2_chr1_-_111506562_111506701	0.00551373	SPDEF	ENST00000485275.2|LRIF1|ENSG00000121931.11|ligand dependent nuclear receptor interacting factor 1 	ENST00000369763.4|LRIF1|ENSG00000121931.11|ligand dependent nuclear receptor interacting factor 1
hg19_v2_chr11_-_61197187_61197399	0.00525347	SPDEF	ENST00000449811.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000413232.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000340437.4|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000539952.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000544585.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa 	ENST00000450000.1|CPSF7|ENSG00000149532.11|cleavage and polyadenylation specific factor 7, 59kDa
hg19_v2_chr3_+_57541975_57542060	0.00494226	SPDEF	ENST00000487257.1|PDE12|ENSG00000174840.8|phosphodiesterase 12 	ENST00000311180.8|PDE12|ENSG00000174840.8|phosphodiesterase 12
hg19_v2_chr1_+_151129103_151129130	0.0043702	SPDEF	ENST00000368910.3|TNFAIP8L2|ENSG00000163154.5|tumor necrosis factor, alpha-induced protein 8-like 2
hg19_v2_chr11_+_111957497_111957623	0.0041104	SPDEF	ENST00000375549.3|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528182.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528048.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000528021.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000526592.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein 	ENST00000525291.1|SDHD|ENSG00000204370.4|succinate dehydrogenase complex, subunit D, integral membrane protein
hg19_v2_chr4_-_83295296_83295352	0.00333992	SPDEF	ENST00000507010.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000503822.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chr20_-_34252759_34252843	0.00309322	SPDEF	ENST00000414711.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000416778.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000397442.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000440240.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000412056.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000352393.4|CPNE1|ENSG00000214078.7|copine I 	ENST00000359646.1|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000458038.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000424458.1|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000420363.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000434795.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000374104.3|RBM12|ENSG00000244462.3|RNA binding motif protein 12 	ENST00000437100.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000414664.1|CPNE1|ENSG00000214078.7|copine I 	ENST00000374114.3|RBM12|ENSG00000244462.3|RNA binding motif protein 12
hg19_v2_chr19_-_19384055_19384121	0.00294276	SPDEF	ENST00000389363.4|TM6SF2|ENSG00000213996.8|transmembrane 6 superfamily member 2
hg19_v2_chr1_-_184723701_184723760	0.00255954	SPDEF	ENST00000367512.3|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chrX_+_69509927_69509970	0.000985608	SPDEF	ENST00000374403.3|KIF4A|ENSG00000090889.10|kinesin family member 4A
hg19_v2_chr12_-_6798410_6798503	0.000273448	SPDEF	ENST00000361959.3|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000436774.2|ZNF384|ENSG00000126746.13|zinc finger protein 384 	ENST00000544482.1|ZNF384|ENSG00000126746.13|zinc finger protein 384
