hg19_v2_chr16_+_30934376_30934392	0.55062	SOX9	ENST00000562798.1|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19 	ENST00000471231.2|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr12_-_49581152_49581241	0.414745	SOX9	ENST00000550811.1|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr11_+_110001723_110001732	0.371988	SOX9	ENST00000528673.1|ZC3H12C|ENSG00000149289.6|zinc finger CCCH-type containing 12C
hg19_v2_chr12_+_27623565_27623565	0.35785	SOX9	ENST00000535986.1|SMCO2|ENSG00000165935.5|single-pass membrane protein with coiled-coil domains 2
hg19_v2_chr17_+_40119801_40119821	0.325301	SOX9	ENST00000585452.1|CNP|ENSG00000173786.12|2',3'-cyclic nucleotide 3' phosphodiesterase
hg19_v2_chr6_+_30687978_30688141	0.321359	SOX9	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr14_-_38036271_38036301	0.310104	SOX9	ENST00000556024.1|RP11-356O9.2|ENSG00000259087.1|RP11-356O9.2
hg19_v2_chr2_+_232573208_232573219	0.279908	SOX9	ENST00000409115.3|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr2_+_232573222_232573249	0.255992	SOX9	ENST00000341369.7|PTMA|ENSG00000187514.10|prothymosin, alpha 	ENST00000409683.1|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr16_+_89989687_89989774	0.221302	SOX9	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr5_+_76012009_76012024	0.215062	SOX9	ENST00000505600.1|F2R|ENSG00000181104.6|coagulation factor II (thrombin) receptor
hg19_v2_chr7_+_129015671_129015685	0.205516	SOX9	ENST00000466993.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr17_-_49124230_49124248	0.200626	SOX9	ENST00000510283.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000510855.1|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr6_-_11232891_11232915	0.199361	SOX9	ENST00000379433.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9 	ENST00000379446.5|NEDD9|ENSG00000111859.12|neural precursor cell expressed, developmentally down-regulated 9
hg19_v2_chr5_-_141338377_141338377	0.196449	SOX9	ENST00000510041.1|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr8_+_42196000_42196021	0.19098	SOX9	ENST00000518925.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000538005.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr12_+_49621658_49621709	0.190309	SOX9	ENST00000541364.1|TUBA1C|ENSG00000167553.10|tubulin, alpha 1c
hg19_v2_chr2_-_240322643_240322661	0.189962	SOX9	ENST00000345617.3|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr3_-_57583130_57583152	0.188602	SOX9	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr22_+_31090793_31090889	0.187865	SOX9	ENST00000332585.6|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000382310.3|OSBP2|ENSG00000184792.11|oxysterol binding protein 2 	ENST00000446658.2|OSBP2|ENSG00000184792.11|oxysterol binding protein 2
hg19_v2_chr8_+_126442563_126442624	0.186625	SOX9	ENST00000311922.3|TRIB1|ENSG00000173334.3|tribbles pseudokinase 1
hg19_v2_chr10_+_97803151_97803348	0.185819	SOX9	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr7_+_129015484_129015519	0.180452	SOX9	ENST00000490911.1|AHCYL2|ENSG00000158467.12|adenosylhomocysteinase-like 2
hg19_v2_chr6_+_29691198_29691241	0.177823	SOX9	ENST00000440587.2|HLA-F|ENSG00000204642.9|major histocompatibility complex, class I, F 	ENST00000434407.2|HLA-F|ENSG00000204642.9|major histocompatibility complex, class I, F
hg19_v2_chr12_-_49582978_49583107	0.17472	SOX9	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr8_+_24151553_24151590	0.174396	SOX9	ENST00000265769.4|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000540823.1|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000397649.3|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr11_+_60691924_60691966	0.170504	SOX9	ENST00000544065.1|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000453848.2|TMEM132A|ENSG00000006118.10|transmembrane protein 132A 	ENST00000005286.4|TMEM132A|ENSG00000006118.10|transmembrane protein 132A
hg19_v2_chr11_+_28724129_28724184	0.170162	SOX9	ENST00000513853.1|RP11-115J23.1|ENSG00000249867.1|RP11-115J23.1
hg19_v2_chr2_+_74212073_74212259	0.169801	SOX9	ENST00000441217.1|AC073046.25|ENSG00000235499.1|AC073046.25
hg19_v2_chr19_+_13906250_13906274	0.169472	SOX9	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr1_+_64239657_64239724	0.168534	SOX9	ENST00000371080.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1 	ENST00000371079.1|ROR1|ENSG00000185483.7|receptor tyrosine kinase-like orphan receptor 1
hg19_v2_chr22_-_42739533_42739622	0.161385	SOX9	ENST00000515426.1|TCF20|ENSG00000100207.14|transcription factor 20 (AR1)
hg19_v2_chr14_+_102276192_102276208	0.159824	SOX9	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr19_+_45504688_45504782	0.159404	SOX9	ENST00000221452.8|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000540120.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B 	ENST00000505236.1|RELB|ENSG00000104856.9|v-rel avian reticuloendotheliosis viral oncogene homolog B
hg19_v2_chr22_-_32022280_32022297	0.159335	SOX9	ENST00000442379.1|PISD|ENSG00000241878.5|phosphatidylserine decarboxylase
hg19_v2_chr1_+_144339738_144339738	0.158918	SOX9	ENST00000538264.1|AL592284.1|ENSG00000231360.2|Protein LOC642441
hg19_v2_chr7_+_26191809_26191890	0.158661	SOX9	ENST00000056233.3|NFE2L3|ENSG00000050344.8|nuclear factor, erythroid 2-like 3
hg19_v2_chr7_+_77167343_77167369	0.157992	SOX9	ENST00000433369.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12 	ENST00000415482.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr5_-_43313574_43313614	0.157893	SOX9	ENST00000325110.6|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) 	ENST00000433297.2|HMGCS1|ENSG00000112972.10|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
hg19_v2_chr11_-_125365435_125365561	0.157196	SOX9	ENST00000524435.1|FEZ1|ENSG00000149557.8|fasciculation and elongation protein zeta 1 (zygin I)
hg19_v2_chr17_+_77751931_77752014	0.157027	SOX9	ENST00000310942.4|CBX2|ENSG00000173894.6|chromobox homolog 2 	ENST00000269399.5|CBX2|ENSG00000173894.6|chromobox homolog 2
hg19_v2_chr12_+_49761147_49761167	0.15686	SOX9	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr12_-_49582593_49582682	0.148278	SOX9	ENST00000295766.5|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr5_-_141338627_141338627	0.148228	SOX9	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr22_+_38054721_38054737	0.148223	SOX9	ENST00000215904.6|PDXP|ENSG00000241360.1|pyridoxal (pyridoxine, vitamin B6) phosphatase
hg19_v2_chr17_+_16945820_16945859	0.147399	SOX9	ENST00000577514.1|MPRIP|ENSG00000133030.15|myosin phosphatase Rho interacting protein
hg19_v2_chr4_+_24661479_24661534	0.143928	SOX9	ENST00000569621.1|RP11-496D24.2|ENSG00000261121.1|RP11-496D24.2
hg19_v2_chr15_-_59041954_59042006	0.143559	SOX9	ENST00000439637.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000558004.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr6_-_75915757_75915775	0.143128	SOX9	ENST00000322507.8|COL12A1|ENSG00000111799.16|collagen, type XII, alpha 1
hg19_v2_chr5_-_16936340_16936418	0.140995	SOX9	ENST00000507288.1|MYO10|ENSG00000145555.10|myosin X 	ENST00000513610.1|MYO10|ENSG00000145555.10|myosin X
hg19_v2_chr1_-_200992827_200992867	0.138063	SOX9	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr6_-_107436473_107436543	0.13473	SOX9	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr20_+_34679725_34679774	0.134268	SOX9	ENST00000432589.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr7_-_131241361_131241398	0.134257	SOX9	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr17_+_46970134_46970170	0.133213	SOX9	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr5_+_172068232_172068320	0.132539	SOX9	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chr7_+_18535321_18535343	0.132033	SOX9	ENST00000413380.1|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000430454.1|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr6_-_27100529_27100582	0.130587	SOX9	ENST00000607124.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000339812.2|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj 	ENST00000541790.1|HIST1H2BJ|ENSG00000124635.7|histone cluster 1, H2bj
hg19_v2_chr3_-_57583052_57583079	0.130345	SOX9	ENST00000496292.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4 	ENST00000489843.1|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr5_-_65018834_65018863	0.129728	SOX9	ENST00000506816.1|SGTB|ENSG00000197860.5|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
hg19_v2_chr1_-_204436344_204436474	0.129523	SOX9	ENST00000367184.2|PIK3C2B|ENSG00000133056.9|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
hg19_v2_chr7_+_28452130_28452154	0.127788	SOX9	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr10_+_6244829_6244904	0.1248	SOX9	ENST00000317350.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379785.1|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379782.3|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000360521.2|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 	ENST00000379775.4|PFKFB3|ENSG00000170525.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
hg19_v2_chr1_+_156119466_156119514	0.124493	SOX9	ENST00000414683.1|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr4_+_175204865_175204915	0.124301	SOX9	ENST00000505124.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
hg19_v2_chr20_-_17662705_17662874	0.123606	SOX9	ENST00000455029.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr8_+_24151620_24151647	0.123576	SOX9	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chrX_+_78003204_78003248	0.123435	SOX9	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr11_-_8190534_8190602	0.122329	SOX9	ENST00000309737.6|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000425599.2|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000539720.1|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000531450.1|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000419822.2|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000335425.7|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone 	ENST00000343202.4|RIC3|ENSG00000166405.10|RIC3 acetylcholine receptor chaperone
hg19_v2_chr12_-_49582837_49582875	0.120571	SOX9	ENST00000547939.1|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a 	ENST00000546918.1|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a 	ENST00000552924.1|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr16_-_838329_838397	0.120492	SOX9	ENST00000563560.1|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1 	ENST00000569601.1|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1 	ENST00000565809.1|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1 	ENST00000565377.1|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1 	ENST00000007264.2|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1 	ENST00000567114.1|RPUSD1|ENSG00000007376.3|RNA pseudouridylate synthase domain containing 1
hg19_v2_chrX_+_107288280_107288317	0.115864	SOX9	ENST00000458383.1|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr11_-_76155700_76155736	0.115266	SOX9	ENST00000572035.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr2_-_206950996_206951032	0.114843	SOX9	ENST00000414320.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr3_+_88108381_88108450	0.113379	SOX9	ENST00000473136.1|RP11-159G9.5|ENSG00000229729.3|Uncharacterized protein
hg19_v2_chr1_-_153643442_153643524	0.113194	SOX9	ENST00000368681.1|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2 	ENST00000361891.4|ILF2|ENSG00000143621.12|interleukin enhancer binding factor 2
hg19_v2_chr15_+_89164560_89164601	0.113024	SOX9	ENST00000379231.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease 	ENST00000559528.1|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr22_-_30722912_30723035	0.112763	SOX9	ENST00000215790.7|TBC1D10A|ENSG00000099992.11|TBC1 domain family, member 10A
hg19_v2_chr7_+_155090271_155090382	0.112489	SOX9	ENST00000476756.1|INSIG1|ENSG00000186480.8|insulin induced gene 1
hg19_v2_chr4_-_40516560_40516605	0.112233	SOX9	ENST00000513473.1|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr6_-_139613269_139613280	0.112122	SOX9	ENST00000358430.3|TXLNB|ENSG00000164440.10|taxilin beta
hg19_v2_chr14_-_71276211_71276255	0.111654	SOX9	ENST00000381250.4|MAP3K9|ENSG00000006432.11|mitogen-activated protein kinase kinase kinase 9 	ENST00000555993.2|MAP3K9|ENSG00000006432.11|mitogen-activated protein kinase kinase kinase 9
hg19_v2_chr5_-_64777685_64777712	0.11163	SOX9	ENST00000536360.1|ADAMTS6|ENSG00000049192.10|ADAM metallopeptidase with thrombospondin type 1 motif, 6
hg19_v2_chr17_-_74722672_74722761	0.111092	SOX9	ENST00000397625.4|JMJD6|ENSG00000070495.10|jumonji domain containing 6 	ENST00000445478.2|JMJD6|ENSG00000070495.10|jumonji domain containing 6
hg19_v2_chr5_-_146435572_146435590	0.11	SOX9	ENST00000394414.1|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr6_+_29691056_29691188	0.10908	SOX9	ENST00000414333.1|HLA-F|ENSG00000204642.9|major histocompatibility complex, class I, F 	ENST00000334668.4|HLA-F|ENSG00000204642.9|major histocompatibility complex, class I, F 	ENST00000259951.7|HLA-F|ENSG00000204642.9|major histocompatibility complex, class I, F
hg19_v2_chr17_+_74723031_74723047	0.108995	SOX9	ENST00000586200.1|METTL23|ENSG00000181038.9|methyltransferase like 23
hg19_v2_chr3_+_111718173_111718195	0.108373	SOX9	ENST00000494932.1|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr8_+_42195972_42195991	0.108327	SOX9	ENST00000532157.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000265421.4|POLB|ENSG00000070501.7|polymerase (DNA directed), beta 	ENST00000520008.1|POLB|ENSG00000070501.7|polymerase (DNA directed), beta
hg19_v2_chr1_-_198906528_198906573	0.107142	SOX9	ENST00000432296.1|MIR181A1HG|ENSG00000229989.3|MIR181A1 host gene (non-protein coding)
hg19_v2_chr6_+_21666633_21666681	0.106332	SOX9	ENST00000606851.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr10_+_71812577_71812644	0.10619	SOX9	ENST00000455786.1|H2AFY2|ENSG00000099284.9|H2A histone family, member Y2
hg19_v2_chr17_-_14683517_14683523	0.105855	SOX9	ENST00000379640.1|AC005863.1|ENSG00000205325.1|AC005863.1
hg19_v2_chr5_-_146833222_146833261	0.105843	SOX9	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr6_+_41040678_41040722	0.105724	SOX9	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr1_+_161195835_161195864	0.105182	SOX9	ENST00000545897.1|TOMM40L|ENSG00000158882.8|translocase of outer mitochondrial membrane 40 homolog (yeast)-like
hg19_v2_chr11_+_126225529_126225660	0.103303	SOX9	ENST00000227495.6|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000444328.2|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4 	ENST00000356132.4|ST3GAL4|ENSG00000110080.14|ST3 beta-galactoside alpha-2,3-sialyltransferase 4
hg19_v2_chr7_+_99699280_99699335	0.101046	SOX9	ENST00000421755.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr8_-_49533521_49533578	0.100587	SOX9	ENST00000523038.1|RP11-567J20.1|ENSG00000253702.1|RP11-567J20.1
hg19_v2_chr12_-_95611149_95611249	0.0990315	SOX9	ENST00000549499.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000343958.4|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6 	ENST00000546711.1|FGD6|ENSG00000180263.9|FYVE, RhoGEF and PH domain containing 6
hg19_v2_chr5_-_146435694_146435705	0.0987201	SOX9	ENST00000356826.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr6_-_108278456_108278544	0.0975175	SOX9	ENST00000429168.1|SEC63|ENSG00000025796.9|SEC63 homolog (S. cerevisiae)
hg19_v2_chr11_+_128563652_128563689	0.0974879	SOX9	ENST00000527786.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr19_+_10765614_10765687	0.0972079	SOX9	ENST00000589283.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr2_+_208576259_208576278	0.0966064	SOX9	ENST00000392209.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr12_+_49761273_49761330	0.096079	SOX9	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr9_-_35111570_35111600	0.0959938	SOX9	ENST00000378561.1|FAM214B|ENSG00000005238.15|family with sequence similarity 214, member B 	ENST00000603301.1|FAM214B|ENSG00000005238.15|family with sequence similarity 214, member B
hg19_v2_chr22_-_22292934_22292967	0.0948217	SOX9	ENST00000538191.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000424647.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000407142.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr8_-_38326139_38326161	0.0945331	SOX9	ENST00000335922.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000532791.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397091.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr12_+_69979210_69979252	0.0944822	SOX9	ENST00000544368.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr11_-_92930556_92930621	0.0941108	SOX9	ENST00000529184.1|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr5_+_69321074_69321200	0.0939462	SOX9	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr8_-_66753682_66753743	0.0934602	SOX9	ENST00000396642.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr6_-_134861089_134861168	0.0932162	SOX9	ENST00000606039.1|RP11-557H15.4|ENSG00000232310.2|RP11-557H15.4
hg19_v2_chr7_-_27205136_27205164	0.0917677	SOX9	ENST00000396345.1|HOXA9|ENSG00000078399.11|homeobox A9 	ENST00000343483.6|HOXA9|ENSG00000078399.11|homeobox A9
hg19_v2_chr7_-_107968999_107969099	0.0911632	SOX9	ENST00000456431.1|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr6_+_22146851_22146883	0.0909732	SOX9	ENST00000606197.1|CASC15|ENSG00000272168.1|cancer susceptibility candidate 15 (non-protein coding)
hg19_v2_chr15_+_57211318_57211355	0.0907003	SOX9	ENST00000557947.1|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr19_-_8408139_8408153	0.0902614	SOX9	ENST00000330915.3|KANK3|ENSG00000186994.7|KN motif and ankyrin repeat domains 3 	ENST00000593649.1|KANK3|ENSG00000186994.7|KN motif and ankyrin repeat domains 3 	ENST00000595639.1|KANK3|ENSG00000186994.7|KN motif and ankyrin repeat domains 3
hg19_v2_chrX_+_9433289_9433334	0.0900724	SOX9	ENST00000422314.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr7_+_77167376_77167395	0.0892539	SOX9	ENST00000435495.2|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr12_+_69979113_69979155	0.08916	SOX9	ENST00000299300.6|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr4_-_184241927_184241927	0.0885709	SOX9	ENST00000323319.5|CLDN22|ENSG00000177300.5|claudin 22
hg19_v2_chr18_+_3450161_3450210	0.0883762	SOX9	ENST00000551402.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000577543.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr7_+_18535346_18535399	0.087662	SOX9	ENST00000405010.3|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000406451.4|HDAC9|ENSG00000048052.17|histone deacetylase 9 	ENST00000428307.2|HDAC9|ENSG00000048052.17|histone deacetylase 9
hg19_v2_chr20_+_48884002_48884088	0.0871668	SOX9	ENST00000425497.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3	ENST00000445003.1|RP11-290F20.3|ENSG00000224397.1|RP11-290F20.3
hg19_v2_chr19_+_10765003_10765058	0.0870798	SOX9	ENST00000407004.3|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589998.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000589600.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr12_+_69979446_69979471	0.0867051	SOX9	ENST00000543146.2|CCT2|ENSG00000166226.8|chaperonin containing TCP1, subunit 2 (beta)
hg19_v2_chr7_+_76751926_76751960	0.0864822	SOX9	ENST00000285871.4|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146 	ENST00000431197.1|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146
hg19_v2_chr17_+_9066252_9066271	0.0863628	SOX9	ENST00000436734.1|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr19_+_10765699_10765728	0.0853114	SOX9	ENST00000590009.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr19_+_54641444_54641504	0.0849847	SOX9	ENST00000221232.5|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3 	ENST00000358389.3|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3
hg19_v2_chr10_+_91461413_91461436	0.0840536	SOX9	ENST00000447580.1|KIF20B|ENSG00000138182.10|kinesin family member 20B
hg19_v2_chr6_+_89790459_89790479	0.0837452	SOX9	ENST00000369472.1|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr9_+_35538616_35538650	0.08372	SOX9	ENST00000455600.1|RUSC2|ENSG00000198853.7|RUN and SH3 domain containing 2
hg19_v2_chr1_-_32801825_32801980	0.0836103	SOX9	ENST00000329421.7|MARCKSL1|ENSG00000175130.6|MARCKS-like 1
hg19_v2_chr11_-_65640071_65640125	0.0830529	SOX9	ENST00000526624.1|EFEMP2|ENSG00000172638.8|EGF containing fibulin-like extracellular matrix protein 2
hg19_v2_chr7_-_150924121_150924332	0.0815914	SOX9	ENST00000441774.1|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2 	ENST00000222388.2|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2 	ENST00000287844.2|ABCF2|ENSG00000033050.3|ATP-binding cassette, sub-family F (GCN20), member 2
hg19_v2_chr14_-_21516590_21516692	0.0814528	SOX9	ENST00000555026.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr1_-_204463829_204463857	0.08057	SOX9	ENST00000429009.1|PIK3C2B|ENSG00000133056.9|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta 	ENST00000415899.1|PIK3C2B|ENSG00000133056.9|phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
hg19_v2_chr1_-_205912577_205912593	0.0803055	SOX9	ENST00000367135.3|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9 	ENST00000367134.2|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr19_-_10491130_10491220	0.0796044	SOX9	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chrX_-_130037162_130037190	0.0790737	SOX9	ENST00000432489.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr15_+_41136369_41136420	0.0787808	SOX9	ENST00000563656.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr19_-_19739321_19739366	0.0786928	SOX9	ENST00000588461.1|LPAR2|ENSG00000064547.9|lysophosphatidic acid receptor 2
hg19_v2_chr5_+_40841410_40841489	0.0785328	SOX9	ENST00000381677.3|CARD6|ENSG00000132357.9|caspase recruitment domain family, member 6
hg19_v2_chr16_-_75590114_75590184	0.078375	SOX9	ENST00000568377.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000565067.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000258173.6|TMEM231|ENSG00000205084.6|transmembrane protein 231
hg19_v2_chr2_-_70475730_70475798	0.0783379	SOX9	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr1_+_228337553_228337602	0.0778642	SOX9	ENST00000366714.2|GJC2|ENSG00000198835.3|gap junction protein, gamma 2, 47kDa
hg19_v2_chr17_+_18128896_18128983	0.0771075	SOX9	ENST00000316843.4|LLGL1|ENSG00000131899.6|lethal giant larvae homolog 1 (Drosophila)
hg19_v2_chr9_-_35828576_35828734	0.0766747	SOX9	ENST00000377984.2|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B 	ENST00000423537.2|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B 	ENST00000472182.1|FAM221B|ENSG00000204930.5|family with sequence similarity 221, member B
hg19_v2_chr3_-_122283424_122283498	0.0756707	SOX9	ENST00000477522.2|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9 	ENST00000360356.2|PARP9|ENSG00000138496.12|poly (ADP-ribose) polymerase family, member 9
hg19_v2_chr2_-_1748214_1748295	0.0751906	SOX9	ENST00000433670.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000425171.1|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila) 	ENST00000252804.4|PXDN|ENSG00000130508.6|peroxidasin homolog (Drosophila)
hg19_v2_chr9_-_35111420_35111455	0.0749897	SOX9	ENST00000378557.1|FAM214B|ENSG00000005238.15|family with sequence similarity 214, member B
hg19_v2_chr15_+_76629064_76629073	0.0740878	SOX9	ENST00000290759.4|ISL2|ENSG00000159556.5|ISL LIM homeobox 2
hg19_v2_chr5_-_146435501_146435537	0.0739232	SOX9	ENST00000336640.6|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr1_+_200993071_200993094	0.0735932	SOX9	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr17_-_37764128_37764258	0.0734278	SOX9	ENST00000302584.4|NEUROD2|ENSG00000171532.4|neuronal differentiation 2
hg19_v2_chr15_+_41136734_41136873	0.0730395	SOX9	ENST00000568580.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr1_-_21503337_21503407	0.0729195	SOX9	ENST00000400422.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000602326.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000411888.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000438975.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr11_+_63953587_63953685	0.0728029	SOX9	ENST00000305218.4|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1 	ENST00000538945.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr22_-_30722866_30722911	0.0719791	SOX9	ENST00000403477.3|TBC1D10A|ENSG00000099992.11|TBC1 domain family, member 10A
hg19_v2_chr15_+_74911430_74911484	0.0718343	SOX9	ENST00000562670.1|CLK3|ENSG00000179335.14|CDC-like kinase 3 	ENST00000564096.1|CLK3|ENSG00000179335.14|CDC-like kinase 3
hg19_v2_chr6_-_128841503_128841870	0.0716949	SOX9	ENST00000368215.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000532331.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368213.5|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368207.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000525459.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368210.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368226.4|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368227.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K
hg19_v2_chr15_+_31619013_31619095	0.0712303	SOX9	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr7_-_5463175_5463195	0.07091	SOX9	ENST00000399537.4|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18 	ENST00000430969.1|TNRC18|ENSG00000182095.10|trinucleotide repeat containing 18
hg19_v2_chr19_+_45394477_45394546	0.0700518	SOX9	ENST00000252487.5|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000405636.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000592434.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000426677.2|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast) 	ENST00000589649.1|TOMM40|ENSG00000130204.8|translocase of outer mitochondrial membrane 40 homolog (yeast)
hg19_v2_chr11_-_76155618_76155676	0.069527	SOX9	ENST00000530759.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr17_+_7761301_7761396	0.0693574	SOX9	ENST00000332439.4|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1 	ENST00000570446.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr3_-_149510553_149510610	0.0693299	SOX9	ENST00000462519.2|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000446160.1|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000383050.3|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1
hg19_v2_chr11_+_63953691_63953713	0.0692706	SOX9	ENST00000543847.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr8_-_38326119_38326134	0.0692197	SOX9	ENST00000356207.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000326324.6|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr19_-_7694417_7694459	0.0683917	SOX9	ENST00000358368.4|XAB2|ENSG00000076924.7|XPA binding protein 2 	ENST00000534844.1|XAB2|ENSG00000076924.7|XPA binding protein 2
hg19_v2_chr7_-_111846435_111846471	0.0680184	SOX9	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr11_-_33183048_33183077	0.0679594	SOX9	ENST00000438862.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chr17_-_76713100_76713122	0.0674898	SOX9	ENST00000585509.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr2_+_74425689_74425749	0.0673041	SOX9	ENST00000394053.2|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409804.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000264090.4|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000394050.3|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 	ENST00000409601.1|MTHFD2|ENSG00000065911.7|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
hg19_v2_chr20_-_17662878_17662940	0.0672004	SOX9	ENST00000377813.1|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000377807.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000360807.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1 	ENST00000398782.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr20_-_45984401_45984514	0.0671958	SOX9	ENST00000311275.7|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr19_+_34887220_34887220	0.0670735	SOX9	ENST00000592740.1|RP11-618P17.4|ENSG00000266953.2|Uncharacterized protein
hg19_v2_chr17_-_74722536_74722639	0.0666806	SOX9	ENST00000585429.1|JMJD6|ENSG00000070495.10|jumonji domain containing 6
hg19_v2_chr22_+_21987005_21987021	0.0659487	SOX9	ENST00000607942.1|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116 	ENST00000425975.1|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116 	ENST00000292779.3|CCDC116|ENSG00000161180.6|coiled-coil domain containing 116
hg19_v2_chr16_-_25026641_25026698	0.0653639	SOX9	ENST00000289968.6|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000303665.5|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000455311.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17 	ENST00000441763.2|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr2_+_54683419_54683442	0.0648795	SOX9	ENST00000356805.4|SPTBN1|ENSG00000115306.11|spectrin, beta, non-erythrocytic 1
hg19_v2_chr5_-_60240858_60240905	0.0645359	SOX9	ENST00000426742.2|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000265038.5|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000543101.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000439176.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8
hg19_v2_chrX_-_19817869_19817922	0.0643339	SOX9	ENST00000379698.4|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr6_+_53976235_53976254	0.064284	SOX9	ENST00000502396.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000358276.5|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr5_-_131826457_131826514	0.064072	SOX9	ENST00000437654.1|IRF1|ENSG00000125347.9|interferon regulatory factor 1 	ENST00000245414.4|IRF1|ENSG00000125347.9|interferon regulatory factor 1
hg19_v2_chr1_-_113247543_113247770	0.0629421	SOX9	ENST00000414971.1|RHOC|ENSG00000155366.12|ras homolog family member C 	ENST00000534717.1|RHOC|ENSG00000155366.12|ras homolog family member C
hg19_v2_chr5_-_157079428_157079452	0.0623156	SOX9	ENST00000265007.6|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr9_-_73483926_73483945	0.0622208	SOX9	ENST00000396283.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000361823.5|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr3_+_14444063_14444133	0.0621581	SOX9	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr1_+_6640046_6640101	0.0621031	SOX9	ENST00000319084.5|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48 	ENST00000435905.1|ZBTB48|ENSG00000204859.7|zinc finger and BTB domain containing 48
hg19_v2_chr11_-_67141090_67141208	0.0620719	SOX9	ENST00000312438.7|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chr3_+_45635661_45635816	0.061988	SOX9	ENST00000440097.1|LIMD1|ENSG00000144791.5|LIM domains containing 1
hg19_v2_chrX_+_68048803_68048892	0.0619415	SOX9	ENST00000204961.4|EFNB1|ENSG00000090776.5|ephrin-B1
hg19_v2_chr3_-_48700310_48700348	0.0613825	SOX9	ENST00000164024.4|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3 	ENST00000544264.1|CELSR3|ENSG00000008300.10|cadherin, EGF LAG seven-pass G-type receptor 3
hg19_v2_chr17_-_4871085_4871167	0.0612466	SOX9	ENST00000575142.1|SPAG7|ENSG00000091640.3|sperm associated antigen 7 	ENST00000206020.3|SPAG7|ENSG00000091640.3|sperm associated antigen 7
hg19_v2_chr19_+_58790314_58790358	0.0607172	SOX9	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr1_-_243418344_243418356	0.060695	SOX9	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr8_+_61822605_61822618	0.0606439	SOX9	ENST00000526936.1|AC022182.1|ENSG00000254777.1|AC022182.1
hg19_v2_chr7_-_112635675_112635720	0.0603217	SOX9	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chrX_-_2418596_2418621	0.060281	SOX9	ENST00000381218.3|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1
hg19_v2_chr14_-_103989033_103989176	0.0602348	SOX9	ENST00000553878.1|CKB|ENSG00000166165.8|creatine kinase, brain 	ENST00000557530.1|CKB|ENSG00000166165.8|creatine kinase, brain
hg19_v2_chr7_+_99699179_99699214	0.0600868	SOX9	ENST00000438383.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000429084.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000359593.4|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000439416.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr19_-_1568057_1568142	0.0600575	SOX9	ENST00000402693.4|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D 	ENST00000388824.6|MEX3D|ENSG00000181588.15|mex-3 RNA binding family member D
hg19_v2_chr5_-_39425068_39425098	0.0599273	SOX9	ENST00000515700.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 	ENST00000339788.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr16_+_75032901_75032974	0.0599053	SOX9	ENST00000335325.4|ZNRF1|ENSG00000186187.7|zinc and ring finger 1, E3 ubiquitin protein ligase 	ENST00000320619.6|ZNRF1|ENSG00000186187.7|zinc and ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr6_-_30654977_30655009	0.0595501	SOX9	ENST00000399199.3|PPP1R18|ENSG00000146112.7|protein phosphatase 1, regulatory subunit 18
hg19_v2_chr3_-_50365607_50365676	0.0593999	SOX9	ENST00000232496.4|TUSC2|ENSG00000114383.5|tumor suppressor candidate 2
hg19_v2_chr5_-_147162078_147162106	0.0592405	SOX9	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr1_+_161195781_161195795	0.0590667	SOX9	ENST00000367988.3|TOMM40L|ENSG00000158882.8|translocase of outer mitochondrial membrane 40 homolog (yeast)-like
hg19_v2_chr16_+_838614_838633	0.0590183	SOX9	ENST00000262315.9|CHTF18|ENSG00000127586.12|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae) 	ENST00000455171.2|CHTF18|ENSG00000127586.12|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
hg19_v2_chr11_-_67141640_67141651	0.0589346	SOX9	ENST00000533438.1|CLCF1|ENSG00000175505.9|cardiotrophin-like cytokine factor 1
hg19_v2_chr11_-_117103208_117103288	0.0588294	SOX9	ENST00000320934.3|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7 	ENST00000530269.1|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7
hg19_v2_chr9_-_139965000_139965040	0.0588177	SOX9	ENST00000409687.3|SAPCD2|ENSG00000186193.7|suppressor APC domain containing 2
hg19_v2_chr19_-_44123734_44123796	0.0583445	SOX9	ENST00000598676.1|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr9_+_112852477_112852514	0.0583355	SOX9	ENST00000480388.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr11_+_128563948_128564003	0.0580699	SOX9	ENST00000534087.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr6_-_127840048_127840074	0.057422	SOX9	ENST00000467753.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr19_+_10764937_10764998	0.0567638	SOX9	ENST00000449870.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000318511.3|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa 	ENST00000420083.1|ILF3|ENSG00000129351.13|interleukin enhancer binding factor 3, 90kDa
hg19_v2_chr8_-_82395461_82395498	0.0566948	SOX9	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr2_-_107503558_107503580	0.0566851	SOX9	ENST00000361686.4|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 	ENST00000409087.3|ST6GAL2|ENSG00000144057.11|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2
hg19_v2_chr5_+_148521454_148521610	0.0565188	SOX9	ENST00000508983.1|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr6_-_35464727_35464738	0.0562876	SOX9	ENST00000402886.3|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr22_+_38864041_38864150	0.0561355	SOX9	ENST00000216014.4|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 	ENST00000409006.3|KDELR3|ENSG00000100196.6|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
hg19_v2_chr17_-_39942322_39942461	0.056058	SOX9	ENST00000449889.1|JUP|ENSG00000173801.12|junction plakoglobin 	ENST00000465293.1|JUP|ENSG00000173801.12|junction plakoglobin
hg19_v2_chr8_-_38325219_38325418	0.0559482	SOX9	ENST00000533668.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000413133.2|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397108.4|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000526742.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000525001.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000425967.3|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000529552.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397113.2|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr17_-_42276574_42276742	0.0557041	SOX9	ENST00000589805.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr1_-_31381528_31381659	0.0555482	SOX9	ENST00000339394.6|SDC3|ENSG00000162512.11|syndecan 3
hg19_v2_chr10_+_104678032_104678094	0.0553748	SOX9	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr5_-_168006591_168006638	0.0549673	SOX9	ENST00000239231.6|PANK3|ENSG00000120137.6|pantothenate kinase 3
hg19_v2_chr9_+_103235365_103235419	0.0540257	SOX9	ENST00000374879.4|TMEFF1|ENSG00000241697.3|transmembrane protein with EGF-like and two follistatin-like domains 1
hg19_v2_chr19_+_16187816_16187838	0.0539953	SOX9	ENST00000588410.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr10_+_70748487_70748498	0.0539378	SOX9	ENST00000361983.4|KIAA1279|ENSG00000198954.4|KIAA1279
hg19_v2_chr19_-_1592652_1592762	0.0538895	SOX9	ENST00000156825.1|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3 	ENST00000434436.3|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3
hg19_v2_chr22_+_35796056_35796090	0.0537166	SOX9	ENST00000216122.4|MCM5|ENSG00000100297.11|minichromosome maintenance complex component 5
hg19_v2_chr4_-_76598326_76598346	0.0536659	SOX9	ENST00000503660.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr6_+_32132360_32132437	0.0534816	SOX9	ENST00000333845.6|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000395512.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8 	ENST00000432129.1|EGFL8|ENSG00000241404.2|EGF-like-domain, multiple 8
hg19_v2_chr5_+_110073853_110073866	0.0532007	SOX9	ENST00000513807.1|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46 	ENST00000509442.2|SLC25A46|ENSG00000164209.12|solute carrier family 25, member 46
hg19_v2_chr3_-_135913298_135913396	0.0531594	SOX9	ENST00000434835.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr20_-_30795511_30795594	0.0529473	SOX9	ENST00000246229.4|PLAGL2|ENSG00000126003.6|pleiomorphic adenoma gene-like 2
hg19_v2_chr1_-_243418650_243418664	0.0525942	SOX9	ENST00000522995.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr1_+_66458072_66458109	0.0521704	SOX9	ENST00000423207.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr11_+_68080077_68080127	0.0505651	SOX9	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr17_-_39728303_39728318	0.0504925	SOX9	ENST00000588431.1|KRT9|ENSG00000171403.5|keratin 9 	ENST00000246662.4|KRT9|ENSG00000171403.5|keratin 9
hg19_v2_chr15_+_89164520_89164559	0.0504411	SOX9	ENST00000332810.3|AEN|ENSG00000181026.13|apoptosis enhancing nuclease
hg19_v2_chr1_-_85930246_85930289	0.0500782	SOX9	ENST00000426972.3|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr16_-_1661988_1662111	0.0500605	SOX9	ENST00000426508.2|IFT140|ENSG00000187535.9|intraflagellar transport 140 homolog (Chlamydomonas)
hg19_v2_chr12_+_69633372_69633396	0.0500543	SOX9	ENST00000456847.3|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa 	ENST00000266679.8|CPSF6|ENSG00000111605.12|cleavage and polyadenylation specific factor 6, 68kDa
hg19_v2_chr1_-_205904950_205905037	0.0499572	SOX9	ENST00000340781.4|SLC26A9|ENSG00000174502.14|solute carrier family 26 (anion exchanger), member 9
hg19_v2_chr20_-_45985172_45985240	0.0499252	SOX9	ENST00000536340.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr11_-_44971702_44971759	0.0498016	SOX9	ENST00000533940.1|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11 	ENST00000533937.1|TP53I11|ENSG00000175274.14|tumor protein p53 inducible protein 11
hg19_v2_chr16_+_3068393_3068446	0.0495435	SOX9	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr19_+_7895074_7895119	0.0493375	SOX9	ENST00000270530.4|EVI5L|ENSG00000142459.4|ecotropic viral integration site 5-like
hg19_v2_chr19_+_58694742_58694863	0.0492923	SOX9	ENST00000597528.1|ZNF274|ENSG00000171606.13|zinc finger protein 274 	ENST00000594839.1|ZNF274|ENSG00000171606.13|zinc finger protein 274
hg19_v2_chr18_+_55102917_55102985	0.0492188	SOX9	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr1_+_165797024_165797069	0.0488409	SOX9	ENST00000372212.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr19_+_55851221_55851285	0.0488296	SOX9	ENST00000255613.3|SUV420H2|ENSG00000133247.9|suppressor of variegation 4-20 homolog 2 (Drosophila) 	ENST00000539076.1|AC020922.1|ENSG00000267531.1|Uncharacterized protein
hg19_v2_chr4_-_2264015_2264041	0.0487248	SOX9	ENST00000337190.2|MXD4|ENSG00000123933.10|MAX dimerization protein 4
hg19_v2_chr5_-_39425290_39425336	0.0487	SOX9	ENST00000545653.1|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr12_-_12674032_12674059	0.0485575	SOX9	ENST00000298573.4|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr4_-_149363376_149363492	0.0482726	SOX9	ENST00000512865.1|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr12_+_53845879_53846152	0.0482708	SOX9	ENST00000359282.5|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000603815.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000447282.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000437231.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000549863.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000359462.5|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000550520.2|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000546463.1|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2 	ENST00000552296.2|PCBP2|ENSG00000197111.11|poly(rC) binding protein 2
hg19_v2_chr13_+_98795434_98795480	0.0480398	SOX9	ENST00000376586.2|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr8_+_11660227_11660306	0.0478967	SOX9	ENST00000443614.2|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525900.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr16_+_82660635_82660698	0.0478055	SOX9	ENST00000567445.1|CDH13|ENSG00000140945.11|cadherin 13 	ENST00000446376.2|CDH13|ENSG00000140945.11|cadherin 13
hg19_v2_chr1_-_1243392_1243403	0.0475482	SOX9	ENST00000354700.5|ACAP3|ENSG00000131584.14|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v2_chr1_+_155294342_155294368	0.0474025	SOX9	ENST00000292254.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr12_+_49761224_49761259	0.0473351	SOX9	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chrX_-_15683147_15683159	0.0472097	SOX9	ENST00000380342.3|TMEM27|ENSG00000147003.5|transmembrane protein 27
hg19_v2_chr2_-_70475701_70475717	0.0470443	SOX9	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr5_-_175964366_175964429	0.0470178	SOX9	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr4_-_109090106_109090124	0.0466971	SOX9	ENST00000379951.2|LEF1|ENSG00000138795.5|lymphoid enhancer-binding factor 1
hg19_v2_chr15_+_41136216_41136252	0.0463506	SOX9	ENST00000562057.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1 	ENST00000344051.4|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr11_-_8892464_8892677	0.0463228	SOX9	ENST00000527347.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526241.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526126.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000530938.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000526057.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr3_+_113616317_113616364	0.0463209	SOX9	ENST00000440446.2|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C 	ENST00000488680.1|GRAMD1C|ENSG00000178075.15|GRAM domain containing 1C
hg19_v2_chr2_-_151344172_151344243	0.0463206	SOX9	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr16_+_50775948_50775961	0.046078	SOX9	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr12_-_11036844_11036861	0.0460488	SOX9	ENST00000428168.2|PRH1|ENSG00000231887.2|proline-rich protein HaeIII subfamily 1
hg19_v2_chr1_+_26503894_26504025	0.045818	SOX9	ENST00000361530.6|CNKSR1|ENSG00000142675.13|connector enhancer of kinase suppressor of Ras 1 	ENST00000374253.5|CNKSR1|ENSG00000142675.13|connector enhancer of kinase suppressor of Ras 1
hg19_v2_chr1_-_243418621_243418648	0.0457036	SOX9	ENST00000366544.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000366543.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr20_-_35492048_35492118	0.045664	SOX9	ENST00000237536.4|SOGA1|ENSG00000149639.10|suppressor of glucose, autophagy associated 1
hg19_v2_chr3_+_51422478_51422478	0.045534	SOX9	ENST00000528157.1|MANF|ENSG00000145050.11|mesencephalic astrocyte-derived neurotrophic factor
hg19_v2_chr5_-_147162263_147162338	0.04526	SOX9	ENST00000333010.6|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2 	ENST00000265272.5|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr1_+_155294264_155294332	0.0450363	SOX9	ENST00000368349.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chrX_-_53711064_53711132	0.045014	SOX9	ENST00000342160.3|HUWE1|ENSG00000086758.11|HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 	ENST00000446750.1|HUWE1|ENSG00000086758.11|HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr19_-_59031118_59031193	0.0446318	SOX9	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr4_-_149363662_149363688	0.0444393	SOX9	ENST00000355292.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2 	ENST00000358102.3|NR3C2|ENSG00000151623.10|nuclear receptor subfamily 3, group C, member 2
hg19_v2_chr16_-_89556942_89557020	0.0443783	SOX9	ENST00000301030.4|ANKRD11|ENSG00000167522.10|ankyrin repeat domain 11
hg19_v2_chr11_+_34654011_34654118	0.0443279	SOX9	ENST00000531794.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chrX_+_85403445_85403479	0.0443248	SOX9	ENST00000373131.1|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr6_+_53976285_53976308	0.0442874	SOX9	ENST00000514433.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr7_+_44788430_44788530	0.0440983	SOX9	ENST00000457123.1|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2 	ENST00000309315.4|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2
hg19_v2_chr20_+_3827459_3827534	0.0436789	SOX9	ENST00000416600.2|MAVS|ENSG00000088888.13|mitochondrial antiviral signaling protein 	ENST00000428216.2|MAVS|ENSG00000088888.13|mitochondrial antiviral signaling protein
hg19_v2_chr17_-_7761256_7761397	0.043588	SOX9	ENST00000575208.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr4_-_175204765_175204843	0.0435052	SOX9	ENST00000513696.1|FBXO8|ENSG00000164117.8|F-box protein 8 	ENST00000503293.1|FBXO8|ENSG00000164117.8|F-box protein 8
hg19_v2_chr3_+_111718036_111718047	0.0435012	SOX9	ENST00000455401.2|TAGLN3|ENSG00000144834.8|transgelin 3
hg19_v2_chr17_+_30813576_30813637	0.0431529	SOX9	ENST00000313401.3|CDK5R1|ENSG00000176749.4|cyclin-dependent kinase 5, regulatory subunit 1 (p35)
hg19_v2_chrX_-_74145273_74145319	0.0431119	SOX9	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr9_-_35072585_35072632	0.0430598	SOX9	ENST00000448530.1|VCP|ENSG00000165280.11|valosin containing protein
hg19_v2_chrX_-_130037198_130037234	0.0430278	SOX9	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr19_+_36359341_36359352	0.0429289	SOX9	ENST00000221891.4|APLP1|ENSG00000105290.7|amyloid beta (A4) precursor-like protein 1
hg19_v2_chr6_-_127840336_127840452	0.0427247	SOX9	ENST00000525778.1|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr10_+_24528108_24528128	0.0425339	SOX9	ENST00000438429.1|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr1_+_155579979_155580032	0.0424641	SOX9	ENST00000452804.2|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000538143.1|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000245564.2|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator 	ENST00000368341.4|MSTO1|ENSG00000125459.10|misato 1, mitochondrial distribution and morphology regulator
hg19_v2_chr8_-_101965559_101965570	0.0423276	SOX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chrX_-_24690771_24690794	0.0422952	SOX9	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr9_+_27109133_27109187	0.0420641	SOX9	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr12_-_52887034_52887049	0.0420587	SOX9	ENST00000330722.6|KRT6A|ENSG00000205420.6|keratin 6A
hg19_v2_chr13_+_98795505_98795522	0.0420024	SOX9	ENST00000319562.6|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr11_-_10830463_10830494	0.0417993	SOX9	ENST00000527419.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530211.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000530702.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000524932.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2 	ENST00000532570.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr10_-_11653753_11653806	0.0417361	SOX9	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr2_-_55277436_55277464	0.0417259	SOX9	ENST00000354474.6|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr16_+_50775971_50776014	0.0417009	SOX9	ENST00000311559.9|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000564326.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000566206.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr10_-_32667660_32667735	0.041587	SOX9	ENST00000375110.2|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chrX_+_70503037_70503095	0.0415016	SOX9	ENST00000535149.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr4_-_5894777_5894799	0.0413749	SOX9	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr3_-_65583561_65583610	0.0410401	SOX9	ENST00000460329.2|MAGI1|ENSG00000151276.19|membrane associated guanylate kinase, WW and PDZ domain containing 1
hg19_v2_chr16_+_2083265_2083303	0.0408856	SOX9	ENST00000565855.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000566198.1|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr16_+_3019309_3019356	0.0405663	SOX9	ENST00000576565.1|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr7_+_139528952_139529038	0.0403589	SOX9	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr11_+_126139005_126139104	0.0401696	SOX9	ENST00000263578.5|FOXRED1|ENSG00000110074.6|FAD-dependent oxidoreductase domain containing 1 	ENST00000442061.2|FOXRED1|ENSG00000110074.6|FAD-dependent oxidoreductase domain containing 1 	ENST00000532125.1|FOXRED1|ENSG00000110074.6|FAD-dependent oxidoreductase domain containing 1
hg19_v2_chr1_+_26437631_26437665	0.040063	SOX9	ENST00000444713.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr1_+_26737253_26737269	0.0398122	SOX9	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr6_+_56911336_56911347	0.0396982	SOX9	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chrX_+_46306714_46306741	0.0394476	SOX9	ENST00000298190.6|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000377919.2|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000476762.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4 	ENST00000478600.1|KRBOX4|ENSG00000147121.11|KRAB box domain containing 4
hg19_v2_chr16_+_14802801_14802801	0.0390769	SOX9	ENST00000526520.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3 	ENST00000531598.2|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr12_+_93096759_93096804	0.0390311	SOX9	ENST00000544406.2|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr6_-_127840021_127840047	0.0389349	SOX9	ENST00000465909.2|SOGA3|ENSG00000214338.6|SOGA family member 3
hg19_v2_chr3_-_52486841_52486882	0.0388632	SOX9	ENST00000496590.1|TNNC1|ENSG00000114854.3|troponin C type 1 (slow)
hg19_v2_chr13_+_32634993_32635015	0.0387656	SOX9	ENST00000436046.1|FRY|ENSG00000073910.15|furry homolog (Drosophila)
hg19_v2_chr10_+_102759045_102759233	0.0383802	SOX9	ENST00000370220.1|LZTS2|ENSG00000107816.13|leucine zipper, putative tumor suppressor 2
hg19_v2_chr4_-_83351005_83351019	0.0382272	SOX9	ENST00000295470.5|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr9_+_27109392_27109435	0.0382083	SOX9	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr11_-_46848393_46848439	0.038182	SOX9	ENST00000526496.1|CKAP5|ENSG00000175216.10|cytoskeleton associated protein 5
hg19_v2_chr14_+_102276132_102276178	0.038176	SOX9	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr19_+_36208877_36208921	0.0380953	SOX9	ENST00000420124.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000222270.7|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B  	ENST00000341701.1|KMT2B|ENSG00000272333.1|Histone-lysine N-methyltransferase 2B
hg19_v2_chr9_+_139221880_139221932	0.0378411	SOX9	ENST00000392945.3|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1 	ENST00000440944.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chr12_+_110011571_110011644	0.0378224	SOX9	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr22_+_38035623_38035712	0.037743	SOX9	ENST00000336738.5|SH3BP1|ENSG00000100092.16|SH3-domain binding protein 1 	ENST00000442465.2|SH3BP1|ENSG00000100092.16|SH3-domain binding protein 1
hg19_v2_chr11_+_118955583_118955640	0.0373673	SOX9	ENST00000278715.3|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000536813.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000537841.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000542729.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000546302.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000442944.2|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000544387.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000543090.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase
hg19_v2_chr14_+_100070869_100070893	0.0371864	SOX9	ENST00000502101.2|RP11-543C4.1|ENSG00000247970.2|RP11-543C4.1
hg19_v2_chr19_+_8455200_8455301	0.0369742	SOX9	ENST00000601897.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family 	ENST00000594216.1|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr19_+_44100632_44100683	0.0368927	SOX9	ENST00000533118.1|ZNF576|ENSG00000124444.11|zinc finger protein 576
hg19_v2_chr1_+_25071848_25071944	0.036892	SOX9	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr7_+_44788146_44788181	0.0368726	SOX9	ENST00000413916.1|ZMIZ2|ENSG00000122515.10|zinc finger, MIZ-type containing 2
hg19_v2_chr20_+_30555805_30555984	0.0367978	SOX9	ENST00000562532.2|XKR7|ENSG00000260903.2|XK, Kell blood group complex subunit-related family, member 7
hg19_v2_chr18_-_34408802_34408807	0.0367525	SOX9	ENST00000590842.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr16_+_27078219_27078229	0.0363619	SOX9	ENST00000418886.1|C16orf82|ENSG00000234186.2|chromosome 16 open reading frame 82
hg19_v2_chr7_+_16793160_16793160	0.0362343	SOX9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chr17_+_54230819_54230871	0.0362237	SOX9	ENST00000318698.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1 	ENST00000566473.2|ANKFN1|ENSG00000153930.6|ankyrin-repeat and fibronectin type III domain containing 1
hg19_v2_chr11_+_36317830_36317850	0.0358207	SOX9	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr7_-_99699538_99699563	0.0357017	SOX9	ENST00000343023.6|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7 	ENST00000303887.5|MCM7|ENSG00000166508.13|minichromosome maintenance complex component 7
hg19_v2_chr21_+_30671690_30671762	0.0356235	SOX9	ENST00000399921.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr6_+_56911476_56911524	0.0355346	SOX9	ENST00000545356.1|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr17_-_7760779_7760896	0.0354415	SOX9	ENST00000335155.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575071.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr11_-_6677018_6677085	0.0349359	SOX9	ENST00000299441.3|DCHS1|ENSG00000166341.6|dachsous cadherin-related 1
hg19_v2_chrX_-_73512411_73512444	0.0347823	SOX9	ENST00000602576.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000429124.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr12_+_78224667_78224685	0.034722	SOX9	ENST00000549464.1|NAV3|ENSG00000067798.9|neuron navigator 3
hg19_v2_chr6_-_35464817_35464894	0.0344253	SOX9	ENST00000338863.7|TEAD3|ENSG00000007866.14|TEA domain family member 3
hg19_v2_chr2_+_160568978_160569064	0.034228	SOX9	ENST00000409175.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000539065.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000259050.4|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 	ENST00000421037.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr15_-_34502197_34502212	0.0342155	SOX9	ENST00000557877.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr1_-_117210290_117210376	0.0341633	SOX9	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr2_-_55277512_55277533	0.0340745	SOX9	ENST00000402434.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr20_+_60697480_60697583	0.0339044	SOX9	ENST00000370915.1|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000253001.4|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000400318.2|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279068.6|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae) 	ENST00000279069.7|LSM14B|ENSG00000149657.15|LSM14B, SCD6 homolog B (S. cerevisiae)
hg19_v2_chr3_-_71777824_71777871	0.0335551	SOX9	ENST00000469524.1|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr5_+_86563636_86563712	0.0335346	SOX9	ENST00000274376.6|RASA1|ENSG00000145715.10|RAS p21 protein activator (GTPase activating protein) 1
hg19_v2_chr12_-_81763184_81763202	0.0333037	SOX9	ENST00000548670.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000541570.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000553058.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr9_+_116263778_116263793	0.0332538	SOX9	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr17_-_7297833_7297889	0.0330204	SOX9	ENST00000571802.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000576201.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000573213.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000324822.11|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr9_+_71394945_71394988	0.0328802	SOX9	ENST00000394264.3|FAM122A|ENSG00000187866.6|family with sequence similarity 122A
hg19_v2_chr17_-_73149921_73149971	0.0328474	SOX9	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr12_+_113495492_113495503	0.032368	SOX9	ENST00000257600.3|DTX1|ENSG00000135144.3|deltex homolog 1 (Drosophila)
hg19_v2_chr17_-_7761172_7761209	0.0322608	SOX9	ENST00000333775.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575771.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr6_+_89790490_89790506	0.0319201	SOX9	ENST00000336032.3|PNRC1|ENSG00000146278.10|proline-rich nuclear receptor coactivator 1
hg19_v2_chr6_+_26183958_26184005	0.0318169	SOX9	ENST00000356530.3|HIST1H2BE|ENSG00000197697.3|histone cluster 1, H2be
hg19_v2_chrX_+_41192595_41192651	0.0313447	SOX9	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr1_-_217311090_217311097	0.0312855	SOX9	ENST00000493603.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000366940.2|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr15_+_91416092_91416120	0.0310238	SOX9	ENST00000559353.1|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr17_-_39684550_39684567	0.0309993	SOX9	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr17_-_1531635_1531725	0.0309438	SOX9	ENST00000571650.1|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr22_-_38480100_38480159	0.0309127	SOX9	ENST00000427592.1|SLC16A8|ENSG00000100156.6|solute carrier family 16 (monocarboxylate transporter), member 8
hg19_v2_chr8_+_11660120_11660221	0.0308559	SOX9	ENST00000220584.4|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr7_-_27219632_27219660	0.030548	SOX9	ENST00000470747.4|RP1-170O19.20|ENSG00000257184.2|Uncharacterized protein
hg19_v2_chr2_-_50201327_50201341	0.0304492	SOX9	ENST00000412315.1|NRXN1|ENSG00000179915.16|neurexin 1
hg19_v2_chr4_-_109089573_109089585	0.0304239	SOX9	ENST00000265165.1|LEF1|ENSG00000138795.5|lymphoid enhancer-binding factor 1
hg19_v2_chr5_+_140248518_140248689	0.0303283	SOX9	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr2_+_102314161_102314206	0.0302678	SOX9	ENST00000425019.1|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr1_+_155293702_155293729	0.0302573	SOX9	ENST00000368347.4|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr5_-_39425222_39425283	0.0302556	SOX9	ENST00000320816.6|DAB2|ENSG00000153071.10|Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
hg19_v2_chr12_-_49463620_49463675	0.0300883	SOX9	ENST00000550675.1|RHEBL1|ENSG00000167550.6|Ras homolog enriched in brain like 1
hg19_v2_chr2_+_220492116_220492137	0.0300639	SOX9	ENST00000373760.2|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr3_+_9773409_9773479	0.0300162	SOX9	ENST00000433861.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000424362.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000383829.2|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000302054.3|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1 	ENST00000420291.1|BRPF1|ENSG00000156983.11|bromodomain and PHD finger containing, 1
hg19_v2_chr14_+_75230011_75230120	0.0298215	SOX9	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr19_-_44100275_44100302	0.0296813	SOX9	ENST00000422989.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q 	ENST00000598324.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q
hg19_v2_chr3_+_189507432_189507459	0.0295373	SOX9	ENST00000354600.5|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr16_-_67514982_67515140	0.029429	SOX9	ENST00000565835.1|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 	ENST00000540149.1|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 	ENST00000290949.3|ATP6V0D1|ENSG00000159720.7|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1
hg19_v2_chr15_-_34659349_34659479	0.0293576	SOX9	ENST00000314891.6|LPCAT4|ENSG00000176454.9|lysophosphatidylcholine acyltransferase 4
hg19_v2_chr18_-_34408693_34408780	0.0290323	SOX9	ENST00000587382.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000589049.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000587129.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr1_-_19426149_19426221	0.0289833	SOX9	ENST00000429347.2|UBR4|ENSG00000127481.10|ubiquitin protein ligase E3 component n-recognin 4
hg19_v2_chr10_-_120101752_120101791	0.0285407	SOX9	ENST00000369170.4|FAM204A|ENSG00000165669.9|family with sequence similarity 204, member A
hg19_v2_chrX_-_45060135_45060149	0.0285163	SOX9	ENST00000398000.2|CXorf36|ENSG00000147113.12|chromosome X open reading frame 36 	ENST00000377934.4|CXorf36|ENSG00000147113.12|chromosome X open reading frame 36
hg19_v2_chr7_+_129710350_129710434	0.0284409	SOX9	ENST00000335420.5|KLHDC10|ENSG00000128607.9|kelch domain containing 10 	ENST00000463413.1|KLHDC10|ENSG00000128607.9|kelch domain containing 10
hg19_v2_chr5_+_40841276_40841312	0.0284121	SOX9	ENST00000254691.5|CARD6|ENSG00000132357.9|caspase recruitment domain family, member 6
hg19_v2_chr1_-_176176629_176176659	0.0284088	SOX9	ENST00000367669.3|RFWD2|ENSG00000143207.15|ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
hg19_v2_chr1_+_16085244_16085255	0.0283835	SOX9	ENST00000400773.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chr7_-_148725733_148725759	0.0283796	SOX9	ENST00000286091.4|PDIA4|ENSG00000155660.6|protein disulfide isomerase family A, member 4
hg19_v2_chr5_+_40679584_40679600	0.0283142	SOX9	ENST00000302472.3|PTGER4|ENSG00000171522.5|prostaglandin E receptor 4 (subtype EP4)
hg19_v2_chr14_-_103434869_103435038	0.0282956	SOX9	ENST00000559043.1|CDC42BPB|ENSG00000198752.5|CDC42 binding protein kinase beta (DMPK-like)
hg19_v2_chr1_-_184723942_184724047	0.0279389	SOX9	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr18_+_3449821_3450034	0.0278067	SOX9	ENST00000407501.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000405385.3|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1 	ENST00000546979.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr3_+_189507523_189507590	0.0277575	SOX9	ENST00000437221.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392463.2|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000392461.3|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000449992.1|TP63|ENSG00000073282.8|tumor protein p63 	ENST00000456148.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr5_-_158526756_158526797	0.0277371	SOX9	ENST00000313708.6|EBF1|ENSG00000164330.12|early B-cell factor 1 	ENST00000517373.1|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr17_-_16472483_16472533	0.0269972	SOX9	ENST00000395824.1|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000448349.2|ZNF287|ENSG00000141040.10|zinc finger protein 287 	ENST00000395825.3|ZNF287|ENSG00000141040.10|zinc finger protein 287
hg19_v2_chr4_+_78078304_78078406	0.0267838	SOX9	ENST00000316355.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000354403.5|CCNG2|ENSG00000138764.9|cyclin G2 	ENST00000502280.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr12_+_95611536_95611543	0.0267665	SOX9	ENST00000549002.1|VEZT|ENSG00000028203.13|vezatin, adherens junctions transmembrane protein
hg19_v2_chr3_-_88108212_88108223	0.0265591	SOX9	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr14_-_91884115_91884127	0.0263144	SOX9	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr19_-_15490568_15490606	0.0262213	SOX9	ENST00000269701.2|AKAP8|ENSG00000105127.4|A kinase (PRKA) anchor protein 8
hg19_v2_chr19_+_48972459_48972490	0.026216	SOX9	ENST00000427476.1|CYTH2|ENSG00000105443.9|cytohesin 2
hg19_v2_chr22_+_35796108_35796172	0.0259892	SOX9	ENST00000382011.5|MCM5|ENSG00000100297.11|minichromosome maintenance complex component 5 	ENST00000416905.1|MCM5|ENSG00000100297.11|minichromosome maintenance complex component 5
hg19_v2_chr18_-_44497308_44497499	0.0257761	SOX9	ENST00000585916.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000324794.7|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2 	ENST00000545673.1|PIAS2|ENSG00000078043.11|protein inhibitor of activated STAT, 2
hg19_v2_chr2_+_220492287_220492338	0.0252983	SOX9	ENST00000273063.6|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3 	ENST00000373762.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr14_+_67291158_67291192	0.0252242	SOX9	ENST00000555456.1|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr3_+_111260856_111260948	0.0252155	SOX9	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr15_-_64673630_64673648	0.0251963	SOX9	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr12_-_18243119_18243133	0.0251952	SOX9	ENST00000538724.1|RERGL|ENSG00000111404.2|RERG/RAS-like 	ENST00000229002.2|RERGL|ENSG00000111404.2|RERG/RAS-like
hg19_v2_chr7_-_92855762_92855837	0.0251562	SOX9	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr3_-_193272874_193272911	0.0250242	SOX9	ENST00000342695.4|ATP13A4|ENSG00000127249.10|ATPase type 13A4
hg19_v2_chr1_+_156119798_156119834	0.024757	SOX9	ENST00000355014.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr19_+_44100544_44100581	0.0245599	SOX9	ENST00000391965.2|ZNF576|ENSG00000124444.11|zinc finger protein 576 	ENST00000525771.1|ZNF576|ENSG00000124444.11|zinc finger protein 576
hg19_v2_chrX_-_20159934_20159976	0.0245051	SOX9	ENST00000379593.1|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked 	ENST00000379607.5|EIF1AX|ENSG00000173674.6|eukaryotic translation initiation factor 1A, X-linked
hg19_v2_chr8_+_30496078_30496130	0.0244585	SOX9	ENST00000517349.1|SMIM18|ENSG00000253457.1|small integral membrane protein 18
hg19_v2_chr19_+_7694623_7694710	0.0242943	SOX9	ENST00000594797.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000456958.3|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae) 	ENST00000601406.1|PET100|ENSG00000229833.5|PET100 homolog (S. cerevisiae)
hg19_v2_chr2_-_54197915_54197977	0.0240579	SOX9	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr1_-_119530428_119530572	0.023986	SOX9	ENST00000369429.3|TBX15|ENSG00000092607.9|T-box 15
hg19_v2_chr18_+_6729698_6729724	0.0237833	SOX9	ENST00000383472.4|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr8_-_101965146_101965236	0.0236818	SOX9	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr13_+_24553933_24553949	0.0236529	SOX9	ENST00000424834.2|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000439928.2|RP11-309I15.1|ENSG00000228741.2|RP11-309I15.1
hg19_v2_chr8_-_93115445_93115462	0.0235486	SOX9	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr11_-_111649015_111649030	0.0230236	SOX9	ENST00000529841.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr16_+_50776021_50776045	0.0228937	SOX9	ENST00000566679.2|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000564634.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000398568.2|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chrX_+_48380205_48380257	0.0228059	SOX9	ENST00000446158.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase) 	ENST00000414061.1|EBP|ENSG00000147155.6|emopamil binding protein (sterol isomerase)
hg19_v2_chr19_+_42580274_42580375	0.0224994	SOX9	ENST00000359044.4|ZNF574|ENSG00000105732.9|zinc finger protein 574
hg19_v2_chr3_+_9439400_9439414	0.0222897	SOX9	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr8_-_20161466_20161481	0.0221499	SOX9	ENST00000381569.1|LZTS1|ENSG00000061337.11|leucine zipper, putative tumor suppressor 1
hg19_v2_chr1_+_26737292_26737322	0.0221058	SOX9	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr2_+_208576355_208576475	0.0218557	SOX9	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr2_+_10262857_10262873	0.0218132	SOX9	ENST00000304567.5|RRM2|ENSG00000171848.9|ribonucleotide reductase M2
hg19_v2_chr17_+_7477040_7477257	0.021774	SOX9	ENST00000581384.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1 	ENST00000577929.1|EIF4A1|ENSG00000161960.10|eukaryotic translation initiation factor 4A1
hg19_v2_chrX_-_2418936_2419024	0.0217382	SOX9	ENST00000461691.1|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381223.4|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000381222.2|ZBED1|ENSG00000214717.5|zinc finger, BED-type containing 1 	ENST00000412516.2|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked 	ENST00000334651.5|DHRSX|ENSG00000169084.8|dehydrogenase/reductase (SDR family) X-linked
hg19_v2_chr7_+_111846741_111846776	0.0216938	SOX9	ENST00000421043.1|ZNF277|ENSG00000198839.5|zinc finger protein 277 	ENST00000425229.1|ZNF277|ENSG00000198839.5|zinc finger protein 277 	ENST00000450657.1|ZNF277|ENSG00000198839.5|zinc finger protein 277
hg19_v2_chr1_+_248112160_248112160	0.0216482	SOX9	ENST00000357191.3|OR2L8|ENSG00000196936.3|olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
hg19_v2_chr9_-_139760717_139760728	0.0216449	SOX9	ENST00000371648.4|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1
hg19_v2_chr8_-_80993010_80993073	0.021625	SOX9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr2_-_128568721_128568766	0.0215432	SOX9	ENST00000322313.4|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000393006.1|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000409658.3|WDR33|ENSG00000136709.7|WD repeat domain 33 	ENST00000436787.1|WDR33|ENSG00000136709.7|WD repeat domain 33
hg19_v2_chr6_+_84569359_84569445	0.0214039	SOX9	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chrX_+_107288239_107288259	0.021256	SOX9	ENST00000217957.5|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr9_-_139760737_139760769	0.0210759	SOX9	ENST00000371649.1|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1 	ENST00000224073.1|EDF1|ENSG00000107223.8|endothelial differentiation-related factor 1
hg19_v2_chr17_+_36861735_36861795	0.0209459	SOX9	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr9_+_27109440_27109456	0.020559	SOX9	ENST00000519080.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr22_-_30970560_30970577	0.0205477	SOX9	ENST00000402369.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1 	ENST00000406361.1|GAL3ST1|ENSG00000128242.8|galactose-3-O-sulfotransferase 1
hg19_v2_chr7_-_107643567_107643657	0.020477	SOX9	ENST00000393559.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000439976.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000393560.1|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr17_-_38210644_38210675	0.0202739	SOX9	ENST00000394128.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000394127.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000356271.3|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000535071.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000580885.1|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000543759.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000537674.2|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000580517.1|MED24|ENSG00000008838.13|mediator complex subunit 24 	ENST00000578161.1|MED24|ENSG00000008838.13|mediator complex subunit 24
hg19_v2_chr3_+_111260954_111260977	0.0202453	SOX9	ENST00000283285.5|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr12_-_45270077_45270143	0.0201447	SOX9	ENST00000551601.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000549027.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken) 	ENST00000452445.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr10_-_128975273_128975273	0.0201061	SOX9	ENST00000424811.2|FAM196A|ENSG00000188916.4|family with sequence similarity 196, member A
hg19_v2_chr6_+_97372645_97372665	0.0201017	SOX9	ENST00000536676.1|KLHL32|ENSG00000186231.12|kelch-like family member 32 	ENST00000544166.1|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr12_-_57882498_57882509	0.020069	SOX9	ENST00000550288.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr4_+_78079570_78079586	0.0200349	SOX9	ENST00000509972.1|CCNG2|ENSG00000138764.9|cyclin G2
hg19_v2_chr1_-_31538517_31538632	0.0200318	SOX9	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr7_-_99679324_99679371	0.0197469	SOX9	ENST00000292393.5|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000413658.2|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000412947.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000441298.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000449785.1|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000299667.4|ZNF3|ENSG00000166526.12|zinc finger protein 3 	ENST00000424697.1|ZNF3|ENSG00000166526.12|zinc finger protein 3
hg19_v2_chr2_-_158182410_158182446	0.019517	SOX9	ENST00000419116.2|ERMN|ENSG00000136541.10|ermin, ERM-like protein 	ENST00000410096.1|ERMN|ENSG00000136541.10|ermin, ERM-like protein
hg19_v2_chr7_+_16685756_16685820	0.0191955	SOX9	ENST00000415365.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000258761.3|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000433922.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000452975.2|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2 	ENST00000405202.1|BZW2|ENSG00000136261.10|basic leucine zipper and W2 domains 2
hg19_v2_chr14_-_85996332_85996403	0.0191636	SOX9	ENST00000380722.1|RP11-497E19.1|ENSG00000205562.1|RP11-497E19.1
hg19_v2_chr17_-_7297519_7297593	0.0191524	SOX9	ENST00000576362.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000571078.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr12_-_95945246_95945270	0.0190476	SOX9	ENST00000258499.3|USP44|ENSG00000136014.7|ubiquitin specific peptidase 44
hg19_v2_chr6_+_106535455_106535637	0.0188806	SOX9	ENST00000424894.1|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr9_-_85882145_85882202	0.0188435	SOX9	ENST00000328788.1|FRMD3|ENSG00000172159.11|FERM domain containing 3
hg19_v2_chr4_+_37978891_37978931	0.0188288	SOX9	ENST00000446803.2|TBC1D1|ENSG00000065882.11|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
hg19_v2_chr3_-_48470838_48470872	0.018784	SOX9	ENST00000358459.4|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000358536.4|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chr15_+_40886439_40886493	0.0187017	SOX9	ENST00000532056.1|CASC5|ENSG00000137812.15|cancer susceptibility candidate 5 	ENST00000399668.2|CASC5|ENSG00000137812.15|cancer susceptibility candidate 5
hg19_v2_chr16_-_15736881_15736928	0.0186173	SOX9	ENST00000540441.2|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr18_-_13915530_13915540	0.0184806	SOX9	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr11_-_33183006_33183046	0.0184758	SOX9	ENST00000524827.1|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000323959.4|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa 	ENST00000431742.2|CSTF3|ENSG00000176102.7|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
hg19_v2_chrY_+_15016013_15016029	0.018474	SOX9	ENST00000360160.4|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 	ENST00000454054.1|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr16_+_1832902_1833008	0.0184186	SOX9	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr16_+_27561449_27561481	0.018353	SOX9	ENST00000261588.4|KIAA0556|ENSG00000047578.8|KIAA0556
hg19_v2_chr17_+_46970178_46970180	0.0183494	SOX9	ENST00000393366.2|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000506855.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chrX_+_84498989_84499003	0.0182248	SOX9	ENST00000395402.1|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr11_-_126138808_126138877	0.0182036	SOX9	ENST00000332118.6|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein) 	ENST00000532259.1|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein)
hg19_v2_chr16_+_1662326_1662442	0.017918	SOX9	ENST00000397412.3|CRAMP1L|ENSG00000007545.11|Crm, cramped-like (Drosophila)
hg19_v2_chr2_-_61765315_61765422	0.0178531	SOX9	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr1_+_10459111_10459175	0.0177426	SOX9	ENST00000541529.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000270776.8|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000483936.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase 	ENST00000538557.1|PGD|ENSG00000142657.16|phosphogluconate dehydrogenase
hg19_v2_chr1_-_184723701_184723760	0.0173082	SOX9	ENST00000367512.3|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr19_+_7660716_7660802	0.0172503	SOX9	ENST00000160298.4|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3 	ENST00000446248.2|CAMSAP3|ENSG00000076826.5|calmodulin regulated spectrin-associated protein family, member 3
hg19_v2_chr7_+_138145076_138145116	0.0171338	SOX9	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr20_+_42543504_42543549	0.0168617	SOX9	ENST00000341197.4|TOX2|ENSG00000124191.13|TOX high mobility group box family member 2
hg19_v2_chr16_+_22524844_22525003	0.0168601	SOX9	ENST00000538606.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000424340.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000517539.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5 	ENST00000528249.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr20_-_30310336_30310400	0.0168236	SOX9	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr10_-_13570533_13570533	0.0165629	SOX9	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr3_+_39509163_39509180	0.0163526	SOX9	ENST00000436143.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000441980.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000311042.6|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr19_-_8070474_8070564	0.016324	SOX9	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr16_-_71918033_71918107	0.0161458	SOX9	ENST00000425432.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000313565.6|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000568666.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000562797.1|ZNF821|ENSG00000102984.10|zinc finger protein 821 	ENST00000564134.1|ZNF821|ENSG00000102984.10|zinc finger protein 821
hg19_v2_chrX_-_153599578_153599656	0.015751	SOX9	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr12_-_49463753_49463808	0.0155049	SOX9	ENST00000301068.6|RHEBL1|ENSG00000167550.6|Ras homolog enriched in brain like 1
hg19_v2_chr7_+_29519486_29519549	0.0154475	SOX9	ENST00000409041.4|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr3_+_44690211_44690267	0.0154141	SOX9	ENST00000396056.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000432115.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000415571.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000399560.2|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000296092.3|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000542250.1|ZNF35|ENSG00000169981.6|zinc finger protein 35 	ENST00000453164.1|ZNF35|ENSG00000169981.6|zinc finger protein 35
hg19_v2_chr11_+_64949899_64949941	0.0151562	SOX9	ENST00000531068.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527699.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000533909.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000527323.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr6_-_42713792_42713847	0.0151237	SOX9	ENST00000372876.1|TBCC|ENSG00000124659.5|tubulin folding cofactor C
hg19_v2_chr16_+_524850_524883	0.0151197	SOX9	ENST00000450428.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II) 	ENST00000452814.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr1_-_1243252_1243318	0.0150089	SOX9	ENST00000353662.3|ACAP3|ENSG00000131584.14|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v2_chr17_-_42441204_42441243	0.0150052	SOX9	ENST00000293443.7|FAM171A2|ENSG00000161682.10|family with sequence similarity 171, member A2
hg19_v2_chr11_+_131781290_131781362	0.0149521	SOX9	ENST00000425719.2|NTM|ENSG00000182667.10|neurotrimin 	ENST00000374784.1|NTM|ENSG00000182667.10|neurotrimin
hg19_v2_chr7_-_107643674_107643700	0.014907	SOX9	ENST00000222399.6|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr18_-_34408902_34409022	0.0147873	SOX9	ENST00000593035.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000383056.3|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000588909.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2 	ENST00000590337.1|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr12_-_24103954_24103972	0.0146419	SOX9	ENST00000441133.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5 	ENST00000545921.1|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr19_-_40324767_40324841	0.0146245	SOX9	ENST00000601972.1|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000430012.2|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000323039.5|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 	ENST00000348817.3|DYRK1B|ENSG00000105204.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B
hg19_v2_chr6_+_53976211_53976222	0.0143801	SOX9	ENST00000503951.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr15_-_56035177_56035355	0.0142759	SOX9	ENST00000389286.4|PRTG|ENSG00000166450.8|protogenin 	ENST00000561292.1|PRTG|ENSG00000166450.8|protogenin
hg19_v2_chr16_+_19467772_19467839	0.0139325	SOX9	ENST00000219821.5|TMC5|ENSG00000103534.12|transmembrane channel-like 5 	ENST00000561503.1|TMC5|ENSG00000103534.12|transmembrane channel-like 5 	ENST00000564959.1|TMC5|ENSG00000103534.12|transmembrane channel-like 5
hg19_v2_chr1_+_248223984_248223984	0.01393	SOX9	ENST00000359959.3|OR2L3|ENSG00000198128.3|olfactory receptor, family 2, subfamily L, member 3
hg19_v2_chr21_-_33104367_33104441	0.0135848	SOX9	ENST00000286835.7|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4 	ENST00000399804.1|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4
hg19_v2_chr12_+_64238539_64238600	0.0134646	SOX9	ENST00000357825.3|SRGAP1|ENSG00000196935.4|SLIT-ROBO Rho GTPase activating protein 1
hg19_v2_chr7_-_27219849_27219880	0.0134437	SOX9	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr6_-_46293378_46293415	0.0128627	SOX9	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chr16_-_27561209_27561244	0.0126538	SOX9	ENST00000356183.4|GTF3C1|ENSG00000077235.13|general transcription factor IIIC, polypeptide 1, alpha 220kDa 	ENST00000561623.1|GTF3C1|ENSG00000077235.13|general transcription factor IIIC, polypeptide 1, alpha 220kDa
hg19_v2_chr22_-_50524298_50524331	0.0123457	SOX9	ENST00000311597.5|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr6_+_32939964_32939994	0.0123237	SOX9	ENST00000607833.1|BRD2|ENSG00000204256.8|bromodomain containing 2
hg19_v2_chr12_-_111358372_111358389	0.012323	SOX9	ENST00000548438.1|MYL2|ENSG00000111245.10|myosin, light chain 2, regulatory, cardiac, slow 	ENST00000228841.8|MYL2|ENSG00000111245.10|myosin, light chain 2, regulatory, cardiac, slow
hg19_v2_chr3_+_85008089_85008189	0.0122374	SOX9	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chrX_-_15872914_15873054	0.0120194	SOX9	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr12_-_91546926_91546972	0.0119984	SOX9	ENST00000550758.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr6_+_72596604_72596727	0.011967	SOX9	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr3_+_189507460_189507471	0.0118184	SOX9	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr19_+_16222678_16222722	0.011741	SOX9	ENST00000586682.1|RAB8A|ENSG00000167461.7|RAB8A, member RAS oncogene family
hg19_v2_chr14_+_57857262_57857334	0.0117389	SOX9	ENST00000555166.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000556492.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit 	ENST00000554703.1|NAA30|ENSG00000139977.9|N(alpha)-acetyltransferase 30, NatC catalytic subunit
hg19_v2_chr9_-_124989804_124989865	0.0116445	SOX9	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr10_+_104678102_104678119	0.0113171	SOX9	ENST00000433628.2|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr7_+_23146271_23146285	0.0113134	SOX9	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr2_-_65357225_65357267	0.0112841	SOX9	ENST00000398529.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409751.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000356214.7|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409892.1|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family 	ENST00000409784.3|RAB1A|ENSG00000138069.12|RAB1A, member RAS oncogene family
hg19_v2_chr6_+_30594619_30594665	0.0112753	SOX9	ENST00000318999.7|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376485.4|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376478.2|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000319027.5|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000376483.4|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000329992.8|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1 	ENST00000330083.5|ATAT1|ENSG00000137343.13|alpha tubulin acetyltransferase 1
hg19_v2_chr19_+_39971505_39971518	0.0112195	SOX9	ENST00000544017.1|TIMM50|ENSG00000105197.6|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)
hg19_v2_chr3_+_9439579_9439592	0.0111698	SOX9	ENST00000406341.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr7_-_14942944_14942997	0.0111627	SOX9	ENST00000403951.2|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr12_+_54674482_54674564	0.0111552	SOX9	ENST00000547708.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000340913.6|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000551702.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000330752.8|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1 	ENST00000547276.1|HNRNPA1|ENSG00000135486.13|heterogeneous nuclear ribonucleoprotein A1
hg19_v2_chr9_-_73483958_73483985	0.0110786	SOX9	ENST00000377101.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377106.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000360823.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377105.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr8_-_70745575_70745625	0.0110696	SOX9	ENST00000524945.1|SLCO5A1|ENSG00000137571.6|solute carrier organic anion transporter family, member 5A1
hg19_v2_chr7_+_128349106_128349128	0.011063	SOX9	ENST00000485070.1|FAM71F1|ENSG00000135248.11|family with sequence similarity 71, member F1
hg19_v2_chrX_+_107288197_107288212	0.0108824	SOX9	ENST00000415430.3|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr9_+_134269439_134269506	0.0108431	SOX9	ENST00000405995.1|PRRC2B|ENSG00000130723.13|proline-rich coiled-coil 2B
hg19_v2_chr3_-_52001448_52001478	0.0106933	SOX9	ENST00000461554.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000395013.3|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000428823.2|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000483411.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000461544.1|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4 	ENST00000355852.2|PCBP4|ENSG00000090097.16|poly(rC) binding protein 4
hg19_v2_chr2_+_220491973_220492049	0.0106434	SOX9	ENST00000358055.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr12_-_81763127_81763171	0.0106307	SOX9	ENST00000541017.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr2_+_111880242_111880289	0.010567	SOX9	ENST00000393252.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr2_+_172949468_172949522	0.0105167	SOX9	ENST00000361609.4|DLX1|ENSG00000144355.10|distal-less homeobox 1 	ENST00000469444.2|DLX1|ENSG00000144355.10|distal-less homeobox 1
hg19_v2_chr3_-_16306432_16306491	0.0104541	SOX9	ENST00000383775.4|DPH3|ENSG00000154813.5|diphthamide biosynthesis 3 	ENST00000488423.1|DPH3|ENSG00000154813.5|diphthamide biosynthesis 3
hg19_v2_chr1_+_33116743_33116754	0.0103332	SOX9	ENST00000414241.3|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373493.5|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr1_+_62417957_62417993	0.0102434	SOX9	ENST00000307297.7|INADL|ENSG00000132849.14|InaD-like (Drosophila) 	ENST00000543708.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr3_+_39509070_39509101	0.0102293	SOX9	ENST00000354668.4|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000428261.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000420739.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000415443.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000447324.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000383754.3|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr6_-_105850937_105850983	0.0101028	SOX9	ENST00000369110.3|PREP|ENSG00000085377.9|prolyl endopeptidase
hg19_v2_chr17_+_46970127_46970132	0.00997488	SOX9	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr11_-_35440796_35440916	0.00997218	SOX9	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr7_+_5632436_5632454	0.00992288	SOX9	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chr6_-_112408661_112408743	0.00984689	SOX9	ENST00000368662.5|TUBE1|ENSG00000074935.9|tubulin, epsilon 1
hg19_v2_chr15_+_101402041_101402067	0.00984511	SOX9	ENST00000558475.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000558641.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1	ENST00000559673.1|RP11-66B24.1|ENSG00000259604.1|RP11-66B24.1
hg19_v2_chr18_+_42260861_42260882	0.00980187	SOX9	ENST00000282030.5|SETBP1|ENSG00000152217.12|SET binding protein 1
hg19_v2_chr11_+_64949343_64949454	0.00979231	SOX9	ENST00000279247.6|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000532285.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit 	ENST00000534373.1|CAPN1|ENSG00000014216.11|calpain 1, (mu/I) large subunit
hg19_v2_chr12_-_49075941_49076001	0.0096952	SOX9	ENST00000553086.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2 	ENST00000548304.1|KANSL2|ENSG00000139620.8|KAT8 regulatory NSL complex subunit 2
hg19_v2_chr11_+_1411503_1411521	0.0096343	SOX9	ENST00000526678.1|BRSK2|ENSG00000174672.11|BR serine/threonine kinase 2
hg19_v2_chr13_+_111767650_111767874	0.00961998	SOX9	ENST00000449979.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7 	ENST00000370623.3|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr3_+_196466710_196466824	0.0094569	SOX9	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr8_+_102504979_102505010	0.00933859	SOX9	ENST00000395927.1|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila)
hg19_v2_chr19_-_44124019_44124030	0.009312	SOX9	ENST00000300811.3|ZNF428|ENSG00000131116.7|zinc finger protein 428
hg19_v2_chr14_-_64761078_64761128	0.00925279	SOX9	ENST00000341099.4|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000556275.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000542956.1|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000353772.3|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000357782.2|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta) 	ENST00000267525.6|ESR2|ENSG00000140009.14|estrogen receptor 2 (ER beta)
hg19_v2_chr1_-_50889155_50889173	0.00923291	SOX9	ENST00000404795.3|DMRTA2|ENSG00000142700.7|DMRT-like family A2
hg19_v2_chr10_+_74653330_74653345	0.00913785	SOX9	ENST00000334011.5|OIT3|ENSG00000138315.8|oncoprotein induced transcript 3
hg19_v2_chrX_+_85403487_85403625	0.00898897	SOX9	ENST00000373125.4|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr15_+_89922345_89922362	0.00889553	SOX9	ENST00000558982.1|LINC00925|ENSG00000255571.2|long intergenic non-protein coding RNA 925
hg19_v2_chr14_-_88459182_88459236	0.00873402	SOX9	ENST00000544807.2|GALC|ENSG00000054983.12|galactosylceramidase
hg19_v2_chr12_+_54891495_54891526	0.00868143	SOX9	ENST00000293373.6|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr17_-_39743139_39743173	0.00853479	SOX9	ENST00000167586.6|KRT14|ENSG00000186847.5|keratin 14
hg19_v2_chr8_+_26435359_26435426	0.00827973	SOX9	ENST00000311151.5|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr8_-_61429315_61429359	0.00818132	SOX9	ENST00000530725.1|RP11-163N6.2|ENSG00000251396.2|RP11-163N6.2	ENST00000532232.1|RP11-163N6.2|ENSG00000251396.2|RP11-163N6.2
hg19_v2_chr7_+_2671568_2671606	0.00794849	SOX9	ENST00000258796.7|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr17_-_40306934_40307035	0.00792763	SOX9	ENST00000592574.1|CTD-2132N18.3|ENSG00000267261.1|Uncharacterized protein  	ENST00000550406.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000547517.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000393860.3|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000346213.4|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr18_-_34409116_34409158	0.00776894	SOX9	ENST00000334295.4|TPGS2|ENSG00000134779.10|tubulin polyglutamylase complex subunit 2
hg19_v2_chr14_-_55878538_55878576	0.00772409	SOX9	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr12_-_71003568_71003629	0.00764436	SOX9	ENST00000547715.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000451516.2|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000538708.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000550857.1|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B 	ENST00000261266.5|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chr18_+_34409069_34409203	0.00764389	SOX9	ENST00000543923.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000280020.5|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000435985.2|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000592521.1|KIAA1328|ENSG00000150477.10|KIAA1328 	ENST00000587139.1|KIAA1328|ENSG00000150477.10|KIAA1328
hg19_v2_chr2_-_175629164_175629224	0.00758953	SOX9	ENST00000409323.1|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle) 	ENST00000261007.5|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle) 	ENST00000348749.5|CHRNA1|ENSG00000138435.10|cholinergic receptor, nicotinic, alpha 1 (muscle)
hg19_v2_chr5_+_60240943_60241011	0.00757366	SOX9	ENST00000296597.5|NDUFAF2|ENSG00000164182.6|NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
hg19_v2_chr1_-_197115818_197115829	0.00754259	SOX9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr15_-_42186248_42186275	0.00753647	SOX9	ENST00000320955.6|SPTBN5|ENSG00000137877.8|spectrin, beta, non-erythrocytic 5
hg19_v2_chr2_-_86422523_86422595	0.00719075	SOX9	ENST00000442664.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000409051.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000449247.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial
hg19_v2_chrX_+_84499038_84499078	0.00717951	SOX9	ENST00000373165.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr14_-_73493825_73493920	0.00716985	SOX9	ENST00000318876.5|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1 	ENST00000556143.1|ZFYVE1|ENSG00000165861.9|zinc finger, FYVE domain containing 1
hg19_v2_chr5_+_179159813_179159851	0.00703089	SOX9	ENST00000292599.3|MAML1|ENSG00000161021.7|mastermind-like 1 (Drosophila)
hg19_v2_chr5_-_157079372_157079395	0.00697923	SOX9	ENST00000311371.5|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr12_-_5352315_5352324	0.00694082	SOX9	ENST00000536518.1|RP11-319E16.1|ENSG00000256115.1|RP11-319E16.1
hg19_v2_chr16_+_3019246_3019304	0.0068344	SOX9	ENST00000318782.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV 	ENST00000293978.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr2_-_157198860_157198978	0.00677551	SOX9	ENST00000409572.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr20_+_61147651_61147666	0.00672822	SOX9	ENST00000370527.3|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166 	ENST00000370524.2|C20orf166|ENSG00000174407.7|chromosome 20 open reading frame 166
hg19_v2_chr7_-_91794590_91794590	0.00629575	SOX9	ENST00000430130.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1 	ENST00000454089.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr11_+_22694123_22694154	0.00602448	SOX9	ENST00000534801.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr3_-_11623804_11623865	0.00599851	SOX9	ENST00000451674.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr12_+_93096619_93096750	0.00596198	SOX9	ENST00000397833.3|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr5_+_140602904_140603078	0.0059002	SOX9	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr21_+_34398153_34398250	0.00588347	SOX9	ENST00000382357.3|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2 	ENST00000430860.1|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2 	ENST00000333337.3|OLIG2|ENSG00000205927.4|oligodendrocyte lineage transcription factor 2
hg19_v2_chr8_+_102504651_102504683	0.00587396	SOX9	ENST00000251808.3|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila) 	ENST00000521085.1|GRHL2|ENSG00000083307.6|grainyhead-like 2 (Drosophila)
hg19_v2_chr14_-_91976488_91976661	0.00582006	SOX9	ENST00000554684.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000337238.4|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000428424.2|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium) 	ENST00000554511.1|SMEK1|ENSG00000100796.13|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
hg19_v2_chr8_+_79578282_79578334	0.00560555	SOX9	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chrX_-_73512358_73512402	0.0055999	SOX9	ENST00000602776.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr5_-_158526693_158526706	0.00554603	SOX9	ENST00000380654.4|EBF1|ENSG00000164330.12|early B-cell factor 1
hg19_v2_chr1_-_26232522_26232644	0.0053062	SOX9	ENST00000399728.1|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr6_-_64029879_64029891	0.00506599	SOX9	ENST00000370658.5|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000485906.2|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain 	ENST00000370657.4|LGSN|ENSG00000146166.12|lengsin, lens protein with glutamine synthetase domain
hg19_v2_chr16_+_66400533_66400545	0.00502964	SOX9	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr20_-_34330129_34330234	0.00497072	SOX9	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr5_+_179135246_179135327	0.00487837	SOX9	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr7_+_150076406_150076456	0.004656	SOX9	ENST00000329630.5|ZNF775|ENSG00000196456.4|zinc finger protein 775
hg19_v2_chr7_+_128379449_128379463	0.00435157	SOX9	ENST00000479257.1|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr6_+_37787262_37787291	0.00422346	SOX9	ENST00000287218.4|ZFAND3|ENSG00000156639.7|zinc finger, AN1-type domain 3
hg19_v2_chr15_+_85144217_85144281	0.00401714	SOX9	ENST00000540936.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000448803.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546275.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000546148.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000442073.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000334141.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000358472.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000502939.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000379358.3|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000327179.6|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr6_-_24877490_24877583	0.00398149	SOX9	ENST00000540914.1|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B 	ENST00000378023.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr6_-_42110342_42110365	0.00361716	SOX9	ENST00000356542.5|C6orf132|ENSG00000188112.4|chromosome 6 open reading frame 132
hg19_v2_chr7_+_128379346_128379447	0.00355331	SOX9	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr9_+_116263639_116263707	0.00308609	SOX9	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr16_+_3019552_3019559	0.00297085	SOX9	ENST00000572687.1|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr12_-_99288536_99288677	0.00293926	SOX9	ENST00000549797.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000333732.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000341752.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr21_+_17442799_17442853	0.00266605	SOX9	ENST00000602580.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000458468.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000602935.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr19_+_45971246_45971265	0.00252035	SOX9	ENST00000585836.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000417353.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000353609.3|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000591858.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000443841.2|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B 	ENST00000590335.1|FOSB|ENSG00000125740.9|FBJ murine osteosarcoma viral oncogene homolog B
hg19_v2_chr16_-_30798492_30798535	0.0021519	SOX9	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr6_+_43139037_43139094	0.00191404	SOX9	ENST00000265354.4|SRF|ENSG00000112658.6|serum response factor (c-fos serum response element-binding transcription factor)
hg19_v2_chr10_-_97321165_97321176	0.00190621	SOX9	ENST00000306402.6|SORBS1|ENSG00000095637.16|sorbin and SH3 domain containing 1
hg19_v2_chr3_-_48754599_48754711	0.00189575	SOX9	ENST00000413654.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000454335.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000440424.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449610.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443964.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000417896.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000413298.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000449563.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000443853.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000437427.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000446860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000412850.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000424035.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000340879.4|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000431721.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000434860.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000328631.5|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2 	ENST00000432678.2|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chr5_-_146833803_146833829	0.00183993	SOX9	ENST00000512722.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr14_+_55518349_55518423	0.0018239	SOX9	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr17_+_75447326_75447457	0.00179689	SOX9	ENST00000591088.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr10_+_104535994_104536014	0.00178768	SOX9	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr11_+_67007518_67007533	0.00170412	SOX9	ENST00000530342.1|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A 	ENST00000308783.5|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A
hg19_v2_chr5_+_170736243_170736288	0.00169991	SOX9	ENST00000296921.5|TLX3|ENSG00000164438.5|T-cell leukemia homeobox 3
hg19_v2_chr12_-_10251603_10251619	0.00162627	SOX9	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr10_-_61122934_61122940	0.0014689	SOX9	ENST00000512919.1|FAM13C|ENSG00000148541.8|family with sequence similarity 13, member C
hg19_v2_chr10_-_104953009_104953061	0.00145636	SOX9	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr21_+_26934165_26934221	0.00118421	SOX9	ENST00000456917.1|MIR155HG|ENSG00000234883.2|MIR155 host gene (non-protein coding)
hg19_v2_chr19_+_12949251_12949370	0.00104768	SOX9	ENST00000251472.4|MAST1|ENSG00000105613.5|microtubule associated serine/threonine kinase 1
hg19_v2_chr6_-_27114577_27114642	0.00101781	SOX9	ENST00000356950.1|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk 	ENST00000396891.4|HIST1H2BK|ENSG00000197903.6|histone cluster 1, H2bk
hg19_v2_chr7_-_99774945_99775026	0.00097985	SOX9	ENST00000292377.2|GPC2|ENSG00000213420.3|glypican 2
hg19_v2_chr5_+_74633036_74633085	0.000878807	SOX9	ENST00000343975.5|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr5_+_140797296_140797427	0.000824483	SOX9	ENST00000398594.2|PCDHGB7|ENSG00000254122.1|protocadherin gamma subfamily B, 7
hg19_v2_chr6_+_97372596_97372644	0.000743361	SOX9	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr12_-_6233828_6233843	0.000704078	SOX9	ENST00000572068.1|VWF|ENSG00000110799.9|von Willebrand factor 	ENST00000261405.5|VWF|ENSG00000110799.9|von Willebrand factor
hg19_v2_chr6_-_135375921_135375969	0.00065797	SOX9	ENST00000367820.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000314674.3|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000524715.1|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000415177.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae) 	ENST00000367826.2|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae)
hg19_v2_chr1_-_151689259_151689290	0.000508177	SOX9	ENST00000420342.1|CELF3|ENSG00000159409.10|CUGBP, Elav-like family member 3 	ENST00000290583.4|CELF3|ENSG00000159409.10|CUGBP, Elav-like family member 3
hg19_v2_chr7_+_2671663_2671790	0.000473437	SOX9	ENST00000407643.1|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr6_+_97372734_97372760	0.000400627	SOX9	ENST00000539200.1|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr4_+_175205100_175205161	4.8162e-05	SOX9	ENST00000515299.1|CEP44|ENSG00000164118.8|centrosomal protein 44kDa
