hg19_v2_chr11_-_94965667_94965705	0.112767	SOX4	ENST00000542176.1|SESN3|ENSG00000149212.6|sestrin 3 	ENST00000278499.2|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr5_+_102200948_102201183	0.0991435	SOX4	ENST00000511477.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000506006.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000509832.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr10_-_18948156_18948202	0.0961225	SOX4	ENST00000414939.1|ARL5B-AS1|ENSG00000152487.6|ARL5B antisense RNA 1 	ENST00000449529.1|ARL5B-AS1|ENSG00000152487.6|ARL5B antisense RNA 1 	ENST00000456217.1|ARL5B-AS1|ENSG00000152487.6|ARL5B antisense RNA 1 	ENST00000444660.1|ARL5B-AS1|ENSG00000152487.6|ARL5B antisense RNA 1
hg19_v2_chr12_+_28605426_28605475	0.0958135	SOX4	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr3_-_171489085_171489158	0.0887361	SOX4	ENST00000418087.1|PLD1|ENSG00000075651.11|phospholipase D1, phosphatidylcholine-specific
hg19_v2_chr14_+_75746664_75746683	0.0861247	SOX4	ENST00000557139.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr11_-_85430088_85430151	0.0838539	SOX4	ENST00000533057.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2 	ENST00000533892.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2
hg19_v2_chr1_+_109419804_109419878	0.0812062	SOX4	ENST00000435475.1|GPSM2|ENSG00000121957.8|G-protein signaling modulator 2
hg19_v2_chr17_+_67498396_67498409	0.0748505	SOX4	ENST00000588110.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr7_-_84122033_84122049	0.0669327	SOX4	ENST00000424555.1|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr13_-_39611956_39611976	0.065713	SOX4	ENST00000418503.1|PROSER1|ENSG00000120685.15|proline and serine rich 1
hg19_v2_chr11_+_113930955_113930979	0.0620464	SOX4	ENST00000535700.1|ZBTB16|ENSG00000109906.9|zinc finger and BTB domain containing 16
hg19_v2_chr12_-_10282836_10282863	0.061622	SOX4	ENST00000304084.8|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000353231.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000525605.1|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr2_+_220309379_220309413	0.0608077	SOX4	ENST00000451076.1|SPEG|ENSG00000072195.10|SPEG complex locus
hg19_v2_chr11_-_85430204_85430271	0.0605011	SOX4	ENST00000389958.3|SYTL2|ENSG00000137501.12|synaptotagmin-like 2 	ENST00000527794.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2
hg19_v2_chr11_-_18062335_18062335	0.0588882	SOX4	ENST00000341556.2|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr7_-_84121858_84121870	0.0556218	SOX4	ENST00000448879.1|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr15_-_33447055_33447241	0.0551386	SOX4	ENST00000559047.1|FMN1|ENSG00000248905.4|formin 1 	ENST00000561249.1|FMN1|ENSG00000248905.4|formin 1
hg19_v2_chr3_+_181429704_181429722	0.0537952	SOX4	ENST00000431565.2|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2 	ENST00000325404.1|SOX2|ENSG00000181449.2|SRY (sex determining region Y)-box 2
hg19_v2_chr4_-_87028478_87028514	0.0529653	SOX4	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr7_+_134551583_134551599	0.0511972	SOX4	ENST00000435928.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_-_93645818_93645918	0.0508919	SOX4	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr11_-_85430163_85430200	0.0508753	SOX4	ENST00000529581.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2 	ENST00000533577.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2
hg19_v2_chr4_-_140544386_140544413	0.0500998	SOX4	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr5_+_65222438_65222471	0.0495927	SOX4	ENST00000380938.2|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr10_+_18948311_18948417	0.0494814	SOX4	ENST00000377275.3|ARL5B|ENSG00000165997.4|ADP-ribosylation factor-like 5B
hg19_v2_chr8_-_6420759_6420775	0.0490459	SOX4	ENST00000523120.1|ANGPT2|ENSG00000091879.9|angiopoietin 2
hg19_v2_chr1_+_25664408_25664408	0.0471314	SOX4	ENST00000374358.4|TMEM50A|ENSG00000183726.6|transmembrane protein 50A
hg19_v2_chr4_-_139163491_139163510	0.0455248	SOX4	ENST00000280612.5|SLC7A11|ENSG00000151012.9|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11
hg19_v2_chr12_-_10282742_10282817	0.0450856	SOX4	ENST00000298523.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000396484.2|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000310002.4|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr10_+_22605374_22605387	0.0448358	SOX4	ENST00000448361.1|COMMD3|ENSG00000148444.11|COMM domain containing 3
hg19_v2_chr13_+_34392200_34392221	0.0441386	SOX4	ENST00000434425.1|RFC3|ENSG00000133119.8|replication factor C (activator 1) 3, 38kDa
hg19_v2_chr1_+_97188188_97188273	0.0438618	SOX4	ENST00000541987.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr1_-_108231101_108231133	0.0438119	SOX4	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr2_-_114647327_114647351	0.0435574	SOX4	ENST00000602760.1|RP11-141B14.1|ENSG00000270019.1|RP11-141B14.1
hg19_v2_chr18_+_6729725_6730042	0.0431841	SOX4	ENST00000400091.2|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000583410.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28 	ENST00000584387.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr12_-_46663734_46663851	0.043075	SOX4	ENST00000550173.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr15_+_65823092_65823143	0.042896	SOX4	ENST00000566074.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr8_-_17579726_17579759	0.0425877	SOX4	ENST00000381861.3|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr1_+_185126598_185126655	0.0425731	SOX4	ENST00000450350.1|SWT1|ENSG00000116668.8|SWT1 RNA endoribonuclease homolog (S. cerevisiae)
hg19_v2_chr1_+_109419596_109419640	0.0416846	SOX4	ENST00000435987.1|GPSM2|ENSG00000121957.8|G-protein signaling modulator 2 	ENST00000264126.3|GPSM2|ENSG00000121957.8|G-protein signaling modulator 2
hg19_v2_chr5_+_93954039_93954052	0.0404796	SOX4	ENST00000265140.5|ANKRD32|ENSG00000133302.8|ankyrin repeat domain 32
hg19_v2_chr9_-_131940526_131940546	0.0403392	SOX4	ENST00000372491.2|IER5L|ENSG00000188483.6|immediate early response 5-like
hg19_v2_chr18_-_74728998_74729051	0.0399074	SOX4	ENST00000359645.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397875.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397869.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578193.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578873.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397866.4|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000528160.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000527041.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000526111.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397865.5|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000382582.3|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr12_-_122296755_122296770	0.0387952	SOX4	ENST00000289004.4|HPD|ENSG00000158104.7|4-hydroxyphenylpyruvate dioxygenase
hg19_v2_chr22_-_42336209_42336228	0.0384662	SOX4	ENST00000472374.2|CENPM|ENSG00000100162.10|centromere protein M
hg19_v2_chr5_-_124081008_124081118	0.0383977	SOX4	ENST00000306315.5|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr13_+_51913819_51913838	0.0382882	SOX4	ENST00000419898.2|SERPINE3|ENSG00000253309.2|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
hg19_v2_chr9_-_117150303_117150361	0.0373337	SOX4	ENST00000312033.3|AKNA|ENSG00000106948.12|AT-hook transcription factor
hg19_v2_chrX_+_9880412_9880550	0.0371325	SOX4	ENST00000418909.2|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr8_+_79428539_79428606	0.0360264	SOX4	ENST00000352966.5|PKIA|ENSG00000171033.8|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v2_chr7_+_23146271_23146285	0.0358125	SOX4	ENST00000545771.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr5_-_111091948_111091994	0.0342257	SOX4	ENST00000447165.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr1_+_156052354_156052380	0.0339549	SOX4	ENST00000368301.2|LMNA|ENSG00000160789.15|lamin A/C
hg19_v2_chr3_-_197024965_197025038	0.0334832	SOX4	ENST00000392382.2|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr15_+_65822756_65822893	0.0329902	SOX4	ENST00000562901.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000261875.5|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000442729.2|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000565299.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1 	ENST00000568793.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr20_-_17511962_17512033	0.0327339	SOX4	ENST00000377873.3|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin
hg19_v2_chr19_+_56111680_56111735	0.0318286	SOX4	ENST00000301073.3|ZNF524|ENSG00000171443.6|zinc finger protein 524
hg19_v2_chr1_+_244998918_244998975	0.0310115	SOX4	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr14_+_75746781_75746896	0.030497	SOX4	ENST00000555347.1|FOS|ENSG00000170345.5|FBJ murine osteosarcoma viral oncogene homolog
hg19_v2_chr3_+_132757215_132757261	0.0302716	SOX4	ENST00000321871.6|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000393130.3|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000514894.1|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000512662.1|TMEM108|ENSG00000144868.9|transmembrane protein 108
hg19_v2_chr1_+_209602771_209602908	0.03019	SOX4	ENST00000440276.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr8_-_42358742_42358787	0.0299118	SOX4	ENST00000517366.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr1_-_203151933_203151947	0.0293414	SOX4	ENST00000404436.2|CHI3L1|ENSG00000133048.8|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v2_chr14_-_23791484_23791484	0.0292218	SOX4	ENST00000594872.1|AL049829.1|ENSG00000268702.1|Uncharacterized protein
hg19_v2_chr5_+_67586465_67586534	0.0285985	SOX4	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr11_+_100784231_100784231	0.0285143	SOX4	ENST00000531183.1|ARHGAP42|ENSG00000165895.13|Rho GTPase activating protein 42
hg19_v2_chr6_+_139456226_139456300	0.0284394	SOX4	ENST00000367658.2|HECA|ENSG00000112406.4|headcase homolog (Drosophila)
hg19_v2_chr5_+_140739537_140739703	0.0283611	SOX4	ENST00000522605.1|PCDHGB2|ENSG00000253910.1|protocadherin gamma subfamily B, 2
hg19_v2_chr15_-_38519066_38519111	0.0280605	SOX4	ENST00000561320.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1	ENST00000561161.1|RP11-346D14.1|ENSG00000259380.1|RP11-346D14.1
hg19_v2_chr15_-_45670924_45670991	0.0278769	SOX4	ENST00000396659.3|GATM|ENSG00000171766.11|glycine amidinotransferase (L-arginine:glycine amidinotransferase)
hg19_v2_chr21_+_30672433_30672464	0.0278434	SOX4	ENST00000451655.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr3_-_148939835_148939842	0.0272994	SOX4	ENST00000264613.6|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr11_+_46402744_46402777	0.027206	SOX4	ENST00000533952.1|MDK|ENSG00000110492.11|midkine (neurite growth-promoting factor 2)
hg19_v2_chr3_-_38992052_38992052	0.02718	SOX4	ENST00000302328.3|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000450244.1|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit 	ENST00000444237.2|SCN11A|ENSG00000168356.7|sodium channel, voltage-gated, type XI, alpha subunit
hg19_v2_chr8_+_61822605_61822618	0.0270457	SOX4	ENST00000526936.1|AC022182.1|ENSG00000254777.1|AC022182.1
hg19_v2_chr16_-_48281305_48281419	0.0268739	SOX4	ENST00000356608.2|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr5_-_76788298_76788316	0.026644	SOX4	ENST00000511036.1|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr16_+_524900_524933	0.0257123	SOX4	ENST00000449879.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr20_-_52612705_52612736	0.0255487	SOX4	ENST00000434986.2|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1
hg19_v2_chr17_+_80416609_80416751	0.0252829	SOX4	ENST00000577410.1|NARF|ENSG00000141562.13|nuclear prelamin A recognition factor
hg19_v2_chr2_-_37899323_37899374	0.0252798	SOX4	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr6_-_27440460_27440505	0.0250224	SOX4	ENST00000377419.1|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr15_+_41136263_41136291	0.0245767	SOX4	ENST00000568823.1|SPINT1|ENSG00000166145.10|serine peptidase inhibitor, Kunitz type 1
hg19_v2_chr4_+_90033968_90033968	0.0243849	SOX4	ENST00000317005.2|TIGD2|ENSG00000180346.2|tigger transposable element derived 2
hg19_v2_chr17_+_67498538_67498570	0.024006	SOX4	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr11_-_85430356_85430420	0.0239644	SOX4	ENST00000526999.1|SYTL2|ENSG00000137501.12|synaptotagmin-like 2
hg19_v2_chr12_+_69004619_69004699	0.0235143	SOX4	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr22_-_21984282_21984359	0.022897	SOX4	ENST00000398873.3|YDJC|ENSG00000161179.9|YdjC homolog (bacterial) 	ENST00000292778.6|YDJC|ENSG00000161179.9|YdjC homolog (bacterial)
hg19_v2_chr20_-_52612468_52612547	0.0224813	SOX4	ENST00000422805.1|BCAS1|ENSG00000064787.8|breast carcinoma amplified sequence 1
hg19_v2_chr9_+_125795788_125795957	0.022362	SOX4	ENST00000373643.5|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr4_-_75024085_75024085	0.0223545	SOX4	ENST00000600169.1|AC093677.1|ENSG00000269559.1|Uncharacterized protein
hg19_v2_chr1_-_115259337_115259515	0.0222276	SOX4	ENST00000369535.4|NRAS|ENSG00000213281.4|neuroblastoma RAS viral (v-ras) oncogene homolog
hg19_v2_chr4_+_2819883_2819948	0.021779	SOX4	ENST00000511747.1|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2 	ENST00000503393.2|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2
hg19_v2_chr2_+_166430619_166430741	0.0215102	SOX4	ENST00000409420.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr13_+_110958124_110958159	0.0214887	SOX4	ENST00000400163.2|COL4A2|ENSG00000134871.13|collagen, type IV, alpha 2
hg19_v2_chr17_+_26698677_26698732	0.0214222	SOX4	ENST00000457710.3|SARM1|ENSG00000004139.9|sterile alpha and TIR motif containing 1
hg19_v2_chr13_-_41593425_41593480	0.0214175	SOX4	ENST00000239882.3|ELF1|ENSG00000120690.9|E74-like factor 1 (ets domain transcription factor)
hg19_v2_chr6_-_27440837_27440912	0.0213407	SOX4	ENST00000211936.6|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr3_-_197025447_197025533	0.0212581	SOX4	ENST00000346964.2|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000357674.4|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000314062.3|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000448528.2|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila) 	ENST00000419553.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr15_-_76304731_76304785	0.0211547	SOX4	ENST00000394907.3|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr10_+_51187938_51187938	0.0209228	SOX4	ENST00000311663.5|FAM21D|ENSG00000174196.5|family with sequence similarity 21, member D
hg19_v2_chr5_+_140235469_140235634	0.0207742	SOX4	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr14_+_50234827_50234886	0.0203008	SOX4	ENST00000554589.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2 	ENST00000557247.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr14_+_91580357_91580454	0.0199605	SOX4	ENST00000298858.4|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521081.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000520328.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000256324.10|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000524232.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522170.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000519950.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523879.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521077.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000518665.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr5_-_76788024_76788112	0.0197405	SOX4	ENST00000515253.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000414719.2|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000507654.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000514559.1|WDR41|ENSG00000164253.8|WD repeat domain 41 	ENST00000511791.1|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr10_-_105845674_105845760	0.0196069	SOX4	ENST00000353479.5|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1 	ENST00000369733.3|COL17A1|ENSG00000065618.12|collagen, type XVII, alpha 1
hg19_v2_chr4_-_69111401_69111438	0.0195359	SOX4	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr15_-_72564906_72564931	0.0194947	SOX4	ENST00000566844.1|PARP6|ENSG00000137817.12|poly (ADP-ribose) polymerase family, member 6
hg19_v2_chr14_+_32798547_32798606	0.0194616	SOX4	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr19_+_3880581_3880692	0.0192248	SOX4	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr17_+_67498295_67498333	0.0191962	SOX4	ENST00000589295.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr1_+_244998602_244998646	0.0188842	SOX4	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr5_+_140749803_140749831	0.0188295	SOX4	ENST00000576222.1|PCDHGB3|ENSG00000262209.1|protocadherin gamma subfamily B, 3
hg19_v2_chr13_+_39612442_39612482	0.0187118	SOX4	ENST00000470258.1|NHLRC3|ENSG00000188811.8|NHL repeat containing 3 	ENST00000379600.3|NHLRC3|ENSG00000188811.8|NHL repeat containing 3
hg19_v2_chr14_+_91580777_91580793	0.0186078	SOX4	ENST00000525393.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000428926.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517362.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr12_+_132379160_132379201	0.0185997	SOX4	ENST00000321867.4|ULK1|ENSG00000177169.5|unc-51 like autophagy activating kinase 1
hg19_v2_chr2_-_106015527_106015681	0.0185727	SOX4	ENST00000344213.4|FHL2|ENSG00000115641.14|four and a half LIM domains 2 	ENST00000358129.4|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr7_-_92146729_92146876	0.0184925	SOX4	ENST00000541751.1|PEX1|ENSG00000127980.11|peroxisomal biogenesis factor 1
hg19_v2_chr4_-_184243561_184243579	0.0183472	SOX4	ENST00000514470.1|CLDN24|ENSG00000185758.7|claudin 24 	ENST00000541814.1|CLDN24|ENSG00000185758.7|claudin 24
hg19_v2_chr1_-_152297679_152297722	0.018323	SOX4	ENST00000368799.1|FLG|ENSG00000143631.10|filaggrin
hg19_v2_chrX_+_12993336_12993363	0.0183045	SOX4	ENST00000380635.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr10_-_62332357_62332428	0.0181614	SOX4	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_-_165697717_165697784	0.0179927	SOX4	ENST00000439313.1|COBLL1|ENSG00000082438.11|cordon-bleu WH2 repeat protein-like 1
hg19_v2_chr14_+_32798462_32798539	0.0175303	SOX4	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr7_-_150946015_150946070	0.0175203	SOX4	ENST00000262188.8|SMARCD3|ENSG00000082014.12|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
hg19_v2_chr5_+_65222500_65222601	0.0174555	SOX4	ENST00000511297.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein 	ENST00000506030.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr14_-_31676674_31676707	0.0173926	SOX4	ENST00000399332.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1 	ENST00000556224.1|HECTD1|ENSG00000092148.8|HECT domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr14_-_51027838_51027851	0.0171945	SOX4	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr3_+_141596371_141596516	0.0169758	SOX4	ENST00000495216.1|ATP1B3|ENSG00000069849.6|ATPase, Na+/K+ transporting, beta 3 polypeptide
hg19_v2_chr8_-_80993010_80993073	0.0166443	SOX4	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr2_-_20425158_20425206	0.0165007	SOX4	ENST00000381150.1|SDC1|ENSG00000115884.6|syndecan 1
hg19_v2_chr15_+_63335899_63336001	0.0164655	SOX4	ENST00000561266.1|TPM1|ENSG00000140416.15|tropomyosin 1 (alpha)
hg19_v2_chr22_-_31688431_31688520	0.0164463	SOX4	ENST00000402249.3|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000443175.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000215912.5|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1 	ENST00000441972.1|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chr4_+_102734967_102735022	0.0164092	SOX4	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr6_-_41040195_41040263	0.0161915	SOX4	ENST00000463088.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000469104.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000486443.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr13_+_98795664_98795734	0.0160902	SOX4	ENST00000376581.5|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr10_+_73724123_73724206	0.0159547	SOX4	ENST00000373115.4|CHST3|ENSG00000122863.5|carbohydrate (chondroitin 6) sulfotransferase 3
hg19_v2_chr17_-_38928414_38928414	0.0159345	SOX4	ENST00000335552.4|KRT26|ENSG00000186393.5|keratin 26
hg19_v2_chr17_+_80416050_80416235	0.0158316	SOX4	ENST00000579198.1|NARF|ENSG00000141562.13|nuclear prelamin A recognition factor 	ENST00000390006.4|NARF|ENSG00000141562.13|nuclear prelamin A recognition factor 	ENST00000580296.1|NARF|ENSG00000141562.13|nuclear prelamin A recognition factor
hg19_v2_chr9_-_39239171_39239171	0.0158202	SOX4	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr5_+_102201509_102201528	0.0157899	SOX4	ENST00000348126.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000379787.4|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr20_+_18125727_18125755	0.0155991	SOX4	ENST00000489634.2|CSRP2BP|ENSG00000149474.9|CSRP2 binding protein
hg19_v2_chr10_-_99052382_99052413	0.0153943	SOX4	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr13_+_111855414_111855417	0.0153626	SOX4	ENST00000375737.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr4_-_159080806_159080833	0.0152826	SOX4	ENST00000590648.1|FAM198B|ENSG00000164125.11|family with sequence similarity 198, member B
hg19_v2_chr19_-_15442701_15442739	0.0151063	SOX4	ENST00000594841.1|BRD4|ENSG00000141867.13|bromodomain containing 4 	ENST00000601941.1|BRD4|ENSG00000141867.13|bromodomain containing 4
hg19_v2_chr15_+_93426514_93426562	0.0148562	SOX4	ENST00000556722.1|CHD2|ENSG00000173575.14|chromodomain helicase DNA binding protein 2
hg19_v2_chr3_-_99833333_99833357	0.0145102	SOX4	ENST00000354552.3|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000331335.5|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like 	ENST00000398326.2|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr1_+_93645314_93645476	0.0141391	SOX4	ENST00000343253.7|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr20_+_45338126_45338303	0.0138077	SOX4	ENST00000359271.2|SLC2A10|ENSG00000197496.4|solute carrier family 2 (facilitated glucose transporter), member 10
hg19_v2_chrX_+_12993202_12993239	0.0133912	SOX4	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr19_+_49128209_49128254	0.0131076	SOX4	ENST00000599748.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000443164.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2 	ENST00000599029.1|SPHK2|ENSG00000063176.11|sphingosine kinase 2
hg19_v2_chr12_+_70760056_70760085	0.0129674	SOX4	ENST00000258111.4|KCNMB4|ENSG00000135643.4|potassium large conductance calcium-activated channel, subfamily M, beta member 4
hg19_v2_chr10_+_22605304_22605372	0.0128083	SOX4	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr14_+_91581011_91581044	0.0126892	SOX4	ENST00000523894.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522322.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523771.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr12_-_99288536_99288677	0.0126482	SOX4	ENST00000549797.1|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000333732.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B 	ENST00000341752.7|ANKS1B|ENSG00000185046.14|ankyrin repeat and sterile alpha motif domain containing 1B
hg19_v2_chr6_-_139613269_139613280	0.0124033	SOX4	ENST00000358430.3|TXLNB|ENSG00000164440.10|taxilin beta
hg19_v2_chr15_-_93632421_93632446	0.0120504	SOX4	ENST00000329082.7|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr5_+_150816595_150816647	0.0119033	SOX4	ENST00000520111.1|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1 	ENST00000520701.1|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1 	ENST00000429484.2|SLC36A1|ENSG00000123643.8|solute carrier family 36 (proton/amino acid symporter), member 1
hg19_v2_chr3_+_111260980_111261016	0.0116924	SOX4	ENST00000438817.2|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chrX_-_135962876_135962896	0.0114297	SOX4	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr7_+_30185406_30185417	0.0114015	SOX4	ENST00000324489.5|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr4_-_186877502_186877563	0.0113362	SOX4	ENST00000431902.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000284776.7|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000415274.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr18_+_7946839_7946903	0.0112931	SOX4	ENST00000578916.1|PTPRM|ENSG00000173482.12|protein tyrosine phosphatase, receptor type, M
hg19_v2_chr11_-_67981295_67981334	0.0112601	SOX4	ENST00000405515.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chr5_+_140767452_140767452	0.0111732	SOX4	ENST00000519479.1|PCDHGB4|ENSG00000253953.1|protocadherin gamma subfamily B, 4
hg19_v2_chr20_-_39317868_39317884	0.0109346	SOX4	ENST00000373313.2|MAFB|ENSG00000204103.2|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
hg19_v2_chr17_+_27573875_27573881	0.0108646	SOX4	ENST00000225387.3|CRYBA1|ENSG00000108255.3|crystallin, beta A1
hg19_v2_chr16_-_48281444_48281479	0.0103773	SOX4	ENST00000537808.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11 	ENST00000569991.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr1_-_1243392_1243403	0.0103652	SOX4	ENST00000354700.5|ACAP3|ENSG00000131584.14|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v2_chr10_-_61900762_61900779	0.0101845	SOX4	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr14_+_91580732_91580746	0.0100816	SOX4	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr22_-_38480100_38480159	0.00989738	SOX4	ENST00000427592.1|SLC16A8|ENSG00000100156.6|solute carrier family 16 (monocarboxylate transporter), member 8
hg19_v2_chr7_+_134464376_134464413	0.00976994	SOX4	ENST00000454108.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000361675.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_+_81771806_81771876	0.0096115	SOX4	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr4_-_54424366_54424394	0.00960157	SOX4	ENST00000306888.2|LNX1|ENSG00000072201.9|ligand of numb-protein X 1, E3 ubiquitin protein ligase
hg19_v2_chr17_+_25621102_25621157	0.00952827	SOX4	ENST00000581440.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000262394.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583742.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000579733.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000583193.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000581185.1|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000427287.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1 	ENST00000348811.2|WSB1|ENSG00000109046.10|WD repeat and SOCS box containing 1
hg19_v2_chr10_+_11207088_11207103	0.0095145	SOX4	ENST00000608830.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr3_+_159570722_159570733	0.00950163	SOX4	ENST00000482804.1|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr8_+_9911945_9912011	0.00941933	SOX4	ENST00000518255.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chrX_+_65384182_65384231	0.00908748	SOX4	ENST00000441993.2|HEPH|ENSG00000089472.12|hephaestin 	ENST00000419594.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr5_+_102201430_102201478	0.00878425	SOX4	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr9_-_74979420_74979580	0.00869522	SOX4	ENST00000343431.2|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376956.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr15_-_74495188_74495220	0.00865492	SOX4	ENST00000563965.1|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6 	ENST00000395105.4|STRA6|ENSG00000137868.14|stimulated by retinoic acid 6
hg19_v2_chr7_+_134464414_134464429	0.00857605	SOX4	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr22_-_31688381_31688418	0.00847781	SOX4	ENST00000487265.2|PIK3IP1|ENSG00000100100.8|phosphoinositide-3-kinase interacting protein 1
hg19_v2_chrX_-_153599578_153599656	0.00829395	SOX4	ENST00000360319.4|FLNA|ENSG00000196924.10|filamin A, alpha 	ENST00000344736.4|FLNA|ENSG00000196924.10|filamin A, alpha
hg19_v2_chr8_+_79578282_79578334	0.00816712	SOX4	ENST00000263849.4|ZC2HC1A|ENSG00000104427.7|zinc finger, C2HC-type containing 1A
hg19_v2_chr15_+_91416092_91416120	0.00804275	SOX4	ENST00000559353.1|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr7_-_148725544_148725630	0.00771003	SOX4	ENST00000413966.1|PDIA4|ENSG00000155660.6|protein disulfide isomerase family A, member 4
hg19_v2_chr1_-_85930246_85930289	0.00766042	SOX4	ENST00000426972.3|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr13_-_39612176_39612258	0.00744192	SOX4	ENST00000352251.3|PROSER1|ENSG00000120685.15|proline and serine rich 1 	ENST00000350125.3|PROSER1|ENSG00000120685.15|proline and serine rich 1
hg19_v2_chr7_-_127672146_127672170	0.00726224	SOX4	ENST00000476782.1|LRRC4|ENSG00000128594.3|leucine rich repeat containing 4
hg19_v2_chr2_-_100721923_100722045	0.00718716	SOX4	ENST00000356421.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr12_-_10251539_10251560	0.00712206	SOX4	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr19_-_17375541_17375605	0.00707577	SOX4	ENST00000252597.3|USHBP1|ENSG00000130307.7|Usher syndrome 1C binding protein 1
hg19_v2_chr19_-_38720294_38720348	0.00706033	SOX4	ENST00000412732.1|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1 	ENST00000456296.1|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1
hg19_v2_chr11_-_71810258_71810304	0.00684449	SOX4	ENST00000544594.1|LAMTOR1|ENSG00000149357.5|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1
hg19_v2_chrX_-_73512358_73512402	0.00671315	SOX4	ENST00000602776.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr9_-_14313893_14313984	0.0067066	SOX4	ENST00000380921.3|NFIB|ENSG00000147862.10|nuclear factor I/B 	ENST00000380959.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr22_+_40322595_40322618	0.00663826	SOX4	ENST00000420971.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000544756.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr19_-_38720354_38720369	0.00660112	SOX4	ENST00000416611.1|DPF1|ENSG00000011332.15|D4, zinc and double PHD fingers family 1
hg19_v2_chr4_+_71588372_71588404	0.0064198	SOX4	ENST00000536664.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr14_+_24439148_24439196	0.00635331	SOX4	ENST00000543805.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2 	ENST00000534993.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v2_chr1_-_1243252_1243318	0.00599339	SOX4	ENST00000353662.3|ACAP3|ENSG00000131584.14|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3
hg19_v2_chr16_+_54964740_54964789	0.00592677	SOX4	ENST00000394636.4|IRX5|ENSG00000176842.10|iroquois homeobox 5
hg19_v2_chr8_-_8751068_8751158	0.00585329	SOX4	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr5_+_140480083_140480234	0.00582222	SOX4	ENST00000231130.2|PCDHB3|ENSG00000113205.2|protocadherin beta 3
hg19_v2_chr17_-_39123144_39123201	0.00582094	SOX4	ENST00000355612.2|KRT39|ENSG00000196859.3|keratin 39
hg19_v2_chr16_+_524850_524883	0.0057568	SOX4	ENST00000450428.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II) 	ENST00000452814.1|RAB11FIP3|ENSG00000090565.11|RAB11 family interacting protein 3 (class II)
hg19_v2_chr2_-_227050079_227050093	0.00571271	SOX4	ENST00000423838.1|AC068138.1|ENSG00000235070.3|AC068138.1
hg19_v2_chr15_+_78730531_78730612	0.00557059	SOX4	ENST00000258886.8|IREB2|ENSG00000136381.8|iron-responsive element binding protein 2
hg19_v2_chr4_+_40201954_40201986	0.00549888	SOX4	ENST00000511121.1|RHOH|ENSG00000168421.8|ras homolog family member H
hg19_v2_chr16_-_58663720_58663790	0.00528052	SOX4	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr6_+_10556215_10556240	0.00527744	SOX4	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr1_-_153940097_153940220	0.00514275	SOX4	ENST00000413622.1|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1 	ENST00000310483.6|SLC39A1|ENSG00000143570.13|solute carrier family 39 (zinc transporter), member 1
hg19_v2_chr9_-_16727978_16728010	0.00513237	SOX4	ENST00000418777.1|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000468187.2|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr14_+_91580708_91580730	0.00507137	SOX4	ENST00000518868.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr6_-_41040268_41040353	0.00464608	SOX4	ENST00000373154.2|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000244558.9|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000464633.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000424266.2|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000479950.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1 	ENST00000482515.1|OARD1|ENSG00000124596.12|O-acyl-ADP-ribose deacylase 1
hg19_v2_chr5_+_140705777_140705844	0.00451556	SOX4	ENST00000606901.1|AC005618.6|ENSG00000272070.1|AC005618.6	ENST00000606674.1|AC005618.6|ENSG00000272070.1|AC005618.6
hg19_v2_chr19_+_1248547_1248562	0.00445504	SOX4	ENST00000586757.1|MIDN|ENSG00000167470.8|midnolin 	ENST00000300952.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chrX_+_51927919_51927991	0.00443936	SOX4	ENST00000416960.1|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr6_-_123958051_123958058	0.00439912	SOX4	ENST00000546248.1|TRDN|ENSG00000186439.8|triadin
hg19_v2_chr7_+_116312411_116312502	0.00438965	SOX4	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chrX_-_63005405_63005440	0.00409871	SOX4	ENST00000374878.1|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9 	ENST00000437457.2|ARHGEF9|ENSG00000131089.9|Cdc42 guanine nucleotide exchange factor (GEF) 9
hg19_v2_chr19_-_18717627_18717660	0.00406294	SOX4	ENST00000392386.3|CRLF1|ENSG00000006016.6|cytokine receptor-like factor 1
hg19_v2_chrX_+_70503526_70503611	0.00396554	SOX4	ENST00000413858.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000450092.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr19_+_9296279_9296279	0.00383872	SOX4	ENST00000344248.2|OR7D2|ENSG00000188000.2|olfactory receptor, family 7, subfamily D, member 2
hg19_v2_chr14_+_69658194_69658272	0.00373658	SOX4	ENST00000409018.3|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2 	ENST00000409014.1|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2 	ENST00000409675.1|EXD2|ENSG00000081177.14|exonuclease 3'-5' domain containing 2
hg19_v2_chr7_-_111032971_111032986	0.00351302	SOX4	ENST00000450877.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr17_+_59489112_59489112	0.00349383	SOX4	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr5_-_76788317_76788421	0.00343898	SOX4	ENST00000296679.4|WDR41|ENSG00000164253.8|WD repeat domain 41
hg19_v2_chr2_+_172544294_172544521	0.00328166	SOX4	ENST00000358002.6|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000435234.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000443458.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2 	ENST00000412370.1|DYNC1I2|ENSG00000077380.11|dynein, cytoplasmic 1, intermediate chain 2
hg19_v2_chr10_+_11047259_11047351	0.00315615	SOX4	ENST00000379261.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000416382.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr9_+_139221880_139221932	0.00311818	SOX4	ENST00000392945.3|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1 	ENST00000440944.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chr7_+_150076406_150076456	0.00304771	SOX4	ENST00000329630.5|ZNF775|ENSG00000196456.4|zinc finger protein 775
hg19_v2_chr9_-_117150243_117150271	0.0029758	SOX4	ENST00000374088.3|AKNA|ENSG00000106948.12|AT-hook transcription factor
hg19_v2_chr3_+_141105235_141105307	0.0023609	SOX4	ENST00000503809.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr19_+_1249869_1249894	0.00225737	SOX4	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr8_+_24151620_24151647	0.00223498	SOX4	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr2_+_36923933_36924020	0.00222608	SOX4	ENST00000497382.1|VIT|ENSG00000205221.8|vitrin 	ENST00000404084.1|VIT|ENSG00000205221.8|vitrin 	ENST00000379241.3|VIT|ENSG00000205221.8|vitrin 	ENST00000401530.1|VIT|ENSG00000205221.8|vitrin
hg19_v2_chrX_-_128977364_128977436	0.00216305	SOX4	ENST00000371064.3|ZDHHC9|ENSG00000188706.8|zinc finger, DHHC-type containing 9
hg19_v2_chrX_-_47930980_47931034	0.00215144	SOX4	ENST00000442455.3|ZNF630|ENSG00000221994.6|zinc finger protein 630 	ENST00000428686.1|ZNF630|ENSG00000221994.6|zinc finger protein 630 	ENST00000276054.4|ZNF630|ENSG00000221994.6|zinc finger protein 630
hg19_v2_chr12_-_10251576_10251599	0.0021279	SOX4	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr18_+_7946941_7946952	0.00201228	SOX4	ENST00000444013.1|PTPRM|ENSG00000173482.12|protein tyrosine phosphatase, receptor type, M
hg19_v2_chr4_+_159690218_159690290	0.00193267	SOX4	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr5_+_140787600_140787770	0.0018822	SOX4	ENST00000520790.1|PCDHGB6|ENSG00000253305.1|protocadherin gamma subfamily B, 6
hg19_v2_chr9_-_14313641_14313666	0.00181757	SOX4	ENST00000380953.1|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr10_+_11207485_11207496	0.00171782	SOX4	ENST00000537122.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chrX_+_65384052_65384112	0.00167696	SOX4	ENST00000336279.5|HEPH|ENSG00000089472.12|hephaestin 	ENST00000458621.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr16_+_14980632_14980632	0.00158367	SOX4	ENST00000565655.1|NOMO1|ENSG00000103512.10|NODAL modulator 1
hg19_v2_chr8_+_9911778_9911880	0.00143537	SOX4	ENST00000317173.4|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A 	ENST00000441698.2|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr2_-_136594740_136594760	0.00135065	SOX4	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr10_+_24755416_24755470	0.00134171	SOX4	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr1_+_68150744_68150890	0.00119057	SOX4	ENST00000370986.4|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha 	ENST00000370985.3|GADD45A|ENSG00000116717.7|growth arrest and DNA-damage-inducible, alpha
hg19_v2_chrX_+_9880590_9880723	0.00113826	SOX4	ENST00000452575.1|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr16_+_21608525_21608543	0.00112377	SOX4	ENST00000567404.1|METTL9|ENSG00000197006.9|methyltransferase like 9
hg19_v2_chr16_-_73082274_73082274	0.000773253	SOX4	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr15_-_70390213_70390263	0.000457743	SOX4	ENST00000557997.1|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) 	ENST00000317509.8|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) 	ENST00000442299.2|TLE3|ENSG00000140332.11|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)
hg19_v2_chr13_-_24007815_24007872	0.000443801	SOX4	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr15_+_50474385_50474404	0.000304868	SOX4	ENST00000267842.5|SLC27A2|ENSG00000140284.6|solute carrier family 27 (fatty acid transporter), member 2
hg19_v2_chrX_+_69509927_69509970	0.000287025	SOX4	ENST00000374403.3|KIF4A|ENSG00000090889.10|kinesin family member 4A
hg19_v2_chr17_+_64961026_64961026	0.00025922	SOX4	ENST00000262138.3|CACNG4|ENSG00000075461.5|calcium channel, voltage-dependent, gamma subunit 4
hg19_v2_chr7_-_91794590_91794590	0.000247342	SOX4	ENST00000430130.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1 	ENST00000454089.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr5_+_162930114_162930125	0.000244222	SOX4	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
