hg19_v2_chr4_+_70916119_70916167	0.0947487	PITX2	ENST00000246896.3|HTN1|ENSG00000126550.4|histatin 1 	ENST00000511674.1|HTN1|ENSG00000126550.4|histatin 1
hg19_v2_chr3_-_49837254_49837283	0.0701225	PITX2	ENST00000412678.2|CDHR4|ENSG00000187492.4|cadherin-related family member 4 	ENST00000343366.4|CDHR4|ENSG00000187492.4|cadherin-related family member 4 	ENST00000487256.1|CDHR4|ENSG00000187492.4|cadherin-related family member 4
hg19_v2_chr9_-_98268883_98268947	0.0683446	PITX2	ENST00000551630.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000548420.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr14_+_75988851_75988903	0.0643869	PITX2	ENST00000555504.1|BATF|ENSG00000156127.6|basic leucine zipper transcription factor, ATF-like
hg19_v2_chr4_-_68620053_68620112	0.056765	PITX2	ENST00000420975.2|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor 	ENST00000226413.4|GNRHR|ENSG00000109163.6|gonadotropin-releasing hormone receptor
hg19_v2_chr16_-_12070468_12070510	0.0557973	PITX2	ENST00000538896.1|RP11-166B2.1|ENSG00000234719.4|Putative NPIP-like protein LOC729978
hg19_v2_chr7_-_128415844_128415849	0.0505267	PITX2	ENST00000249389.2|OPN1SW|ENSG00000128617.2|opsin 1 (cone pigments), short-wave-sensitive
hg19_v2_chr9_+_8858102_8858147	0.0437889	PITX2	ENST00000447950.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1	ENST00000430766.1|RP11-75C9.1|ENSG00000225706.1|RP11-75C9.1
hg19_v2_chr5_-_64920115_64920174	0.0364516	PITX2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr6_+_130339710_130339745	0.035567	PITX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr19_-_19314162_19314258	0.0340223	PITX2	ENST00000420605.3|NR2C2AP|ENSG00000184162.10|nuclear receptor 2C2-associated protein 	ENST00000544883.1|NR2C2AP|ENSG00000184162.10|nuclear receptor 2C2-associated protein 	ENST00000538165.2|NR2C2AP|ENSG00000184162.10|nuclear receptor 2C2-associated protein 	ENST00000331552.7|NR2C2AP|ENSG00000184162.10|nuclear receptor 2C2-associated protein
hg19_v2_chr17_+_4643300_4643329	0.0338729	PITX2	ENST00000433935.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr17_+_4643337_4643345	0.0336364	PITX2	ENST00000592813.1|ZMYND15|ENSG00000141497.9|zinc finger, MYND-type containing 15
hg19_v2_chr2_-_65659762_65659774	0.0327754	PITX2	ENST00000440972.1|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chrM_+_9207_9255	0.0321263	PITX2	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr3_+_139062838_139062881	0.031995	PITX2	ENST00000310776.4|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465056.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465373.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22
hg19_v2_chr1_-_31230650_31230683	0.0318302	PITX2	ENST00000294507.3|LAPTM5|ENSG00000162511.7|lysosomal protein transmembrane 5
hg19_v2_chr1_+_205538165_205538193	0.0294079	PITX2	ENST00000536357.1|MFSD4|ENSG00000174514.8|major facilitator superfamily domain containing 4
hg19_v2_chrX_-_48931648_48931730	0.0280846	PITX2	ENST00000376386.3|PRAF2|ENSG00000243279.2|PRA1 domain family, member 2 	ENST00000376390.4|PRAF2|ENSG00000243279.2|PRA1 domain family, member 2
hg19_v2_chr11_-_75017734_75017755	0.027422	PITX2	ENST00000532525.1|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr22_-_39096661_39096681	0.0265658	PITX2	ENST00000216039.5|JOSD1|ENSG00000100221.6|Josephin domain containing 1
hg19_v2_chr1_-_165414414_165414433	0.0265367	PITX2	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chr15_+_41221536_41221591	0.0250314	PITX2	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr6_-_53013620_53013644	0.0242751	PITX2	ENST00000259803.7|GCM1|ENSG00000137270.10|glial cells missing homolog 1 (Drosophila)
hg19_v2_chr9_-_127358087_127358170	0.0218762	PITX2	ENST00000475178.1|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr9_-_8857776_8857878	0.0212762	PITX2	ENST00000481079.1|PTPRD|ENSG00000153707.11|protein tyrosine phosphatase, receptor type, D
hg19_v2_chr3_+_158787098_158787117	0.0211252	PITX2	ENST00000397832.2|IQCJ|ENSG00000214216.6|IQ motif containing J 	ENST00000451172.1|IQCJ|ENSG00000214216.6|IQ motif containing J 	ENST00000482126.1|IQCJ|ENSG00000214216.6|IQ motif containing J
hg19_v2_chr12_+_7941989_7942014	0.0201671	PITX2	ENST00000229307.4|NANOG|ENSG00000111704.6|Nanog homeobox
hg19_v2_chrX_-_33357558_33357588	0.0185396	PITX2	ENST00000288447.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr11_-_36619771_36619793	0.0174316	PITX2	ENST00000311485.3|RAG2|ENSG00000175097.3|recombination activating gene 2 	ENST00000527033.1|RAG2|ENSG00000175097.3|recombination activating gene 2 	ENST00000532616.1|RAG2|ENSG00000175097.3|recombination activating gene 2
hg19_v2_chr17_-_40021656_40021684	0.0161795	PITX2	ENST00000319121.3|KLHL11|ENSG00000178502.5|kelch-like family member 11
hg19_v2_chrX_+_107069063_107069123	0.0158459	PITX2	ENST00000262843.6|MID2|ENSG00000080561.9|midline 2
hg19_v2_chr18_-_47017956_47018210	0.0151809	PITX2	ENST00000584895.1|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000332968.6|RPL17-C18orf32|ENSG00000215472.5|RPL17-C18orf32 readthrough 	ENST00000580210.1|RPL17|ENSG00000265681.2|ribosomal protein L17 	ENST00000579408.1|RPL17|ENSG00000265681.2|ribosomal protein L17
hg19_v2_chr4_-_36245561_36245601	0.0140385	PITX2	ENST00000506189.1|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr13_-_36429763_36429779	0.0118904	PITX2	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr9_+_34458771_34458850	0.0118515	PITX2	ENST00000437363.1|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1 	ENST00000242317.4|DNAI1|ENSG00000122735.11|dynein, axonemal, intermediate chain 1
hg19_v2_chr4_-_76912070_76912118	0.0118449	PITX2	ENST00000395711.4|SDAD1|ENSG00000198301.7|SDA1 domain containing 1 	ENST00000356260.5|SDAD1|ENSG00000198301.7|SDA1 domain containing 1
hg19_v2_chr11_-_119217365_119217398	0.0116487	PITX2	ENST00000360167.4|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000445041.2|C1QTNF5|ENSG00000223953.3|C1q and tumor necrosis factor related protein 5 	ENST00000555262.1|MFRP|ENSG00000235718.3|membrane frizzled-related protein 	ENST00000449574.2|MFRP|ENSG00000235718.3|membrane frizzled-related protein
hg19_v2_chr17_-_46657473_46657473	0.0116435	PITX2	ENST00000332503.5|HOXB4|ENSG00000182742.5|homeobox B4
hg19_v2_chr19_+_2476116_2476146	0.0115026	PITX2	ENST00000215631.4|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta 	ENST00000587345.1|GADD45B|ENSG00000099860.4|growth arrest and DNA-damage-inducible, beta
hg19_v2_chr3_+_158787041_158787074	0.0112405	PITX2	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr17_-_4643161_4643241	0.0109042	PITX2	ENST00000574412.1|CXCL16|ENSG00000161921.10|chemokine (C-X-C motif) ligand 16
hg19_v2_chr6_-_160209471_160209622	0.0108488	PITX2	ENST00000539948.1|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chr11_+_61522844_61522875	0.0107025	PITX2	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr9_-_110251836_110251927	0.0103595	PITX2	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr16_-_5116025_5116111	0.00997259	PITX2	ENST00000472572.3|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000315997.5|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000422873.1|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89 	ENST00000350219.4|C16orf89|ENSG00000153446.11|chromosome 16 open reading frame 89
hg19_v2_chr11_-_5248294_5248308	0.0099474	PITX2	ENST00000335295.4|HBB|ENSG00000244734.2|hemoglobin, beta
hg19_v2_chr12_+_40787194_40787197	0.00840374	PITX2	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr2_+_3622893_3622925	0.00773736	PITX2	ENST00000407445.3|RPS7|ENSG00000171863.8|ribosomal protein S7 	ENST00000403564.1|RPS7|ENSG00000171863.8|ribosomal protein S7
hg19_v2_chr10_-_61900762_61900779	0.00735148	PITX2	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr10_-_49482907_49482941	0.00687722	PITX2	ENST00000374201.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2 	ENST00000407470.4|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr13_-_95131923_95131944	0.00650332	PITX2	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr17_+_79495397_79495558	0.0060193	PITX2	ENST00000417245.2|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 	ENST00000334850.7|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
hg19_v2_chr13_+_73632897_73632930	0.00564614	PITX2	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr1_+_201979645_201979721	0.0049398	PITX2	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr18_-_3880051_3880135	0.00368478	PITX2	ENST00000584874.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr2_+_201994569_201994589	0.00290693	PITX2	ENST00000457277.1|CFLAR|ENSG00000003402.15|CASP8 and FADD-like apoptosis regulator
hg19_v2_chr7_-_122840015_122840040	0.00280057	PITX2	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr16_+_58010339_58010459	0.00206858	PITX2	ENST00000290871.5|TEPP|ENSG00000159648.7|testis, prostate and placenta expressed 	ENST00000441824.2|TEPP|ENSG00000159648.7|testis, prostate and placenta expressed
hg19_v2_chr8_-_10512569_10512612	0.00200546	PITX2	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr3_-_69249863_69250049	0.00186768	PITX2	ENST00000478263.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B 	ENST00000462512.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
