hg19_v2_chr12_-_92821922_92821924	1.07984	PAX8	ENST00000538965.1|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand 	ENST00000378487.2|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand
hg19_v2_chr1_-_153013588_153013605	1.06428	PAX8	ENST00000360379.3|SPRR2D|ENSG00000163216.6|small proline-rich protein 2D
hg19_v2_chrX_-_153141783_153141846	0.7721	PAX8	ENST00000458029.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr12_+_72058130_72058261	0.637611	PAX8	ENST00000547843.1|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr2_-_37068530_37068530	0.624153	PAX8	ENST00000593798.1|AC007382.1|ENSG00000268688.1|Uncharacterized protein
hg19_v2_chr11_-_105010320_105010516	0.434729	PAX8	ENST00000532895.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18 	ENST00000530950.1|CARD18|ENSG00000255501.1|caspase recruitment domain family, member 18
hg19_v2_chr6_+_8652370_8652515	0.432458	PAX8	ENST00000503668.1|HULC|ENSG00000251164.1|hepatocellular carcinoma up-regulated long non-coding RNA
hg19_v2_chr10_+_12391685_12391734	0.419494	PAX8	ENST00000378845.1|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr14_-_57197224_57197273	0.384044	PAX8	ENST00000554597.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein  	ENST00000556696.1|RP11-1085N6.3|ENSG00000259133.1|Uncharacterized protein
hg19_v2_chr1_+_218683438_218683438	0.372044	PAX8	ENST00000443836.1|C1orf143|ENSG00000228208.2|chromosome 1 open reading frame 143
hg19_v2_chr12_+_7167980_7168040	0.367966	PAX8	ENST00000360817.5|C1S|ENSG00000182326.10|complement component 1, s subcomponent 	ENST00000402681.3|C1S|ENSG00000182326.10|complement component 1, s subcomponent
hg19_v2_chr3_-_110612323_110612323	0.335122	PAX8	ENST00000383686.2|RP11-553A10.1|ENSG00000206532.2|Uncharacterized protein
hg19_v2_chrX_-_84363974_84364054	0.324591	PAX8	ENST00000395409.3|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1 	ENST00000332921.5|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1 	ENST00000509231.1|SATL1|ENSG00000184788.8|spermidine/spermine N1-acetyl transferase-like 1
hg19_v2_chr10_+_135340859_135341001	0.317389	PAX8	ENST00000252945.3|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000421586.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1 	ENST00000418356.1|CYP2E1|ENSG00000130649.5|cytochrome P450, family 2, subfamily E, polypeptide 1
hg19_v2_chr9_-_117853297_117853426	0.304236	PAX8	ENST00000542877.1|TNC|ENSG00000041982.10|tenascin C 	ENST00000537320.1|TNC|ENSG00000041982.10|tenascin C 	ENST00000341037.4|TNC|ENSG00000041982.10|tenascin C
hg19_v2_chr6_-_6711235_6711379	0.292495	PAX8	ENST00000432823.2|RP1-80N2.2|ENSG00000226281.2|RP1-80N2.2
hg19_v2_chr4_+_123653882_123653965	0.285602	PAX8	ENST00000433287.1|BBS12|ENSG00000181004.5|Bardet-Biedl syndrome 12
hg19_v2_chr1_-_52520828_52520888	0.28327	PAX8	ENST00000610127.1|TXNDC12|ENSG00000117862.7|thioredoxin domain containing 12 (endoplasmic reticulum)
hg19_v2_chr17_-_73267214_73267277	0.281176	PAX8	ENST00000580717.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000577542.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000579612.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000245551.5|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr22_-_44258280_44258336	0.2808	PAX8	ENST00000540422.1|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr11_-_9482010_9482185	0.264399	PAX8	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr17_+_7462103_7462110	0.261618	PAX8	ENST00000396545.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr6_+_24126350_24126497	0.255998	PAX8	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr17_-_73267304_73267328	0.245606	PAX8	ENST00000579297.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000580571.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr17_-_73267281_73267299	0.238859	PAX8	ENST00000578305.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000325102.8|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chr6_-_44233361_44233500	0.237076	PAX8	ENST00000275015.5|NFKBIE|ENSG00000146232.10|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
hg19_v2_chr19_+_34891252_34891252	0.236273	PAX8	ENST00000606020.1|RP11-618P17.4|ENSG00000266953.2|Uncharacterized protein
hg19_v2_chr1_-_119682812_119682947	0.233527	PAX8	ENST00000537870.1|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr17_+_7461613_7461645	0.229082	PAX8	ENST00000438470.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000436057.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr19_+_35417939_35417963	0.226469	PAX8	ENST00000601142.1|ZNF30|ENSG00000168661.10|zinc finger protein 30 	ENST00000426813.2|ZNF30|ENSG00000168661.10|zinc finger protein 30
hg19_v2_chr19_+_42041860_42041936	0.222317	PAX8	ENST00000483481.2|AC006129.4|ENSG00000270164.1|AC006129.4	ENST00000494375.2|AC006129.4|ENSG00000270164.1|AC006129.4
hg19_v2_chr19_-_55791563_55791749	0.214267	PAX8	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr17_+_7461580_7461610	0.214021	PAX8	ENST00000483039.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13 	ENST00000396542.1|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr12_-_123201337_123201439	0.209828	PAX8	ENST00000528880.2|HCAR3|ENSG00000255398.2|hydroxycarboxylic acid receptor 3
hg19_v2_chr11_-_102401469_102401488	0.209584	PAX8	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr2_-_106013207_106013242	0.204481	PAX8	ENST00000447958.1|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr20_-_36794938_36794980	0.197122	PAX8	ENST00000453095.1|TGM2|ENSG00000198959.7|transglutaminase 2
hg19_v2_chr13_-_24471194_24471194	0.195878	PAX8	ENST00000382137.3|C1QTNF9B|ENSG00000205863.5|C1q and tumor necrosis factor related protein 9B 	ENST00000382057.3|C1QTNF9B|ENSG00000205863.5|C1q and tumor necrosis factor related protein 9B
hg19_v2_chr19_+_782755_782833	0.192134	PAX8	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr12_-_86650077_86650095	0.188076	PAX8	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr15_+_67420441_67420606	0.186004	PAX8	ENST00000558894.1|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr6_+_43739697_43739752	0.185029	PAX8	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr6_-_134639180_134639220	0.184942	PAX8	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr21_-_44582378_44582401	0.181921	PAX8	ENST00000433840.1|AP001631.10|ENSG00000228120.2|AP001631.10
hg19_v2_chr13_+_31309645_31309726	0.177573	PAX8	ENST00000380490.3|ALOX5AP|ENSG00000132965.5|arachidonate 5-lipoxygenase-activating protein
hg19_v2_chr1_-_182573514_182573543	0.174633	PAX8	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr7_+_129984630_129984701	0.173967	PAX8	ENST00000355388.3|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000497503.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000463587.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000461828.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000494311.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000466363.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000485477.1|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000431780.2|CPA5|ENSG00000158525.11|carboxypeptidase A5 	ENST00000474905.1|CPA5|ENSG00000158525.11|carboxypeptidase A5
hg19_v2_chr14_+_75230011_75230120	0.166837	PAX8	ENST00000552421.1|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000325680.7|YLPM1|ENSG00000119596.13|YLP motif containing 1 	ENST00000238571.3|YLPM1|ENSG00000119596.13|YLP motif containing 1
hg19_v2_chr11_-_2170786_2170833	0.165699	PAX8	ENST00000300632.5|IGF2|ENSG00000167244.13|insulin-like growth factor 2 (somatomedin A)
hg19_v2_chr11_+_59705928_59705928	0.164807	PAX8	ENST00000398992.1|OOSP1|ENSG00000214788.1|oocyte secreted protein 1
hg19_v2_chr8_-_121825088_121825094	0.164576	PAX8	ENST00000520717.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr6_+_161123270_161123278	0.162721	PAX8	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr8_+_86851932_86851934	0.160549	PAX8	ENST00000517368.1|CTA-392E5.1|ENSG00000253154.1|CTA-392E5.1
hg19_v2_chr4_+_123653807_123653869	0.155533	PAX8	ENST00000314218.3|BBS12|ENSG00000181004.5|Bardet-Biedl syndrome 12 	ENST00000542236.1|BBS12|ENSG00000181004.5|Bardet-Biedl syndrome 12
hg19_v2_chr10_+_103912137_103912172	0.154859	PAX8	ENST00000603742.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000488254.2|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000461421.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000476468.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000370007.5|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1
hg19_v2_chr3_+_190105909_190105966	0.154824	PAX8	ENST00000456423.1|CLDN16|ENSG00000113946.3|claudin 16
hg19_v2_chr12_-_123187890_123187911	0.153667	PAX8	ENST00000328880.5|HCAR2|ENSG00000182782.7|hydroxycarboxylic acid receptor 2
hg19_v2_chr6_+_14117872_14118012	0.148479	PAX8	ENST00000379153.3|CD83|ENSG00000112149.5|CD83 molecule
hg19_v2_chr11_+_82904746_82904832	0.147398	PAX8	ENST00000393389.3|ANKRD42|ENSG00000137494.9|ankyrin repeat domain 42 	ENST00000528722.1|ANKRD42|ENSG00000137494.9|ankyrin repeat domain 42
hg19_v2_chr3_-_161090660_161090673	0.147136	PAX8	ENST00000359175.4|SPTSSB|ENSG00000196542.4|serine palmitoyltransferase, small subunit B
hg19_v2_chr2_+_185463093_185463181	0.147065	PAX8	ENST00000302277.6|ZNF804A|ENSG00000170396.6|zinc finger protein 804A
hg19_v2_chr1_+_41448820_41448833	0.145464	PAX8	ENST00000372616.1|CTPS1|ENSG00000171793.9|CTP synthase 1
hg19_v2_chr9_+_42704004_42704004	0.144901	PAX8	ENST00000457288.1|CBWD7|ENSG00000215126.6|COBW domain containing 7
hg19_v2_chrX_+_129535937_129535994	0.144091	PAX8	ENST00000305536.6|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2 	ENST00000370947.1|RBMX2|ENSG00000134597.9|RNA binding motif protein, X-linked 2
hg19_v2_chr15_-_89010607_89010650	0.141612	PAX8	ENST00000312475.4|MRPL46|ENSG00000259494.1|mitochondrial ribosomal protein L46
hg19_v2_chr6_+_135502408_135502459	0.140763	PAX8	ENST00000341911.5|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000442647.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000316528.8|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr11_-_47870091_47870121	0.139304	PAX8	ENST00000526870.1|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr17_-_72588422_72588422	0.139029	PAX8	ENST00000375352.1|CD300LD|ENSG00000204345.1|CD300 molecule-like family member d
hg19_v2_chr12_-_56236690_56236706	0.136309	PAX8	ENST00000322569.4|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chr17_-_34257731_34257766	0.134431	PAX8	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr22_-_31324215_31324215	0.133501	PAX8	ENST00000429468.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr17_-_73266616_73266702	0.133039	PAX8	ENST00000579194.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing 	ENST00000581777.1|MIF4GD|ENSG00000125457.9|MIF4G domain containing
hg19_v2_chrM_+_4431_4475	0.130389	PAX8	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chr1_+_186649754_186649787	0.130108	PAX8	ENST00000608917.1|RP5-973M2.2|ENSG00000273129.1|RP5-973M2.2
hg19_v2_chr7_+_6713376_6713424	0.127223	PAX8	ENST00000399484.3|AC073343.1|ENSG00000198580.6|Uncharacterized protein  	ENST00000544825.1|AC073343.1|ENSG00000198580.6|Uncharacterized protein  	ENST00000401847.1|AC073343.1|ENSG00000198580.6|Uncharacterized protein
hg19_v2_chr7_-_76255444_76255444	0.124269	PAX8	ENST00000454397.1|POMZP3|ENSG00000146707.10|POM121 and ZP3 fusion
hg19_v2_chr1_+_100817262_100817290	0.122352	PAX8	ENST00000455467.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr1_+_207038699_207038699	0.121582	PAX8	ENST00000367098.1|IL20|ENSG00000162891.6|interleukin 20
hg19_v2_chr19_+_42301079_42301090	0.121325	PAX8	ENST00000596544.1|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr17_+_6918093_6918139	0.12075	PAX8	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr5_-_176943917_176943943	0.120614	PAX8	ENST00000330503.7|DDX41|ENSG00000183258.7|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
hg19_v2_chr4_-_144826682_144826716	0.119451	PAX8	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr8_+_31496809_31496902	0.117956	PAX8	ENST00000518104.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000519301.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr11_-_62609281_62609282	0.117909	PAX8	ENST00000525239.1|WDR74|ENSG00000133316.11|WD repeat domain 74 	ENST00000538098.2|WDR74|ENSG00000133316.11|WD repeat domain 74
hg19_v2_chr8_-_66474884_66475015	0.114745	PAX8	ENST00000520902.1|CTD-3025N20.2|ENSG00000254081.1|CTD-3025N20.2
hg19_v2_chr7_-_144533074_144533153	0.114088	PAX8	ENST00000360057.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1 	ENST00000378099.3|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr1_-_186649543_186649563	0.113101	PAX8	ENST00000367468.5|PTGS2|ENSG00000073756.7|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr17_-_39216344_39216368	0.11242	PAX8	ENST00000391418.2|KRTAP2-3|ENSG00000212724.2|keratin associated protein 2-3
hg19_v2_chr19_-_51538148_51538203	0.111223	PAX8	ENST00000319590.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12 	ENST00000250351.4|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr12_-_56236734_56236788	0.109749	PAX8	ENST00000548629.1|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chr14_-_75083313_75083360	0.109265	PAX8	ENST00000556652.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2	ENST00000555313.1|CTD-2207P18.2|ENSG00000258976.1|CTD-2207P18.2
hg19_v2_chr17_-_1508379_1508458	0.107645	PAX8	ENST00000412517.3|SLC43A2|ENSG00000167703.10|solute carrier family 43 (amino acid system L transporter), member 2
hg19_v2_chr2_+_90248739_90248739	0.107283	PAX8	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr19_+_18794470_18794512	0.106809	PAX8	ENST00000321949.8|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1 	ENST00000338797.6|CRTC1|ENSG00000105662.11|CREB regulated transcription coactivator 1
hg19_v2_chr11_-_58343319_58343338	0.105923	PAX8	ENST00000395074.2|LPXN|ENSG00000110031.8|leupaxin
hg19_v2_chr14_-_91710852_91710893	0.103892	PAX8	ENST00000535815.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68 	ENST00000529102.1|GPR68|ENSG00000119714.6|G protein-coupled receptor 68
hg19_v2_chr7_+_149535455_149535555	0.103686	PAX8	ENST00000223210.4|ZNF862|ENSG00000106479.6|zinc finger protein 862 	ENST00000460379.1|ZNF862|ENSG00000106479.6|zinc finger protein 862
hg19_v2_chr5_+_69321074_69321200	0.102449	PAX8	ENST00000380751.5|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000380750.3|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000503931.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric) 	ENST00000506542.1|SERF1B|ENSG00000205572.5|small EDRK-rich factor 1B (centromeric)
hg19_v2_chr19_-_52254050_52254070	0.100072	PAX8	ENST00000600815.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr20_+_4152356_4152363	0.0996241	PAX8	ENST00000379460.2|SMOX|ENSG00000088826.13|spermine oxidase
hg19_v2_chr16_-_31519691_31519734	0.0981674	PAX8	ENST00000567994.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000430477.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000570164.1|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58 	ENST00000327237.2|C16orf58|ENSG00000140688.12|chromosome 16 open reading frame 58
hg19_v2_chr17_-_73781567_73781629	0.0969602	PAX8	ENST00000586607.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr22_+_38082330_38082381	0.0953502	PAX8	ENST00000359114.4|NOL12|ENSG00000100101.13|nucleolar protein 12
hg19_v2_chr17_+_9745786_9745816	0.0943253	PAX8	ENST00000304773.5|GLP2R|ENSG00000065325.8|glucagon-like peptide 2 receptor
hg19_v2_chr17_+_7461849_7461914	0.0939625	PAX8	ENST00000338784.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr11_-_74022658_74022704	0.0938491	PAX8	ENST00000427714.2|P4HA3|ENSG00000149380.7|prolyl 4-hydroxylase, alpha polypeptide III 	ENST00000331597.4|P4HA3|ENSG00000149380.7|prolyl 4-hydroxylase, alpha polypeptide III
hg19_v2_chr4_+_123747834_123747863	0.0933347	PAX8	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr21_-_27462351_27462377	0.0929277	PAX8	ENST00000448850.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr1_-_71513471_71513506	0.0919579	PAX8	ENST00000370931.3|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000356595.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000306666.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370932.2|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000351052.5|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000414819.1|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3) 	ENST00000370924.4|PTGER3|ENSG00000050628.16|prostaglandin E receptor 3 (subtype EP3)
hg19_v2_chr19_+_40476912_40476939	0.0904184	PAX8	ENST00000157812.2|PSMC4|ENSG00000013275.3|proteasome (prosome, macropain) 26S subunit, ATPase, 4
hg19_v2_chr14_+_66578299_66578354	0.0898836	PAX8	ENST00000554187.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000556662.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000556291.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000557723.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1	ENST00000557050.1|RP11-783L4.1|ENSG00000258502.1|RP11-783L4.1
hg19_v2_chr19_-_6057282_6057313	0.0897321	PAX8	ENST00000592281.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression)
hg19_v2_chrY_-_20935572_20935621	0.0886157	PAX8	ENST00000382852.1|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000344884.4|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2 	ENST00000304790.3|HSFY2|ENSG00000169953.11|heat shock transcription factor, Y linked 2
hg19_v2_chr19_+_42300548_42300559	0.0864366	PAX8	ENST00000344550.4|CEACAM3|ENSG00000170956.12|carcinoembryonic antigen-related cell adhesion molecule 3
hg19_v2_chr14_-_54425475_54425500	0.085755	PAX8	ENST00000559642.1|BMP4|ENSG00000125378.11|bone morphogenetic protein 4
hg19_v2_chr6_+_30844192_30844221	0.0852423	PAX8	ENST00000502955.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000505066.1|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr6_+_160542870_160542968	0.0852268	PAX8	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr12_-_6960407_6960464	0.0849427	PAX8	ENST00000540683.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000229265.6|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000535406.1|CDCA3|ENSG00000111665.7|cell division cycle associated 3 	ENST00000422785.3|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr19_-_51537982_51537997	0.0843717	PAX8	ENST00000525263.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr3_-_127842612_127842680	0.0839899	PAX8	ENST00000417360.1|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1 	ENST00000322623.5|RUVBL1|ENSG00000175792.7|RuvB-like AAA ATPase 1
hg19_v2_chr12_+_53689309_53689366	0.0829614	PAX8	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr3_-_15540055_15540120	0.0828468	PAX8	ENST00000605797.1|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase 	ENST00000435459.2|COLQ|ENSG00000206561.8|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
hg19_v2_chr8_+_27168988_27169021	0.0827598	PAX8	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr7_+_95115210_95115217	0.0825001	PAX8	ENST00000428113.1|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4 	ENST00000325885.5|ASB4|ENSG00000005981.8|ankyrin repeat and SOCS box containing 4
hg19_v2_chr11_+_117857063_117857121	0.0824765	PAX8	ENST00000227752.3|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000541785.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha 	ENST00000545409.1|IL10RA|ENSG00000110324.5|interleukin 10 receptor, alpha
hg19_v2_chr11_-_129062093_129062184	0.0822582	PAX8	ENST00000310343.9|ARHGAP32|ENSG00000134909.14|Rho GTPase activating protein 32
hg19_v2_chr3_-_110612059_110612059	0.0818842	PAX8	ENST00000485473.1|RP11-553A10.1|ENSG00000206532.2|Uncharacterized protein
hg19_v2_chr8_-_7220490_7220490	0.0813819	PAX8	ENST00000400078.2|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr4_+_36283213_36283256	0.0802262	PAX8	ENST00000357504.3|DTHD1|ENSG00000197057.4|death domain containing 1
hg19_v2_chr7_+_75677354_75677459	0.0793723	PAX8	ENST00000461263.2|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000315758.5|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial) 	ENST00000443006.1|MDH2|ENSG00000146701.7|malate dehydrogenase 2, NAD (mitochondrial)
hg19_v2_chr12_+_57828521_57828543	0.0792772	PAX8	ENST00000309668.2|INHBC|ENSG00000175189.3|inhibin, beta C
hg19_v2_chr12_-_56236711_56236730	0.0792574	PAX8	ENST00000409200.3|MMP19|ENSG00000123342.11|matrix metallopeptidase 19
hg19_v2_chrY_+_20708557_20708606	0.0782832	PAX8	ENST00000307393.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000309834.4|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1 	ENST00000382856.2|HSFY1|ENSG00000172468.9|heat shock transcription factor, Y-linked 1
hg19_v2_chr13_+_76362974_76363015	0.0781437	PAX8	ENST00000497947.2|LMO7|ENSG00000136153.15|LIM domain 7
hg19_v2_chr11_-_47870019_47870033	0.0777783	PAX8	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr1_-_119683251_119683298	0.0768614	PAX8	ENST00000369426.5|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial 	ENST00000235521.4|WARS2|ENSG00000116874.7|tryptophanyl tRNA synthetase 2, mitochondrial
hg19_v2_chr3_-_107941209_107941227	0.0767597	PAX8	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr15_-_60683326_60683496	0.0764982	PAX8	ENST00000559350.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000558986.1|ANXA2|ENSG00000182718.12|annexin A2 	ENST00000560389.1|ANXA2|ENSG00000182718.12|annexin A2
hg19_v2_chr4_-_23735183_23735202	0.0762661	PAX8	ENST00000507666.1|RP11-380P13.2|ENSG00000251292.1|RP11-380P13.2
hg19_v2_chr19_-_37701386_37701453	0.0754129	PAX8	ENST00000527838.1|ZNF585B|ENSG00000245680.5|zinc finger protein 585B 	ENST00000591492.1|ZNF585B|ENSG00000245680.5|zinc finger protein 585B 	ENST00000532828.2|ZNF585B|ENSG00000245680.5|zinc finger protein 585B
hg19_v2_chr17_+_38444115_38444194	0.0750794	PAX8	ENST00000580824.1|CDC6|ENSG00000094804.5|cell division cycle 6 	ENST00000577249.1|CDC6|ENSG00000094804.5|cell division cycle 6
hg19_v2_chr11_-_18063973_18063973	0.0749118	PAX8	ENST00000528338.1|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr19_-_55791540_55791549	0.0742001	PAX8	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr1_-_25256368_25256476	0.0739343	PAX8	ENST00000308873.6|RUNX3|ENSG00000020633.14|runt-related transcription factor 3
hg19_v2_chr4_+_71600144_71600159	0.0728902	PAX8	ENST00000502653.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr16_+_66413128_66413184	0.0716507	PAX8	ENST00000563425.2|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr16_-_87350970_87351006	0.0712454	PAX8	ENST00000567970.1|C16orf95|ENSG00000260456.2|chromosome 16 open reading frame 95
hg19_v2_chr19_+_9938562_9938627	0.0703011	PAX8	ENST00000586895.1|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000358666.3|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000590068.1|UBL5|ENSG00000198258.6|ubiquitin-like 5 	ENST00000593087.1|UBL5|ENSG00000198258.6|ubiquitin-like 5
hg19_v2_chr17_-_8301132_8301150	0.0699644	PAX8	ENST00000399398.2|RNF222|ENSG00000189051.5|ring finger protein 222
hg19_v2_chr19_-_44860820_44860843	0.0696146	PAX8	ENST00000354340.4|ZNF112|ENSG00000062370.12|zinc finger protein 112 	ENST00000337401.4|ZNF112|ENSG00000062370.12|zinc finger protein 112 	ENST00000587909.1|ZNF112|ENSG00000062370.12|zinc finger protein 112
hg19_v2_chr9_-_92020841_92020885	0.0693837	PAX8	ENST00000433650.1|SEMA4D|ENSG00000187764.7|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
hg19_v2_chr4_+_75230853_75230871	0.0679299	PAX8	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr6_+_135502466_135502489	0.066028	PAX8	ENST00000367814.4|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr4_+_119809984_119810024	0.0635115	PAX8	ENST00000307142.4|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000448416.2|SYNPO2|ENSG00000172403.6|synaptopodin 2 	ENST00000429713.2|SYNPO2|ENSG00000172403.6|synaptopodin 2
hg19_v2_chr7_-_47520869_47520899	0.0634413	PAX8	ENST00000415929.1|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr19_+_41856816_41856871	0.0615712	PAX8	ENST00000539627.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr15_+_45021183_45021189	0.0615138	PAX8	ENST00000559390.1|TRIM69|ENSG00000185880.8|tripartite motif containing 69
hg19_v2_chr9_+_118950325_118950452	0.0609137	PAX8	ENST00000534838.1|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr11_+_60609537_60609567	0.0608175	PAX8	ENST00000227520.5|CCDC86|ENSG00000110104.7|coiled-coil domain containing 86
hg19_v2_chr17_-_67057047_67057094	0.0599833	PAX8	ENST00000495634.1|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9 	ENST00000453985.2|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9 	ENST00000585714.1|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr6_+_135502501_135502652	0.0595052	PAX8	ENST00000527615.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000420123.2|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000525369.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000528774.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534121.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000534044.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog 	ENST00000533624.1|MYB|ENSG00000118513.14|v-myb avian myeloblastosis viral oncogene homolog
hg19_v2_chr12_-_129308487_129308588	0.0587611	PAX8	ENST00000266771.5|SLC15A4|ENSG00000139370.6|solute carrier family 15 (oligopeptide transporter), member 4
hg19_v2_chr6_+_36853607_36853640	0.0586659	PAX8	ENST00000480824.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000355190.3|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000373685.1|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89
hg19_v2_chr13_-_103426112_103426164	0.0577354	PAX8	ENST00000376032.4|TEX30|ENSG00000151287.12|testis expressed 30 	ENST00000376029.3|TEX30|ENSG00000151287.12|testis expressed 30
hg19_v2_chr16_-_30773372_30773449	0.057379	PAX8	ENST00000545825.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93 	ENST00000541260.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93
hg19_v2_chr1_-_8585945_8586056	0.0568973	PAX8	ENST00000377464.1|RERE|ENSG00000142599.13|arginine-glutamic acid dipeptide (RE) repeats
hg19_v2_chr11_+_9482512_9482534	0.0567091	PAX8	ENST00000396602.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000530463.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000533542.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000532577.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000396597.3|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr3_-_112329110_112329127	0.0561966	PAX8	ENST00000479368.1|CCDC80|ENSG00000091986.11|coiled-coil domain containing 80
hg19_v2_chr5_+_140027355_140027476	0.056144	PAX8	ENST00000417647.2|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II 	ENST00000507593.1|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II 	ENST00000508301.1|IK|ENSG00000113141.11|IK cytokine, down-regulator of HLA II
hg19_v2_chr5_-_133510456_133510499	0.0551362	PAX8	ENST00000520417.1|SKP1|ENSG00000113558.14|S-phase kinase-associated protein 1
hg19_v2_chr13_-_25746416_25746433	0.0547528	PAX8	ENST00000515384.1|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2 	ENST00000357816.2|AMER2|ENSG00000165566.11|APC membrane recruitment protein 2
hg19_v2_chr11_-_8816375_8816402	0.0544912	PAX8	ENST00000530580.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr17_-_27278304_27278408	0.0542958	PAX8	ENST00000577226.1|PHF12|ENSG00000109118.9|PHD finger protein 12
hg19_v2_chr10_+_24738355_24738380	0.0537594	PAX8	ENST00000307544.6|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr2_-_132589601_132589606	0.0535113	PAX8	ENST00000437330.1|AC103564.7|ENSG00000229203.1|AC103564.7
hg19_v2_chr1_+_180165672_180165817	0.0531645	PAX8	ENST00000443059.1|QSOX1|ENSG00000116260.12|quiescin Q6 sulfhydryl oxidase 1
hg19_v2_chr9_+_27109392_27109435	0.0526572	PAX8	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr17_+_7461781_7461820	0.0522129	PAX8	ENST00000349228.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chrX_-_153141302_153141399	0.0512231	PAX8	ENST00000361699.4|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000543994.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000370057.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000538883.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000361981.3|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chr3_+_150264458_150264481	0.0509656	PAX8	ENST00000487799.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000460851.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr11_+_20044375_20044414	0.0509093	PAX8	ENST00000525322.1|NAV2|ENSG00000166833.15|neuron navigator 2 	ENST00000530408.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr8_-_53322303_53322340	0.050085	PAX8	ENST00000276480.7|ST18|ENSG00000147488.7|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v2_chr19_+_16296191_16296266	0.0500547	PAX8	ENST00000589852.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000263384.7|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000588367.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A 	ENST00000587351.1|FAM32A|ENSG00000105058.7|family with sequence similarity 32, member A
hg19_v2_chr4_-_16077741_16077760	0.0499257	PAX8	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr12_+_122516626_122516645	0.0498996	PAX8	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr6_-_31628512_31628566	0.0492666	PAX8	ENST00000375911.1|C6orf47|ENSG00000204439.3|chromosome 6 open reading frame 47
hg19_v2_chr18_-_29264467_29264551	0.0491818	PAX8	ENST00000383131.3|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 	ENST00000237019.7|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr20_-_5931109_5931212	0.0491429	PAX8	ENST00000203001.2|TRMT6|ENSG00000089195.10|tRNA methyltransferase 6 homolog (S. cerevisiae)
hg19_v2_chr5_+_140235469_140235634	0.0487665	PAX8	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr17_-_33760269_33760302	0.0469924	PAX8	ENST00000452764.3|SLFN12|ENSG00000172123.8|schlafen family member 12
hg19_v2_chr10_-_5638048_5638094	0.0469699	PAX8	ENST00000478294.1|RP13-463N16.6|ENSG00000242147.1|RP13-463N16.6
hg19_v2_chr13_-_95131923_95131944	0.0461901	PAX8	ENST00000377028.5|DCT|ENSG00000080166.11|dopachrome tautomerase 	ENST00000446125.1|DCT|ENSG00000080166.11|dopachrome tautomerase
hg19_v2_chr8_-_53322347_53322378	0.0452972	PAX8	ENST00000517580.1|ST18|ENSG00000147488.7|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)
hg19_v2_chr12_-_10251603_10251619	0.0444887	PAX8	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr19_+_29097595_29097640	0.0441464	PAX8	ENST00000587961.1|AC079466.1|ENSG00000266976.1|AC079466.1
hg19_v2_chr4_-_10686475_10686490	0.0432192	PAX8	ENST00000226951.6|CLNK|ENSG00000109684.10|cytokine-dependent hematopoietic cell linker
hg19_v2_chr3_-_8811288_8811314	0.0426353	PAX8	ENST00000316793.3|OXTR|ENSG00000180914.6|oxytocin receptor 	ENST00000431493.1|OXTR|ENSG00000180914.6|oxytocin receptor
hg19_v2_chr19_-_51538118_51538134	0.042625	PAX8	ENST00000529888.1|KLK12|ENSG00000186474.11|kallikrein-related peptidase 12
hg19_v2_chr15_+_34638066_34638129	0.0425686	PAX8	ENST00000333756.4|NUTM1|ENSG00000184507.11|NUT midline carcinoma, family member 1
hg19_v2_chr2_-_175712479_175712503	0.041496	PAX8	ENST00000443238.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr15_+_77224045_77224121	0.0407272	PAX8	ENST00000320963.5|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain 	ENST00000394883.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr3_-_169587621_169587728	0.0403978	PAX8	ENST00000523069.1|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000316428.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000264676.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31
hg19_v2_chr15_+_77223960_77223994	0.0401974	PAX8	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr9_+_27109440_27109456	0.0401821	PAX8	ENST00000519080.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr8_+_124428959_124428971	0.0396939	PAX8	ENST00000287387.2|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1 	ENST00000523984.1|WDYHV1|ENSG00000156795.2|WDYHV motif containing 1
hg19_v2_chr9_-_98269481_98269691	0.0395274	PAX8	ENST00000418258.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000553011.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000551845.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr18_-_29264669_29264717	0.0390143	PAX8	ENST00000306851.5|B4GALT6|ENSG00000118276.7|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
hg19_v2_chr12_-_6961050_6961230	0.0387029	PAX8	ENST00000538862.2|CDCA3|ENSG00000111665.7|cell division cycle associated 3
hg19_v2_chr18_-_53068782_53068902	0.0384518	PAX8	ENST00000569012.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr9_+_27109133_27109187	0.0381802	PAX8	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chrX_+_23925918_23925918	0.0375547	PAX8	ENST00000379211.3|CXorf58|ENSG00000165182.6|chromosome X open reading frame 58
hg19_v2_chr9_-_128246769_128246780	0.0374907	PAX8	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr2_+_219524473_219524495	0.0365612	PAX8	ENST00000439945.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like 	ENST00000431802.1|BCS1L|ENSG00000074582.8|BC1 (ubiquinol-cytochrome c reductase) synthesis-like
hg19_v2_chr9_+_706842_706889	0.0365368	PAX8	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr3_+_11178779_11178942	0.0365093	PAX8	ENST00000438284.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr15_-_73925651_73925773	0.0362294	PAX8	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr6_+_72926145_72926245	0.0360236	PAX8	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr17_-_44657017_44657088	0.0353232	PAX8	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr1_+_16083154_16083168	0.0349649	PAX8	ENST00000375771.1|FBLIM1|ENSG00000162458.8|filamin binding LIM protein 1
hg19_v2_chrX_-_101410762_101411029	0.0348431	PAX8	ENST00000543160.1|BEX5|ENSG00000184515.6|brain expressed, X-linked 5 	ENST00000333643.3|BEX5|ENSG00000184515.6|brain expressed, X-linked 5
hg19_v2_chr7_+_7606497_7606595	0.0343714	PAX8	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr19_-_50168962_50169062	0.0337946	PAX8	ENST00000599223.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593922.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600022.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596765.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000599144.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000596822.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598108.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601373.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000595034.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601291.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr6_+_31126291_31126399	0.0336787	PAX8	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr12_-_18890940_18890991	0.0333677	PAX8	ENST00000543242.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000539072.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000541966.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000266505.7|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000447925.2|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1 	ENST00000435379.1|PLCZ1|ENSG00000139151.10|phospholipase C, zeta 1
hg19_v2_chr3_+_150264555_150264592	0.0331967	PAX8	ENST00000406576.3|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000482093.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000273435.5|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr12_+_18891045_18891066	0.0330081	PAX8	ENST00000317658.3|CAPZA3|ENSG00000177938.3|capping protein (actin filament) muscle Z-line, alpha 3
hg19_v2_chr2_+_90192768_90192768	0.0328624	PAX8	ENST00000390275.2|IGKV1D-13|ENSG00000211630.2|immunoglobulin kappa variable 1D-13
hg19_v2_chr3_+_130279178_130279178	0.0325758	PAX8	ENST00000358511.6|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6 	ENST00000453409.2|COL6A6|ENSG00000206384.6|collagen, type VI, alpha 6
hg19_v2_chr1_-_11036272_11036272	0.0324268	PAX8	ENST00000520253.1|C1orf127|ENSG00000175262.10|chromosome 1 open reading frame 127
hg19_v2_chr5_+_148521136_148521177	0.0323417	PAX8	ENST00000506113.1|ABLIM3|ENSG00000173210.15|actin binding LIM protein family, member 3
hg19_v2_chr1_-_184006829_184006911	0.0312083	PAX8	ENST00000361927.4|COLGALT2|ENSG00000198756.6|collagen beta(1-O)galactosyltransferase 2
hg19_v2_chr2_-_84686552_84686624	0.0308069	PAX8	ENST00000393868.2|SUCLG1|ENSG00000163541.7|succinate-CoA ligase, alpha subunit
hg19_v2_chr2_-_152590946_152590960	0.0299866	PAX8	ENST00000172853.10|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr15_-_43785303_43785369	0.0298099	PAX8	ENST00000382039.3|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000450115.2|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000382044.4|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr19_-_55791431_55791508	0.0296556	PAX8	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr18_-_53068982_53069082	0.0295913	PAX8	ENST00000590810.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr4_-_70653673_70653688	0.0293816	PAX8	ENST00000512870.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr17_+_7462031_7462086	0.0276421	PAX8	ENST00000380535.4|TNFSF13|ENSG00000161955.12|tumor necrosis factor (ligand) superfamily, member 13
hg19_v2_chr3_-_141719195_141719215	0.0274102	PAX8	ENST00000397991.4|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr4_+_2800291_2800332	0.0270442	PAX8	ENST00000504294.1|SH3BP2|ENSG00000087266.11|SH3-domain binding protein 2
hg19_v2_chr1_+_44889697_44889716	0.0267262	PAX8	ENST00000443020.2|RNF220|ENSG00000187147.13|ring finger protein 220
hg19_v2_chr10_-_43892668_43892794	0.0265813	PAX8	ENST00000544000.1|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr12_-_10251539_10251560	0.0257722	PAX8	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr2_-_152590982_152591001	0.0252007	PAX8	ENST00000409198.1|NEB|ENSG00000183091.15|nebulin 	ENST00000397345.3|NEB|ENSG00000183091.15|nebulin 	ENST00000427231.2|NEB|ENSG00000183091.15|nebulin
hg19_v2_chr12_-_11287243_11287243	0.0251125	PAX8	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr14_+_23938891_23938953	0.0251047	PAX8	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr12_-_10251576_10251599	0.0249563	PAX8	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr1_-_27952617_27952652	0.0249154	PAX8	ENST00000457296.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr2_+_114195268_114195340	0.0247144	PAX8	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr4_-_145061788_145061904	0.0245953	PAX8	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr19_+_54704718_54704742	0.0244907	PAX8	ENST00000391752.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000402367.1|RPS9|ENSG00000170889.9|ribosomal protein S9 	ENST00000391751.3|RPS9|ENSG00000170889.9|ribosomal protein S9
hg19_v2_chr11_+_20044096_20044116	0.0243838	PAX8	ENST00000533917.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr10_+_103911926_103911967	0.0237946	PAX8	ENST00000605788.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1 	ENST00000405356.1|NOLC1|ENSG00000166197.12|nucleolar and coiled-body phosphoprotein 1
hg19_v2_chr11_+_107461804_107461882	0.0237597	PAX8	ENST00000531234.1|ELMOD1|ENSG00000110675.8|ELMO/CED-12 domain containing 1
hg19_v2_chr5_+_140248518_140248689	0.022497	PAX8	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr1_+_197382957_197382964	0.0219892	PAX8	ENST00000367397.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr17_-_39646116_39646164	0.0214506	PAX8	ENST00000328119.6|KRT36|ENSG00000126337.9|keratin 36
hg19_v2_chr6_+_147527103_147527118	0.0210273	PAX8	ENST00000179882.6|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr5_+_55147205_55147334	0.0209427	PAX8	ENST00000396836.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000396834.1|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000447346.2|IL31RA|ENSG00000164509.9|interleukin 31 receptor A 	ENST00000359040.5|IL31RA|ENSG00000164509.9|interleukin 31 receptor A
hg19_v2_chr6_+_71276596_71276649	0.0199308	PAX8	ENST00000370474.3|C6orf57|ENSG00000154079.5|chromosome 6 open reading frame 57
hg19_v2_chr1_-_27952741_27952753	0.0199026	PAX8	ENST00000399173.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr1_-_157522260_157522315	0.0198306	PAX8	ENST00000368191.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5 	ENST00000361835.3|FCRL5|ENSG00000143297.14|Fc receptor-like 5
hg19_v2_chr7_+_95171457_95171457	0.0197413	PAX8	ENST00000601424.1|AC002451.1|ENSG00000269449.1|Protein LOC100996577
hg19_v2_chr3_+_125694347_125694467	0.0192017	PAX8	ENST00000505382.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B 	ENST00000511082.1|ROPN1B|ENSG00000114547.5|rhophilin associated tail protein 1B
hg19_v2_chr3_-_189840223_189840229	0.0191548	PAX8	ENST00000427335.2|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr15_-_35088340_35088340	0.0181906	PAX8	ENST00000290378.4|ACTC1|ENSG00000159251.6|actin, alpha, cardiac muscle 1
hg19_v2_chr3_+_186435065_186435126	0.0180267	PAX8	ENST00000287611.2|KNG1|ENSG00000113889.7|kininogen 1 	ENST00000265023.4|KNG1|ENSG00000113889.7|kininogen 1
hg19_v2_chr7_-_56160625_56160652	0.0174398	PAX8	ENST00000446428.1|PHKG1|ENSG00000164776.5|phosphorylase kinase, gamma 1 (muscle) 	ENST00000432123.1|PHKG1|ENSG00000164776.5|phosphorylase kinase, gamma 1 (muscle) 	ENST00000452681.2|PHKG1|ENSG00000164776.5|phosphorylase kinase, gamma 1 (muscle) 	ENST00000537360.1|PHKG1|ENSG00000164776.5|phosphorylase kinase, gamma 1 (muscle)
hg19_v2_chr6_+_43266063_43266097	0.0169721	PAX8	ENST00000372574.3|SLC22A7|ENSG00000137204.10|solute carrier family 22 (organic anion transporter), member 7
hg19_v2_chr5_-_156390230_156390266	0.0167888	PAX8	ENST00000407087.3|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4 	ENST00000274532.2|TIMD4|ENSG00000145850.4|T-cell immunoglobulin and mucin domain containing 4
hg19_v2_chrX_+_55649833_55649833	0.0164634	PAX8	ENST00000339140.3|FOXR2|ENSG00000189299.5|forkhead box R2
hg19_v2_chr19_+_50169216_50169285	0.0162261	PAX8	ENST00000594157.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000600947.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich) 	ENST00000598306.1|BCL2L12|ENSG00000126453.5|BCL2-like 12 (proline rich)
hg19_v2_chr8_-_21771182_21771208	0.0156853	PAX8	ENST00000523932.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa 	ENST00000544659.1|DOK2|ENSG00000147443.8|docking protein 2, 56kDa
hg19_v2_chr4_-_89951028_89951062	0.0146285	PAX8	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr8_-_66546373_66546428	0.0142965	PAX8	ENST00000518908.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000458464.2|ARMC1|ENSG00000104442.5|armadillo repeat containing 1 	ENST00000519352.1|ARMC1|ENSG00000104442.5|armadillo repeat containing 1
hg19_v2_chr15_-_43785274_43785288	0.013944	PAX8	ENST00000413546.1|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr12_+_113229962_113230003	0.0135815	PAX8	ENST00000553114.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse) 	ENST00000548866.1|RPH3A|ENSG00000089169.10|rabphilin 3A homolog (mouse)
hg19_v2_chr4_+_156680143_156680152	0.0131761	PAX8	ENST00000505154.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr6_+_72922505_72922516	0.0128775	PAX8	ENST00000401910.3|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr2_+_98993751_98993751	0.0127927	PAX8	ENST00000409937.1|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3
hg19_v2_chr17_+_48624450_48624571	0.0127198	PAX8	ENST00000006658.6|SPATA20|ENSG00000006282.15|spermatogenesis associated 20 	ENST00000356488.4|SPATA20|ENSG00000006282.15|spermatogenesis associated 20 	ENST00000393244.3|SPATA20|ENSG00000006282.15|spermatogenesis associated 20
hg19_v2_chr11_+_7618413_7618427	0.0125997	PAX8	ENST00000528883.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr17_-_67057203_67057228	0.0121149	PAX8	ENST00000340001.4|ABCA9|ENSG00000154258.12|ATP-binding cassette, sub-family A (ABC1), member 9
hg19_v2_chr11_+_113185292_113185325	0.0118809	PAX8	ENST00000429951.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000442859.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000531164.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000529850.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000314756.3|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12 	ENST00000525965.1|TTC12|ENSG00000149292.12|tetratricopeptide repeat domain 12
hg19_v2_chr6_+_72922590_72922605	0.0116919	PAX8	ENST00000523963.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr10_-_126694575_126694592	0.0106669	PAX8	ENST00000334808.6|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr8_-_7243080_7243080	0.0104198	PAX8	ENST00000400156.4|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr19_+_35630926_35631009	0.0100923	PAX8	ENST00000588081.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1 	ENST00000589121.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr6_+_160542821_160542852	0.0100711	PAX8	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr2_-_179672142_179672157	0.0100096	PAX8	ENST00000342992.6|TTN|ENSG00000155657.19|titin 	ENST00000360870.5|TTN|ENSG00000155657.19|titin 	ENST00000460472.2|TTN|ENSG00000155657.19|titin 	ENST00000589042.1|TTN|ENSG00000155657.19|titin 	ENST00000591111.1|TTN|ENSG00000155657.19|titin 	ENST00000342175.6|TTN|ENSG00000155657.19|titin 	ENST00000359218.5|TTN|ENSG00000155657.19|titin
hg19_v2_chr1_-_86848760_86848879	0.00920163	PAX8	ENST00000460698.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr3_-_107941230_107941417	0.00816616	PAX8	ENST00000264538.3|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr1_-_27953031_27953113	0.00755606	PAX8	ENST00000374003.3|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr9_+_71944241_71944241	0.00737222	PAX8	ENST00000257515.8|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr7_-_137686791_137686821	0.00734924	PAX8	ENST00000452463.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000330387.6|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2 	ENST00000456390.1|CREB3L2|ENSG00000182158.10|cAMP responsive element binding protein 3-like 2
hg19_v2_chr19_-_50169064_50169132	0.007251	PAX8	ENST00000593337.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000598808.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000600453.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000593818.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000597198.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000601809.1|IRF3|ENSG00000126456.11|interferon regulatory factor 3 	ENST00000377139.3|IRF3|ENSG00000126456.11|interferon regulatory factor 3
hg19_v2_chr1_-_153514241_153514241	0.0072028	PAX8	ENST00000368718.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5 	ENST00000359215.1|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr6_+_41196052_41196063	0.00565132	PAX8	ENST00000341495.2|TREML4|ENSG00000188056.7|triggering receptor expressed on myeloid cells-like 4
hg19_v2_chr7_+_107384142_107384173	0.00560438	PAX8	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr4_+_156680153_156680242	0.00527335	PAX8	ENST00000502959.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000505764.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000507146.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000264424.8|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3 	ENST00000503520.1|GUCY1B3|ENSG00000061918.8|guanylate cyclase 1, soluble, beta 3
hg19_v2_chr17_+_1933404_1933457	0.00461126	PAX8	ENST00000263083.6|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1 	ENST00000571418.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr7_+_143806607_143806607	0.00385151	PAX8	ENST00000408979.2|OR2A2|ENSG00000221989.2|olfactory receptor, family 2, subfamily A, member 2
hg19_v2_chr10_-_104597286_104597295	0.0033163	PAX8	ENST00000369887.3|CYP17A1|ENSG00000148795.5|cytochrome P450, family 17, subfamily A, polypeptide 1
hg19_v2_chr1_-_231004220_231004399	0.00298162	PAX8	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr19_-_35992780_35992815	0.00270272	PAX8	ENST00000593342.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000601650.1|DMKN|ENSG00000161249.16|dermokine 	ENST00000408915.2|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr1_+_203734296_203734318	0.00224396	PAX8	ENST00000442561.2|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1 	ENST00000367217.5|LAX1|ENSG00000122188.8|lymphocyte transmembrane adaptor 1
hg19_v2_chr1_+_145293371_145293371	0.00220649	PAX8	ENST00000342960.5|NBPF10|ENSG00000163386.16|neuroblastoma breakpoint family, member 10
hg19_v2_chr9_+_131549610_131549629	0.00169929	PAX8	ENST00000223865.8|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr21_-_43816052_43816116	2.84461e-05	PAX8	ENST00000398405.1|TMPRSS3|ENSG00000160183.9|transmembrane protease, serine 3
