hg19_v2_chr11_-_67397371_67397416	0.186496	PAX1_PAX9	ENST00000376693.2|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8 	ENST00000301490.4|NUDT8|ENSG00000167799.5|nudix (nucleoside diphosphate linked moiety X)-type motif 8
hg19_v2_chr4_+_75230853_75230871	0.148239	PAX1_PAX9	ENST00000244869.2|EREG|ENSG00000124882.3|epiregulin
hg19_v2_chr2_+_119699864_119699905	0.136978	PAX1_PAX9	ENST00000541757.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure 	ENST00000412481.1|MARCO|ENSG00000019169.9|macrophage receptor with collagenous structure
hg19_v2_chr2_-_207629997_207630030	0.123381	PAX1_PAX9	ENST00000454776.2|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr17_-_3461092_3461126	0.107325	PAX1_PAX9	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr8_+_84824920_84824948	0.0993441	PAX1_PAX9	ENST00000523678.1|RP11-120I21.2|ENSG00000254202.1|RP11-120I21.2
hg19_v2_chr8_-_121825088_121825094	0.0992813	PAX1_PAX9	ENST00000520717.1|SNTB1|ENSG00000172164.9|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
hg19_v2_chr8_-_23282820_23282846	0.087734	PAX1_PAX9	ENST00000520871.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr8_-_23282797_23282804	0.086348	PAX1_PAX9	ENST00000524144.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr2_-_207630033_207630061	0.0775081	PAX1_PAX9	ENST00000449792.1|MDH1B|ENSG00000138400.8|malate dehydrogenase 1B, NAD (soluble)
hg19_v2_chr8_-_101965559_101965570	0.0724976	PAX1_PAX9	ENST00000353245.3|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr13_+_98086445_98086493	0.0667583	PAX1_PAX9	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr11_+_12308447_12308447	0.06611	PAX1_PAX9	ENST00000256186.2|MICALCL|ENSG00000133808.4|MICAL C-terminal like
hg19_v2_chr4_+_123747979_123747994	0.0591943	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr9_+_33750515_33750648	0.0564729	PAX1_PAX9	ENST00000361005.5|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr4_+_123747834_123747863	0.0549776	PAX1_PAX9	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr10_+_30723105_30723173	0.0477167	PAX1_PAX9	ENST00000375322.2|MAP3K8|ENSG00000107968.5|mitogen-activated protein kinase kinase kinase 8
hg19_v2_chr14_+_39703112_39703135	0.0470821	PAX1_PAX9	ENST00000555143.1|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2 	ENST00000280082.3|MIA2|ENSG00000150526.7|melanoma inhibitory activity 2
hg19_v2_chr8_-_101965146_101965236	0.0461563	PAX1_PAX9	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr19_-_5838768_5838836	0.0460196	PAX1_PAX9	ENST00000527106.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000531199.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase) 	ENST00000529165.1|FUT6|ENSG00000156413.9|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)
hg19_v2_chr10_-_43904608_43904640	0.0425484	PAX1_PAX9	ENST00000337970.3|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr11_-_126138808_126138877	0.0361944	PAX1_PAX9	ENST00000332118.6|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein) 	ENST00000532259.1|SRPR|ENSG00000182934.7|signal recognition particle receptor (docking protein)
hg19_v2_chr9_+_33750667_33750819	0.0352661	PAX1_PAX9	ENST00000457896.1|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000342836.4|PRSS3|ENSG00000010438.12|protease, serine, 3 	ENST00000429677.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr5_+_133842243_133842269	0.0331064	PAX1_PAX9	ENST00000515627.2|AC005355.2|ENSG00000251169.2|AC005355.2
hg19_v2_chrX_-_153707246_153707306	0.0315825	PAX1_PAX9	ENST00000407062.1|LAGE3|ENSG00000196976.5|L antigen family, member 3
hg19_v2_chr1_+_26758849_26758899	0.0315761	PAX1_PAX9	ENST00000533087.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000531312.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525165.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525326.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525546.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000436153.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000530781.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr18_-_33077556_33077613	0.027018	PAX1_PAX9	ENST00000589273.1|INO80C|ENSG00000153391.11|INO80 complex subunit C 	ENST00000586489.1|INO80C|ENSG00000153391.11|INO80 complex subunit C
hg19_v2_chr4_-_77997126_77997158	0.0247764	PAX1_PAX9	ENST00000537948.1|CCNI|ENSG00000118816.5|cyclin I 	ENST00000507788.1|CCNI|ENSG00000118816.5|cyclin I 	ENST00000237654.4|CCNI|ENSG00000118816.5|cyclin I
hg19_v2_chr2_-_175711978_175712109	0.0242885	PAX1_PAX9	ENST00000409089.2|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr19_-_39104556_39104568	0.023887	PAX1_PAX9	ENST00000423454.2|MAP4K1|ENSG00000104814.8|mitogen-activated protein kinase kinase kinase kinase 1
hg19_v2_chr14_+_64854958_64855091	0.0222287	PAX1_PAX9	ENST00000555709.2|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554739.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000554768.1|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase 	ENST00000216605.8|MTHFD1|ENSG00000100714.11|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase
hg19_v2_chr9_+_33795533_33795562	0.0217887	PAX1_PAX9	ENST00000379405.3|PRSS3|ENSG00000010438.12|protease, serine, 3
hg19_v2_chr6_+_34857019_34857117	0.0213537	PAX1_PAX9	ENST00000360359.3|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A 	ENST00000535627.1|ANKS1A|ENSG00000064999.12|ankyrin repeat and sterile alpha motif domain containing 1A
hg19_v2_chr7_-_22234381_22234430	0.0207431	PAX1_PAX9	ENST00000458533.1|RAPGEF5|ENSG00000136237.14|Rap guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr20_-_17641097_17641152	0.0197229	PAX1_PAX9	ENST00000246043.4|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr2_+_234160340_234160360	0.0195179	PAX1_PAX9	ENST00000417017.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392020.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000392018.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr10_-_99393242_99393344	0.0193214	PAX1_PAX9	ENST00000370635.3|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000478953.1|MORN4|ENSG00000171160.13|MORN repeat containing 4 	ENST00000335628.3|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr1_+_26758790_26758847	0.0191883	PAX1_PAX9	ENST00000427245.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000525682.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000236342.7|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000526219.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000374185.3|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase 	ENST00000360009.2|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr9_-_124991124_124991246	0.0189327	PAX1_PAX9	ENST00000394319.4|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000340587.3|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr6_+_74104471_74104528	0.0188118	PAX1_PAX9	ENST00000370336.4|DDX43|ENSG00000080007.6|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
hg19_v2_chr8_-_23261589_23261753	0.018206	PAX1_PAX9	ENST00000524168.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000523833.2|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000519243.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000389131.3|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr9_+_96793076_96793128	0.0180228	PAX1_PAX9	ENST00000375360.3|PTPDC1|ENSG00000158079.10|protein tyrosine phosphatase domain containing 1
hg19_v2_chr14_-_69261310_69261453	0.0167099	PAX1_PAX9	ENST00000336440.3|ZFP36L1|ENSG00000185650.8|ZFP36 ring finger protein-like 1
hg19_v2_chr9_+_6716478_6716551	0.0160185	PAX1_PAX9	ENST00000452643.1|RP11-390F4.3|ENSG00000225489.2|RP11-390F4.3
hg19_v2_chr3_-_57113281_57113312	0.0158296	PAX1_PAX9	ENST00000468466.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr2_+_207630081_207630347	0.0152158	PAX1_PAX9	ENST00000236980.6|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000418289.1|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000402774.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000403094.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2
hg19_v2_chr7_-_19157248_19157295	0.0151038	PAX1_PAX9	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr7_-_112758665_112758672	0.0150635	PAX1_PAX9	ENST00000397764.3|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr17_+_15848231_15848231	0.0148833	PAX1_PAX9	ENST00000304222.2|ADORA2B|ENSG00000170425.3|adenosine A2b receptor
hg19_v2_chrX_+_148622513_148622612	0.014747	PAX1_PAX9	ENST00000393985.3|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423421.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000423540.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000434353.2|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A 	ENST00000514208.1|CXorf40A|ENSG00000197620.6|chromosome X open reading frame 40A
hg19_v2_chr14_-_91884115_91884127	0.0131746	PAX1_PAX9	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr1_+_26759295_26759382	0.0130161	PAX1_PAX9	ENST00000430232.1|DHDDS|ENSG00000117682.12|dehydrodolichyl diphosphate synthase
hg19_v2_chr6_-_137366163_137366298	0.0117526	PAX1_PAX9	ENST00000367748.1|IL20RA|ENSG00000016402.8|interleukin 20 receptor, alpha
hg19_v2_chr3_-_57113314_57113350	0.0115702	PAX1_PAX9	ENST00000338458.4|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000468727.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr10_-_99393208_99393237	0.0113498	PAX1_PAX9	ENST00000307450.6|MORN4|ENSG00000171160.13|MORN repeat containing 4
hg19_v2_chr11_+_61522844_61522875	0.0111947	PAX1_PAX9	ENST00000265460.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr12_-_101801505_101801598	0.0111941	PAX1_PAX9	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr3_+_127771212_127771316	0.0108106	PAX1_PAX9	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr13_+_21141208_21141265	0.00966476	PAX1_PAX9	ENST00000351808.5|IFT88|ENSG00000032742.13|intraflagellar transport 88 homolog (Chlamydomonas)
hg19_v2_chr7_-_112758589_112758619	0.00961466	PAX1_PAX9	ENST00000413744.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000439551.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000441359.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr3_+_31574189_31574282	0.00891304	PAX1_PAX9	ENST00000295770.2|STT3B|ENSG00000163527.5|STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
hg19_v2_chr1_+_45140360_45140399	0.00850793	PAX1_PAX9	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr19_-_18995029_18995050	0.00800278	PAX1_PAX9	ENST00000596048.1|CERS1|ENSG00000223802.3|ceramide synthase 1
hg19_v2_chr3_-_25824872_25824913	0.00730563	PAX1_PAX9	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr2_-_162931052_162931063	0.00658944	PAX1_PAX9	ENST00000360534.3|DPP4|ENSG00000197635.5|dipeptidyl-peptidase 4
hg19_v2_chr11_+_63870660_63870660	0.00615435	PAX1_PAX9	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr5_-_133747589_133747603	0.00495024	PAX1_PAX9	ENST00000458198.2|CDKN2AIPNL|ENSG00000237190.3|CDKN2A interacting protein N-terminal like
hg19_v2_chr2_+_234160217_234160335	0.0041848	PAX1_PAX9	ENST00000392017.4|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000347464.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000444735.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000373525.5|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae) 	ENST00000419681.1|ATG16L1|ENSG00000085978.17|autophagy related 16-like 1 (S. cerevisiae)
hg19_v2_chr21_-_33104367_33104441	0.00412092	PAX1_PAX9	ENST00000286835.7|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4 	ENST00000399804.1|SCAF4|ENSG00000156304.10|SR-related CTD-associated factor 4
hg19_v2_chr6_-_170893669_170893740	0.00367987	PAX1_PAX9	ENST00000392090.2|PDCD2|ENSG00000071994.6|programmed cell death 2 	ENST00000542896.1|PDCD2|ENSG00000071994.6|programmed cell death 2 	ENST00000453163.2|PDCD2|ENSG00000071994.6|programmed cell death 2 	ENST00000537445.1|PDCD2|ENSG00000071994.6|programmed cell death 2
hg19_v2_chr9_-_104249400_104249512	0.00280249	PAX1_PAX9	ENST00000374848.3|TMEM246|ENSG00000165152.4|transmembrane protein 246
hg19_v2_chr1_+_213031570_213031597	0.00244421	PAX1_PAX9	ENST00000366971.4|FLVCR1|ENSG00000162769.8|feline leukemia virus subgroup C cellular receptor 1
hg19_v2_chr17_+_37356586_37356612	0.00241188	PAX1_PAX9	ENST00000579260.1|RPL19|ENSG00000108298.5|ribosomal protein L19 	ENST00000582193.1|RPL19|ENSG00000108298.5|ribosomal protein L19
hg19_v2_chr2_-_39414848_39414848	0.00193354	PAX1_PAX9	ENST00000451199.1|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4
hg19_v2_chr22_-_41940404_41940610	0.0011611	PAX1_PAX9	ENST00000355209.4|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000337566.5|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000396504.2|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD) 	ENST00000407461.1|POLR3H|ENSG00000100413.12|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)
hg19_v2_chr6_+_159290917_159290971	0.000813945	PAX1_PAX9	ENST00000367072.1|C6orf99|ENSG00000203711.7|chromosome 6 open reading frame 99
hg19_v2_chr10_+_82297658_82297658	0.000682945	PAX1_PAX9	ENST00000339284.2|SH2D4B|ENSG00000178217.9|SH2 domain containing 4B
hg19_v2_chr3_-_25824925_25825042	0.000285486	PAX1_PAX9	ENST00000396649.3|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000428257.1|NGLY1|ENSG00000151092.12|N-glycanase 1 	ENST00000280700.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr6_-_170893742_170893754	0.000126085	PAX1_PAX9	ENST00000443345.2|PDCD2|ENSG00000071994.6|programmed cell death 2 	ENST00000541970.1|PDCD2|ENSG00000071994.6|programmed cell death 2
