hg19_v2_chr19_+_54609230_54609272	0.676888	NKX3-1	ENST00000420296.1|NDUFA3|ENSG00000170906.11|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa
hg19_v2_chr11_-_104480019_104480058	0.67277	NKX3-1	ENST00000536529.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000545630.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1	ENST00000538641.1|RP11-886D15.1|ENSG00000256422.1|RP11-886D15.1
hg19_v2_chr1_-_152779104_152779133	0.653188	NKX3-1	ENST00000606576.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C 	ENST00000368768.1|LCE1C|ENSG00000197084.4|late cornified envelope 1C
hg19_v2_chr19_-_12708113_12708125	0.653055	NKX3-1	ENST00000440366.1|ZNF490|ENSG00000188033.5|zinc finger protein 490
hg19_v2_chr6_+_26251835_26251879	0.607638	NKX3-1	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr16_+_1832902_1833008	0.546777	NKX3-1	ENST00000262302.9|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000563136.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565987.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000543305.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000568287.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2 	ENST00000565134.1|NUBP2|ENSG00000095906.12|nucleotide binding protein 2
hg19_v2_chr1_-_153113927_153113972	0.541785	NKX3-1	ENST00000368752.4|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr12_-_92536433_92536459	0.532042	NKX3-1	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr1_-_203273676_203273784	0.52436	NKX3-1	ENST00000425698.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chr16_+_47496023_47496116	0.519816	NKX3-1	ENST00000567200.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr1_-_153066998_153067008	0.491861	NKX3-1	ENST00000368750.3|SPRR2E|ENSG00000203785.4|small proline-rich protein 2E
hg19_v2_chrY_+_15418467_15418467	0.489033	NKX3-1	ENST00000595988.1|AC010877.1|ENSG00000269291.1|Uncharacterized protein
hg19_v2_chr19_-_45457264_45457264	0.486869	NKX3-1	ENST00000591646.1|CTB-129P6.11|ENSG00000267114.1|Uncharacterized protein
hg19_v2_chr11_-_64684672_64684722	0.459384	NKX3-1	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr14_+_101293687_101293748	0.457829	NKX3-1	ENST00000455286.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr19_+_56111680_56111735	0.428728	NKX3-1	ENST00000301073.3|ZNF524|ENSG00000171443.6|zinc finger protein 524
hg19_v2_chr4_+_159131596_159131623	0.410343	NKX3-1	ENST00000512481.1|TMEM144|ENSG00000164124.6|transmembrane protein 144
hg19_v2_chr19_-_44174330_44174502	0.399295	NKX3-1	ENST00000340093.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr12_-_92821922_92821924	0.381687	NKX3-1	ENST00000538965.1|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand 	ENST00000378487.2|CLLU1OS|ENSG00000205057.3|chronic lymphocytic leukemia up-regulated 1 opposite strand
hg19_v2_chr15_-_74726283_74726306	0.378383	NKX3-1	ENST00000543145.2|SEMA7A|ENSG00000138623.5|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)
hg19_v2_chr3_-_49726104_49726106	0.375365	NKX3-1	ENST00000383728.3|MST1|ENSG00000173531.11|macrophage stimulating 1 (hepatocyte growth factor-like) 	ENST00000545762.1|MST1|ENSG00000173531.11|macrophage stimulating 1 (hepatocyte growth factor-like)
hg19_v2_chr19_+_17970693_17970741	0.344079	NKX3-1	ENST00000600147.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a 	ENST00000599898.1|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr19_-_1592652_1592762	0.340506	NKX3-1	ENST00000156825.1|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3 	ENST00000434436.3|MBD3|ENSG00000071655.13|methyl-CpG binding domain protein 3
hg19_v2_chr6_+_26020672_26020718	0.325979	NKX3-1	ENST00000357647.3|HIST1H3A|ENSG00000198366.5|histone cluster 1, H3a
hg19_v2_chr5_-_176889381_176889432	0.31986	NKX3-1	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr17_-_34257731_34257766	0.318061	NKX3-1	ENST00000431884.2|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000425909.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000394528.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000430160.2|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr6_+_80129989_80130014	0.317772	NKX3-1	ENST00000429444.1|RP1-232L24.3|ENSG00000231533.1|RP1-232L24.3
hg19_v2_chr11_-_62323702_62323738	0.306415	NKX3-1	ENST00000530285.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr6_-_26124138_26124168	0.305519	NKX3-1	ENST00000314332.5|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc 	ENST00000396984.1|HIST1H2BC|ENSG00000180596.7|histone cluster 1, H2bc
hg19_v2_chr8_+_27169138_27169161	0.303161	NKX3-1	ENST00000522338.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr11_+_64685026_64685071	0.303028	NKX3-1	ENST00000526559.1|PPP2R5B|ENSG00000068971.9|protein phosphatase 2, regulatory subunit B', beta
hg19_v2_chr16_-_31076332_31076409	0.30223	NKX3-1	ENST00000539836.3|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000535577.1|ZNF668|ENSG00000167394.8|zinc finger protein 668 	ENST00000442862.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr16_+_83986827_83986852	0.300995	NKX3-1	ENST00000393306.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1 	ENST00000565123.1|OSGIN1|ENSG00000140961.8|oxidative stress induced growth inhibitor 1
hg19_v2_chr19_+_17970677_17970686	0.29916	NKX3-1	ENST00000222247.5|RPL18A|ENSG00000105640.8|ribosomal protein L18a
hg19_v2_chr9_+_97766469_97766518	0.295644	NKX3-1	ENST00000433691.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr3_-_48732926_48733015	0.293619	NKX3-1	ENST00000453202.1|IP6K2|ENSG00000068745.10|inositol hexakisphosphate kinase 2
hg19_v2_chr16_+_3068393_3068446	0.288578	NKX3-1	ENST00000573001.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr4_-_70626314_70626325	0.287647	NKX3-1	ENST00000510821.1|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr11_-_9482010_9482185	0.282789	NKX3-1	ENST00000596206.1|AC132192.1|ENSG00000268403.1|LOC644656 protein; Uncharacterized protein
hg19_v2_chr17_+_42422629_42422636	0.273267	NKX3-1	ENST00000589536.1|GRN|ENSG00000030582.12|granulin 	ENST00000587109.1|GRN|ENSG00000030582.12|granulin 	ENST00000587518.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr12_+_113354341_113354422	0.272342	NKX3-1	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr11_+_65337901_65338153	0.270883	NKX3-1	ENST00000309328.3|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000531405.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000527920.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526877.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000533115.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1 	ENST00000526433.1|SSSCA1|ENSG00000173465.3|Sjogren syndrome/scleroderma autoantigen 1
hg19_v2_chr3_+_52489503_52489540	0.268243	NKX3-1	ENST00000345716.4|NISCH|ENSG00000010322.11|nischarin
hg19_v2_chr19_+_17830051_17830317	0.267989	NKX3-1	ENST00000594625.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000324096.4|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000600186.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S 	ENST00000597735.1|MAP1S|ENSG00000130479.6|microtubule-associated protein 1S
hg19_v2_chr19_-_42931567_42931581	0.257695	NKX3-1	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr6_+_26217159_26217170	0.254352	NKX3-1	ENST00000303910.2|HIST1H2AE|ENSG00000168274.3|histone cluster 1, H2ae
hg19_v2_chr21_-_46964306_46964332	0.249912	NKX3-1	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr17_-_76836963_76836987	0.246475	NKX3-1	ENST00000312010.6|USP36|ENSG00000055483.15|ubiquitin specific peptidase 36
hg19_v2_chrX_+_153237740_153237778	0.22972	NKX3-1	ENST00000369982.4|TMEM187|ENSG00000177854.7|transmembrane protein 187
hg19_v2_chr8_+_30300119_30300137	0.228006	NKX3-1	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr11_+_67798090_67798101	0.227983	NKX3-1	ENST00000313468.5|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr17_-_39661947_39661969	0.22099	NKX3-1	ENST00000590425.1|KRT13|ENSG00000171401.10|keratin 13
hg19_v2_chr17_-_29645836_29645853	0.220957	NKX3-1	ENST00000578584.1|CTD-2370N5.3|ENSG00000265118.1|CTD-2370N5.3
hg19_v2_chr1_-_32169761_32169776	0.220861	NKX3-1	ENST00000271069.6|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr11_-_64536521_64536543	0.220224	NKX3-1	ENST00000486867.1|SF1|ENSG00000168066.16|splicing factor 1
hg19_v2_chr16_-_3068171_3068191	0.216232	NKX3-1	ENST00000572154.1|CLDN6|ENSG00000184697.6|claudin 6 	ENST00000328796.4|CLDN6|ENSG00000184697.6|claudin 6
hg19_v2_chrX_-_153236819_153236978	0.214978	NKX3-1	ENST00000354233.3|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr19_-_11266437_11266467	0.214516	NKX3-1	ENST00000586708.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000591396.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000592967.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000585486.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component 	ENST00000585567.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component
hg19_v2_chr17_+_42422637_42422655	0.209194	NKX3-1	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr14_+_23654525_23654545	0.2071	NKX3-1	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr11_+_67798114_67798227	0.206764	NKX3-1	ENST00000453471.2|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000528492.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000526339.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase) 	ENST00000525419.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr1_-_32169920_32169988	0.206682	NKX3-1	ENST00000373672.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1 	ENST00000373668.3|COL16A1|ENSG00000084636.13|collagen, type XVI, alpha 1
hg19_v2_chr3_-_10334617_10334637	0.20183	NKX3-1	ENST00000429122.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000425479.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000335542.8|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr19_+_16308711_16308786	0.199506	NKX3-1	ENST00000429941.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000444449.2|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000589822.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr17_+_38334501_38334501	0.198859	NKX3-1	ENST00000541245.1|RAPGEFL1|ENSG00000108352.7|Rap guanine nucleotide exchange factor (GEF)-like 1
hg19_v2_chr3_+_124223586_124223628	0.19817	NKX3-1	ENST00000393496.1|KALRN|ENSG00000160145.11|kalirin, RhoGEF kinase
hg19_v2_chr1_+_161475208_161475226	0.19786	NKX3-1	ENST00000367972.4|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32) 	ENST00000271450.6|FCGR2A|ENSG00000143226.9|Fc fragment of IgG, low affinity IIa, receptor (CD32)
hg19_v2_chr3_-_39196049_39196062	0.196229	NKX3-1	ENST00000514182.1|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr15_+_77713222_77713271	0.19482	NKX3-1	ENST00000558176.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr19_-_44174305_44174329	0.19236	NKX3-1	ENST00000601723.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor 	ENST00000339082.3|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr19_-_11266471_11266484	0.191157	NKX3-1	ENST00000592540.1|SPC24|ENSG00000161888.7|SPC24, NDC80 kinetochore complex component
hg19_v2_chr16_+_33204156_33204156	0.19018	NKX3-1	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr2_-_36779411_36779411	0.188519	NKX3-1	ENST00000406220.1|AC007401.2|ENSG00000217075.1|Uncharacterized protein
hg19_v2_chr17_+_42422662_42422678	0.18645	NKX3-1	ENST00000593167.1|GRN|ENSG00000030582.12|granulin 	ENST00000585512.1|GRN|ENSG00000030582.12|granulin 	ENST00000591740.1|GRN|ENSG00000030582.12|granulin 	ENST00000592783.1|GRN|ENSG00000030582.12|granulin 	ENST00000587387.1|GRN|ENSG00000030582.12|granulin 	ENST00000588237.1|GRN|ENSG00000030582.12|granulin 	ENST00000589265.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr6_-_160210692_160210705	0.182382	NKX3-1	ENST00000538128.1|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000537390.1|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chr19_+_17186577_17186637	0.180166	NKX3-1	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr1_-_6445809_6445885	0.17528	NKX3-1	ENST00000377855.2|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr17_-_36884451_36884451	0.174478	NKX3-1	ENST00000595377.1|AC006449.1|ENSG00000269094.1|NS5ATP13TP1; Uncharacterized protein
hg19_v2_chr10_+_18629628_18629672	0.174164	NKX3-1	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr11_+_101983176_101983245	0.173916	NKX3-1	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr15_-_93353028_93353119	0.172927	NKX3-1	ENST00000557398.2|FAM174B|ENSG00000185442.8|family with sequence similarity 174, member B
hg19_v2_chr4_-_76928641_76928668	0.172382	NKX3-1	ENST00000264888.5|CXCL9|ENSG00000138755.5|chemokine (C-X-C motif) ligand 9
hg19_v2_chrX_-_153237258_153237295	0.170779	NKX3-1	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr1_-_48866517_48866534	0.170702	NKX3-1	ENST00000371841.1|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr14_-_47812321_47812438	0.167577	NKX3-1	ENST00000357362.3|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000486952.2|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2 	ENST00000426342.1|MDGA2|ENSG00000139915.14|MAM domain containing glycosylphosphatidylinositol anchor 2
hg19_v2_chr6_-_144416737_144416766	0.166464	NKX3-1	ENST00000367569.2|SF3B5|ENSG00000169976.5|splicing factor 3b, subunit 5, 10kDa
hg19_v2_chr20_+_2821340_2821365	0.165489	NKX3-1	ENST00000380445.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000380469.3|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr11_+_114168085_114168222	0.162295	NKX3-1	ENST00000541754.1|NNMT|ENSG00000166741.3|nicotinamide N-methyltransferase
hg19_v2_chr4_-_105416039_105416065	0.161296	NKX3-1	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr11_+_67798363_67798433	0.159975	NKX3-1	ENST00000525628.1|NDUFS8|ENSG00000110717.6|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)
hg19_v2_chr10_+_32735030_32735110	0.156874	NKX3-1	ENST00000277657.6|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7 	ENST00000362006.5|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr3_-_10334585_10334601	0.156595	NKX3-1	ENST00000430179.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000449238.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000437422.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000287656.7|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000457360.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000439975.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000446937.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr22_+_18632666_18632764	0.156326	NKX3-1	ENST00000215794.7|USP18|ENSG00000184979.9|ubiquitin specific peptidase 18
hg19_v2_chr12_+_110011571_110011644	0.155534	NKX3-1	ENST00000539696.1|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000228510.3|MVK|ENSG00000110921.7|mevalonate kinase 	ENST00000392727.3|MVK|ENSG00000110921.7|mevalonate kinase
hg19_v2_chr15_+_44084040_44084155	0.15481	NKX3-1	ENST00000249786.4|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr16_-_3074231_3074313	0.145612	NKX3-1	ENST00000572355.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000248089.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000574980.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000354679.3|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000396916.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent) 	ENST00000573842.1|HCFC1R1|ENSG00000103145.6|host cell factor C1 regulator 1 (XPO1 dependent)
hg19_v2_chr11_+_7506713_7506773	0.140811	NKX3-1	ENST00000329293.3|OLFML1|ENSG00000183801.3|olfactomedin-like 1 	ENST00000534244.1|OLFML1|ENSG00000183801.3|olfactomedin-like 1
hg19_v2_chr19_+_10362882_10362952	0.140709	NKX3-1	ENST00000393733.2|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4 	ENST00000588502.1|MRPL4|ENSG00000105364.9|mitochondrial ribosomal protein L4
hg19_v2_chr16_-_31076273_31076290	0.140258	NKX3-1	ENST00000426488.2|ZNF668|ENSG00000167394.8|zinc finger protein 668
hg19_v2_chr15_-_79576156_79576222	0.138446	NKX3-1	ENST00000560452.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560872.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560732.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559979.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000560533.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000559225.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4
hg19_v2_chr19_+_16308659_16308670	0.138344	NKX3-1	ENST00000590263.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000590756.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit 	ENST00000541844.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr10_-_99185798_99185831	0.137905	NKX3-1	ENST00000439965.2|AL355490.1|ENSG00000224474.2|LOC644215 protein; Uncharacterized protein
hg19_v2_chr19_-_5719860_5719905	0.133953	NKX3-1	ENST00000590729.1|LONP1|ENSG00000196365.7|lon peptidase 1, mitochondrial
hg19_v2_chr17_-_295730_295730	0.133128	NKX3-1	ENST00000329099.4|FAM101B|ENSG00000183688.4|family with sequence similarity 101, member B
hg19_v2_chr12_-_53298841_53298867	0.131027	NKX3-1	ENST00000293308.6|KRT8|ENSG00000170421.7|keratin 8
hg19_v2_chr14_-_39417410_39417466	0.130649	NKX3-1	ENST00000557019.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000556116.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639 	ENST00000554732.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr10_+_46994087_46994087	0.130139	NKX3-1	ENST00000374317.1|GPRIN2|ENSG00000204175.4|G protein regulated inducer of neurite outgrowth 2
hg19_v2_chr14_+_95078714_95078739	0.128607	NKX3-1	ENST00000393078.3|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000393080.4|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 	ENST00000467132.1|SERPINA3|ENSG00000196136.12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3
hg19_v2_chr17_-_29624343_29624429	0.128569	NKX3-1	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr5_-_139937895_139937895	0.128002	NKX3-1	ENST00000336283.6|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chrX_-_51797351_51797351	0.127169	NKX3-1	ENST00000375644.3|RP11-114H20.1|ENSG00000182776.4|RP11-114H20.1
hg19_v2_chr4_+_108746282_108746364	0.126996	NKX3-1	ENST00000503862.1|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr3_-_48632593_48632770	0.125556	NKX3-1	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr5_-_1799864_1799930	0.12392	NKX3-1	ENST00000510999.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr20_-_2821271_2821343	0.123503	NKX3-1	ENST00000448755.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000360652.2|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr10_+_135204338_135204338	0.121313	NKX3-1	ENST00000468317.2|RP11-108K14.8|ENSG00000254536.1|Mitochondrial GTPase 1
hg19_v2_chr7_-_33080506_33080528	0.12065	NKX3-1	ENST00000381626.2|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000409467.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA 	ENST00000449201.1|NT5C3A|ENSG00000122643.14|5'-nucleotidase, cytosolic IIIA
hg19_v2_chr12_-_111926342_111926416	0.118419	NKX3-1	ENST00000389154.3|ATXN2|ENSG00000204842.10|ataxin 2
hg19_v2_chr11_+_9482551_9482604	0.117484	NKX3-1	ENST00000438144.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000526657.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000299606.2|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000534265.1|ZNF143|ENSG00000166478.5|zinc finger protein 143 	ENST00000412390.2|ZNF143|ENSG00000166478.5|zinc finger protein 143
hg19_v2_chr11_+_94277017_94277097	0.115858	NKX3-1	ENST00000358752.2|FUT4|ENSG00000196371.2|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)
hg19_v2_chr9_+_132565454_132565547	0.114946	NKX3-1	ENST00000427860.1|TOR1B|ENSG00000136816.11|torsin family 1, member B (torsin B)
hg19_v2_chr6_-_31648150_31648154	0.114385	NKX3-1	ENST00000375858.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000383237.4|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chr18_-_67623906_67624041	0.112428	NKX3-1	ENST00000583955.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr19_-_15544099_15544156	0.111895	NKX3-1	ENST00000599910.2|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chr14_-_65409438_65409479	0.111193	NKX3-1	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr20_-_2821756_2821836	0.110888	NKX3-1	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr11_-_46639436_46639466	0.109446	NKX3-1	ENST00000532281.1|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr1_-_153085984_153085999	0.108273	NKX3-1	ENST00000468739.1|SPRR2F|ENSG00000244094.1|small proline-rich protein 2F
hg19_v2_chr1_-_208417620_208417680	0.105556	NKX3-1	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr4_-_1685718_1686029	0.104513	NKX3-1	ENST00000472884.2|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000489363.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000308132.6|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A 	ENST00000463238.1|FAM53A|ENSG00000174137.8|family with sequence similarity 53, member A
hg19_v2_chr13_+_50570019_50570028	0.103025	NKX3-1	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr15_-_79576229_79576296	0.101709	NKX3-1	ENST00000557790.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4	ENST00000558297.1|RP11-17L5.4|ENSG00000259234.1|RP11-17L5.4
hg19_v2_chr14_-_65409502_65409531	0.101468	NKX3-1	ENST00000389614.5|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr1_-_153931052_153931124	0.100893	NKX3-1	ENST00000368630.3|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2 	ENST00000368633.1|CRTC2|ENSG00000160741.12|CREB regulated transcription coactivator 2
hg19_v2_chr10_-_4720301_4720325	0.098514	NKX3-1	ENST00000449712.1|LINC00704|ENSG00000231298.2|long intergenic non-protein coding RNA 704
hg19_v2_chrX_-_153637612_153637628	0.0980449	NKX3-1	ENST00000369807.1|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1 	ENST00000369808.3|DNASE1L1|ENSG00000013563.9|deoxyribonuclease I-like 1
hg19_v2_chr14_+_74551650_74551680	0.0977484	NKX3-1	ENST00000554938.1|LIN52|ENSG00000205659.6|lin-52 homolog (C. elegans)
hg19_v2_chr4_+_76481258_76481289	0.0956504	NKX3-1	ENST00000311623.4|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26 	ENST00000435974.2|C4orf26|ENSG00000174792.6|chromosome 4 open reading frame 26
hg19_v2_chr12_-_118628315_118628348	0.0947825	NKX3-1	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr14_-_74551096_74551171	0.0931399	NKX3-1	ENST00000350259.4|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr17_-_39661849_39661871	0.0922913	NKX3-1	ENST00000246635.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000336861.3|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587544.1|KRT13|ENSG00000171401.10|keratin 13 	ENST00000587435.1|KRT13|ENSG00000171401.10|keratin 13
hg19_v2_chrX_-_132231123_132231140	0.0919593	NKX3-1	ENST00000511190.1|USP26|ENSG00000134588.8|ubiquitin specific peptidase 26
hg19_v2_chr6_+_108616054_108616100	0.0913148	NKX3-1	ENST00000368977.4|LACE1|ENSG00000135537.12|lactation elevated 1
hg19_v2_chr19_-_55791563_55791749	0.0905008	NKX3-1	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr16_+_32264040_32264040	0.0891175	NKX3-1	ENST00000398664.3|TP53TG3D|ENSG00000205456.7|TP53 target 3D
hg19_v2_chr14_-_23388338_23388393	0.0860688	NKX3-1	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr17_-_7307358_7307456	0.0852702	NKX3-1	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr16_+_57406437_57406465	0.0835336	NKX3-1	ENST00000564948.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr17_+_48610074_48610107	0.0833598	NKX3-1	ENST00000503690.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000514874.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000537145.1|EPN3|ENSG00000049283.13|epsin 3 	ENST00000541226.1|EPN3|ENSG00000049283.13|epsin 3
hg19_v2_chr8_-_38034192_38034217	0.0828758	NKX3-1	ENST00000520755.1|LSM1|ENSG00000175324.5|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr14_-_59951112_59951148	0.0813052	NKX3-1	ENST00000247194.4|L3HYPDH|ENSG00000126790.7|L-3-hydroxyproline dehydratase (trans-)
hg19_v2_chr14_+_67656110_67656162	0.0810656	NKX3-1	ENST00000524532.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D 	ENST00000530728.1|FAM71D|ENSG00000172717.11|family with sequence similarity 71, member D
hg19_v2_chr9_+_116263639_116263707	0.0804524	NKX3-1	ENST00000343817.5|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr3_+_98482175_98482197	0.0787169	NKX3-1	ENST00000485391.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6 	ENST00000492254.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr11_+_64073022_64073056	0.0765727	NKX3-1	ENST00000406310.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000000442.6|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha 	ENST00000539594.1|ESRRA|ENSG00000173153.9|estrogen-related receptor alpha
hg19_v2_chr19_-_55791431_55791508	0.075257	NKX3-1	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr3_+_39509163_39509180	0.0750079	NKX3-1	ENST00000436143.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000441980.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000311042.6|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr22_+_44427230_44427253	0.0746923	NKX3-1	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr8_+_27168988_27169021	0.0744853	NKX3-1	ENST00000397501.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000338238.4|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta 	ENST00000544172.1|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr6_-_33285505_33285529	0.0739767	NKX3-1	ENST00000431845.2|ZBTB22|ENSG00000236104.2|zinc finger and BTB domain containing 22
hg19_v2_chr5_-_1799965_1800009	0.0737453	NKX3-1	ENST00000508987.1|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr16_-_69373396_69373570	0.0731253	NKX3-1	ENST00000562595.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000562081.1|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8 	ENST00000306875.4|COG8|ENSG00000213380.9|component of oligomeric golgi complex 8
hg19_v2_chrX_-_31285018_31285028	0.0728065	NKX3-1	ENST00000361471.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr9_+_134065506_134065509	0.0721128	NKX3-1	ENST00000483497.2|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr19_+_58193388_58193413	0.0719416	NKX3-1	ENST00000596085.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000594684.1|AC003006.7|ENSG00000269026.2|Uncharacterized protein
hg19_v2_chr16_-_32688053_32688053	0.0705304	NKX3-1	ENST00000398682.4|TP53TG3|ENSG00000183632.10|TP53 target 3
hg19_v2_chr3_+_139062838_139062881	0.0700988	NKX3-1	ENST00000310776.4|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465056.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22 	ENST00000465373.1|MRPS22|ENSG00000175110.7|mitochondrial ribosomal protein S22
hg19_v2_chr19_+_37341260_37341284	0.0699976	NKX3-1	ENST00000589046.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr18_-_67629015_67629039	0.0689102	NKX3-1	ENST00000579496.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr19_-_55791540_55791549	0.0687153	NKX3-1	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr6_-_144385698_144385742	0.0662515	NKX3-1	ENST00000444202.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1 	ENST00000437412.1|PLAGL1|ENSG00000118495.14|pleiomorphic adenoma gene-like 1
hg19_v2_chr11_-_118901559_118901621	0.0651337	NKX3-1	ENST00000330775.7|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000545985.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000357590.5|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4 	ENST00000538950.1|SLC37A4|ENSG00000137700.12|solute carrier family 37 (glucose-6-phosphate transporter), member 4
hg19_v2_chr15_+_99645277_99645292	0.0650978	NKX3-1	ENST00000336292.6|SYNM|ENSG00000182253.10|synemin, intermediate filament protein 	ENST00000328642.7|SYNM|ENSG00000182253.10|synemin, intermediate filament protein
hg19_v2_chr3_+_39509070_39509101	0.0647916	NKX3-1	ENST00000354668.4|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000428261.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000420739.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000415443.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000447324.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000383754.3|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr3_+_154801678_154801733	0.0641438	NKX3-1	ENST00000462837.1|MME|ENSG00000196549.6|membrane metallo-endopeptidase
hg19_v2_chr17_+_45973516_45973618	0.0638691	NKX3-1	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr7_+_100303676_100303719	0.0638113	NKX3-1	ENST00000303151.4|POP7|ENSG00000172336.4|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)
hg19_v2_chr2_-_27545921_27545981	0.0635856	NKX3-1	ENST00000402310.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405983.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000403262.2|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000428910.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000402722.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000399052.4|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000380044.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein 	ENST00000405076.1|MPV17|ENSG00000115204.10|MpV17 mitochondrial inner membrane protein
hg19_v2_chr3_+_26735991_26736046	0.0629106	NKX3-1	ENST00000456208.2|LRRC3B|ENSG00000179796.7|leucine rich repeat containing 3B
hg19_v2_chrX_-_31285042_31285103	0.0621692	NKX3-1	ENST00000378680.2|DMD|ENSG00000198947.10|dystrophin 	ENST00000378723.3|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr17_+_41150290_41150470	0.061215	NKX3-1	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr11_-_61687739_61687761	0.0608203	NKX3-1	ENST00000531922.1|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1 	ENST00000301773.5|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1
hg19_v2_chr15_-_50558223_50558263	0.0603847	NKX3-1	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr19_+_52704346_52704452	0.0602031	NKX3-1	ENST00000462990.1|PPP2R1A|ENSG00000105568.13|protein phosphatase 2, regulatory subunit A, alpha
hg19_v2_chr5_-_160279207_160279247	0.059467	NKX3-1	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr13_+_111893533_111893591	0.0593477	NKX3-1	ENST00000478679.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr4_-_10118469_10118521	0.0592447	NKX3-1	ENST00000499869.2|WDR1|ENSG00000071127.12|WD repeat domain 1
hg19_v2_chr6_-_127780510_127780539	0.0592129	NKX3-1	ENST00000487331.2|KIAA0408|ENSG00000189367.10|KIAA0408 	ENST00000483725.3|KIAA0408|ENSG00000189367.10|KIAA0408
hg19_v2_chr12_+_4829507_4829601	0.05878	NKX3-1	ENST00000252318.2|GALNT8|ENSG00000130035.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)
hg19_v2_chr15_+_85147127_85147142	0.0572505	NKX3-1	ENST00000541040.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000538076.1|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2 	ENST00000485222.2|ZSCAN2|ENSG00000176371.9|zinc finger and SCAN domain containing 2
hg19_v2_chr14_+_61449197_61449275	0.0564827	NKX3-1	ENST00000533744.2|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr5_+_140723601_140723601	0.0561651	NKX3-1	ENST00000253812.6|PCDHGA3|ENSG00000254245.1|protocadherin gamma subfamily A, 3
hg19_v2_chr8_-_101157680_101157680	0.0555054	NKX3-1	ENST00000428847.2|FBXO43|ENSG00000156509.9|F-box protein 43
hg19_v2_chr20_-_34330129_34330234	0.0548514	NKX3-1	ENST00000397370.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000528062.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000407261.4|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000374038.3|RBM39|ENSG00000131051.16|RNA binding motif protein 39 	ENST00000361162.6|RBM39|ENSG00000131051.16|RNA binding motif protein 39
hg19_v2_chr14_+_91709103_91709103	0.0543013	NKX3-1	ENST00000553725.1|CTD-2547L24.3|ENSG00000258875.1|HCG1816139; Uncharacterized protein
hg19_v2_chr5_+_176873446_176873516	0.0525908	NKX3-1	ENST00000507881.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr8_-_93029865_93029904	0.0523946	NKX3-1	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr11_-_71791726_71791756	0.0523882	NKX3-1	ENST00000393695.3|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr15_+_57540230_57540239	0.0522571	NKX3-1	ENST00000559703.1|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chr16_-_21436459_21436643	0.0516462	NKX3-1	ENST00000448012.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000504841.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3 	ENST00000419180.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr22_-_50523760_50523787	0.0505102	NKX3-1	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr18_-_3845293_3845318	0.0499341	NKX3-1	ENST00000400145.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr8_-_27168737_27168836	0.0498043	NKX3-1	ENST00000521253.1|TRIM35|ENSG00000104228.8|tripartite motif containing 35 	ENST00000305364.4|TRIM35|ENSG00000104228.8|tripartite motif containing 35
hg19_v2_chrX_+_51942963_51942963	0.0494497	NKX3-1	ENST00000375625.3|RP11-363G10.2|ENSG00000179028.4|RP11-363G10.2
hg19_v2_chr8_+_77593448_77593471	0.0492098	NKX3-1	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr5_-_9903938_9903991	0.0490728	NKX3-1	ENST00000511616.1|CTD-2143L24.1|ENSG00000249781.2|CTD-2143L24.1
hg19_v2_chr6_-_135271219_135271257	0.0475913	NKX3-1	ENST00000367847.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1 	ENST00000367845.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr5_-_138211051_138211072	0.0475811	NKX3-1	ENST00000518785.1|LRRTM2|ENSG00000146006.7|leucine rich repeat transmembrane neuronal 2
hg19_v2_chrX_-_24665353_24665382	0.0454196	NKX3-1	ENST00000379144.2|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr1_-_216978709_216978728	0.0453901	NKX3-1	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr5_-_1799932_1799960	0.0447642	NKX3-1	ENST00000382647.7|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36 	ENST00000505059.2|MRPL36|ENSG00000171421.8|mitochondrial ribosomal protein L36
hg19_v2_chr15_-_43877062_43877090	0.0445248	NKX3-1	ENST00000381885.1|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1 	ENST00000396923.3|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr15_+_44084503_44084575	0.042433	NKX3-1	ENST00000409960.2|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409646.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000594896.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000339624.5|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000409291.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000402131.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000403425.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2 	ENST00000430901.1|SERF2|ENSG00000140264.15|small EDRK-rich factor 2
hg19_v2_chr5_+_64920826_64920891	0.0419409	NKX3-1	ENST00000438419.2|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000231526.4|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000505553.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000545191.1|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13
hg19_v2_chr18_-_3845321_3845371	0.0417917	NKX3-1	ENST00000539435.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400147.2|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr5_+_75904918_75904947	0.0414176	NKX3-1	ENST00000514001.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2 	ENST00000396234.3|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2 	ENST00000509074.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr4_-_138453606_138453673	0.0410932	NKX3-1	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr4_+_88529681_88529681	0.0401402	NKX3-1	ENST00000399271.1|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chrX_+_71353499_71353499	0.0393793	NKX3-1	ENST00000373677.1|NHSL2|ENSG00000204131.6|NHS-like 2
hg19_v2_chr2_-_207082624_207082640	0.0382196	NKX3-1	ENST00000458440.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1 	ENST00000437420.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr1_+_173793777_173793829	0.0374151	NKX3-1	ENST00000239457.5|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr2_+_27760247_27760261	0.0367042	NKX3-1	ENST00000447166.1|AC109829.1|ENSG00000233438.1|Uncharacterized protein
hg19_v2_chr1_-_110155671_110155685	0.0365862	NKX3-1	ENST00000351050.3|GNAT2|ENSG00000134183.7|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2
hg19_v2_chr20_+_2821366_2821410	0.0364616	NKX3-1	ENST00000453689.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae) 	ENST00000417508.1|VPS16|ENSG00000215305.5|vacuolar protein sorting 16 homolog (S. cerevisiae)
hg19_v2_chr5_+_75904950_75904972	0.035834	NKX3-1	ENST00000502745.1|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chrX_-_102757802_102757810	0.0357223	NKX3-1	ENST00000372633.1|RAB40A|ENSG00000172476.3|RAB40A, member RAS oncogene family
hg19_v2_chr9_+_706842_706889	0.0347378	NKX3-1	ENST00000382293.3|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr1_+_222913009_222913031	0.033396	NKX3-1	ENST00000456298.1|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B
hg19_v2_chr9_+_97766409_97766428	0.0320443	NKX3-1	ENST00000425634.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr12_+_70219052_70219096	0.0305621	NKX3-1	ENST00000552032.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like 	ENST00000547771.2|MYRFL|ENSG00000166268.6|myelin regulatory factor-like
hg19_v2_chr13_+_111766897_111766966	0.0301133	NKX3-1	ENST00000317133.5|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chrX_-_114253536_114253561	0.0288422	NKX3-1	ENST00000371936.1|IL13RA2|ENSG00000123496.3|interleukin 13 receptor, alpha 2
hg19_v2_chr12_+_109569155_109569172	0.0286447	NKX3-1	ENST00000539864.1|ACACB|ENSG00000076555.11|acetyl-CoA carboxylase beta
hg19_v2_chr3_+_93698974_93699039	0.0285444	NKX3-1	ENST00000535334.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000478400.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000303097.7|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000394222.3|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000471138.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B 	ENST00000539730.1|ARL13B|ENSG00000169379.11|ADP-ribosylation factor-like 13B
hg19_v2_chr14_+_97925151_97925207	0.0284786	NKX3-1	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr7_-_7680601_7680632	0.0283109	NKX3-1	ENST00000396682.2|RPA3|ENSG00000106399.7|replication protein A3, 14kDa
hg19_v2_chr3_-_15106747_15106842	0.0282961	NKX3-1	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr20_-_50722183_50722217	0.0276865	NKX3-1	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr4_+_155702496_155702657	0.0269566	NKX3-1	ENST00000510397.1|RBM46|ENSG00000151962.3|RNA binding motif protein 46
hg19_v2_chr10_+_114133773_114133784	0.0265677	NKX3-1	ENST00000354655.4|ACSL5|ENSG00000197142.6|acyl-CoA synthetase long-chain family member 5
hg19_v2_chr13_+_24144509_24144589	0.0264007	NKX3-1	ENST00000248484.4|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr12_-_10562356_10562356	0.0261864	NKX3-1	ENST00000309384.1|KLRC4|ENSG00000183542.4|killer cell lectin-like receptor subfamily C, member 4
hg19_v2_chr19_+_58144529_58144584	0.0242241	NKX3-1	ENST00000347302.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000254182.7|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000391703.3|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000541801.1|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000299871.5|ZNF211|ENSG00000121417.9|zinc finger protein 211 	ENST00000544273.1|ZNF211|ENSG00000121417.9|zinc finger protein 211
hg19_v2_chr19_+_58144589_58144603	0.024057	NKX3-1	ENST00000240731.4|ZNF211|ENSG00000121417.9|zinc finger protein 211
hg19_v2_chr11_-_101454234_101454255	0.0235865	NKX3-1	ENST00000348423.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000360497.4|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6 	ENST00000532133.1|TRPC6|ENSG00000137672.8|transient receptor potential cation channel, subfamily C, member 6
hg19_v2_chr2_+_113672770_113672770	0.0235258	NKX3-1	ENST00000311328.2|IL37|ENSG00000125571.5|interleukin 37
hg19_v2_chr1_-_39339777_39339777	0.0229006	NKX3-1	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr20_-_45318051_45318118	0.0227002	NKX3-1	ENST00000372102.3|TP53RK|ENSG00000172315.5|TP53 regulating kinase
hg19_v2_chr14_-_39417473_39417480	0.0226609	NKX3-1	ENST00000553932.1|LINC00639|ENSG00000259070.1|long intergenic non-protein coding RNA 639
hg19_v2_chr12_+_113416340_113416363	0.022531	NKX3-1	ENST00000552756.1|OAS2|ENSG00000111335.8|2'-5'-oligoadenylate synthetase 2, 69/71kDa
hg19_v2_chr1_+_173793641_173793739	0.0220563	NKX3-1	ENST00000361951.4|DARS2|ENSG00000117593.8|aspartyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr17_-_29641084_29641103	0.0211199	NKX3-1	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr1_-_203151933_203151947	0.02111	NKX3-1	ENST00000404436.2|CHI3L1|ENSG00000133048.8|chitinase 3-like 1 (cartilage glycoprotein-39)
hg19_v2_chr16_+_22501658_22501658	0.0209255	NKX3-1	ENST00000415833.2|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chrX_-_138287168_138287192	0.020809	NKX3-1	ENST00000436198.1|FGF13|ENSG00000129682.9|fibroblast growth factor 13
hg19_v2_chr6_-_116833500_116833511	0.02056	NKX3-1	ENST00000356128.4|TRAPPC3L|ENSG00000173626.5|trafficking protein particle complex 3-like
hg19_v2_chr7_+_110731062_110731155	0.0205256	NKX3-1	ENST00000308478.5|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000451085.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000422987.3|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000421101.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3
hg19_v2_chr17_+_41150793_41150826	0.0199824	NKX3-1	ENST00000586277.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr17_-_29641104_29641130	0.0194927	NKX3-1	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr22_-_36761081_36761157	0.0194658	NKX3-1	ENST00000456729.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle 	ENST00000401701.1|MYH9|ENSG00000100345.16|myosin, heavy chain 9, non-muscle
hg19_v2_chr17_+_68100989_68101026	0.0185305	NKX3-1	ENST00000585558.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392670.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr16_+_28985542_28985642	0.0181704	NKX3-1	ENST00000567771.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila) 	ENST00000568388.1|SPNS1|ENSG00000169682.13|spinster homolog 1 (Drosophila)
hg19_v2_chr3_-_18480173_18480189	0.0180068	NKX3-1	ENST00000414509.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr5_+_149877334_149877354	0.0174199	NKX3-1	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr9_+_134065519_134065535	0.0173069	NKX3-1	ENST00000531600.1|NUP214|ENSG00000126883.12|nucleoporin 214kDa
hg19_v2_chr9_-_73477826_73477993	0.0167521	NKX3-1	ENST00000396285.1|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000396292.4|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000396280.5|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000358082.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000408909.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377097.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr12_+_96883347_96883400	0.0167395	NKX3-1	ENST00000524981.4|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55 	ENST00000298953.3|C12orf55|ENSG00000188596.5|chromosome 12 open reading frame 55
hg19_v2_chr12_-_118628350_118628371	0.016484	NKX3-1	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr1_-_21377447_21377487	0.016267	NKX3-1	ENST00000374937.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000264211.8|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr12_-_57039739_57039798	0.0151654	NKX3-1	ENST00000552959.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000551020.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000553007.2|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552919.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552104.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000262030.3|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr3_+_119013185_119013306	0.0146691	NKX3-1	ENST00000264245.4|ARHGAP31|ENSG00000031081.6|Rho GTPase activating protein 31
hg19_v2_chr12_+_96252706_96252789	0.0145892	NKX3-1	ENST00000266735.5|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F 	ENST00000553192.1|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F 	ENST00000552085.1|SNRPF|ENSG00000139343.6|small nuclear ribonucleoprotein polypeptide F
hg19_v2_chr4_-_90756769_90756846	0.0139198	NKX3-1	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_+_59250815_59250848	0.0131513	NKX3-1	ENST00000544621.1|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135 	ENST00000419531.2|RP4-794H19.2|ENSG00000234807.4|long intergenic non-protein coding RNA 1135
hg19_v2_chr17_+_66521936_66522026	0.012945	NKX3-1	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chrX_-_19688475_19688492	0.0120565	NKX3-1	ENST00000541422.1|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr11_+_8040739_8040815	0.0117067	NKX3-1	ENST00000534099.1|TUB|ENSG00000166402.4|tubby bipartite transcription factor
hg19_v2_chr1_+_27114589_27114712	0.0116511	NKX3-1	ENST00000431541.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000449950.2|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V 	ENST00000374145.1|PIGV|ENSG00000060642.6|phosphatidylinositol glycan anchor biosynthesis, class V
hg19_v2_chr6_-_135271260_135271272	0.0116067	NKX3-1	ENST00000265605.2|ALDH8A1|ENSG00000118514.9|aldehyde dehydrogenase 8 family, member A1
hg19_v2_chr6_+_43603552_43603563	0.0109456	NKX3-1	ENST00000372171.4|MAD2L1BP|ENSG00000124688.9|MAD2L1 binding protein
hg19_v2_chr5_-_77072085_77072139	0.00983972	NKX3-1	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr1_+_151372010_151372055	0.00980303	NKX3-1	ENST00000290541.6|PSMB4|ENSG00000159377.6|proteasome (prosome, macropain) subunit, beta type, 4
hg19_v2_chr7_-_2883928_2883993	0.00978825	NKX3-1	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr11_-_71823796_71823826	0.00943652	NKX3-1	ENST00000545680.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000543587.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000538393.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535234.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000227618.4|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000535503.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr4_+_17579110_17579130	0.00919684	NKX3-1	ENST00000606142.1|LAP3|ENSG00000002549.8|leucine aminopeptidase 3
hg19_v2_chr1_+_218683438_218683438	0.00898342	NKX3-1	ENST00000443836.1|C1orf143|ENSG00000228208.2|chromosome 1 open reading frame 143
hg19_v2_chr7_+_142374104_142374104	0.00883271	NKX3-1	ENST00000604952.1|MTRNR2L6|ENSG00000270672.1|MT-RNR2-like 6
hg19_v2_chr7_-_77325545_77325591	0.00880504	NKX3-1	ENST00000447009.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000416650.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000440088.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000430801.1|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1 	ENST00000398043.2|RSBN1L-AS1|ENSG00000214293.4|RSBN1L antisense RNA 1
hg19_v2_chr3_-_18480260_18480269	0.00870919	NKX3-1	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr4_+_37962018_37962056	0.00829263	NKX3-1	ENST00000504686.1|PTTG2|ENSG00000250254.1|pituitary tumor-transforming 2
hg19_v2_chr15_-_55563072_55563135	0.00783644	NKX3-1	ENST00000567380.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000565972.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family 	ENST00000569493.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chrX_-_47341928_47342010	0.00675307	NKX3-1	ENST00000313116.7|ZNF41|ENSG00000147124.8|zinc finger protein 41
hg19_v2_chr15_-_43876702_43876702	0.00605026	NKX3-1	ENST00000348806.6|PPIP5K1|ENSG00000168781.17|diphosphoinositol pentakisphosphate kinase 1
hg19_v2_chr9_-_104145795_104145806	0.00583046	NKX3-1	ENST00000259407.2|BAAT|ENSG00000136881.7|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)
hg19_v2_chr17_+_67498295_67498333	0.00579345	NKX3-1	ENST00000589295.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr9_+_117350009_117350111	0.00563655	NKX3-1	ENST00000374050.3|ATP6V1G1|ENSG00000136888.6|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
hg19_v2_chr8_-_97247759_97247862	0.00557155	NKX3-1	ENST00000518406.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000523920.1|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein 	ENST00000287022.5|UQCRB|ENSG00000156467.5|ubiquinol-cytochrome c reductase binding protein
hg19_v2_chr16_+_57406368_57406392	0.00541519	NKX3-1	ENST00000006053.6|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1 	ENST00000563383.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr15_-_58571445_58571478	0.00466655	NKX3-1	ENST00000558231.1|ALDH1A2|ENSG00000128918.10|aldehyde dehydrogenase 1 family, member A2
hg19_v2_chr4_-_90757364_90757396	0.00378355	NKX3-1	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr8_-_135652051_135652123	0.00284857	NKX3-1	ENST00000522257.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr2_+_64069016_64069039	0.00158334	NKX3-1	ENST00000488245.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr13_+_24883703_24883718	0.00119935	NKX3-1	ENST00000332018.4|C1QTNF9|ENSG00000240654.2|C1q and tumor necrosis factor related protein 9
hg19_v2_chr4_-_4228616_4228616	0.000466783	NKX3-1	ENST00000296358.4|OTOP1|ENSG00000163982.5|otopetrin 1
hg19_v2_chr14_-_68066975_68067027	0.000417246	NKX3-1	ENST00000559581.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000560722.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000559415.1|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H 	ENST00000216452.4|PIGH|ENSG00000100564.4|phosphatidylinositol glycan anchor biosynthesis, class H
hg19_v2_chr8_-_16035454_16035497	0.000323292	NKX3-1	ENST00000355282.2|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chr4_+_15376165_15376178	0.000108525	NKX3-1	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr14_-_74551172_74551196	8.51252e-05	NKX3-1	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
