hg19_v2_chr2_+_114163945_114163973	0.733672	NKX2-3	ENST00000453673.3|IGKV1OR2-108|ENSG00000231292.5|immunoglobulin kappa variable 1/OR2-108 (non-functional)
hg19_v2_chrX_+_9502971_9502984	0.62603	NKX2-3	ENST00000452824.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr13_-_45048386_45048415	0.613941	NKX2-3	ENST00000472477.1|TSC22D1|ENSG00000102804.10|TSC22 domain family, member 1
hg19_v2_chr12_+_111051902_111051975	0.433087	NKX2-3	ENST00000397655.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000471804.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000377654.3|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000397659.4|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chrX_-_108868390_108868407	0.420686	NKX2-3	ENST00000372101.2|KCNE1L|ENSG00000176076.6|KCNE1-like
hg19_v2_chr3_+_186743261_186743277	0.419294	NKX2-3	ENST00000423451.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 	ENST00000446170.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr12_-_123565834_123565880	0.388887	NKX2-3	ENST00000546049.1|PITPNM2|ENSG00000090975.8|phosphatidylinositol transfer protein, membrane-associated 2
hg19_v2_chr6_-_10435032_10435107	0.365166	NKX2-3	ENST00000491317.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000496285.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000479822.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518 	ENST00000487130.1|LINC00518|ENSG00000183674.7|long intergenic non-protein coding RNA 518
hg19_v2_chr12_+_111051832_111051873	0.352914	NKX2-3	ENST00000550703.2|TCTN1|ENSG00000204852.11|tectonic family member 1 	ENST00000551590.1|TCTN1|ENSG00000204852.11|tectonic family member 1
hg19_v2_chr2_-_98972468_98972468	0.347787	NKX2-3	ENST00000454230.1|AC092675.3|ENSG00000222000.3|Uncharacterized protein
hg19_v2_chr14_+_64565442_64565481	0.347723	NKX2-3	ENST00000553308.1|SYNE2|ENSG00000054654.11|spectrin repeat containing, nuclear envelope 2
hg19_v2_chr22_+_45714361_45714374	0.330019	NKX2-3	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr6_+_8652370_8652515	0.327122	NKX2-3	ENST00000503668.1|HULC|ENSG00000251164.1|hepatocellular carcinoma up-regulated long non-coding RNA
hg19_v2_chr2_-_37501692_37501747	0.325795	NKX2-3	ENST00000443977.1|PRKD3|ENSG00000115825.5|protein kinase D3
hg19_v2_chr2_+_64073187_64073217	0.298411	NKX2-3	ENST00000491621.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr1_-_46642154_46642174	0.291796	NKX2-3	ENST00000540385.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr16_-_79804394_79804433	0.291257	NKX2-3	ENST00000567993.1|RP11-345M22.2|ENSG00000261390.1|RP11-345M22.2
hg19_v2_chr12_+_25205155_25205214	0.287949	NKX2-3	ENST00000550945.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr1_-_205391178_205391214	0.281868	NKX2-3	ENST00000367153.4|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367151.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000391936.2|LEMD1|ENSG00000186007.5|LEM domain containing 1 	ENST00000367149.3|LEMD1|ENSG00000186007.5|LEM domain containing 1
hg19_v2_chr16_-_18911366_18911366	0.280527	NKX2-3	ENST00000565224.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr11_-_46638720_46638788	0.272834	NKX2-3	ENST00000326737.3|HARBI1|ENSG00000180423.4|harbinger transposase derived 1
hg19_v2_chr1_-_26147149_26147288	0.272592	NKX2-3	ENST00000536896.1|AL020996.1|ENSG00000223474.2|Uncharacterized protein
hg19_v2_chr7_+_56032652_56032669	0.271211	NKX2-3	ENST00000437587.1|GBAS|ENSG00000146729.5|glioblastoma amplified sequence
hg19_v2_chr14_+_36295504_36295580	0.263962	NKX2-3	ENST00000216807.7|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr2_+_204103663_204103730	0.262099	NKX2-3	ENST00000356079.4|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1 	ENST00000429815.2|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr5_+_150404904_150404928	0.25753	NKX2-3	ENST00000521632.1|GPX3|ENSG00000211445.7|glutathione peroxidase 3 (plasma)
hg19_v2_chr18_-_25616519_25616549	0.252601	NKX2-3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr2_+_71357744_71357791	0.248479	NKX2-3	ENST00000498451.2|MPHOSPH10|ENSG00000124383.4|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
hg19_v2_chr10_+_13203543_13203587	0.246806	NKX2-3	ENST00000378714.3|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000479669.1|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10 	ENST00000484800.2|MCM10|ENSG00000065328.12|minichromosome maintenance complex component 10
hg19_v2_chr5_-_114631958_114631990	0.244377	NKX2-3	ENST00000395557.4|CCDC112|ENSG00000164221.8|coiled-coil domain containing 112
hg19_v2_chr2_-_178128528_178128574	0.239755	NKX2-3	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr12_+_122018697_122018755	0.237723	NKX2-3	ENST00000541574.1|RP13-941N14.1|ENSG00000256742.1|RP13-941N14.1
hg19_v2_chr18_-_64271316_64271334	0.235103	NKX2-3	ENST00000540086.1|CDH19|ENSG00000071991.4|cadherin 19, type 2 	ENST00000580157.1|CDH19|ENSG00000071991.4|cadherin 19, type 2
hg19_v2_chr4_+_76439649_76439662	0.225527	NKX2-3	ENST00000507557.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr3_-_122134882_122134951	0.220743	NKX2-3	ENST00000330689.4|WDR5B|ENSG00000196981.2|WD repeat domain 5B
hg19_v2_chr12_-_124419531_124419531	0.212627	NKX2-3	ENST00000514254.2|DNAH10OS|ENSG00000250091.2|dynein, axonemal, heavy chain 10 opposite strand
hg19_v2_chr5_-_159846066_159846095	0.207772	NKX2-3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr5_-_54988448_54988545	0.203271	NKX2-3	ENST00000503817.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9 	ENST00000512595.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chr1_+_152943122_152943142	0.197607	NKX2-3	ENST00000328051.2|SPRR4|ENSG00000184148.3|small proline-rich protein 4
hg19_v2_chr1_+_205682497_205682497	0.197239	NKX2-3	ENST00000598338.1|AC119673.1|ENSG00000268313.1|AC119673.1
hg19_v2_chr2_+_204103733_204103758	0.196593	NKX2-3	ENST00000443941.1|CYP20A1|ENSG00000119004.10|cytochrome P450, family 20, subfamily A, polypeptide 1
hg19_v2_chr5_-_42887494_42887508	0.19411	NKX2-3	ENST00000514218.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr2_-_188419078_188419195	0.191718	NKX2-3	ENST00000437725.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000409676.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000339091.4|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000420747.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v2_chr14_+_36295638_36295652	0.191179	NKX2-3	ENST00000543183.1|BRMS1L|ENSG00000100916.9|breast cancer metastasis-suppressor 1-like
hg19_v2_chr20_-_33539655_33539680	0.190141	NKX2-3	ENST00000451957.2|GSS|ENSG00000100983.5|glutathione synthetase
hg19_v2_chr8_-_99954788_99954802	0.189645	NKX2-3	ENST00000523601.1|STK3|ENSG00000104375.11|serine/threonine kinase 3
hg19_v2_chr6_-_46138676_46138726	0.188449	NKX2-3	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chrX_-_16730984_16731065	0.186537	NKX2-3	ENST00000380241.3|CTPS2|ENSG00000047230.10|CTP synthase 2
hg19_v2_chr3_+_113775594_113775666	0.183551	NKX2-3	ENST00000479882.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000493014.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr4_-_104020968_104020997	0.183335	NKX2-3	ENST00000504285.1|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2
hg19_v2_chr18_-_51750948_51751059	0.183089	NKX2-3	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr19_+_15751689_15751715	0.177955	NKX2-3	ENST00000586182.2|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000591058.1|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3 	ENST00000221307.8|CYP4F3|ENSG00000186529.10|cytochrome P450, family 4, subfamily F, polypeptide 3
hg19_v2_chr7_-_29186008_29186172	0.176966	NKX2-3	ENST00000396276.3|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like 	ENST00000265394.5|CPVL|ENSG00000106066.9|carboxypeptidase, vitellogenic-like
hg19_v2_chr7_-_38948774_38948829	0.176516	NKX2-3	ENST00000395969.2|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000414632.1|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae) 	ENST00000310301.4|VPS41|ENSG00000006715.11|vacuolar protein sorting 41 homolog (S. cerevisiae)
hg19_v2_chr10_-_70092671_70092806	0.176011	NKX2-3	ENST00000358769.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000432941.1|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing 	ENST00000495025.2|PBLD|ENSG00000108187.11|phenazine biosynthesis-like protein domain containing
hg19_v2_chr7_+_141463897_141463897	0.171489	NKX2-3	ENST00000247879.2|TAS2R3|ENSG00000127362.2|taste receptor, type 2, member 3
hg19_v2_chr19_+_18485509_18485556	0.169382	NKX2-3	ENST00000597765.1|GDF15|ENSG00000130513.6|growth differentiation factor 15
hg19_v2_chr11_+_65266507_65266522	0.166626	NKX2-3	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr12_-_2966193_2966213	0.164503	NKX2-3	ENST00000382678.3|AC005841.1|ENSG00000206044.3|Uncharacterized protein ENSP00000372125
hg19_v2_chr6_+_134758827_134758863	0.164285	NKX2-3	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr8_-_17555164_17555204	0.16134	NKX2-3	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr4_-_75695366_75695366	0.161123	NKX2-3	ENST00000512743.1|BTC|ENSG00000174808.7|betacellulin
hg19_v2_chr15_+_58702742_58702777	0.160374	NKX2-3	ENST00000356113.6|LIPC|ENSG00000166035.6|lipase, hepatic 	ENST00000414170.3|LIPC|ENSG00000166035.6|lipase, hepatic
hg19_v2_chr5_+_150051149_150051323	0.159503	NKX2-3	ENST00000523553.1|MYOZ3|ENSG00000164591.9|myozenin 3
hg19_v2_chr14_+_67831576_67831615	0.159151	NKX2-3	ENST00000555876.1|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr4_+_48343339_48343414	0.15884	NKX2-3	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr11_-_65363259_65363279	0.15883	NKX2-3	ENST00000342202.4|KCNK7|ENSG00000173338.8|potassium channel, subfamily K, member 7
hg19_v2_chr10_-_76868931_76868980	0.158329	NKX2-3	ENST00000372700.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000473072.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000491677.2|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000607131.1|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13 	ENST00000372702.3|DUSP13|ENSG00000079393.16|dual specificity phosphatase 13
hg19_v2_chr3_-_69062764_69062788	0.157861	NKX2-3	ENST00000295571.5|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr4_-_36246060_36246167	0.156092	NKX2-3	ENST00000303965.4|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr13_-_50018140_50018221	0.155911	NKX2-3	ENST00000410043.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like 	ENST00000347776.5|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr2_+_242312264_242312376	0.155419	NKX2-3	ENST00000445489.1|FARP2|ENSG00000006607.9|FERM, RhoGEF and pleckstrin domain protein 2
hg19_v2_chr12_-_42719885_42719926	0.154942	NKX2-3	ENST00000552673.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000266529.3|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1 	ENST00000552235.1|ZCRB1|ENSG00000139168.3|zinc finger CCHC-type and RNA binding motif 1
hg19_v2_chr10_-_73976884_73976894	0.152991	NKX2-3	ENST00000317126.4|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1 	ENST00000545550.1|ASCC1|ENSG00000138303.13|activating signal cointegrator 1 complex subunit 1
hg19_v2_chr12_-_120315074_120315097	0.152754	NKX2-3	ENST00000261833.7|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21) 	ENST00000392521.2|CIT|ENSG00000122966.9|citron (rho-interacting, serine/threonine kinase 21)
hg19_v2_chr3_-_101039402_101039429	0.152233	NKX2-3	ENST00000193391.7|IMPG2|ENSG00000081148.11|interphotoreceptor matrix proteoglycan 2
hg19_v2_chr14_-_69263043_69263190	0.151293	NKX2-3	ENST00000408913.2|ZFP36L1|ENSG00000185650.8|ZFP36 ring finger protein-like 1
hg19_v2_chr12_+_41136144_41136158	0.150271	NKX2-3	ENST00000548005.1|CNTN1|ENSG00000018236.10|contactin 1 	ENST00000552248.1|CNTN1|ENSG00000018236.10|contactin 1
hg19_v2_chr10_+_35464513_35464631	0.150233	NKX2-3	ENST00000494479.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463314.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000342105.3|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000495301.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000463960.1|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chrX_-_134049262_134049297	0.148904	NKX2-3	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr2_-_188419200_188419224	0.14878	NKX2-3	ENST00000233156.3|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000426055.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000453013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 	ENST00000417013.1|TFPI|ENSG00000003436.10|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)
hg19_v2_chr7_-_76829125_76829143	0.148103	NKX2-3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr3_-_123512688_123512717	0.144874	NKX2-3	ENST00000475616.1|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chrX_+_37865804_37865842	0.143952	NKX2-3	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr2_+_64069240_64069332	0.142424	NKX2-3	ENST00000497883.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr4_-_100242549_100242564	0.142141	NKX2-3	ENST00000305046.8|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide 	ENST00000394887.3|ADH1B|ENSG00000196616.8|alcohol dehydrogenase 1B (class I), beta polypeptide
hg19_v2_chr6_-_32731243_32731295	0.141433	NKX2-3	ENST00000427449.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000411527.1|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr5_-_180688105_180688162	0.138708	NKX2-3	ENST00000327767.4|TRIM52|ENSG00000183718.4|tripartite motif containing 52
hg19_v2_chr12_-_42878101_42878134	0.137898	NKX2-3	ENST00000552108.1|PRICKLE1|ENSG00000139174.6|prickle homolog 1 (Drosophila)
hg19_v2_chr12_-_104531945_104531996	0.137891	NKX2-3	ENST00000551446.1|NFYB|ENSG00000120837.3|nuclear transcription factor Y, beta
hg19_v2_chr3_-_131753830_131753844	0.136766	NKX2-3	ENST00000429747.1|CPNE4|ENSG00000196353.7|copine IV
hg19_v2_chr9_-_75488984_75489052	0.135324	NKX2-3	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr4_-_52883786_52883786	0.135208	NKX2-3	ENST00000343457.3|LRRC66|ENSG00000188993.3|leucine rich repeat containing 66
hg19_v2_chr22_+_45714672_45714710	0.134861	NKX2-3	ENST00000424557.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr4_-_90758227_90758379	0.134491	NKX2-3	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chrX_-_108976410_108976445	0.134427	NKX2-3	ENST00000504980.1|ACSL4|ENSG00000068366.15|acyl-CoA synthetase long-chain family member 4
hg19_v2_chr1_+_174669653_174669663	0.133772	NKX2-3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr5_-_132200477_132200477	0.133054	NKX2-3	ENST00000296875.2|GDF9|ENSG00000164404.4|growth differentiation factor 9
hg19_v2_chr1_+_174670143_174670160	0.130986	NKX2-3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr11_-_71752838_71752915	0.129989	NKX2-3	ENST00000537930.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr18_+_43684298_43684304	0.129739	NKX2-3	ENST00000282058.6|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr12_+_42719947_42719983	0.128111	NKX2-3	ENST00000395580.3|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000337898.6|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000358314.7|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000395568.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000256678.8|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000449194.2|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000552761.1|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000317560.9|PPHLN1|ENSG00000134283.13|periphilin 1 	ENST00000432191.2|PPHLN1|ENSG00000134283.13|periphilin 1
hg19_v2_chr4_-_90758118_90758150	0.127289	NKX2-3	ENST00000420646.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_+_43824669_43824684	0.127231	NKX2-3	ENST00000372462.1|CDC20|ENSG00000117399.9|cell division cycle 20
hg19_v2_chr14_+_55494323_55494345	0.125863	NKX2-3	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr12_-_102591604_102591623	0.125691	NKX2-3	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
hg19_v2_chr3_+_25831567_25831602	0.12519	NKX2-3	ENST00000280701.3|OXSM|ENSG00000151093.3|3-oxoacyl-ACP synthase, mitochondrial 	ENST00000420173.2|OXSM|ENSG00000151093.3|3-oxoacyl-ACP synthase, mitochondrial
hg19_v2_chr5_-_110848189_110848240	0.125084	NKX2-3	ENST00000296632.3|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000512160.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000509887.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr15_+_69452959_69452987	0.12492	NKX2-3	ENST00000261858.2|GLCE|ENSG00000138604.5|glucuronic acid epimerase
hg19_v2_chr14_-_50154921_50155140	0.12377	NKX2-3	ENST00000553805.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000554396.1|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000216367.5|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit 	ENST00000539565.2|POLE2|ENSG00000100479.8|polymerase (DNA directed), epsilon 2, accessory subunit
hg19_v2_chr5_+_112312399_112312414	0.123211	NKX2-3	ENST00000515408.1|DCP2|ENSG00000172795.11|decapping mRNA 2 	ENST00000513585.1|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr3_+_145782358_145782358	0.12321	NKX2-3	ENST00000422482.1|AC107021.1|ENSG00000232013.1|HCG1786590; PRO2533; Uncharacterized protein
hg19_v2_chr2_-_36825281_36825342	0.122245	NKX2-3	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr9_-_138391692_138391741	0.1221	NKX2-3	ENST00000429260.2|C9orf116|ENSG00000160345.8|chromosome 9 open reading frame 116
hg19_v2_chr4_+_189321881_189321895	0.121934	NKX2-3	ENST00000512839.1|LINC01060|ENSG00000249378.1|long intergenic non-protein coding RNA 1060 	ENST00000513313.1|LINC01060|ENSG00000249378.1|long intergenic non-protein coding RNA 1060
hg19_v2_chrX_+_69509870_69509908	0.120627	NKX2-3	ENST00000374388.3|KIF4A|ENSG00000090889.10|kinesin family member 4A
hg19_v2_chr14_+_100531738_100531766	0.120142	NKX2-3	ENST00000555706.1|EVL|ENSG00000196405.8|Enah/Vasp-like
hg19_v2_chr9_+_131447342_131447362	0.118657	NKX2-3	ENST00000409104.3|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr14_-_90798273_90798323	0.117145	NKX2-3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr16_+_56969284_56969314	0.117134	NKX2-3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr2_+_202125219_202125230	0.116635	NKX2-3	ENST00000323492.7|CASP8|ENSG00000064012.17|caspase 8, apoptosis-related cysteine peptidase
hg19_v2_chr19_-_1401486_1401570	0.116597	NKX2-3	ENST00000252288.2|GAMT|ENSG00000130005.7|guanidinoacetate N-methyltransferase 	ENST00000447102.3|GAMT|ENSG00000130005.7|guanidinoacetate N-methyltransferase
hg19_v2_chr3_+_182971018_182971059	0.116151	NKX2-3	ENST00000326505.3|B3GNT5|ENSG00000176597.7|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
hg19_v2_chr7_+_6071007_6071007	0.115582	NKX2-3	ENST00000409061.1|ANKRD61|ENSG00000157999.5|ankyrin repeat domain 61
hg19_v2_chr4_+_139230865_139230904	0.11527	NKX2-3	ENST00000502757.1|LINC00499|ENSG00000251372.1|long intergenic non-protein coding RNA 499 	ENST00000507145.1|LINC00499|ENSG00000251372.1|long intergenic non-protein coding RNA 499 	ENST00000515282.1|LINC00499|ENSG00000251372.1|long intergenic non-protein coding RNA 499 	ENST00000510736.1|LINC00499|ENSG00000251372.1|long intergenic non-protein coding RNA 499
hg19_v2_chr17_+_61905058_61905238	0.11325	NKX2-3	ENST00000375812.4|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000581882.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr1_+_152730499_152730507	0.113222	NKX2-3	ENST00000368773.1|KPRP|ENSG00000203786.5|keratinocyte proline-rich protein
hg19_v2_chrX_-_106362013_106362066	0.113068	NKX2-3	ENST00000372487.1|RBM41|ENSG00000089682.12|RNA binding motif protein 41 	ENST00000372479.3|RBM41|ENSG00000089682.12|RNA binding motif protein 41 	ENST00000203616.8|RBM41|ENSG00000089682.12|RNA binding motif protein 41
hg19_v2_chr3_+_23847432_23847512	0.11276	NKX2-3	ENST00000346855.3|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chr22_-_21213676_21213705	0.112694	NKX2-3	ENST00000449120.1|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha
hg19_v2_chr17_+_61904766_61904827	0.111342	NKX2-3	ENST00000581842.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000582130.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000584320.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000585123.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5 	ENST00000580864.1|PSMC5|ENSG00000087191.8|proteasome (prosome, macropain) 26S subunit, ATPase, 5
hg19_v2_chr7_-_86849836_86849866	0.110789	NKX2-3	ENST00000455575.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr12_+_116985896_116985920	0.110432	NKX2-3	ENST00000547114.1|RP11-809C9.2|ENSG00000258102.1|RP11-809C9.2
hg19_v2_chr4_-_39034542_39034578	0.109808	NKX2-3	ENST00000344606.6|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr2_+_64069459_64069579	0.10925	NKX2-3	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr22_-_30814469_30814469	0.107771	NKX2-3	ENST00000598426.1|KIAA1658|ENSG00000268538.1|KIAA1658
hg19_v2_chr3_-_180397256_180397301	0.106871	NKX2-3	ENST00000442201.2|CCDC39|ENSG00000145075.7|coiled-coil domain containing 39
hg19_v2_chr4_-_120550146_120550201	0.106098	NKX2-3	ENST00000354960.3|PDE5A|ENSG00000138735.11|phosphodiesterase 5A, cGMP-specific
hg19_v2_chr7_-_130353553_130353598	0.1059	NKX2-3	ENST00000330992.7|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2 	ENST00000445977.2|COPG2|ENSG00000158623.10|coatomer protein complex, subunit gamma 2
hg19_v2_chr5_-_142814241_142814278	0.103879	NKX2-3	ENST00000504572.1|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chr5_+_138210919_138211157	0.103455	NKX2-3	ENST00000522013.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520260.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523298.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000520865.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519634.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517533.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000523685.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519768.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000517656.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521683.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000521640.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa 	ENST00000519116.1|CTNNA1|ENSG00000044115.16|catenin (cadherin-associated protein), alpha 1, 102kDa
hg19_v2_chr4_-_39033963_39034047	0.103428	NKX2-3	ENST00000381938.3|TMEM156|ENSG00000121895.7|transmembrane protein 156
hg19_v2_chr3_+_113775576_113775592	0.103009	NKX2-3	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr13_-_50018241_50018277	0.102289	NKX2-3	ENST00000409308.1|CAB39L|ENSG00000102547.14|calcium binding protein 39-like
hg19_v2_chr2_+_64068844_64068997	0.102241	NKX2-3	ENST00000337130.5|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr3_+_57094469_57094469	0.101829	NKX2-3	ENST00000334325.1|SPATA12|ENSG00000186451.1|spermatogenesis associated 12
hg19_v2_chr11_-_75017734_75017755	0.101673	NKX2-3	ENST00000532525.1|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr10_-_27529486_27529497	0.10106	NKX2-3	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chrX_-_21776281_21776299	0.100458	NKX2-3	ENST00000379494.3|SMPX|ENSG00000091482.5|small muscle protein, X-linked
hg19_v2_chr12_+_19389814_19389872	0.0981885	NKX2-3	ENST00000536974.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr1_-_212965104_212965141	0.0972218	NKX2-3	ENST00000422588.2|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366975.6|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366977.3|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366976.1|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component
hg19_v2_chr11_+_17599811_17599811	0.0965548	NKX2-3	ENST00000342528.2|OTOG|ENSG00000188162.6|otogelin
hg19_v2_chr16_-_66952779_66952887	0.0959406	NKX2-3	ENST00000570262.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000394055.3|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000299752.4|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin
hg19_v2_chr5_-_110848253_110848288	0.0957287	NKX2-3	ENST00000505803.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4 	ENST00000502322.1|STARD4|ENSG00000164211.8|StAR-related lipid transfer (START) domain containing 4
hg19_v2_chr16_+_23765948_23765976	0.0953898	NKX2-3	ENST00000300113.2|CHP2|ENSG00000166869.2|calcineurin-like EF-hand protein 2
hg19_v2_chr5_-_96518907_96518997	0.0948349	NKX2-3	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr12_+_57390745_57390745	0.0942904	NKX2-3	ENST00000600202.1|HBCBP|ENSG00000268162.1|HBcAg-binding protein; Uncharacterized protein
hg19_v2_chr12_+_6309963_6310022	0.0927713	NKX2-3	ENST00000382515.2|CD9|ENSG00000010278.7|CD9 molecule
hg19_v2_chr15_-_90437195_90437261	0.0923562	NKX2-3	ENST00000560940.1|AP3S2|ENSG00000157823.12|adaptor-related protein complex 3, sigma 2 subunit 	ENST00000558011.1|AP3S2|ENSG00000157823.12|adaptor-related protein complex 3, sigma 2 subunit
hg19_v2_chrX_-_49121165_49121288	0.092343	NKX2-3	ENST00000376207.4|FOXP3|ENSG00000049768.10|forkhead box P3 	ENST00000376199.2|FOXP3|ENSG00000049768.10|forkhead box P3
hg19_v2_chr4_+_76439665_76439730	0.0922311	NKX2-3	ENST00000508105.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000311638.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000380837.3|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507556.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000504190.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000507885.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000502620.1|THAP6|ENSG00000174796.8|THAP domain containing 6 	ENST00000514480.1|THAP6|ENSG00000174796.8|THAP domain containing 6
hg19_v2_chr3_-_122233723_122233797	0.09191	NKX2-3	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr18_+_32173276_32173349	0.0918007	NKX2-3	ENST00000591816.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588125.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000598334.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000588684.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000554864.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399121.5|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000595022.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000269190.7|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000399097.3|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr7_+_1609765_1609870	0.0908219	NKX2-3	ENST00000437964.1|PSMG3-AS1|ENSG00000230487.3|PSMG3 antisense RNA 1 (head to head) 	ENST00000533935.1|PSMG3-AS1|ENSG00000230487.3|PSMG3 antisense RNA 1 (head to head) 	ENST00000532358.1|PSMG3-AS1|ENSG00000230487.3|PSMG3 antisense RNA 1 (head to head) 	ENST00000524978.1|PSMG3-AS1|ENSG00000230487.3|PSMG3 antisense RNA 1 (head to head)
hg19_v2_chr7_-_80548667_80548688	0.0908138	NKX2-3	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr3_-_42623805_42623824	0.0898921	NKX2-3	ENST00000456515.1|SEC22C|ENSG00000093183.9|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
hg19_v2_chr8_-_101718991_101719023	0.0898056	NKX2-3	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr7_-_2883650_2883775	0.0896734	NKX2-3	ENST00000544127.1|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr15_-_101142362_101142395	0.0896182	NKX2-3	ENST00000559577.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000561308.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560133.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560941.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000559736.1|LINS|ENSG00000140471.12|lines homolog (Drosophila) 	ENST00000560272.1|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr2_-_172291273_172291305	0.0894163	NKX2-3	ENST00000442778.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000453846.1|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chrX_-_134049233_134049258	0.0890292	NKX2-3	ENST00000370779.4|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr6_-_150212029_150212170	0.0884448	NKX2-3	ENST00000529948.1|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000357183.4|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E 	ENST00000367363.3|RAET1E|ENSG00000164520.7|retinoic acid early transcript 1E
hg19_v2_chr19_+_50148087_50148275	0.0879921	NKX2-3	ENST00000601038.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1 	ENST00000595242.1|SCAF1|ENSG00000126461.10|SR-related CTD-associated factor 1
hg19_v2_chr12_-_53189892_53189905	0.0879886	NKX2-3	ENST00000309505.3|KRT3|ENSG00000186442.6|keratin 3 	ENST00000417996.2|KRT3|ENSG00000186442.6|keratin 3
hg19_v2_chr6_+_31126291_31126399	0.0876661	NKX2-3	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr19_-_46288917_46288971	0.0871392	NKX2-3	ENST00000537879.1|DMWD|ENSG00000185800.7|dystrophia myotonica, WD repeat containing 	ENST00000596586.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein  	ENST00000595946.1|AC011530.4|ENSG00000268434.1|Uncharacterized protein
hg19_v2_chr1_-_89488510_89488565	0.0865937	NKX2-3	ENST00000564665.1|GBP3|ENSG00000117226.7|guanylate binding protein 3 	ENST00000370481.4|GBP3|ENSG00000117226.7|guanylate binding protein 3
hg19_v2_chr1_+_202317855_202317864	0.0862718	NKX2-3	ENST00000356764.2|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr12_+_10460417_10460485	0.0860392	NKX2-3	ENST00000381908.3|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000336164.4|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1 	ENST00000350274.5|KLRD1|ENSG00000134539.12|killer cell lectin-like receptor subfamily D, member 1
hg19_v2_chr1_+_65613340_65613370	0.0852663	NKX2-3	ENST00000546702.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr16_+_68877496_68877521	0.0835588	NKX2-3	ENST00000261778.1|TANGO6|ENSG00000103047.3|transport and golgi organization 6 homolog (Drosophila)
hg19_v2_chr19_+_42746927_42746927	0.0824501	NKX2-3	ENST00000378108.1|AC006486.1|ENSG00000204957.1|AC006486.1
hg19_v2_chr12_-_122711968_122712008	0.0820749	NKX2-3	ENST00000485724.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr1_-_33116128_33116185	0.082014	NKX2-3	ENST00000436661.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000373501.2|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000341885.5|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand 	ENST00000468695.1|ZBTB8OS|ENSG00000176261.11|zinc finger and BTB domain containing 8 opposite strand
hg19_v2_chr1_+_65613217_65613331	0.0817749	NKX2-3	ENST00000545314.1|AK4|ENSG00000162433.10|adenylate kinase 4
hg19_v2_chr12_+_12966250_12966302	0.0814719	NKX2-3	ENST00000352940.4|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000358007.3|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 	ENST00000544400.1|DDX47|ENSG00000213782.3|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
hg19_v2_chr6_-_111927062_111927125	0.0813508	NKX2-3	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr11_+_118889142_118889232	0.0810712	NKX2-3	ENST00000533632.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr11_+_12399071_12399185	0.0810266	NKX2-3	ENST00000539723.1|PARVA|ENSG00000197702.7|parvin, alpha 	ENST00000550549.1|PARVA|ENSG00000197702.7|parvin, alpha
hg19_v2_chr20_-_31071309_31071385	0.0805919	NKX2-3	ENST00000326071.4|C20orf112|ENSG00000197183.8|chromosome 20 open reading frame 112
hg19_v2_chr4_-_104021009_104021042	0.0785011	NKX2-3	ENST00000509245.1|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2 	ENST00000296424.4|BDH2|ENSG00000164039.10|3-hydroxybutyrate dehydrogenase, type 2
hg19_v2_chr18_+_43684310_43684373	0.0784493	NKX2-3	ENST00000592471.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1 	ENST00000585518.1|HAUS1|ENSG00000152240.8|HAUS augmin-like complex, subunit 1
hg19_v2_chr3_-_49058479_49058491	0.0781748	NKX2-3	ENST00000440857.1|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3
hg19_v2_chr6_+_134273300_134273320	0.0779896	NKX2-3	ENST00000416965.1|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr2_-_231989808_231989832	0.0774051	NKX2-3	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr1_+_206317450_206317478	0.0773111	NKX2-3	ENST00000358184.2|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000361052.3|CTSE|ENSG00000196188.6|cathepsin E 	ENST00000360218.2|CTSE|ENSG00000196188.6|cathepsin E
hg19_v2_chr7_-_86849883_86849910	0.0768254	NKX2-3	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr9_-_39239171_39239171	0.0761108	NKX2-3	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr5_-_39270725_39270771	0.0752449	NKX2-3	ENST00000512138.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000512982.1|FYB|ENSG00000082074.11|FYN binding protein 	ENST00000540520.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr5_-_83680192_83680209	0.0749739	NKX2-3	ENST00000380138.3|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr12_-_15815626_15815681	0.074699	NKX2-3	ENST00000540613.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr2_+_102803433_102803511	0.0742158	NKX2-3	ENST00000264257.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2 	ENST00000441515.2|IL1RL2|ENSG00000115598.5|interleukin 1 receptor-like 2
hg19_v2_chr9_-_99382065_99382151	0.0732939	NKX2-3	ENST00000265659.2|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375241.1|CDC14B|ENSG00000081377.12|cell division cycle 14B 	ENST00000375236.1|CDC14B|ENSG00000081377.12|cell division cycle 14B
hg19_v2_chr9_-_117267717_117267738	0.0730013	NKX2-3	ENST00000374057.3|DFNB31|ENSG00000095397.9|deafness, autosomal recessive 31
hg19_v2_chr11_+_7595136_7595171	0.0727264	NKX2-3	ENST00000529575.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr1_+_202431859_202431871	0.0727062	NKX2-3	ENST00000391959.3|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000367270.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr16_-_66952742_66952774	0.0721083	NKX2-3	ENST00000565235.2|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000568632.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin 	ENST00000565796.1|CDH16|ENSG00000166589.8|cadherin 16, KSP-cadherin
hg19_v2_chr18_+_61445007_61445021	0.0700242	NKX2-3	ENST00000447428.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7 	ENST00000546027.1|SERPINB7|ENSG00000166396.8|serpin peptidase inhibitor, clade B (ovalbumin), member 7
hg19_v2_chr2_-_54197915_54197977	0.0697971	NKX2-3	ENST00000404125.1|PSME4|ENSG00000068878.10|proteasome (prosome, macropain) activator subunit 4
hg19_v2_chr5_-_115177247_115177279	0.0697762	NKX2-3	ENST00000500945.2|ATG12|ENSG00000145782.8|autophagy related 12
hg19_v2_chr14_-_90798418_90798481	0.0687628	NKX2-3	ENST00000354366.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr8_-_101719159_101719226	0.0687003	NKX2-3	ENST00000520868.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522658.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr2_+_234621551_234621638	0.0684409	NKX2-3	ENST00000608381.1|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8 	ENST00000373414.3|UGT1A5|ENSG00000240224.1|UDP glucuronosyltransferase 1 family, polypeptide A5
hg19_v2_chr11_-_64856847_64856847	0.0682745	NKX2-3	ENST00000524603.1|AP003068.6|ENSG00000187066.4|transmembrane protein 262
hg19_v2_chr16_+_31225337_31225344	0.0682496	NKX2-3	ENST00000322122.3|TRIM72|ENSG00000177238.9|tripartite motif containing 72
hg19_v2_chr9_+_36036430_36036430	0.0681037	NKX2-3	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr17_-_15469590_15469590	0.0679146	NKX2-3	ENST00000312127.2|CDRT1|ENSG00000181464.2|CMT duplicated region transcript 1; Uncharacterized protein
hg19_v2_chrX_+_114795489_114795582	0.0677225	NKX2-3	ENST00000355899.3|PLS3|ENSG00000102024.13|plastin 3 	ENST00000537301.1|PLS3|ENSG00000102024.13|plastin 3 	ENST00000289290.3|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr11_+_11863500_11863576	0.0677094	NKX2-3	ENST00000527733.1|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47 	ENST00000539466.1|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47
hg19_v2_chr5_+_179105615_179105666	0.0676728	NKX2-3	ENST00000514383.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr20_+_56964253_56964369	0.0663512	NKX2-3	ENST00000395802.3|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr10_+_17794251_17794260	0.0661554	NKX2-3	ENST00000377495.1|TMEM236|ENSG00000148483.7|transmembrane protein 236 	ENST00000338221.5|TMEM236|ENSG00000148483.7|transmembrane protein 236
hg19_v2_chr3_-_69062790_69062855	0.0658242	NKX2-3	ENST00000540955.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase 	ENST00000456376.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr9_-_25678856_25678856	0.0644707	NKX2-3	ENST00000358022.3|TUSC1|ENSG00000198680.3|tumor suppressor candidate 1
hg19_v2_chr18_+_72166564_72166656	0.0639249	NKX2-3	ENST00000583216.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000581912.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family) 	ENST00000582589.1|CNDP2|ENSG00000133313.10|CNDP dipeptidase 2 (metallopeptidase M20 family)
hg19_v2_chr1_-_165668100_165668100	0.0636911	NKX2-3	ENST00000354775.4|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr17_+_41132564_41132600	0.0633726	NKX2-3	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr1_-_68962805_68962904	0.0628482	NKX2-3	ENST00000370966.5|DEPDC1|ENSG00000024526.12|DEP domain containing 1
hg19_v2_chr12_-_122712038_122712081	0.060991	NKX2-3	ENST00000413918.1|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein 	ENST00000443649.3|DIABLO|ENSG00000184047.11|diablo, IAP-binding mitochondrial protein
hg19_v2_chr2_+_172309634_172309643	0.0605733	NKX2-3	ENST00000339506.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr3_+_186560476_186560505	0.0603464	NKX2-3	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr8_-_49834299_49834446	0.0595711	NKX2-3	ENST00000396822.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr3_+_38179969_38180192	0.0591518	NKX2-3	ENST00000396334.3|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000417037.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000424893.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000495303.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000443433.2|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88 	ENST00000421516.1|MYD88|ENSG00000172936.8|myeloid differentiation primary response 88
hg19_v2_chr1_-_22109484_22109528	0.0588289	NKX2-3	ENST00000529637.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr14_-_95624227_95624347	0.0587128	NKX2-3	ENST00000526495.1|DICER1|ENSG00000100697.10|dicer 1, ribonuclease type III
hg19_v2_chr16_+_69458537_69458686	0.0583053	NKX2-3	ENST00000515314.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000561792.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000568237.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v2_chr2_-_180129484_180129574	0.0581172	NKX2-3	ENST00000428443.3|SESTD1|ENSG00000187231.9|SEC14 and spectrin domains 1
hg19_v2_chr16_-_3450963_3451065	0.0580998	NKX2-3	ENST00000573327.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000571906.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000573830.1|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000439568.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000422427.2|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000304926.3|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32 	ENST00000396852.4|ZSCAN32|ENSG00000140987.15|zinc finger and SCAN domain containing 32
hg19_v2_chrX_-_69509738_69509829	0.0579299	NKX2-3	ENST00000374454.1|PDZD11|ENSG00000120509.6|PDZ domain containing 11 	ENST00000239666.4|PDZD11|ENSG00000120509.6|PDZ domain containing 11
hg19_v2_chr2_-_38303218_38303323	0.0578893	NKX2-3	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr9_-_86593238_86593367	0.0578347	NKX2-3	ENST00000351839.3|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr11_+_57435441_57435628	0.0578003	NKX2-3	ENST00000528177.1|ZDHHC5|ENSG00000156599.6|zinc finger, DHHC-type containing 5
hg19_v2_chr4_-_156297919_156297937	0.0559652	NKX2-3	ENST00000450097.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr4_-_90757364_90757396	0.0557572	NKX2-3	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr1_+_202317815_202317854	0.0555862	NKX2-3	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr5_+_149569520_149569689	0.0550561	NKX2-3	ENST00000230671.2|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7 	ENST00000524041.1|SLC6A7|ENSG00000011083.4|solute carrier family 6 (neurotransmitter transporter), member 7
hg19_v2_chr16_-_58663720_58663790	0.0546147	NKX2-3	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr8_-_135652051_135652123	0.0542968	NKX2-3	ENST00000522257.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr21_-_46131470_46131495	0.0541168	NKX2-3	ENST00000323084.4|TSPEAR|ENSG00000175894.10|thrombospondin-type laminin G domain and EAR repeats
hg19_v2_chr1_+_15943995_15944014	0.0533832	NKX2-3	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr3_+_98482159_98482172	0.0529336	NKX2-3	ENST00000468553.1|ST3GAL6|ENSG00000064225.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
hg19_v2_chr5_-_83680603_83680617	0.0529255	NKX2-3	ENST00000296591.5|EDIL3|ENSG00000164176.8|EGF-like repeats and discoidin I-like domains 3
hg19_v2_chr3_-_69062742_69062757	0.0524235	NKX2-3	ENST00000424374.1|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr11_-_71753188_71753200	0.0523959	NKX2-3	ENST00000543009.1|NUMA1|ENSG00000137497.13|nuclear mitotic apparatus protein 1
hg19_v2_chr1_+_145883868_145883868	0.0514627	NKX2-3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr11_+_118889456_118889507	0.051409	NKX2-3	ENST00000528230.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000525303.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000434101.2|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000359005.4|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4 	ENST00000533058.1|TRAPPC4|ENSG00000196655.5|trafficking protein particle complex 4
hg19_v2_chr20_-_33735070_33735175	0.0509832	NKX2-3	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr19_+_13051206_13051244	0.0501918	NKX2-3	ENST00000586760.1|CALR|ENSG00000179218.9|calreticulin
hg19_v2_chr2_+_64069016_64069039	0.0499907	NKX2-3	ENST00000488245.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr11_-_118889323_118889408	0.0498279	NKX2-3	ENST00000527673.1|RPS25|ENSG00000118181.6|ribosomal protein S25
hg19_v2_chr7_-_127255724_127255780	0.0498226	NKX2-3	ENST00000463946.1|PAX4|ENSG00000106331.10|paired box 4 	ENST00000341640.2|PAX4|ENSG00000106331.10|paired box 4
hg19_v2_chr3_+_183967409_183967497	0.0494938	NKX2-3	ENST00000324557.4|ECE2|ENSG00000145194.13|endothelin converting enzyme 2 	ENST00000402825.3|ECE2|ENSG00000145194.13|endothelin converting enzyme 2
hg19_v2_chr5_+_147774275_147774340	0.0494707	NKX2-3	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr2_-_95787738_95787763	0.0491029	NKX2-3	ENST00000272418.2|MRPS5|ENSG00000144029.7|mitochondrial ribosomal protein S5
hg19_v2_chr10_-_104913367_104913393	0.0490025	NKX2-3	ENST00000423468.2|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr3_+_183892635_183892737	0.0487536	NKX2-3	ENST00000427072.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000411763.2|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000292807.5|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000448139.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit 	ENST00000455925.1|AP2M1|ENSG00000161203.9|adaptor-related protein complex 2, mu 1 subunit
hg19_v2_chr6_-_32731299_32731316	0.0477895	NKX2-3	ENST00000435145.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2 	ENST00000437316.2|HLA-DQB2|ENSG00000232629.4|major histocompatibility complex, class II, DQ beta 2
hg19_v2_chr11_-_10822029_10822128	0.0476498	NKX2-3	ENST00000528839.1|EIF4G2|ENSG00000110321.11|eukaryotic translation initiation factor 4 gamma, 2
hg19_v2_chr13_+_23993097_23993110	0.0470573	NKX2-3	ENST00000443092.1|SACS-AS1|ENSG00000229558.1|SACS antisense RNA 1
hg19_v2_chr14_+_89060749_89060783	0.046623	NKX2-3	ENST00000555900.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000406216.3|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000557737.1|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr1_-_2343951_2344018	0.0462878	NKX2-3	ENST00000288774.3|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000507596.1|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10 	ENST00000447513.2|PEX10|ENSG00000157911.5|peroxisomal biogenesis factor 10
hg19_v2_chr10_+_116697946_116698013	0.0460404	NKX2-3	ENST00000298746.3|TRUB1|ENSG00000165832.4|TruB pseudouridine (psi) synthase family member 1
hg19_v2_chr21_+_33671160_33671172	0.0459639	NKX2-3	ENST00000303645.5|MRAP|ENSG00000170262.8|melanocortin 2 receptor accessory protein
hg19_v2_chr2_+_161993465_161993481	0.0453637	NKX2-3	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr8_+_75262612_75262622	0.0452216	NKX2-3	ENST00000220822.7|GDAP1|ENSG00000104381.8|ganglioside induced differentiation associated protein 1
hg19_v2_chr15_-_78369994_78370069	0.044066	NKX2-3	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chr1_-_200379104_200379128	0.0439712	NKX2-3	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr3_-_100551141_100551158	0.0433186	NKX2-3	ENST00000478235.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000471901.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr20_+_60962143_60962172	0.0421596	NKX2-3	ENST00000343986.4|RPS21|ENSG00000171858.13|ribosomal protein S21
hg19_v2_chrX_-_14891150_14891201	0.041759	NKX2-3	ENST00000452869.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000398334.1|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B 	ENST00000324138.3|FANCB|ENSG00000181544.9|Fanconi anemia, complementation group B
hg19_v2_chr14_+_45366518_45366552	0.040954	NKX2-3	ENST00000557112.1|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr14_-_24017647_24017663	0.0407671	NKX2-3	ENST00000555334.1|ZFHX2|ENSG00000136367.12|zinc finger homeobox 2
hg19_v2_chr14_-_75643296_75643341	0.0405953	NKX2-3	ENST00000303575.4|TMED10|ENSG00000170348.4|transmembrane emp24-like trafficking protein 10 (yeast)
hg19_v2_chr5_-_148033726_148033741	0.0397927	NKX2-3	ENST00000354217.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000314512.6|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled 	ENST00000362016.2|HTR4|ENSG00000164270.13|5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled
hg19_v2_chr13_-_44735393_44735393	0.0393988	NKX2-3	ENST00000400419.1|SMIM2|ENSG00000139656.5|small integral membrane protein 2
hg19_v2_chr14_+_102276209_102276242	0.0393553	NKX2-3	ENST00000445439.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000334743.5|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557095.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr3_-_36986534_36986619	0.0392771	NKX2-3	ENST00000429976.2|TRANK1|ENSG00000168016.9|tetratricopeptide repeat and ankyrin repeat containing 1 	ENST00000301807.6|TRANK1|ENSG00000168016.9|tetratricopeptide repeat and ankyrin repeat containing 1
hg19_v2_chr10_-_32345305_32345376	0.0389643	NKX2-3	ENST00000302418.4|KIF5B|ENSG00000170759.10|kinesin family member 5B
hg19_v2_chr6_+_32121789_32121872	0.0386514	NKX2-3	ENST00000437001.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000375137.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr3_+_186560462_186560473	0.038587	NKX2-3	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr14_-_21516590_21516692	0.0380421	NKX2-3	ENST00000555026.1|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr14_-_60636561_60636597	0.0378995	NKX2-3	ENST00000536410.2|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000216500.5|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr2_+_90458201_90458201	0.0377596	NKX2-3	ENST00000603238.1|CH17-132F21.1|ENSG00000270999.1|Uncharacterized protein
hg19_v2_chr1_+_41157671_41157695	0.0376538	NKX2-3	ENST00000534399.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma 	ENST00000372653.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr1_+_207070775_207070797	0.0375715	NKX2-3	ENST00000391929.3|IL24|ENSG00000162892.11|interleukin 24 	ENST00000294984.2|IL24|ENSG00000162892.11|interleukin 24 	ENST00000367093.3|IL24|ENSG00000162892.11|interleukin 24
hg19_v2_chr10_+_79793518_79793641	0.0374464	NKX2-3	ENST00000440692.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000435275.1|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000372360.3|RPS24|ENSG00000138326.14|ribosomal protein S24 	ENST00000360830.4|RPS24|ENSG00000138326.14|ribosomal protein S24
hg19_v2_chr1_+_222817629_222817714	0.0368047	NKX2-3	ENST00000340535.7|MIA3|ENSG00000154305.12|melanoma inhibitory activity family, member 3
hg19_v2_chr19_+_45409011_45409069	0.0367037	NKX2-3	ENST00000252486.4|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000446996.1|APOE|ENSG00000130203.5|apolipoprotein E 	ENST00000434152.1|APOE|ENSG00000130203.5|apolipoprotein E
hg19_v2_chr8_+_41386761_41386787	0.0366941	NKX2-3	ENST00000523277.2|GINS4|ENSG00000147536.7|GINS complex subunit 4 (Sld5 homolog)
hg19_v2_chr12_-_125398654_125398687	0.0363601	NKX2-3	ENST00000541645.1|UBC|ENSG00000150991.10|ubiquitin C 	ENST00000540351.1|UBC|ENSG00000150991.10|ubiquitin C
hg19_v2_chr11_+_11863579_11863618	0.0358507	NKX2-3	ENST00000399455.2|USP47|ENSG00000170242.13|ubiquitin specific peptidase 47
hg19_v2_chr1_-_79472365_79472443	0.0357292	NKX2-3	ENST00000370742.3|ELTD1|ENSG00000162618.8|EGF, latrophilin and seven transmembrane domain containing 1
hg19_v2_chr14_-_30766223_30766249	0.035593	NKX2-3	ENST00000549360.1|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1	ENST00000508469.2|CTD-2251F13.1|ENSG00000248975.2|CTD-2251F13.1
hg19_v2_chr4_-_141677267_141677291	0.0354517	NKX2-3	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr2_+_173420697_173420873	0.0347657	NKX2-3	ENST00000282077.3|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000392571.2|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1 	ENST00000410055.1|PDK1|ENSG00000152256.9|pyruvate dehydrogenase kinase, isozyme 1
hg19_v2_chr16_-_69166031_69166070	0.0341817	NKX2-3	ENST00000398235.2|CHTF8|ENSG00000168802.8|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) 	ENST00000520529.1|CHTF8|ENSG00000168802.8|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
hg19_v2_chr5_-_77072085_77072139	0.0339177	NKX2-3	ENST00000518338.2|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520039.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000306388.6|TBCA|ENSG00000171530.9|tubulin folding cofactor A 	ENST00000520361.1|TBCA|ENSG00000171530.9|tubulin folding cofactor A
hg19_v2_chr21_+_30672433_30672464	0.0337187	NKX2-3	ENST00000451655.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr19_+_3178736_3178779	0.0336575	NKX2-3	ENST00000246115.3|S1PR4|ENSG00000125910.4|sphingosine-1-phosphate receptor 4
hg19_v2_chr13_+_50570019_50570028	0.0325825	NKX2-3	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr9_+_127020202_127020292	0.032373	NKX2-3	ENST00000373600.3|NEK6|ENSG00000119408.12|NIMA-related kinase 6 	ENST00000320246.5|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr1_-_22109682_22109719	0.0322117	NKX2-3	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr2_+_161993412_161993453	0.0320397	NKX2-3	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr11_-_62342375_62342471	0.0320237	NKX2-3	ENST00000378019.3|EEF1G|ENSG00000254772.5|eukaryotic translation elongation factor 1 gamma
hg19_v2_chr8_-_49833978_49833996	0.0318424	NKX2-3	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr1_+_46806837_46806885	0.0317842	NKX2-3	ENST00000537428.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr1_+_26147319_26147338	0.0317495	NKX2-3	ENST00000374300.3|MTFR1L|ENSG00000117640.13|mitochondrial fission regulator 1-like
hg19_v2_chr19_+_33865218_33865254	0.0301937	NKX2-3	ENST00000585933.2|CEBPG|ENSG00000153879.4|CCAAT/enhancer binding protein (C/EBP), gamma
hg19_v2_chr1_+_230883128_230883162	0.0299805	NKX2-3	ENST00000271971.2|CAPN9|ENSG00000135773.8|calpain 9 	ENST00000354537.1|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr2_+_234590556_234590584	0.0299315	NKX2-3	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr5_+_162930114_162930125	0.0297184	NKX2-3	ENST00000280969.5|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr12_+_49761224_49761259	0.0292832	NKX2-3	ENST00000553127.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000321898.6|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr19_-_56709162_56709289	0.0282021	NKX2-3	ENST00000589938.1|ZSCAN5B|ENSG00000197213.5|zinc finger and SCAN domain containing 5B 	ENST00000587032.2|ZSCAN5B|ENSG00000197213.5|zinc finger and SCAN domain containing 5B 	ENST00000586855.2|ZSCAN5B|ENSG00000197213.5|zinc finger and SCAN domain containing 5B
hg19_v2_chr3_+_39093481_39093520	0.0279056	NKX2-3	ENST00000302313.5|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000544962.1|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000396258.3|WDR48|ENSG00000114742.9|WD repeat domain 48 	ENST00000418020.1|WDR48|ENSG00000114742.9|WD repeat domain 48
hg19_v2_chr17_+_38444115_38444194	0.0274024	NKX2-3	ENST00000580824.1|CDC6|ENSG00000094804.5|cell division cycle 6 	ENST00000577249.1|CDC6|ENSG00000094804.5|cell division cycle 6
hg19_v2_chr10_+_16478942_16478983	0.0273837	NKX2-3	ENST00000535784.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000423462.2|PTER|ENSG00000165983.10|phosphotriesterase related 	ENST00000378000.1|PTER|ENSG00000165983.10|phosphotriesterase related
hg19_v2_chr19_+_14492217_14492241	0.0267087	NKX2-3	ENST00000587606.1|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000586517.1|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000591080.1|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr16_-_89008211_89008252	0.0266512	NKX2-3	ENST00000569464.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3 	ENST00000569443.1|CBFA2T3|ENSG00000129993.10|core-binding factor, runt domain, alpha subunit 2; translocated to, 3
hg19_v2_chr19_+_14491948_14492014	0.0263774	NKX2-3	ENST00000358600.3|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr12_+_56546363_56546397	0.0261613	NKX2-3	ENST00000551834.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000552568.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr1_-_28559502_28559570	0.0255724	NKX2-3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr19_+_14492247_14492264	0.0252752	NKX2-3	ENST00000357355.3|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000592261.2|CD97|ENSG00000123146.15|CD97 molecule 	ENST00000242786.5|CD97|ENSG00000123146.15|CD97 molecule
hg19_v2_chr8_+_28196157_28196204	0.0251868	NKX2-3	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr1_-_85870177_85870208	0.0251429	NKX2-3	ENST00000542148.1|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr5_-_152069089_152069147	0.0249814	NKX2-3	ENST00000506723.2|AC091969.1|ENSG00000249484.4|AC091969.1
hg19_v2_chrX_+_78003204_78003248	0.0247859	NKX2-3	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr6_+_32121218_32121354	0.0246824	NKX2-3	ENST00000414204.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000361568.2|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2 	ENST00000395523.1|PPT2|ENSG00000221988.8|palmitoyl-protein thioesterase 2
hg19_v2_chr3_-_3221358_3221394	0.0244296	NKX2-3	ENST00000424814.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000450014.1|CRBN|ENSG00000113851.9|cereblon 	ENST00000231948.4|CRBN|ENSG00000113851.9|cereblon 	ENST00000432408.2|CRBN|ENSG00000113851.9|cereblon
hg19_v2_chr12_+_49761273_49761330	0.0244138	NKX2-3	ENST00000551540.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552918.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000548777.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000547865.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2 	ENST00000552171.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr5_+_156693091_156693150	0.024241	NKX2-3	ENST00000318218.6|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000442283.2|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000522463.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2 	ENST00000521420.1|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr1_-_35325318_35325397	0.023719	NKX2-3	ENST00000423898.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12 	ENST00000456842.1|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr12_-_48398104_48398269	0.0235181	NKX2-3	ENST00000337299.6|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1 	ENST00000380518.3|COL2A1|ENSG00000139219.13|collagen, type II, alpha 1
hg19_v2_chr1_-_152086556_152086556	0.0232516	NKX2-3	ENST00000368804.1|TCHH|ENSG00000159450.8|trichohyalin
hg19_v2_chr22_-_44258280_44258336	0.0232394	NKX2-3	ENST00000540422.1|SULT4A1|ENSG00000130540.9|sulfotransferase family 4A, member 1
hg19_v2_chr18_-_43684230_43684300	0.0229832	NKX2-3	ENST00000592989.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 	ENST00000589869.1|ATP5A1|ENSG00000152234.11|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle
hg19_v2_chr8_+_70476088_70476102	0.0227425	NKX2-3	ENST00000525999.1|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr3_-_125802765_125802990	0.0226952	NKX2-3	ENST00000514891.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000512470.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000504035.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000360370.4|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000513723.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000510651.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3 	ENST00000514333.1|SLC41A3|ENSG00000114544.11|solute carrier family 41, member 3
hg19_v2_chr2_+_232135245_232135393	0.0225999	NKX2-3	ENST00000446447.1|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr18_+_22040593_22040616	0.0225625	NKX2-3	ENST00000256906.4|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr11_+_35211511_35211557	0.0224784	NKX2-3	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr5_+_108083517_108083576	0.022211	NKX2-3	ENST00000281092.4|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase 	ENST00000536402.1|FER|ENSG00000151422.8|fer (fps/fes related) tyrosine kinase
hg19_v2_chr20_-_30539773_30539895	0.0220963	NKX2-3	ENST00000202017.4|PDRG1|ENSG00000088356.4|p53 and DNA-damage regulated 1
hg19_v2_chr6_-_46048116_46048132	0.0211272	NKX2-3	ENST00000185206.6|CLIC5|ENSG00000112782.11|chloride intracellular channel 5
hg19_v2_chr1_+_110091189_110091268	0.0210064	NKX2-3	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr5_+_49961727_49961740	0.0204581	NKX2-3	ENST00000505697.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000503750.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8 	ENST00000514342.2|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr17_-_29641084_29641103	0.0202828	NKX2-3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr2_+_191045173_191045266	0.0201456	NKX2-3	ENST00000409870.1|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr17_-_76870126_76870201	0.0201018	NKX2-3	ENST00000586057.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr1_+_225140372_225140418	0.019691	NKX2-3	ENST00000366848.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000439375.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr11_-_27384737_27384801	0.0195013	NKX2-3	ENST00000317945.6|CCDC34|ENSG00000109881.12|coiled-coil domain containing 34
hg19_v2_chr2_+_201170596_201170619	0.0193033	NKX2-3	ENST00000439084.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like 	ENST00000409718.1|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr7_+_34697973_34698021	0.0184232	NKX2-3	ENST00000381539.3|NPSR1|ENSG00000187258.9|neuropeptide S receptor 1
hg19_v2_chr6_+_144185573_144185587	0.0184022	NKX2-3	ENST00000237275.6|ZC2HC1B|ENSG00000118491.7|zinc finger, C2HC-type containing 1B 	ENST00000539295.1|ZC2HC1B|ENSG00000118491.7|zinc finger, C2HC-type containing 1B
hg19_v2_chr1_+_230883179_230883196	0.0175024	NKX2-3	ENST00000366666.2|CAPN9|ENSG00000135773.8|calpain 9
hg19_v2_chr15_-_99791413_99791437	0.0172903	NKX2-3	ENST00000394129.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558663.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394135.3|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000561365.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560279.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chrX_-_55057403_55057497	0.0170746	NKX2-3	ENST00000396198.3|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000335854.4|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000455688.1|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000330807.5|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2
hg19_v2_chr1_-_31538517_31538632	0.0169935	NKX2-3	ENST00000440538.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000423018.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000424085.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000426105.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000257075.5|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373747.3|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000525843.1|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1 	ENST00000373742.2|PUM1|ENSG00000134644.11|pumilio RNA-binding family member 1
hg19_v2_chr4_-_16077741_16077760	0.0167517	NKX2-3	ENST00000447510.2|PROM1|ENSG00000007062.7|prominin 1 	ENST00000540805.1|PROM1|ENSG00000007062.7|prominin 1 	ENST00000539194.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr8_+_92261516_92261555	0.0160278	NKX2-3	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr17_-_58096336_58096413	0.0156005	NKX2-3	ENST00000587125.1|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene 	ENST00000407042.3|TBC1D3P1-DHX40P1|ENSG00000267104.1|TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
hg19_v2_chr12_-_110434096_110434139	0.0153174	NKX2-3	ENST00000320063.9|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000457474.2|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000547815.1|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2 	ENST00000361006.5|GIT2|ENSG00000139436.16|G protein-coupled receptor kinase interacting ArfGAP 2
hg19_v2_chr22_+_21213771_21213788	0.0146374	NKX2-3	ENST00000439214.1|SNAP29|ENSG00000099940.7|synaptosomal-associated protein, 29kDa
hg19_v2_chr6_+_33239787_33239859	0.0145867	NKX2-3	ENST00000439602.2|RPS18|ENSG00000231500.2|ribosomal protein S18 	ENST00000474973.1|RPS18|ENSG00000231500.2|ribosomal protein S18
hg19_v2_chr17_-_6524159_6524233	0.0143062	NKX2-3	ENST00000589033.1|KIAA0753|ENSG00000198920.5|KIAA0753
hg19_v2_chrX_-_40036520_40036582	0.0142284	NKX2-3	ENST00000406200.2|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000378455.4|BCOR|ENSG00000183337.12|BCL6 corepressor 	ENST00000342274.4|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr6_+_46761118_46761132	0.0141107	NKX2-3	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr13_-_30881134_30881181	0.0140084	NKX2-3	ENST00000380617.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1 	ENST00000441394.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr17_-_36760865_36760976	0.0136912	NKX2-3	ENST00000584266.1|SRCIN1|ENSG00000017373.11|SRC kinase signaling inhibitor 1
hg19_v2_chr14_-_23762777_23762821	0.013547	NKX2-3	ENST00000431326.2|HOMEZ|ENSG00000215271.6|homeobox and leucine zipper encoding
hg19_v2_chr6_+_131958436_131958525	0.0132146	NKX2-3	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr1_-_19746236_19746261	0.0131827	NKX2-3	ENST00000375144.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr7_+_29186192_29186222	0.0124427	NKX2-3	ENST00000539406.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr14_+_39703084_39703110	0.0122844	NKX2-3	ENST00000553728.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr10_+_103348031_103348092	0.0120006	NKX2-3	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr1_-_35325400_35325431	0.0116281	NKX2-3	ENST00000521580.2|SMIM12|ENSG00000163866.8|small integral membrane protein 12
hg19_v2_chr19_+_50084561_50084603	0.0115537	NKX2-3	ENST00000246794.5|PRRG2|ENSG00000126460.6|proline rich Gla (G-carboxyglutamic acid) 2
hg19_v2_chr9_+_71819927_71820053	0.0113514	NKX2-3	ENST00000535702.1|TJP2|ENSG00000119139.12|tight junction protein 2
hg19_v2_chr11_+_120195992_120196023	0.0113027	NKX2-3	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr17_+_66521936_66522026	0.0112927	NKX2-3	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr10_+_129785536_129785551	0.0111887	NKX2-3	ENST00000419012.2|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr15_+_67841330_67841348	0.0111601	NKX2-3	ENST00000354498.5|MAP2K5|ENSG00000137764.15|mitogen-activated protein kinase kinase 5
hg19_v2_chr3_-_171527560_171527714	0.010853	NKX2-3	ENST00000331659.2|PP13439|ENSG00000183657.2|PP13439
hg19_v2_chr6_-_33239712_33239723	0.0108227	NKX2-3	ENST00000436044.2|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae)
hg19_v2_chr15_-_101142401_101142445	0.010727	NKX2-3	ENST00000314742.8|LINS|ENSG00000140471.12|lines homolog (Drosophila)
hg19_v2_chr1_+_230193521_230193545	0.0105309	NKX2-3	ENST00000543760.1|GALNT2|ENSG00000143641.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
hg19_v2_chr19_+_56751773_56751773	0.0103975	NKX2-3	ENST00000600684.1|ZSCAN5D|ENSG00000267908.1|zinc finger and SCAN domain containing 5D
hg19_v2_chr17_-_26662440_26662463	0.0103016	NKX2-3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr1_-_29508321_29508444	0.0100486	NKX2-3	ENST00000546138.1|SRSF4|ENSG00000116350.11|serine/arginine-rich splicing factor 4
hg19_v2_chr6_-_26216872_26216895	0.00938366	NKX2-3	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chr3_+_10157276_10157377	0.00907142	NKX2-3	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr12_-_48119301_48119329	0.008885	NKX2-3	ENST00000545824.2|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific 	ENST00000422538.3|ENDOU|ENSG00000111405.4|endonuclease, polyU-specific
hg19_v2_chr19_-_50979981_50980050	0.00882061	NKX2-3	ENST00000595790.1|FAM71E1|ENSG00000142530.6|family with sequence similarity 71, member E1 	ENST00000600100.1|FAM71E1|ENSG00000142530.6|family with sequence similarity 71, member E1
hg19_v2_chr4_+_102734967_102735022	0.00868751	NKX2-3	ENST00000444316.2|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr12_+_49761147_49761167	0.00842506	NKX2-3	ENST00000549298.1|SPATS2|ENSG00000123352.13|spermatogenesis associated, serine-rich 2
hg19_v2_chr2_-_24270217_24270232	0.00829461	NKX2-3	ENST00000295148.4|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44 	ENST00000406895.3|C2orf44|ENSG00000163026.7|chromosome 2 open reading frame 44
hg19_v2_chr12_-_108714412_108714446	0.00781711	NKX2-3	ENST00000412676.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1 	ENST00000550573.1|CMKLR1|ENSG00000174600.9|chemokine-like receptor 1
hg19_v2_chr4_-_48082192_48082207	0.00780338	NKX2-3	ENST00000507351.1|TXK|ENSG00000074966.6|TXK tyrosine kinase
hg19_v2_chr18_-_67624160_67624238	0.00777698	NKX2-3	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr12_+_56546223_56546361	0.00767864	NKX2-3	ENST00000550443.1|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle 	ENST00000207437.5|MYL6B|ENSG00000196465.6|myosin, light chain 6B, alkali, smooth muscle and non-muscle
hg19_v2_chr11_+_63998006_63998044	0.00762194	NKX2-3	ENST00000355040.4|DNAJC4|ENSG00000110011.9|DnaJ (Hsp40) homolog, subfamily C, member 4
hg19_v2_chr17_+_48823896_48823936	0.00761877	NKX2-3	ENST00000511974.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr10_+_18041218_18041227	0.00717317	NKX2-3	ENST00000480516.1|TMEM236|ENSG00000184040.7|TMEM236	ENST00000457860.1|TMEM236|ENSG00000184040.7|TMEM236
hg19_v2_chr22_+_44427230_44427253	0.0067248	NKX2-3	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr7_+_7196565_7196714	0.00609785	NKX2-3	ENST00000429911.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr17_+_75401152_75401172	0.00596935	NKX2-3	ENST00000585930.1|SEPT9|ENSG00000184640.13|septin 9
hg19_v2_chr4_+_144303093_144303132	0.00562534	NKX2-3	ENST00000505913.1|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr1_-_216896780_216896800	0.00557551	NKX2-3	ENST00000459955.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000366937.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000408911.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000391890.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr5_-_38557561_38557574	0.0052509	NKX2-3	ENST00000511561.1|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr6_-_33239612_33239684	0.00523467	NKX2-3	ENST00000482399.1|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae) 	ENST00000445902.2|VPS52|ENSG00000223501.4|vacuolar protein sorting 52 homolog (S. cerevisiae)
hg19_v2_chr15_-_50558223_50558263	0.00506963	NKX2-3	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr9_+_116263778_116263793	0.0050519	NKX2-3	ENST00000394646.3|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr16_-_18468926_18468926	0.00486824	NKX2-3	ENST00000545114.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr17_-_61905005_61905041	0.00458221	NKX2-3	ENST00000584574.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000585145.1|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli) 	ENST00000427159.2|FTSJ3|ENSG00000108592.12|FtsJ homolog 3 (E. coli)
hg19_v2_chr3_-_122712079_122712120	0.00437622	NKX2-3	ENST00000393583.2|SEMA5B|ENSG00000082684.10|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
hg19_v2_chr22_+_45714301_45714339	0.00282195	NKX2-3	ENST00000427777.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr17_-_26662464_26662519	0.00261832	NKX2-3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr12_+_104982622_104982628	0.00190383	NKX2-3	ENST00000549016.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr1_+_46806452_46806496	0.00186588	NKX2-3	ENST00000536062.1|NSUN4|ENSG00000117481.6|NOP2/Sun domain family, member 4
hg19_v2_chr8_-_74791051_74791145	0.00129435	NKX2-3	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr7_-_2883928_2883993	0.00110697	NKX2-3	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr11_-_14521379_14521573	0.00052203	NKX2-3	ENST00000249923.3|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000529866.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000439561.2|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000534771.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr7_+_134430212_134430237	0.000467328	NKX2-3	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr1_+_35220613_35220718	0.000393763	NKX2-3	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr14_-_94547541_94547591	0.00026273	NKX2-3	ENST00000544005.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000555054.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000330836.5|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24
hg19_v2_chr12_+_93963590_93963628	1.76182e-05	NKX2-3	ENST00000340600.2|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
