hg19_v2_chr12_+_16500571_16500598	0.208536	NKX1-1	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr12_+_16500599_16500731	0.208292	NKX1-1	ENST00000535309.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540056.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396209.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000540126.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr4_-_89442940_89442940	0.200779	NKX1-1	ENST00000527353.1|PIGY|ENSG00000255072.1|phosphatidylinositol glycan anchor biosynthesis, class Y
hg19_v2_chr10_+_120789223_120789231	0.19364	NKX1-1	ENST00000425699.1|NANOS1|ENSG00000188613.5|nanos homolog 1 (Drosophila)
hg19_v2_chr12_+_16500037_16500076	0.192242	NKX1-1	ENST00000536371.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000010404.2|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr4_-_87515202_87515284	0.187686	NKX1-1	ENST00000502302.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000513186.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr2_+_8822113_8822196	0.171932	NKX1-1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr7_+_12726623_12726750	0.155369	NKX1-1	ENST00000439721.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr17_+_57233087_57233146	0.140116	NKX1-1	ENST00000578777.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577457.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000582995.1|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr1_-_108507631_108507809	0.126081	NKX1-1	ENST00000527011.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000370056.4|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr12_+_64798826_64798936	0.11555	NKX1-1	ENST00000540203.1|XPOT|ENSG00000184575.7|exportin, tRNA
hg19_v2_chr15_+_96904487_96904487	0.114417	NKX1-1	ENST00000600790.1|AC087477.1|ENSG00000268484.1|Uncharacterized protein
hg19_v2_chr13_-_36050819_36050834	0.105728	NKX1-1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chrX_-_47509994_47510008	0.0993305	NKX1-1	ENST00000343894.4|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chr14_+_32798547_32798606	0.091382	NKX1-1	ENST00000557354.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557102.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6 	ENST00000557272.1|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr1_+_174843548_174843609	0.0881794	NKX1-1	ENST00000478442.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000465412.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr1_-_221915418_221915518	0.0865504	NKX1-1	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr17_-_57232525_57232584	0.0864101	NKX1-1	ENST00000583380.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000580541.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000578105.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000437036.2|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr2_-_97405775_97405816	0.0852381	NKX1-1	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr1_-_197115818_197115829	0.0793487	NKX1-1	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr11_-_105892937_105893130	0.0749758	NKX1-1	ENST00000301919.4|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000534458.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530108.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils 	ENST00000530788.1|MSANTD4|ENSG00000170903.6|Myb/SANT-like DNA-binding domain containing 4 with coiled-coils
hg19_v2_chr7_+_26331678_26331690	0.0732968	NKX1-1	ENST00000446848.2|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr1_+_62439037_62439047	0.0732602	NKX1-1	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr12_+_102513950_102513996	0.068453	NKX1-1	ENST00000378128.3|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000327680.2|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000541394.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000543784.1|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr16_-_66864806_66864900	0.0682561	NKX1-1	ENST00000566336.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000394074.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000563185.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000359087.4|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000379463.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000565535.1|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1 	ENST00000290810.3|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr7_+_12727250_12727265	0.0677201	NKX1-1	ENST00000404894.1|ARL4A|ENSG00000122644.8|ADP-ribosylation factor-like 4A
hg19_v2_chr5_-_159546396_159546470	0.0670978	NKX1-1	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr1_-_151762943_151763012	0.0663983	NKX1-1	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr8_+_26371763_26371791	0.0662512	NKX1-1	ENST00000521913.1|DPYSL2|ENSG00000092964.12|dihydropyrimidinase-like 2
hg19_v2_chr11_-_62521614_62521660	0.0643184	NKX1-1	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr7_-_86849883_86849910	0.0642894	NKX1-1	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr12_+_102514019_102514035	0.0633643	NKX1-1	ENST00000537257.1|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000358383.5|PARPBP|ENSG00000185480.7|PARP1 binding protein 	ENST00000392911.2|PARPBP|ENSG00000185480.7|PARP1 binding protein
hg19_v2_chr11_-_4629388_4629489	0.0633024	NKX1-1	ENST00000526337.1|TRIM68|ENSG00000167333.8|tripartite motif containing 68 	ENST00000300747.5|TRIM68|ENSG00000167333.8|tripartite motif containing 68
hg19_v2_chr1_+_100818009_100818072	0.0630109	NKX1-1	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr18_-_33709268_33709380	0.062286	NKX1-1	ENST00000269187.5|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000590986.1|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6 	ENST00000440549.2|SLC39A6|ENSG00000141424.8|solute carrier family 39 (zinc transporter), member 6
hg19_v2_chr6_-_80247105_80247133	0.0611581	NKX1-1	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr11_-_111741994_111742058	0.057622	NKX1-1	ENST00000398006.2|ALG9|ENSG00000086848.10|ALG9, alpha-1,2-mannosyltransferase
hg19_v2_chr3_+_158519654_158519944	0.0572117	NKX1-1	ENST00000415822.2|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000392813.4|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000264266.8|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1
hg19_v2_chr17_-_57232596_57232630	0.055467	NKX1-1	ENST00000581068.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2 	ENST00000330137.7|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr8_+_98656693_98656774	0.0542014	NKX1-1	ENST00000519934.1|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr19_+_36249057_36249102	0.0537131	NKX1-1	ENST00000301165.5|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000536950.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000537459.1|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55 	ENST00000421853.2|C19orf55|ENSG00000167595.10|chromosome 19 open reading frame 55
hg19_v2_chr11_-_118023594_118023635	0.0526126	NKX1-1	ENST00000529878.1|SCN4B|ENSG00000177098.4|sodium channel, voltage-gated, type IV, beta subunit
hg19_v2_chr10_+_5238793_5238807	0.0499025	NKX1-1	ENST00000263126.1|AKR1C4|ENSG00000198610.6|aldo-keto reductase family 1, member C4
hg19_v2_chr12_+_7014126_7014192	0.0490281	NKX1-1	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr11_-_124981475_124981659	0.0478496	NKX1-1	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr16_-_2318111_2318147	0.043049	NKX1-1	ENST00000301730.8|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain 	ENST00000564822.1|RNPS1|ENSG00000205937.7|RNA binding protein S1, serine-rich domain
hg19_v2_chr15_-_78526942_78527049	0.042762	NKX1-1	ENST00000258873.4|ACSBG1|ENSG00000103740.5|acyl-CoA synthetase bubblegum family member 1
hg19_v2_chr3_-_105588231_105588396	0.0427138	NKX1-1	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr2_+_187371440_187371567	0.0423737	NKX1-1	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr17_-_44657017_44657088	0.0409561	NKX1-1	ENST00000573185.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000570550.1|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000445552.2|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000336125.5|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000329240.4|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A 	ENST00000337845.7|ARL17A|ENSG00000185829.11|ADP-ribosylation factor-like 17A
hg19_v2_chr3_+_57261743_57261824	0.0409194	NKX1-1	ENST00000288266.3|APPL1|ENSG00000157500.6|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
hg19_v2_chr6_-_82957433_82957477	0.0405841	NKX1-1	ENST00000306270.7|IBTK|ENSG00000005700.10|inhibitor of Bruton agammaglobulinemia tyrosine kinase
hg19_v2_chr17_-_44439084_44439130	0.0400815	NKX1-1	ENST00000575960.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000575698.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000571246.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000434041.2|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000570618.1|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B 	ENST00000450673.3|ARL17B|ENSG00000228696.4|ADP-ribosylation factor-like 17B
hg19_v2_chrX_+_72783026_72783049	0.0389343	NKX1-1	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr4_-_54232144_54232267	0.0386324	NKX1-1	ENST00000388940.4|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000503450.1|SCFD2|ENSG00000184178.11|sec1 family domain containing 2 	ENST00000401642.3|SCFD2|ENSG00000184178.11|sec1 family domain containing 2
hg19_v2_chr3_-_59035673_59035810	0.0379455	NKX1-1	ENST00000491845.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000472469.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000471288.1|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67 	ENST00000295966.7|C3orf67|ENSG00000163689.14|chromosome 3 open reading frame 67
hg19_v2_chr3_-_105587879_105587892	0.0376219	NKX1-1	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr6_-_85473073_85473114	0.0374199	NKX1-1	ENST00000606621.1|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr19_-_14228541_14228582	0.0359036	NKX1-1	ENST00000590853.1|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha 	ENST00000308677.4|PRKACA|ENSG00000072062.9|protein kinase, cAMP-dependent, catalytic, alpha
hg19_v2_chr2_-_239197238_239197256	0.0347922	NKX1-1	ENST00000254657.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr12_+_7014064_7014075	0.0346791	NKX1-1	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr13_+_36050881_36050887	0.0323262	NKX1-1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr1_+_100818156_100818210	0.0319932	NKX1-1	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr7_+_99647411_99647433	0.0299808	NKX1-1	ENST00000438937.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chr8_+_98656336_98656535	0.0295868	NKX1-1	ENST00000336273.3|MTDH|ENSG00000147649.5|metadherin
hg19_v2_chr4_+_87515454_87515486	0.029114	NKX1-1	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr4_-_103682145_103682157	0.0274722	NKX1-1	ENST00000226578.4|MANBA|ENSG00000109323.4|mannosidase, beta A, lysosomal
hg19_v2_chr5_+_150226085_150226085	0.0270764	NKX1-1	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr17_+_57232690_57232860	0.0268645	NKX1-1	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr8_+_22132810_22132844	0.0261853	NKX1-1	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr7_-_6048702_6048756	0.0248206	NKX1-1	ENST00000265849.7|PMS2|ENSG00000122512.10|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)
hg19_v2_chr7_+_26331541_26331647	0.0243635	NKX1-1	ENST00000416246.1|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000338523.4|SNX10|ENSG00000086300.11|sorting nexin 10 	ENST00000412416.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr7_+_2559399_2559496	0.0237955	NKX1-1	ENST00000222725.5|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 	ENST00000359574.3|LFNG|ENSG00000106003.8|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg19_v2_chr2_-_47142884_47143007	0.0235433	NKX1-1	ENST00000409105.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409973.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409913.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000319466.4|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr1_+_46972668_46972669	0.0226698	NKX1-1	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr7_-_73256838_73256870	0.0213633	NKX1-1	ENST00000297873.4|WBSCR27|ENSG00000165171.6|Williams Beuren syndrome chromosome region 27
hg19_v2_chr17_-_45266542_45266683	0.021123	NKX1-1	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr2_-_239197201_239197212	0.0208608	NKX1-1	ENST00000254658.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr2_-_167232484_167232503	0.019404	NKX1-1	ENST00000375387.4|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000303354.6|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit 	ENST00000409672.1|SCN9A|ENSG00000169432.10|sodium channel, voltage-gated, type IX, alpha subunit
hg19_v2_chr10_+_99205959_99205981	0.0179509	NKX1-1	ENST00000352634.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000353979.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370842.2|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000345745.5|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr1_-_51796226_51796260	0.0170697	NKX1-1	ENST00000451380.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A 	ENST00000371747.3|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A 	ENST00000439482.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr18_+_63273310_63273326	0.0161633	NKX1-1	ENST00000579862.1|RP11-775G23.1|ENSG00000265217.1|RP11-775G23.1
hg19_v2_chr1_-_151762900_151762910	0.0147613	NKX1-1	ENST00000440583.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr17_+_59489112_59489112	0.0140548	NKX1-1	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr1_-_231004220_231004399	0.0130211	NKX1-1	ENST00000366663.5|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr19_+_32896697_32896786	0.0121893	NKX1-1	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr11_-_65625678_65625804	0.0121406	NKX1-1	ENST00000308162.5|CFL1|ENSG00000172757.8|cofilin 1 (non-muscle)
hg19_v2_chr7_-_143991230_143991230	0.0118849	NKX1-1	ENST00000543357.1|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chrX_-_47509887_47509990	0.0114381	NKX1-1	ENST00000247161.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000592066.1|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family 	ENST00000376983.3|ELK1|ENSG00000126767.13|ELK1, member of ETS oncogene family
hg19_v2_chr12_-_50790267_50790405	0.010869	NKX1-1	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr1_-_28969517_28969605	0.0107109	NKX1-1	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr19_+_32897009_32897095	0.00988213	NKX1-1	ENST00000342179.5|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans) 	ENST00000586427.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr8_+_94929168_94929235	0.00908937	NKX1-1	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr19_+_42811093_42811109	0.00895993	NKX1-1	ENST00000595750.1|PRR19|ENSG00000188368.5|proline rich 19
hg19_v2_chr1_-_51796987_51797018	0.00892436	NKX1-1	ENST00000262676.5|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr9_+_124329336_124329406	0.0087676	NKX1-1	ENST00000394340.3|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000436835.1|DAB2IP|ENSG00000136848.12|DAB2 interacting protein 	ENST00000259371.2|DAB2IP|ENSG00000136848.12|DAB2 interacting protein
hg19_v2_chr14_+_32798462_32798539	0.00806394	NKX1-1	ENST00000280979.4|AKAP6|ENSG00000151320.6|A kinase (PRKA) anchor protein 6
hg19_v2_chr19_-_8070474_8070564	0.00802057	NKX1-1	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr11_-_59383617_59383617	0.00793308	NKX1-1	ENST00000263847.1|OSBP|ENSG00000110048.7|oxysterol binding protein
hg19_v2_chr9_+_116225999_116226029	0.00784759	NKX1-1	ENST00000317613.6|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr4_+_128554081_128554121	0.00750206	NKX1-1	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr4_-_66536196_66536216	0.00572185	NKX1-1	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr12_-_102513843_102513908	0.00544715	NKX1-1	ENST00000551744.2|NUP37|ENSG00000075188.4|nucleoporin 37kDa 	ENST00000552283.1|NUP37|ENSG00000075188.4|nucleoporin 37kDa
hg19_v2_chr7_+_99647389_99647410	0.00444446	NKX1-1	ENST00000543588.1|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000292450.4|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21 	ENST00000456748.2|ZSCAN21|ENSG00000166529.10|zinc finger and SCAN domain containing 21
hg19_v2_chr8_+_22132847_22132876	0.00373627	NKX1-1	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr11_-_71823715_71823792	0.00335812	NKX1-1	ENST00000545944.1|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15 	ENST00000502597.2|ANAPC15|ENSG00000110200.4|anaphase promoting complex subunit 15
hg19_v2_chr3_+_186560476_186560505	0.00269144	NKX1-1	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr10_+_99205894_99205954	0.00244778	NKX1-1	ENST00000370854.3|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000393760.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000414567.1|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16 	ENST00000370846.4|ZDHHC16|ENSG00000171307.14|zinc finger, DHHC-type containing 16
hg19_v2_chr7_-_143892748_143892748	0.00222686	NKX1-1	ENST00000378115.2|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr12_+_28410128_28410133	0.00196334	NKX1-1	ENST00000381259.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91 	ENST00000381256.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr3_+_186288454_186288535	0.00159406	NKX1-1	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr3_+_186560462_186560473	0.00140632	NKX1-1	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr8_+_94929110_94929167	0.00120123	NKX1-1	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr15_+_64386261_64386322	0.00011148	NKX1-1	ENST00000560829.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr10_+_1095416_1095482	2.65011e-05	NKX1-1	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
