hg19_v2_chr12_-_78934441_78934474	0.590223	LHX3	ENST00000546865.1|RP11-171L9.1|ENSG00000257165.1|RP11-171L9.1	ENST00000547089.1|RP11-171L9.1|ENSG00000257165.1|RP11-171L9.1
hg19_v2_chrX_+_107288280_107288317	0.461861	LHX3	ENST00000458383.1|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr11_-_63376013_63376053	0.418932	LHX3	ENST00000540943.1|PLA2G16|ENSG00000176485.6|phospholipase A2, group XVI
hg19_v2_chr6_-_47445214_47445308	0.355099	LHX3	ENST00000604014.1|RP11-385F7.1|ENSG00000270761.1|RP11-385F7.1
hg19_v2_chr2_+_29001711_29001866	0.279997	LHX3	ENST00000418910.1|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr10_+_18549645_18549698	0.276227	LHX3	ENST00000396576.2|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr9_-_128246769_128246780	0.260703	LHX3	ENST00000444226.1|MAPKAP1|ENSG00000119487.12|mitogen-activated protein kinase associated protein 1
hg19_v2_chr15_-_75748143_75748183	0.25594	LHX3	ENST00000568431.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568309.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000568190.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000570115.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A 	ENST00000564778.1|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr4_-_120243545_120243562	0.242554	LHX3	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr17_-_8263538_8263538	0.228901	LHX3	ENST00000535173.1|AC135178.1|ENSG00000198150.2|HCG1985372; Uncharacterized protein; cDNA FLJ37541 fis, clone BRCAN2026340
hg19_v2_chr12_-_42631529_42631602	0.207267	LHX3	ENST00000548917.1|YAF2|ENSG00000015153.10|YY1 associated factor 2
hg19_v2_chr8_-_57123815_57123867	0.206062	LHX3	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr2_+_234826016_234826050	0.197508	LHX3	ENST00000324695.4|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8 	ENST00000433712.2|TRPM8|ENSG00000144481.12|transient receptor potential cation channel, subfamily M, member 8
hg19_v2_chr16_+_28565230_28565257	0.191141	LHX3	ENST00000317058.3|CCDC101|ENSG00000176476.4|coiled-coil domain containing 101
hg19_v2_chr14_+_29241910_29242013	0.181726	LHX3	ENST00000399387.4|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23 	ENST00000552957.1|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23 	ENST00000548213.1|C14orf23|ENSG00000186960.6|chromosome 14 open reading frame 23
hg19_v2_chr19_-_6279932_6280000	0.168649	LHX3	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr11_-_327537_327537	0.168364	LHX3	ENST00000602735.1|IFITM3|ENSG00000142089.11|interferon induced transmembrane protein 3
hg19_v2_chr11_-_16419067_16419108	0.165843	LHX3	ENST00000533411.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr16_-_28937027_28937073	0.162041	LHX3	ENST00000358201.4|RABEP2|ENSG00000177548.8|rabaptin, RAB GTPase binding effector protein 2
hg19_v2_chr19_+_50016411_50016531	0.155431	LHX3	ENST00000426395.3|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha 	ENST00000600273.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha 	ENST00000599988.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr5_+_81601166_81601166	0.152537	LHX3	ENST00000439350.1|ATP6AP1L|ENSG00000205464.7|ATPase, H+ transporting, lysosomal accessory protein 1-like
hg19_v2_chr14_-_45252031_45252036	0.150728	LHX3	ENST00000556405.1|RP11-398E10.1|ENSG00000258998.1|RP11-398E10.1
hg19_v2_chr4_+_74301880_74301964	0.14918	LHX3	ENST00000395792.2|AFP|ENSG00000081051.3|alpha-fetoprotein 	ENST00000226359.2|AFP|ENSG00000081051.3|alpha-fetoprotein
hg19_v2_chr4_+_71384257_71384295	0.14563	LHX3	ENST00000339336.4|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr16_+_89334512_89334512	0.14468	LHX3	ENST00000602042.1|AC137932.1|ENSG00000268218.1|AC137932.1
hg19_v2_chr19_+_50016610_50016658	0.144039	LHX3	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr11_-_559377_559393	0.14055	LHX3	ENST00000486629.1|C11orf35|ENSG00000185522.4|chromosome 11 open reading frame 35
hg19_v2_chr19_+_11457175_11457224	0.140303	LHX3	ENST00000458408.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000586451.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159 	ENST00000588592.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr8_-_66750978_66750987	0.140104	LHX3	ENST00000523253.1|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr14_-_36990354_36990397	0.134103	LHX3	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr3_-_47517302_47517451	0.133232	LHX3	ENST00000441517.2|SCAP|ENSG00000114650.14|SREBF chaperone 	ENST00000545718.1|SCAP|ENSG00000114650.14|SREBF chaperone
hg19_v2_chr8_+_91233750_91233766	0.128039	LHX3	ENST00000523406.1|LINC00534|ENSG00000253394.1|long intergenic non-protein coding RNA 534
hg19_v2_chr19_-_11457162_11457194	0.124505	LHX3	ENST00000590482.1|TMEM205|ENSG00000105518.9|transmembrane protein 205
hg19_v2_chrX_-_39186610_39186621	0.123329	LHX3	ENST00000429281.1|RP11-265P11.2|ENSG00000235304.1|RP11-265P11.2	ENST00000448597.1|RP11-265P11.2|ENSG00000235304.1|RP11-265P11.2
hg19_v2_chrM_+_10053_10073	0.120188	LHX3	ENST00000361227.2|MT-ND3|ENSG00000198840.2|mitochondrially encoded NADH dehydrogenase 3
hg19_v2_chr19_-_43969796_43969813	0.115079	LHX3	ENST00000244333.3|LYPD3|ENSG00000124466.8|LY6/PLAUR domain containing 3
hg19_v2_chr2_-_228582709_228582754	0.112359	LHX3	ENST00000541617.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409456.2|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000409287.1|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3 	ENST00000258403.3|SLC19A3|ENSG00000135917.9|solute carrier family 19 (thiamine transporter), member 3
hg19_v2_chr1_-_24126051_24126062	0.10522	LHX3	ENST00000445705.1|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase
hg19_v2_chr18_+_61616510_61616549	0.1049	LHX3	ENST00000408945.3|HMSD|ENSG00000221887.4|histocompatibility (minor) serpin domain containing
hg19_v2_chr17_-_39093672_39093738	0.100509	LHX3	ENST00000209718.3|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible) 	ENST00000436344.3|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible) 	ENST00000485751.1|KRT23|ENSG00000108244.12|keratin 23 (histone deacetylase inducible)
hg19_v2_chr14_-_101295407_101295537	0.0993714	LHX3	ENST00000596284.1|AL117190.2|ENSG00000267918.1|AL117190.2
hg19_v2_chr12_+_59989918_59989965	0.0966765	LHX3	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr19_+_48949030_48949086	0.0952995	LHX3	ENST00000253237.5|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chr5_-_1882858_1883003	0.0937472	LHX3	ENST00000511126.1|IRX4|ENSG00000113430.5|iroquois homeobox 4 	ENST00000231357.2|IRX4|ENSG00000113430.5|iroquois homeobox 4
hg19_v2_chr2_-_99871570_99871745	0.0885891	LHX3	ENST00000333017.2|LYG2|ENSG00000185674.5|lysozyme G-like 2 	ENST00000409679.1|LYG2|ENSG00000185674.5|lysozyme G-like 2 	ENST00000423306.1|LYG2|ENSG00000185674.5|lysozyme G-like 2
hg19_v2_chr12_-_10282836_10282863	0.0861871	LHX3	ENST00000304084.8|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000353231.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000525605.1|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr2_-_207078154_207078169	0.085281	LHX3	ENST00000447845.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr10_-_115904361_115904375	0.08273	LHX3	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr1_-_160924589_160924607	0.0817957	LHX3	ENST00000368029.3|ITLN2|ENSG00000158764.6|intelectin 2
hg19_v2_chr17_-_72772425_72772445	0.0817037	LHX3	ENST00000578822.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr5_-_88120083_88120096	0.0815847	LHX3	ENST00000509373.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr14_-_21566731_21566836	0.0814588	LHX3	ENST00000360947.3|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr12_-_10282742_10282817	0.0797835	LHX3	ENST00000298523.5|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000396484.2|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A 	ENST00000310002.4|CLEC7A|ENSG00000172243.13|C-type lectin domain family 7, member A
hg19_v2_chr13_-_81801115_81801122	0.0797059	LHX3	ENST00000567258.1|LINC00564|ENSG00000260094.1|long intergenic non-protein coding RNA 564
hg19_v2_chr19_+_11457232_11457257	0.0796897	LHX3	ENST00000587531.1|CCDC159|ENSG00000183401.7|coiled-coil domain containing 159
hg19_v2_chr2_-_14541060_14541087	0.0781314	LHX3	ENST00000418420.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276 	ENST00000417751.1|LINC00276|ENSG00000230448.1|long intergenic non-protein coding RNA 276
hg19_v2_chr5_+_140529630_140529683	0.0771961	LHX3	ENST00000543635.1|PCDHB6|ENSG00000113211.3|protocadherin beta 6
hg19_v2_chr2_-_166930131_166930149	0.0767242	LHX3	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr13_+_24144796_24144809	0.0748331	LHX3	ENST00000403372.2|TNFRSF19|ENSG00000127863.11|tumor necrosis factor receptor superfamily, member 19
hg19_v2_chr7_+_107224364_107224391	0.0722362	LHX3	ENST00000491150.1|BCAP29|ENSG00000075790.6|B-cell receptor-associated protein 29
hg19_v2_chr2_-_99279928_99279942	0.0708433	LHX3	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr17_-_71223839_71223887	0.0699217	LHX3	ENST00000579872.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000580032.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr9_-_100000957_100001043	0.0679749	LHX3	ENST00000366109.2|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5	ENST00000607322.1|RP11-498P14.5|ENSG00000203279.3|RP11-498P14.5
hg19_v2_chr16_+_15489603_15489627	0.0674599	LHX3	ENST00000568766.1|RP11-1021N1.1|ENSG00000261130.1|Uncharacterized protein  	ENST00000287594.7|MPV17L|ENSG00000156968.8|MPV17 mitochondrial membrane protein-like
hg19_v2_chr17_-_72772462_72772511	0.0656795	LHX3	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr9_+_125132803_125132835	0.0646971	LHX3	ENST00000540753.1|PTGS1|ENSG00000095303.10|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
hg19_v2_chr3_-_20053741_20053822	0.0616177	LHX3	ENST00000389050.4|PP2D1|ENSG00000183977.9|protein phosphatase 2C-like domain containing 1
hg19_v2_chr4_+_3344141_3344178	0.061004	LHX3	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr3_+_101443476_101443515	0.0605394	LHX3	ENST00000327230.4|CEP97|ENSG00000182504.6|centrosomal protein 97kDa 	ENST00000494050.1|CEP97|ENSG00000182504.6|centrosomal protein 97kDa
hg19_v2_chr6_-_49712147_49712158	0.060387	LHX3	ENST00000433368.2|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3 	ENST00000354620.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr6_+_26104104_26104169	0.0596726	LHX3	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr7_-_115799942_115799955	0.0594823	LHX3	ENST00000484212.1|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr5_+_147691979_147691997	0.0585017	LHX3	ENST00000274565.4|SPINK7|ENSG00000145879.6|serine peptidase inhibitor, Kazal type 7 (putative)
hg19_v2_chr4_-_36245561_36245601	0.0573365	LHX3	ENST00000506189.1|ARAP2|ENSG00000047365.7|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
hg19_v2_chr8_+_119294456_119294486	0.0571977	LHX3	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr1_+_244214577_244214593	0.0550635	LHX3	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr18_+_6774000_6774019	0.0549596	LHX3	ENST00000532723.1|ARHGAP28|ENSG00000088756.8|Rho GTPase activating protein 28
hg19_v2_chr5_-_59783882_59783910	0.0547278	LHX3	ENST00000505507.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific 	ENST00000502484.2|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr4_-_103940791_103940896	0.0546114	LHX3	ENST00000510559.1|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENST00000394789.3|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENST00000296422.7|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
hg19_v2_chr14_-_21567009_21567173	0.053479	LHX3	ENST00000556174.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000554478.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000553980.1|ZNF219|ENSG00000165804.11|zinc finger protein 219 	ENST00000421093.2|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr17_-_28661065_28661080	0.050359	LHX3	ENST00000328886.4|TMIGD1|ENSG00000182271.8|transmembrane and immunoglobulin domain containing 1 	ENST00000538566.2|TMIGD1|ENSG00000182271.8|transmembrane and immunoglobulin domain containing 1
hg19_v2_chr9_-_21482312_21482312	0.0501717	LHX3	ENST00000448696.3|IFNE|ENSG00000184995.6|interferon, epsilon
hg19_v2_chr6_-_159466136_159466184	0.0493969	LHX3	ENST00000367066.3|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein 	ENST00000326965.6|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr4_+_71384300_71384314	0.0493608	LHX3	ENST00000504451.1|AMTN|ENSG00000187689.5|amelotin
hg19_v2_chr12_+_4385230_4385295	0.0487355	LHX3	ENST00000536537.1|CCND2|ENSG00000118971.3|cyclin D2
hg19_v2_chr6_+_83072923_83072978	0.0468877	LHX3	ENST00000535040.1|TPBG|ENSG00000146242.5|trophoblast glycoprotein
hg19_v2_chr7_+_97361388_97361405	0.0453821	LHX3	ENST00000350485.4|TAC1|ENSG00000006128.7|tachykinin, precursor 1 	ENST00000346867.4|TAC1|ENSG00000006128.7|tachykinin, precursor 1
hg19_v2_chr6_-_49712123_49712134	0.0448147	LHX3	ENST00000263045.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr6_-_49712091_49712107	0.0446101	LHX3	ENST00000371159.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr3_+_2933893_2933921	0.0430349	LHX3	ENST00000397459.2|CNTN4|ENSG00000144619.10|contactin 4
hg19_v2_chr15_+_75970672_75970672	0.0426121	LHX3	ENST00000435356.1|AC105020.1|ENSG00000203392.2|Uncharacterized protein; cDNA FLJ12988 fis, clone NT2RP3000080
hg19_v2_chr5_-_88120151_88120177	0.0424938	LHX3	ENST00000506716.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr17_-_27418537_27418537	0.0423624	LHX3	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr19_+_49199209_49199284	0.0422324	LHX3	ENST00000522966.1|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000425340.2|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included) 	ENST00000391876.4|FUT2|ENSG00000176920.10|fucosyltransferase 2 (secretor status included)
hg19_v2_chr18_+_72201829_72201845	0.0400128	LHX3	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr7_-_105332084_105332111	0.0384548	LHX3	ENST00000472195.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_-_48866517_48866534	0.038406	LHX3	ENST00000371841.1|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr18_+_28956740_28956846	0.0376491	LHX3	ENST00000308128.4|DSG4|ENSG00000175065.7|desmoglein 4 	ENST00000359747.4|DSG4|ENSG00000175065.7|desmoglein 4
hg19_v2_chr3_-_141747950_141748004	0.0369421	LHX3	ENST00000497579.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr17_+_68071389_68071426	0.0355048	LHX3	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr19_+_48949087_48949116	0.0353798	LHX3	ENST00000598711.1|GRWD1|ENSG00000105447.8|glutamate-rich WD repeat containing 1
hg19_v2_chr3_+_167582561_167582646	0.0335639	LHX3	ENST00000463642.1|RP11-298O21.6|ENSG00000242924.1|RP11-298O21.6	ENST00000464514.1|RP11-298O21.7|ENSG00000244214.1|RP11-298O21.7
hg19_v2_chr6_-_49712072_49712088	0.0321372	LHX3	ENST00000423399.2|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr4_-_68829144_68829224	0.0317777	LHX3	ENST00000508048.1|TMPRSS11A|ENSG00000187054.10|transmembrane protease, serine 11A
hg19_v2_chr12_-_118628350_118628371	0.0308285	LHX3	ENST00000537952.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000537822.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr1_-_24126023_24126049	0.030764	LHX3	ENST00000429356.1|GALE|ENSG00000117308.10|UDP-galactose-4-epimerase
hg19_v2_chr9_-_116065551_116065551	0.0306276	LHX3	ENST00000297894.5|RNF183|ENSG00000165188.9|ring finger protein 183
hg19_v2_chr18_-_53303123_53303190	0.0304108	LHX3	ENST00000569357.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000565124.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000398339.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr4_-_68829226_68829237	0.0299253	LHX3	ENST00000396188.2|TMPRSS11A|ENSG00000187054.10|transmembrane protease, serine 11A
hg19_v2_chr2_-_188312971_188312987	0.0295417	LHX3	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr7_-_87342564_87342617	0.0291273	LHX3	ENST00000265724.3|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1 	ENST00000416177.1|ABCB1|ENSG00000085563.10|ATP-binding cassette, sub-family B (MDR/TAP), member 1
hg19_v2_chr10_+_104263743_104263836	0.0279686	LHX3	ENST00000369902.3|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000369899.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila) 	ENST00000423559.2|SUFU|ENSG00000107882.7|suppressor of fused homolog (Drosophila)
hg19_v2_chr15_+_65843130_65843157	0.0279674	LHX3	ENST00000569894.1|PTPLAD1|ENSG00000074696.8|protein tyrosine phosphatase-like A domain containing 1
hg19_v2_chr12_-_7656357_7656489	0.027665	LHX3	ENST00000396620.3|CD163|ENSG00000177575.8|CD163 molecule 	ENST00000432237.2|CD163|ENSG00000177575.8|CD163 molecule 	ENST00000359156.4|CD163|ENSG00000177575.8|CD163 molecule
hg19_v2_chr4_-_23891658_23891690	0.0273342	LHX3	ENST00000507380.1|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr1_+_197237352_197237543	0.0256917	LHX3	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chrX_-_110655306_110655330	0.0249259	LHX3	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr5_-_39274617_39274636	0.022063	LHX3	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chr6_+_72926145_72926245	0.0218448	LHX3	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr12_-_52761262_52761267	0.0187616	LHX3	ENST00000257901.3|KRT85|ENSG00000135443.4|keratin 85
hg19_v2_chrX_-_52827141_52827141	0.0187085	LHX3	ENST00000375511.3|SPANXN5|ENSG00000204363.4|SPANX family, member N5
hg19_v2_chr5_+_140557371_140557371	0.0186539	LHX3	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr1_-_231005310_231005347	0.0151186	LHX3	ENST00000470540.1|C1orf198|ENSG00000119280.12|chromosome 1 open reading frame 198
hg19_v2_chr10_-_74283694_74283749	0.0149283	LHX3	ENST00000398763.4|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1 	ENST00000418483.2|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1 	ENST00000489666.2|MICU1|ENSG00000107745.12|mitochondrial calcium uptake 1
hg19_v2_chr5_+_166711804_166711843	0.0148815	LHX3	ENST00000518659.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2 	ENST00000545108.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr18_+_616711_616720	0.0145642	LHX3	ENST00000579494.1|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr1_+_15668240_15668263	0.0145518	LHX3	ENST00000444385.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr17_+_68071458_68071481	0.0143979	LHX3	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr7_-_36764142_36764157	0.0140778	LHX3	ENST00000258749.5|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil) 	ENST00000535891.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr18_+_616672_616681	0.0138975	LHX3	ENST00000338387.7|CLUL1|ENSG00000079101.12|clusterin-like 1 (retinal)
hg19_v2_chr4_+_113568207_113568367	0.0138776	LHX3	ENST00000511529.1|LARP7|ENSG00000174720.11|La ribonucleoprotein domain family, member 7
hg19_v2_chr6_+_114178512_114178586	0.0125494	LHX3	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chrX_+_9431324_9431371	0.0122688	LHX3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr12_-_11287243_11287243	0.0118985	LHX3	ENST00000539585.1|TAS2R30|ENSG00000256188.1|taste receptor, type 2, member 30
hg19_v2_chr15_+_86686953_86686953	0.0109997	LHX3	ENST00000421325.2|AGBL1|ENSG00000166748.8|ATP/GTP binding protein-like 1
hg19_v2_chr14_+_62164340_62164443	0.0107435	LHX3	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr12_+_40787194_40787197	0.01051	LHX3	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr7_+_39017504_39017598	0.00921223	LHX3	ENST00000403058.1|POU6F2|ENSG00000106536.15|POU class 6 homeobox 2
hg19_v2_chr8_+_92261516_92261555	0.00899593	LHX3	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chrX_-_55057403_55057497	0.00814939	LHX3	ENST00000396198.3|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000335854.4|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000455688.1|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2 	ENST00000330807.5|ALAS2|ENSG00000158578.14|aminolevulinate, delta-, synthase 2
hg19_v2_chr9_-_215744_215893	0.00665445	LHX3	ENST00000382387.2|C9orf66|ENSG00000183784.5|chromosome 9 open reading frame 66
hg19_v2_chr17_-_60142609_60142657	0.00640521	LHX3	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr15_+_64680003_64680063	0.00604218	LHX3	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr5_+_179135246_179135327	0.00601548	LHX3	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr2_+_135596106_135596137	0.00542217	LHX3	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chrX_-_19504642_19504642	0.00440041	LHX3	ENST00000469203.2|MAP3K15|ENSG00000180815.10|mitogen-activated protein kinase kinase kinase 15
hg19_v2_chr12_+_8309630_8309742	0.00435605	LHX3	ENST00000396570.3|ZNF705A|ENSG00000196946.5|zinc finger protein 705A
hg19_v2_chr4_+_158493642_158493770	0.00381249	LHX3	ENST00000507108.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000455598.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1	ENST00000509450.1|RP11-364P22.1|ENSG00000234111.2|RP11-364P22.1
hg19_v2_chrM_-_14670_14676	0.00316505	LHX3	ENST00000361681.2|MT-ND6|ENSG00000198695.2|mitochondrially encoded NADH dehydrogenase 6
hg19_v2_chr3_+_121902511_121902539	0.00306621	LHX3	ENST00000490131.1|CASR|ENSG00000036828.9|calcium-sensing receptor
hg19_v2_chr1_-_150944411_150944443	0.00295438	LHX3	ENST00000368949.4|CERS2|ENSG00000143418.15|ceramide synthase 2
hg19_v2_chrM_+_14741_14767	0.00283159	LHX3	ENST00000361789.2|MT-CYB|ENSG00000198727.2|mitochondrially encoded cytochrome b
hg19_v2_chr8_+_11961898_11961898	0.00184215	LHX3	ENST00000400085.3|ZNF705D|ENSG00000215343.3|zinc finger protein 705D
hg19_v2_chr16_+_15489629_15489644	0.00179746	LHX3	ENST00000396385.3|MPV17L|ENSG00000156968.8|MPV17 mitochondrial membrane protein-like
hg19_v2_chr11_+_27015628_27015646	0.00147065	LHX3	ENST00000318627.2|FIBIN|ENSG00000176971.2|fin bud initiation factor homolog (zebrafish)
hg19_v2_chr4_-_23891693_23891706	0.000364959	LHX3	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
