hg19_v2_chr1_-_153044083_153044088	0.697835	ISX	ENST00000341611.2|SPRR2B|ENSG00000196805.6|small proline-rich protein 2B
hg19_v2_chr7_+_37723336_37723410	0.645605	ISX	ENST00000450180.1|GPR141|ENSG00000187037.4|G protein-coupled receptor 141
hg19_v2_chr16_-_55866997_55867098	0.592195	ISX	ENST00000360526.3|CES1|ENSG00000198848.8|carboxylesterase 1 	ENST00000361503.4|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr17_-_18266818_18266872	0.434875	ISX	ENST00000583780.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr8_-_82395461_82395498	0.416091	ISX	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr6_+_3259148_3259294	0.344075	ISX	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr22_+_46476192_46476222	0.320377	ISX	ENST00000443490.1|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr16_-_55867146_55867249	0.282513	ISX	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr11_+_77532233_77532244	0.253563	ISX	ENST00000525409.1|AAMDC|ENSG00000087884.10|adipogenesis associated, Mth938 domain containing
hg19_v2_chr18_-_67624412_67624431	0.223794	ISX	ENST00000580335.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr7_+_142985467_142985547	0.221693	ISX	ENST00000392925.2|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr4_-_171012844_171012850	0.217754	ISX	ENST00000502392.1|AADAT|ENSG00000109576.9|aminoadipate aminotransferase
hg19_v2_chr2_+_90248739_90248739	0.206009	ISX	ENST00000468879.1|IGKV1D-43|ENSG00000242580.1|immunoglobulin kappa variable 1D-43
hg19_v2_chr7_-_112635675_112635720	0.194114	ISX	ENST00000447785.1|AC018464.3|ENSG00000234520.1|AC018464.3	ENST00000451962.1|AC018464.3|ENSG00000234520.1|AC018464.3
hg19_v2_chr5_-_147286065_147286107	0.19118	ISX	ENST00000318315.4|C5orf46|ENSG00000178776.4|chromosome 5 open reading frame 46 	ENST00000515291.1|C5orf46|ENSG00000178776.4|chromosome 5 open reading frame 46
hg19_v2_chr15_-_75199213_75199237	0.182128	ISX	ENST00000562698.1|FAM219B|ENSG00000178761.10|family with sequence similarity 219, member B
hg19_v2_chr7_-_92107229_92107265	0.179291	ISX	ENST00000603053.1|ERVW-1|ENSG00000242950.2|endogenous retrovirus group W, member 1
hg19_v2_chr16_+_31724618_31724630	0.175337	ISX	ENST00000530881.1|ZNF720|ENSG00000197302.6|zinc finger protein 720 	ENST00000529515.1|ZNF720|ENSG00000197302.6|zinc finger protein 720
hg19_v2_chr20_-_35580104_35580133	0.174026	ISX	ENST00000373694.5|SAMHD1|ENSG00000101347.7|SAM domain and HD domain 1
hg19_v2_chr4_+_147145709_147145709	0.17101	ISX	ENST00000504313.1|RP11-6L6.2|ENSG00000250673.1|Uncharacterized protein
hg19_v2_chr1_+_155278625_155278745	0.166954	ISX	ENST00000368356.4|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase 	ENST00000356657.6|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr14_-_24711470_24711494	0.162451	ISX	ENST00000559969.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr14_-_24711806_24711861	0.162112	ISX	ENST00000540705.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000538777.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558566.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000559019.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr6_+_30687978_30688141	0.16095	ISX	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr4_-_19458597_19458623	0.16043	ISX	ENST00000505347.1|RP11-3J1.1|ENSG00000248238.1|RP11-3J1.1
hg19_v2_chr5_+_53686658_53686686	0.158156	ISX	ENST00000512618.1|LINC01033|ENSG00000249069.3|long intergenic non-protein coding RNA 1033
hg19_v2_chr14_-_24711865_24711880	0.152053	ISX	ENST00000399423.4|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000267415.7|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr1_+_32666188_32666274	0.14902	ISX	ENST00000421922.2|CCDC28B|ENSG00000160050.10|coiled-coil domain containing 28B
hg19_v2_chr9_+_34646651_34646689	0.148601	ISX	ENST00000378842.3|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase
hg19_v2_chr4_-_48018680_48018704	0.145033	ISX	ENST00000513178.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr17_+_46970127_46970132	0.139184	ISX	ENST00000355938.5|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr17_+_46970134_46970170	0.136998	ISX	ENST00000503641.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000514808.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr1_+_155278539_155278559	0.132708	ISX	ENST00000447866.1|FDPS|ENSG00000160752.10|farnesyl diphosphate synthase
hg19_v2_chr5_+_150226085_150226085	0.130255	ISX	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr10_-_104001231_104001274	0.129508	ISX	ENST00000370002.3|PITX3|ENSG00000107859.5|paired-like homeodomain 3
hg19_v2_chr14_-_24711764_24711792	0.1277	ISX	ENST00000557921.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2 	ENST00000558476.1|TINF2|ENSG00000092330.11|TERF1 (TRF1)-interacting nuclear factor 2
hg19_v2_chr5_-_177580855_177580927	0.126684	ISX	ENST00000514354.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein 	ENST00000511078.1|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr1_-_36916011_36916057	0.12614	ISX	ENST00000356637.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000354267.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000235532.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr6_-_31125850_31126015	0.125254	ISX	ENST00000507751.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448162.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000502557.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503420.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507892.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507226.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000513222.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000503934.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000396263.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000508683.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000428174.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000448141.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000507829.1|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000455279.2|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1 	ENST00000376266.5|CCHCR1|ENSG00000204536.9|coiled-coil alpha-helical rod protein 1
hg19_v2_chr19_-_52307357_52307368	0.12447	ISX	ENST00000594900.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr6_-_85474219_85474237	0.116503	ISX	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr6_+_160542870_160542968	0.115872	ISX	ENST00000324965.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1 	ENST00000457470.2|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr2_-_228244013_228244027	0.115096	ISX	ENST00000304568.3|TM4SF20|ENSG00000168955.3|transmembrane 4 L six family member 20
hg19_v2_chr5_+_177631497_177631508	0.113489	ISX	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr20_-_17662705_17662874	0.112681	ISX	ENST00000455029.2|RRBP1|ENSG00000125844.11|ribosome binding protein 1
hg19_v2_chr9_+_34646624_34646649	0.110674	ISX	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr1_+_28261533_28261564	0.110241	ISX	ENST00000411604.1|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B 	ENST00000373888.4|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v2_chr1_-_21620877_21620963	0.107728	ISX	ENST00000527991.1|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chrX_-_153363125_153363182	0.107143	ISX	ENST00000407218.1|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome) 	ENST00000453960.2|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr17_-_77005813_77005856	0.106987	ISX	ENST00000590370.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1 	ENST00000591625.1|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr6_-_39693111_39693217	0.105747	ISX	ENST00000373215.3|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000538893.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000287152.7|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000373216.3|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr14_-_88200641_88200643	0.104431	ISX	ENST00000556168.1|RP11-1152H15.1|ENSG00000258807.1|RP11-1152H15.1
hg19_v2_chr2_-_96700664_96700673	0.103792	ISX	ENST00000359548.4|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000377137.3|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000439254.1|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial 	ENST00000453542.1|GPAT2|ENSG00000186281.8|glycerol-3-phosphate acyltransferase 2, mitochondrial
hg19_v2_chr19_-_10227503_10227591	0.103437	ISX	ENST00000593054.1|EIF3G|ENSG00000130811.6|eukaryotic translation initiation factor 3, subunit G
hg19_v2_chr17_+_42785976_42786039	0.103353	ISX	ENST00000393547.2|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae) 	ENST00000398338.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr7_+_148982396_148982408	0.0993386	ISX	ENST00000418158.2|ZNF783|ENSG00000204946.5|zinc finger family member 783
hg19_v2_chr10_-_1095050_1095110	0.0984471	ISX	ENST00000381344.3|IDI1|ENSG00000067064.6|isopentenyl-diphosphate delta isomerase 1
hg19_v2_chr5_+_177631523_177631572	0.0981008	ISX	ENST00000506339.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000355836.5|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000514633.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000515193.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000506259.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B 	ENST00000504898.1|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr17_+_40440481_40440561	0.0979037	ISX	ENST00000590726.2|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000452307.2|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000444283.1|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A 	ENST00000588868.1|STAT5A|ENSG00000126561.12|signal transducer and activator of transcription 5A
hg19_v2_chr2_+_204571375_204571432	0.0977754	ISX	ENST00000374478.4|CD28|ENSG00000178562.13|CD28 molecule
hg19_v2_chr5_-_177580933_177580968	0.0972919	ISX	ENST00000274606.3|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr19_-_3557570_3557590	0.0966857	ISX	ENST00000355415.2|MFSD12|ENSG00000161091.8|major facilitator superfamily domain containing 12
hg19_v2_chr2_-_198540719_198540748	0.0960509	ISX	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr20_-_50419055_50419066	0.0958736	ISX	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr14_-_73925225_73925323	0.0952897	ISX	ENST00000356296.4|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000355058.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000359560.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000557597.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555238.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000535282.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555987.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554546.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr17_-_42277203_42277281	0.0951061	ISX	ENST00000587097.1|ATXN7L3|ENSG00000087152.11|ataxin 7-like 3
hg19_v2_chr10_-_99205607_99205779	0.0943263	ISX	ENST00000477692.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000485122.2|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370886.5|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370885.4|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370902.3|EXOSC1|ENSG00000171311.8|exosome component 1 	ENST00000370884.5|EXOSC1|ENSG00000171311.8|exosome component 1
hg19_v2_chr12_-_51422017_51422058	0.0924772	ISX	ENST00000394904.3|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr6_+_160542821_160542852	0.0886426	ISX	ENST00000366963.4|SLC22A1|ENSG00000175003.8|solute carrier family 22 (organic cation transporter), member 1
hg19_v2_chr3_+_111393501_111393538	0.0870204	ISX	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr17_-_12920994_12921005	0.0860514	ISX	ENST00000609101.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2
hg19_v2_chr12_+_3000073_3000092	0.0860355	ISX	ENST00000397132.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr6_+_34204642_34204664	0.0848212	ISX	ENST00000347617.6|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000401473.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000311487.5|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000447654.1|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1 	ENST00000395004.3|HMGA1|ENSG00000137309.15|high mobility group AT-hook 1
hg19_v2_chr4_-_89442940_89442940	0.0838683	ISX	ENST00000527353.1|PIGY|ENSG00000255072.1|phosphatidylinositol glycan anchor biosynthesis, class Y
hg19_v2_chr17_-_40337470_40337470	0.0805497	ISX	ENST00000293330.1|HCRT|ENSG00000161610.1|hypocretin (orexin) neuropeptide precursor
hg19_v2_chr11_+_63953587_63953685	0.0798437	ISX	ENST00000305218.4|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1 	ENST00000538945.1|STIP1|ENSG00000168439.12|stress-induced-phosphoprotein 1
hg19_v2_chr16_+_3070313_3070347	0.0788609	ISX	ENST00000326577.4|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr4_-_138453606_138453673	0.0782442	ISX	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr6_+_31126291_31126399	0.0777945	ISX	ENST00000376257.3|TCF19|ENSG00000137310.7|transcription factor 19 	ENST00000376255.4|TCF19|ENSG00000137310.7|transcription factor 19
hg19_v2_chr16_+_89160217_89160268	0.0769875	ISX	ENST00000317447.4|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000537290.1|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3
hg19_v2_chr9_-_4666421_4666492	0.0755577	ISX	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr1_+_28261492_28261516	0.0755266	ISX	ENST00000373894.3|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v2_chr11_-_26744908_26744936	0.0750203	ISX	ENST00000533617.1|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
hg19_v2_chr5_+_140557371_140557371	0.0746229	ISX	ENST00000239444.2|PCDHB8|ENSG00000120322.2|protocadherin beta 8
hg19_v2_chr7_-_2883928_2883993	0.0741526	ISX	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr12_+_7014126_7014192	0.0739024	ISX	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr6_+_53948328_53948338	0.0733667	ISX	ENST00000370876.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr5_-_177580777_177580830	0.0730176	ISX	ENST00000314397.4|NHP2|ENSG00000145912.4|NHP2 ribonucleoprotein
hg19_v2_chr1_-_43833628_43833703	0.0719668	ISX	ENST00000413844.2|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1 	ENST00000372458.3|ELOVL1|ENSG00000066322.8|ELOVL fatty acid elongase 1
hg19_v2_chr14_-_104181771_104181841	0.0707886	ISX	ENST00000554913.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000554974.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000553361.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000555055.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000555964.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000556682.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000445556.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000553332.1|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3 	ENST00000352127.7|XRCC3|ENSG00000126215.9|X-ray repair complementing defective repair in Chinese hamster cells 3
hg19_v2_chr2_-_227050079_227050093	0.0653438	ISX	ENST00000423838.1|AC068138.1|ENSG00000235070.3|AC068138.1
hg19_v2_chr14_-_81425828_81425857	0.0651461	ISX	ENST00000555529.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556042.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa 	ENST00000556981.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr17_+_59489112_59489112	0.0649988	ISX	ENST00000335108.2|C17orf82|ENSG00000187013.2|chromosome 17 open reading frame 82
hg19_v2_chr8_+_22132810_22132844	0.063651	ISX	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr4_-_141348763_141348776	0.0626914	ISX	ENST00000509477.1|CLGN|ENSG00000153132.8|calmegin
hg19_v2_chr5_-_137374288_137374311	0.0620774	ISX	ENST00000514310.1|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr17_+_46970178_46970180	0.0603864	ISX	ENST00000393366.2|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) 	ENST00000506855.1|ATP5G1|ENSG00000159199.9|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)
hg19_v2_chr12_+_7013897_7014045	0.0597615	ISX	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chrX_+_19362011_19362122	0.058532	ISX	ENST00000379806.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000545074.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000540249.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000423505.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000417819.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000422285.2|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000355808.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000379805.3|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr12_-_57039739_57039798	0.0567138	ISX	ENST00000552959.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000551020.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000553007.2|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552919.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000552104.1|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 	ENST00000262030.3|ATP5B|ENSG00000110955.4|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide
hg19_v2_chr16_-_31106048_31106124	0.0562567	ISX	ENST00000300851.6|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr17_+_73452695_73452744	0.056211	ISX	ENST00000582186.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000582455.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000581252.1|KIAA0195|ENSG00000177728.10|KIAA0195 	ENST00000579208.1|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr19_+_42811093_42811109	0.0560263	ISX	ENST00000595750.1|PRR19|ENSG00000188368.5|proline rich 19
hg19_v2_chr20_+_55967129_55967286	0.0554803	ISX	ENST00000371219.2|RBM38|ENSG00000132819.12|RNA binding motif protein 38
hg19_v2_chrX_-_24690771_24690794	0.0552233	ISX	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr6_-_33385655_33385719	0.0541266	ISX	ENST00000440279.3|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli) 	ENST00000607266.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr5_+_53751445_53751508	0.0537033	ISX	ENST00000302005.1|HSPB3|ENSG00000169271.1|heat shock 27kDa protein 3
hg19_v2_chr17_-_77005801_77005812	0.0527677	ISX	ENST00000392446.5|CANT1|ENSG00000171302.12|calcium activated nucleotidase 1
hg19_v2_chr12_-_10978957_10978957	0.0526195	ISX	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr6_-_33385902_33386094	0.0524973	ISX	ENST00000374500.5|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr16_+_3070356_3070383	0.0509606	ISX	ENST00000341627.5|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575124.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A 	ENST00000575836.1|TNFRSF12A|ENSG00000006327.9|tumor necrosis factor receptor superfamily, member 12A
hg19_v2_chr16_+_3333443_3333545	0.0500334	ISX	ENST00000572748.1|ZNF263|ENSG00000006194.6|zinc finger protein 263 	ENST00000573578.1|ZNF263|ENSG00000006194.6|zinc finger protein 263 	ENST00000574253.1|ZNF263|ENSG00000006194.6|zinc finger protein 263
hg19_v2_chr17_+_36508826_36508826	0.0482766	ISX	ENST00000580660.1|SOCS7|ENSG00000174111.8|suppressor of cytokine signaling 7
hg19_v2_chr17_-_79650689_79650810	0.0482703	ISX	ENST00000574938.1|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16 	ENST00000570561.1|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16 	ENST00000573392.1|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16 	ENST00000576135.1|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16
hg19_v2_chr3_+_186288454_186288535	0.0480179	ISX	ENST00000265028.3|DNAJB11|ENSG00000090520.6|DnaJ (Hsp40) homolog, subfamily B, member 11
hg19_v2_chr15_+_64680003_64680063	0.0478614	ISX	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr17_-_12920907_12920987	0.0475833	ISX	ENST00000609757.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2 	ENST00000581499.2|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2 	ENST00000580504.1|ELAC2|ENSG00000006744.14|elaC ribonuclease Z 2
hg19_v2_chr17_-_38821373_38821440	0.046964	ISX	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr1_-_150849174_150849200	0.0468425	ISX	ENST00000515192.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr6_-_33385854_33385866	0.0460622	ISX	ENST00000488478.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr1_-_150849047_150849085	0.0455014	ISX	ENST00000354396.2|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator 	ENST00000505755.1|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr8_+_38831683_38831702	0.0449806	ISX	ENST00000302495.4|HTRA4|ENSG00000169495.4|HtrA serine peptidase 4
hg19_v2_chr4_+_110736659_110736709	0.0448808	ISX	ENST00000394631.3|GAR1|ENSG00000109534.12|GAR1 ribonucleoprotein 	ENST00000226796.6|GAR1|ENSG00000109534.12|GAR1 ribonucleoprotein
hg19_v2_chrX_-_153363188_153363212	0.0448408	ISX	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr1_+_222910625_222910649	0.0446069	ISX	ENST00000360827.2|FAM177B|ENSG00000197520.6|family with sequence similarity 177, member B
hg19_v2_chr12_+_26348246_26348310	0.0434879	ISX	ENST00000422622.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr16_-_31106211_31106315	0.0432958	ISX	ENST00000532364.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000319788.7|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000529564.1|RP11-196G11.1|ENSG00000255439.2|Uncharacterized protein  	ENST00000354895.4|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1 	ENST00000394975.2|VKORC1|ENSG00000167397.10|vitamin K epoxide reductase complex, subunit 1
hg19_v2_chr7_-_2883650_2883775	0.0430987	ISX	ENST00000544127.1|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr17_+_78965624_78965694	0.0426636	ISX	ENST00000325167.5|CHMP6|ENSG00000176108.5|charged multivesicular body protein 6
hg19_v2_chrX_+_43515467_43515562	0.0421164	ISX	ENST00000338702.3|MAOA|ENSG00000189221.5|monoamine oxidase A 	ENST00000542639.1|MAOA|ENSG00000189221.5|monoamine oxidase A
hg19_v2_chr14_-_20801427_20801457	0.0416029	ISX	ENST00000557665.1|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000358932.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase 	ENST00000353689.4|CCNB1IP1|ENSG00000100814.13|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase
hg19_v2_chrX_+_77154935_77155012	0.0409175	ISX	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chrX_+_8432871_8432871	0.040801	ISX	ENST00000381032.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000453306.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000444481.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B
hg19_v2_chr8_+_22132847_22132876	0.0403887	ISX	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr7_+_144052381_144052509	0.0398903	ISX	ENST00000498580.1|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5 	ENST00000056217.5|ARHGEF5|ENSG00000050327.10|Rho guanine nucleotide exchange factor (GEF) 5
hg19_v2_chr17_-_79650818_79650954	0.0393329	ISX	ENST00000397498.4|ARL16|ENSG00000214087.4|ADP-ribosylation factor-like 16
hg19_v2_chr1_+_151735431_151735446	0.0388281	ISX	ENST00000321531.5|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3 	ENST00000315067.8|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr16_+_1359511_1359804	0.0378455	ISX	ENST00000397514.3|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000397515.2|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000567383.1|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000403747.2|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I 	ENST00000566587.1|UBE2I|ENSG00000103275.14|ubiquitin-conjugating enzyme E2I
hg19_v2_chr18_-_67624160_67624238	0.0376387	ISX	ENST00000581982.1|CD226|ENSG00000150637.4|CD226 molecule 	ENST00000280200.4|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr1_-_209824643_209824739	0.0362833	ISX	ENST00000391911.1|LAMB3|ENSG00000196878.8|laminin, beta 3 	ENST00000415782.1|LAMB3|ENSG00000196878.8|laminin, beta 3
hg19_v2_chr19_-_36001113_36001196	0.0362589	ISX	ENST00000434389.1|DMKN|ENSG00000161249.16|dermokine
hg19_v2_chr17_+_78518617_78518685	0.0359488	ISX	ENST00000537330.1|RPTOR|ENSG00000141564.9|regulatory associated protein of MTOR, complex 1 	ENST00000570891.1|RPTOR|ENSG00000141564.9|regulatory associated protein of MTOR, complex 1
hg19_v2_chr17_+_45286387_45286455	0.0348414	ISX	ENST00000572316.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000354968.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000576874.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000536623.2|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr12_+_70574088_70574135	0.0346642	ISX	ENST00000552324.1|RP11-320P7.2|ENSG00000257139.1|RP11-320P7.2
hg19_v2_chr22_+_29138013_29138072	0.0346025	ISX	ENST00000216027.3|HSCB|ENSG00000100209.5|HscB mitochondrial iron-sulfur cluster co-chaperone 	ENST00000398941.2|HSCB|ENSG00000100209.5|HscB mitochondrial iron-sulfur cluster co-chaperone
hg19_v2_chr1_-_205819245_205819272	0.0338505	ISX	ENST00000367136.4|PM20D1|ENSG00000162877.8|peptidase M20 domain containing 1
hg19_v2_chr22_-_24303340_24303373	0.0334703	ISX	ENST00000404172.3|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene) 	ENST00000290765.4|GSTT2B|ENSG00000133433.6|glutathione S-transferase theta 2B (gene/pseudogene)
hg19_v2_chr17_+_79650962_79651006	0.032897	ISX	ENST00000329138.4|HGS|ENSG00000185359.8|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v2_chr11_+_119205222_119205247	0.0315629	ISX	ENST00000311413.4|RNF26|ENSG00000173456.4|ring finger protein 26
hg19_v2_chr6_+_36562132_36562154	0.0314623	ISX	ENST00000373715.6|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3 	ENST00000339436.7|SRSF3|ENSG00000112081.12|serine/arginine-rich splicing factor 3
hg19_v2_chr6_-_33385870_33385899	0.0314377	ISX	ENST00000488034.1|CUTA|ENSG00000112514.11|cutA divalent cation tolerance homolog (E. coli)
hg19_v2_chr22_+_24322322_24322387	0.0310376	ISX	ENST00000215780.5|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2 	ENST00000402588.3|GSTT2|ENSG00000099984.6|glutathione S-transferase theta 2
hg19_v2_chr6_+_73076432_73076455	0.0302121	ISX	ENST00000414192.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chrX_-_6453159_6453159	0.0299613	ISX	ENST00000381089.3|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A 	ENST00000398729.1|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A
hg19_v2_chr19_-_46285736_46285754	0.0295393	ISX	ENST00000291270.4|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000447742.2|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000354227.5|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase
hg19_v2_chr17_+_79651007_79651138	0.0292199	ISX	ENST00000572392.1|HGS|ENSG00000185359.8|hepatocyte growth factor-regulated tyrosine kinase substrate 	ENST00000577012.1|HGS|ENSG00000185359.8|hepatocyte growth factor-regulated tyrosine kinase substrate
hg19_v2_chr1_+_28261621_28261657	0.0289421	ISX	ENST00000549094.1|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v2_chr21_+_35014783_35014816	0.0286082	ISX	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr19_+_12902289_12902310	0.0282711	ISX	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr3_+_28390637_28390705	0.0275925	ISX	ENST00000420223.1|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2 	ENST00000383768.2|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2
hg19_v2_chr14_-_73924954_73925009	0.0273944	ISX	ENST00000555307.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554818.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr4_+_155702496_155702657	0.0272567	ISX	ENST00000510397.1|RBM46|ENSG00000151962.3|RNA binding motif protein 46
hg19_v2_chr12_+_7014064_7014075	0.0272236	ISX	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr1_-_75100539_75100563	0.0268572	ISX	ENST00000420661.2|C1orf173|ENSG00000178965.9|chromosome 1 open reading frame 173
hg19_v2_chr17_-_18266660_18266756	0.0265521	ISX	ENST00000582653.1|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble) 	ENST00000352886.6|SHMT1|ENSG00000176974.13|serine hydroxymethyltransferase 1 (soluble)
hg19_v2_chr18_-_67623906_67624041	0.0265264	ISX	ENST00000583955.1|CD226|ENSG00000150637.4|CD226 molecule
hg19_v2_chr10_+_124914285_124914397	0.0263542	ISX	ENST00000407911.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chrX_+_8433376_8433467	0.0260463	ISX	ENST00000440654.2|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000381029.4|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B
hg19_v2_chrY_+_14813160_14813160	0.0255425	ISX	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr9_+_71357171_71357185	0.0255041	ISX	ENST00000440050.1|PIP5K1B|ENSG00000107242.13|phosphatidylinositol-4-phosphate 5-kinase, type I, beta
hg19_v2_chr9_+_125315391_125315391	0.0250772	ISX	ENST00000373688.2|OR1N2|ENSG00000171501.7|olfactory receptor, family 1, subfamily N, member 2
hg19_v2_chr12_-_22063787_22063912	0.0249092	ISX	ENST00000544039.1|ABCC9|ENSG00000069431.6|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
hg19_v2_chr1_-_150849208_150849244	0.0245648	ISX	ENST00000358595.5|ARNT|ENSG00000143437.16|aryl hydrocarbon receptor nuclear translocator
hg19_v2_chr4_-_177190364_177190379	0.0245404	ISX	ENST00000296525.3|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr17_-_27418537_27418537	0.0242473	ISX	ENST00000408971.2|TIAF1|ENSG00000221995.4|TGFB1-induced anti-apoptotic factor 1
hg19_v2_chr11_-_62414070_62414104	0.0237573	ISX	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr2_-_183387283_183387304	0.0236149	ISX	ENST00000435564.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr1_-_36915880_36916004	0.0233198	ISX	ENST00000445843.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr9_+_1050331_1050363	0.0232334	ISX	ENST00000382255.3|DMRT2|ENSG00000173253.10|doublesex and mab-3 related transcription factor 2 	ENST00000382251.3|DMRT2|ENSG00000173253.10|doublesex and mab-3 related transcription factor 2 	ENST00000412350.2|DMRT2|ENSG00000173253.10|doublesex and mab-3 related transcription factor 2
hg19_v2_chr13_-_88323514_88323563	0.0231822	ISX	ENST00000441617.1|MIR4500HG|ENSG00000228824.2|MIR4500 host gene (non-protein coding)
hg19_v2_chr16_+_89160269_89160349	0.0230613	ISX	ENST00000540697.1|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000406948.3|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000378345.4|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3 	ENST00000541755.2|ACSF3|ENSG00000176715.11|acyl-CoA synthetase family member 3
hg19_v2_chr7_-_36764004_36764059	0.0225726	ISX	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr10_+_124913930_124913946	0.0219019	ISX	ENST00000368858.5|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chr1_+_44115814_44115849	0.0215207	ISX	ENST00000372396.3|KDM4A|ENSG00000066135.8|lysine (K)-specific demethylase 4A
hg19_v2_chr17_-_7307358_7307456	0.021236	ISX	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr21_+_35014706_35014767	0.0208289	ISX	ENST00000399353.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000444491.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381318.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr22_-_50523760_50523787	0.0195621	ISX	ENST00000395876.2|MLC1|ENSG00000100427.11|megalencephalic leukoencephalopathy with subcortical cysts 1
hg19_v2_chr17_+_42786051_42786066	0.0195183	ISX	ENST00000315005.3|DBF4B|ENSG00000161692.13|DBF4 homolog B (S. cerevisiae)
hg19_v2_chr17_-_74733404_74733456	0.0194623	ISX	ENST00000508921.3|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000583836.1|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000358156.6|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000392485.2|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2 	ENST00000359995.5|SRSF2|ENSG00000161547.10|serine/arginine-rich splicing factor 2
hg19_v2_chr6_-_30080863_30080872	0.0188689	ISX	ENST00000540829.1|TRIM31|ENSG00000204616.6|tripartite motif containing 31
hg19_v2_chr11_-_108093329_108093375	0.018768	ISX	ENST00000278612.8|NPAT|ENSG00000149308.12|nuclear protein, ataxia-telangiectasia locus
hg19_v2_chr12_+_3000037_3000067	0.0186861	ISX	ENST00000544943.1|TULP3|ENSG00000078246.11|tubby like protein 3 	ENST00000448120.2|TULP3|ENSG00000078246.11|tubby like protein 3
hg19_v2_chr5_-_95297678_95297775	0.0181247	ISX	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr6_+_29795595_29795622	0.0175793	ISX	ENST00000360323.6|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G 	ENST00000376818.3|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G 	ENST00000376815.3|HLA-G|ENSG00000204632.7|major histocompatibility complex, class I, G
hg19_v2_chr3_-_186288097_186288113	0.0174976	ISX	ENST00000446782.1|TBCCD1|ENSG00000113838.8|TBCC domain containing 1
hg19_v2_chr4_-_174255400_174255516	0.0172781	ISX	ENST00000506267.1|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chr4_+_108911036_108911065	0.0171599	ISX	ENST00000505878.1|HADH|ENSG00000138796.11|hydroxyacyl-CoA dehydrogenase
hg19_v2_chr2_+_124782857_124782870	0.0168077	ISX	ENST00000431078.1|CNTNAP5|ENSG00000155052.14|contactin associated protein-like 5
hg19_v2_chr3_+_113775576_113775592	0.0167266	ISX	ENST00000485050.1|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1 	ENST00000281273.4|QTRTD1|ENSG00000151576.6|queuine tRNA-ribosyltransferase domain containing 1
hg19_v2_chr5_-_159846399_159846412	0.0166594	ISX	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr19_-_14945933_14945972	0.0165467	ISX	ENST00000322301.3|OR7A5|ENSG00000188269.4|olfactory receptor, family 7, subfamily A, member 5
hg19_v2_chr11_+_5712234_5712264	0.016485	ISX	ENST00000414641.1|TRIM22|ENSG00000132274.11|tripartite motif containing 22
hg19_v2_chr17_+_45286706_45286766	0.0163372	ISX	ENST00000393450.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic 	ENST00000572303.1|MYL4|ENSG00000198336.5|myosin, light chain 4, alkali; atrial, embryonic
hg19_v2_chr19_+_50270219_50270391	0.0159439	ISX	ENST00000354293.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit 	ENST00000359032.5|AP2A1|ENSG00000196961.8|adaptor-related protein complex 2, alpha 1 subunit
hg19_v2_chr16_+_2479390_2479409	0.0157858	ISX	ENST00000397066.4|CCNF|ENSG00000162063.8|cyclin F
hg19_v2_chr13_+_73632897_73632930	0.0149472	ISX	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr7_-_143892748_143892748	0.0144964	ISX	ENST00000378115.2|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr1_-_158173659_158173674	0.0144383	ISX	ENST00000415019.1|RP11-404O13.5|ENSG00000176320.2|RP11-404O13.5
hg19_v2_chr7_+_142985308_142985453	0.01421	ISX	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr10_-_114206649_114206688	0.0139508	ISX	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr5_-_159546396_159546470	0.013902	ISX	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr3_-_160823158_160823177	0.0138531	ISX	ENST00000392779.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392780.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000494173.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr8_+_9953061_9953097	0.0127989	ISX	ENST00000522907.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A 	ENST00000528246.1|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr22_-_24316648_24316773	0.0126341	ISX	ENST00000403754.3|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000430101.2|DDT|ENSG00000099977.9|D-dopachrome tautomerase 	ENST00000398344.4|DDT|ENSG00000099977.9|D-dopachrome tautomerase
hg19_v2_chr6_-_10115007_10115007	0.0118066	ISX	ENST00000485268.1|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr12_+_48499252_48499404	0.0115657	ISX	ENST00000549003.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000550924.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr4_-_66536057_66536071	0.0114493	ISX	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_+_47533160_47533160	0.011242	ISX	ENST00000334194.3|CYP4Z1|ENSG00000186160.4|cytochrome P450, family 4, subfamily Z, polypeptide 1
hg19_v2_chr3_+_115342349_115342373	0.0107171	ISX	ENST00000393780.3|GAP43|ENSG00000172020.8|growth associated protein 43
hg19_v2_chr1_+_23345930_23345941	0.0106268	ISX	ENST00000356634.3|KDM1A|ENSG00000004487.11|lysine (K)-specific demethylase 1A
hg19_v2_chr7_+_120628731_120628818	0.0104454	ISX	ENST00000310396.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chrX_+_108779004_108779015	0.00996202	ISX	ENST00000218004.1|NXT2|ENSG00000101888.7|nuclear transport factor 2-like export factor 2
hg19_v2_chr2_-_198540751_198540790	0.009318	ISX	ENST00000429081.1|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr14_+_91591873_91591888	0.00916805	ISX	ENST00000521064.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr20_-_50418947_50418964	0.00905532	ISX	ENST00000371539.3|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr17_+_73452545_73452685	0.00864595	ISX	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr20_+_2082494_2082528	0.00838955	ISX	ENST00000246032.3|STK35|ENSG00000125834.8|serine/threonine kinase 35
hg19_v2_chr4_-_122686261_122686340	0.00825854	ISX	ENST00000337677.5|TMEM155|ENSG00000164112.8|transmembrane protein 155
hg19_v2_chr2_-_242089677_242089695	0.00798679	ISX	ENST00000405260.1|PASK|ENSG00000115687.9|PAS domain containing serine/threonine kinase
hg19_v2_chr19_+_4153598_4153665	0.00785771	ISX	ENST00000078445.2|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000252587.3|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000595923.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602257.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3 	ENST00000602147.1|CREB3L3|ENSG00000060566.9|cAMP responsive element binding protein 3-like 3
hg19_v2_chr3_+_63638372_63638390	0.00767216	ISX	ENST00000496807.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chr19_-_14785622_14785667	0.00717447	ISX	ENST00000443157.2|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chr11_+_33061543_33061585	0.00586823	ISX	ENST00000432887.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000528898.1|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1 	ENST00000531632.2|TCP11L1|ENSG00000176148.11|t-complex 11, testis-specific-like 1
hg19_v2_chr12_-_50790267_50790405	0.00541579	ISX	ENST00000327337.5|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A 	ENST00000543111.1|FAM186A|ENSG00000185958.5|family with sequence similarity 186, member A
hg19_v2_chr10_+_124913793_124913927	0.00537044	ISX	ENST00000368865.4|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000538238.1|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein 	ENST00000368859.2|BUB3|ENSG00000154473.13|BUB3 mitotic checkpoint protein
hg19_v2_chrX_+_37639302_37639326	0.00496861	ISX	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr19_-_14785674_14785685	0.00493136	ISX	ENST00000253673.5|EMR3|ENSG00000131355.10|egf-like module containing, mucin-like, hormone receptor-like 3
hg19_v2_chr1_-_159832438_159832449	0.0045946	ISX	ENST00000368100.1|VSIG8|ENSG00000243284.1|V-set and immunoglobulin domain containing 8
hg19_v2_chr13_+_40229764_40229869	0.00451298	ISX	ENST00000416691.1|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000422759.2|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6 	ENST00000455146.3|COG6|ENSG00000133103.12|component of oligomeric golgi complex 6
hg19_v2_chr16_+_3493611_3493732	0.00429558	ISX	ENST00000407558.4|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572169.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000572757.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000608722.1|NAA60|ENSG00000262621.2|N-alpha-acetyltransferase 60  	ENST00000573593.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000570372.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000424546.2|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000575733.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000573201.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000574950.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit 	ENST00000573580.1|NAA60|ENSG00000122390.13|N(alpha)-acetyltransferase 60, NatF catalytic subunit
hg19_v2_chr9_+_130159433_130159461	0.00406946	ISX	ENST00000451404.1|SLC2A8|ENSG00000136856.13|solute carrier family 2 (facilitated glucose transporter), member 8
hg19_v2_chr19_-_51071302_51071302	0.00353422	ISX	ENST00000389201.3|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B 	ENST00000600381.1|LRRC4B|ENSG00000131409.8|leucine rich repeat containing 4B
hg19_v2_chr1_-_249111272_249111272	0.00343273	ISX	ENST00000411742.2|SH3BP5L|ENSG00000175137.9|SH3-binding domain protein 5-like
hg19_v2_chr9_+_104296163_104296187	0.00304662	ISX	ENST00000374819.2|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase 	ENST00000479306.1|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr17_-_48785216_48785291	0.00299173	ISX	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr7_-_143991230_143991230	0.00294277	ISX	ENST00000543357.1|ARHGEF35|ENSG00000213214.3|Rho guanine nucleotide exchange factor (GEF) 35
hg19_v2_chr8_+_9953214_9953237	0.00277145	ISX	ENST00000382490.5|MSRA|ENSG00000175806.10|methionine sulfoxide reductase A
hg19_v2_chr19_+_1275917_1275952	0.0021782	ISX	ENST00000469144.1|C19orf24|ENSG00000228300.9|chromosome 19 open reading frame 24
hg19_v2_chr3_-_129147432_129147494	0.00217146	ISX	ENST00000503957.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000505956.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000326085.3|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12
hg19_v2_chr7_+_150929550_150929619	0.00184036	ISX	ENST00000482173.1|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2 	ENST00000495645.1|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2 	ENST00000035307.2|CHPF2|ENSG00000033100.10|chondroitin polymerizing factor 2
hg19_v2_chr6_-_111927062_111927125	0.00160984	ISX	ENST00000359831.4|TRAF3IP2|ENSG00000056972.14|TRAF3 interacting protein 2
hg19_v2_chr10_-_99447024_99447080	0.00117179	ISX	ENST00000370626.3|AVPI1|ENSG00000119986.6|arginine vasopressin-induced 1
hg19_v2_chr19_-_6424783_6424805	0.00104395	ISX	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr10_+_135160844_135160869	0.000932284	ISX	ENST00000423766.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1 	ENST00000458230.1|PRAP1|ENSG00000165828.9|proline-rich acidic protein 1
hg19_v2_chr5_+_174151536_174151610	0.000680429	ISX	ENST00000239243.6|MSX2|ENSG00000120149.7|msh homeobox 2 	ENST00000507785.1|MSX2|ENSG00000120149.7|msh homeobox 2
hg19_v2_chr22_-_32767017_32767063	0.00026228	ISX	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
