hg19_v2_chr9_+_97562440_97562463	0.190039	HOXD4	ENST00000395357.2|C9orf3|ENSG00000148120.10|chromosome 9 open reading frame 3
hg19_v2_chr4_-_103940791_103940896	0.152541	HOXD4	ENST00000510559.1|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENST00000394789.3|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1 	ENST00000296422.7|SLC9B1|ENSG00000164037.12|solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
hg19_v2_chr5_+_102200948_102201183	0.136654	HOXD4	ENST00000511477.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000506006.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000509832.1|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr3_-_195310802_195310818	0.110962	HOXD4	ENST00000421243.1|APOD|ENSG00000189058.4|apolipoprotein D 	ENST00000453131.1|APOD|ENSG00000189058.4|apolipoprotein D
hg19_v2_chr16_-_21663950_21663981	0.108922	HOXD4	ENST00000268389.4|IGSF6|ENSG00000140749.7|immunoglobulin superfamily, member 6
hg19_v2_chr6_+_46761118_46761132	0.100777	HOXD4	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr5_-_54988559_54988576	0.0875857	HOXD4	ENST00000502247.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chrX_+_37865804_37865842	0.0832975	HOXD4	ENST00000297875.2|SYTL5|ENSG00000147041.7|synaptotagmin-like 5 	ENST00000357972.5|SYTL5|ENSG00000147041.7|synaptotagmin-like 5
hg19_v2_chr6_+_130339710_130339745	0.0782671	HOXD4	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chr2_+_190541153_190541177	0.0732566	HOXD4	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr5_+_111755280_111755280	0.0730577	HOXD4	ENST00000600409.1|EPB41L4A-AS2|ENSG00000268358.1|EPB41L4A antisense RNA 2 (head to head)
hg19_v2_chr2_-_203735484_203735539	0.0716156	HOXD4	ENST00000420558.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000418208.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr13_-_54706954_54707048	0.0705426	HOXD4	ENST00000606706.1|LINC00458|ENSG00000234787.3|long intergenic non-protein coding RNA 458 	ENST00000607494.1|LINC00458|ENSG00000234787.3|long intergenic non-protein coding RNA 458 	ENST00000427299.2|LINC00458|ENSG00000234787.3|long intergenic non-protein coding RNA 458 	ENST00000423442.2|LINC00458|ENSG00000234787.3|long intergenic non-protein coding RNA 458 	ENST00000451744.1|LINC00458|ENSG00000234787.3|long intergenic non-protein coding RNA 458
hg19_v2_chr11_-_77790865_77790934	0.0687708	HOXD4	ENST00000534029.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000525085.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000527806.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000528251.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough 	ENST00000528164.1|NDUFC2|ENSG00000151366.8|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa 	ENST00000530054.1|NDUFC2-KCTD14|ENSG00000259112.1|NDUFC2-KCTD14 readthrough
hg19_v2_chr13_+_51913819_51913838	0.0686558	HOXD4	ENST00000419898.2|SERPINE3|ENSG00000253309.2|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3
hg19_v2_chr12_-_118628315_118628348	0.0657887	HOXD4	ENST00000540561.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr5_-_39274617_39274636	0.0636897	HOXD4	ENST00000510188.1|FYB|ENSG00000082074.11|FYN binding protein
hg19_v2_chrX_+_56590002_56590072	0.0627751	HOXD4	ENST00000338222.5|UBQLN2|ENSG00000188021.7|ubiquilin 2
hg19_v2_chr3_+_177159695_177159709	0.0622696	HOXD4	ENST00000442937.1|LINC00578|ENSG00000228221.1|long intergenic non-protein coding RNA 578
hg19_v2_chr5_+_67586465_67586534	0.0620714	HOXD4	ENST00000336483.5|PIK3R1|ENSG00000145675.10|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
hg19_v2_chr6_-_26250835_26250874	0.0615898	HOXD4	ENST00000446824.2|HIST1H3F|ENSG00000256316.1|histone cluster 1, H3f
hg19_v2_chr5_+_59783941_59784066	0.0570916	HOXD4	ENST00000506884.1|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding) 	ENST00000504876.2|PART1|ENSG00000152931.7|prostate androgen-regulated transcript 1 (non-protein coding)
hg19_v2_chr2_-_203735586_203735769	0.0563731	HOXD4	ENST00000454326.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000432273.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000450143.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000411681.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr4_-_185694872_185695027	0.0557265	HOXD4	ENST00000505492.1|ACSL1|ENSG00000151726.9|acyl-CoA synthetase long-chain family member 1
hg19_v2_chr1_-_101360205_101360231	0.0548393	HOXD4	ENST00000450240.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr11_-_104972158_104972190	0.0545004	HOXD4	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr8_-_102803163_102803211	0.0523171	HOXD4	ENST00000523645.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000520346.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000220931.6|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522448.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522951.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522252.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000519098.1|NCALD|ENSG00000104490.13|neurocalcin delta
hg19_v2_chr2_-_207078086_207078106	0.0521234	HOXD4	ENST00000442134.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr5_+_95066823_95066879	0.0517065	HOXD4	ENST00000506817.1|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3 	ENST00000379982.3|RHOBTB3|ENSG00000164292.8|Rho-related BTB domain containing 3
hg19_v2_chr4_-_105416039_105416065	0.0513649	HOXD4	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr4_+_183065793_183065864	0.0507956	HOXD4	ENST00000512480.1|TENM3|ENSG00000218336.3|teneurin transmembrane protein 3
hg19_v2_chr11_-_64684672_64684722	0.0502658	HOXD4	ENST00000377264.3|ATG2A|ENSG00000110046.8|autophagy related 2A 	ENST00000421419.2|ATG2A|ENSG00000110046.8|autophagy related 2A
hg19_v2_chr18_-_19283649_19283830	0.049917	HOXD4	ENST00000584464.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3 	ENST00000578270.1|ABHD3|ENSG00000158201.5|abhydrolase domain containing 3
hg19_v2_chr8_-_18871159_18871201	0.0485853	HOXD4	ENST00000327040.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3 	ENST00000440756.2|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr13_+_37581115_37581115	0.0470277	HOXD4	ENST00000481013.1|EXOSC8|ENSG00000120699.8|exosome component 8
hg19_v2_chr3_+_140981456_140981508	0.0458772	HOXD4	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chr11_-_89224299_89224466	0.0454106	HOXD4	ENST00000343727.5|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000531342.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000375979.3|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr19_+_50016610_50016658	0.0446964	HOXD4	ENST00000596975.1|FCGRT|ENSG00000104870.8|Fc fragment of IgG, receptor, transporter, alpha
hg19_v2_chr1_-_101360374_101360419	0.0445313	HOXD4	ENST00000535414.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr8_-_72274467_72274490	0.0442466	HOXD4	ENST00000340726.3|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr13_+_110958124_110958159	0.0442335	HOXD4	ENST00000400163.2|COL4A2|ENSG00000134871.13|collagen, type IV, alpha 2
hg19_v2_chrX_-_92928557_92928613	0.0437046	HOXD4	ENST00000373079.3|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3 	ENST00000475430.2|NAP1L3|ENSG00000186310.9|nucleosome assembly protein 1-like 3
hg19_v2_chr8_+_42873548_42873567	0.0436641	HOXD4	ENST00000533338.1|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3 	ENST00000534420.1|RP11-598P20.5|ENSG00000254673.1|Uncharacterized protein
hg19_v2_chr1_+_159750776_159750808	0.0433594	HOXD4	ENST00000368107.1|DUSP23|ENSG00000158716.4|dual specificity phosphatase 23
hg19_v2_chr11_-_16419067_16419108	0.0432157	HOXD4	ENST00000533411.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr2_-_175462456_175462512	0.0428269	HOXD4	ENST00000409891.1|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1 	ENST00000410117.1|WIPF1|ENSG00000115935.12|WAS/WASL interacting protein family, member 1
hg19_v2_chr1_-_101360331_101360373	0.0427561	HOXD4	ENST00000416479.1|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2 	ENST00000370113.3|EXTL2|ENSG00000162694.9|exostosin-like glycosyltransferase 2
hg19_v2_chr3_-_178103144_178103205	0.0417831	HOXD4	ENST00000417383.1|RP11-33A14.1|ENSG00000223930.1|RP11-33A14.1	ENST00000418585.1|RP11-33A14.1|ENSG00000223930.1|RP11-33A14.1	ENST00000411727.1|RP11-33A14.1|ENSG00000223930.1|RP11-33A14.1	ENST00000439810.1|RP11-33A14.1|ENSG00000223930.1|RP11-33A14.1
hg19_v2_chr4_-_186570679_186570760	0.0407834	HOXD4	ENST00000451974.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr15_+_84115868_84115980	0.0405999	HOXD4	ENST00000427482.2|SH3GL3|ENSG00000140600.12|SH3-domain GRB2-like 3
hg19_v2_chr2_-_228497888_228498036	0.0400738	HOXD4	ENST00000264387.4|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83 	ENST00000409066.1|C2orf83|ENSG00000042304.6|chromosome 2 open reading frame 83
hg19_v2_chrX_+_139791917_139791938	0.0400346	HOXD4	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chr3_+_97483572_97483644	0.0398726	HOXD4	ENST00000335979.2|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6 	ENST00000394206.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6
hg19_v2_chr8_-_116504448_116504481	0.039642	HOXD4	ENST00000518018.1|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr2_-_99279928_99279942	0.0387073	HOXD4	ENST00000414521.2|MGAT4A|ENSG00000071073.8|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A
hg19_v2_chr2_-_207078154_207078169	0.0380878	HOXD4	ENST00000447845.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr2_-_159237472_159237472	0.0371356	HOXD4	ENST00000409187.1|CCDC148|ENSG00000153237.13|coiled-coil domain containing 148
hg19_v2_chr7_+_77428066_77428132	0.0370947	HOXD4	ENST00000422959.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000307305.8|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000424760.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr12_+_9066472_9066492	0.0363249	HOXD4	ENST00000538657.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila)
hg19_v2_chr18_-_74839891_74839921	0.0361285	HOXD4	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr7_+_77428149_77428220	0.035659	HOXD4	ENST00000415251.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000275575.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr5_+_68860949_68860949	0.0355091	HOXD4	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr16_-_29910853_29910903	0.0350252	HOXD4	ENST00000308713.5|SEZ6L2|ENSG00000174938.10|seizure related 6 homolog (mouse)-like 2
hg19_v2_chr18_-_21891460_21891506	0.0339678	HOXD4	ENST00000357041.4|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr18_+_29027696_29027774	0.0330661	HOXD4	ENST00000257189.4|DSG3|ENSG00000134757.4|desmoglein 3
hg19_v2_chr3_+_142342240_142342249	0.0316306	HOXD4	ENST00000497199.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr13_+_33160553_33160564	0.0311135	HOXD4	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr19_-_5903714_5903809	0.0310442	HOXD4	ENST00000586349.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000585661.1|AC024592.12|ENSG00000267740.1|Uncharacterized protein  	ENST00000308961.4|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000592634.1|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000418389.2|NDUFA11|ENSG00000174886.8|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa 	ENST00000252675.5|FUT5|ENSG00000130383.6|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)
hg19_v2_chr19_+_48828582_48828637	0.0310341	HOXD4	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr1_+_84630645_84630652	0.0309517	HOXD4	ENST00000394839.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr10_+_95848824_95848852	0.030355	HOXD4	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr1_-_151762900_151762910	0.0302885	HOXD4	ENST00000440583.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr2_+_32502952_32503025	0.0295675	HOXD4	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr15_-_50558223_50558263	0.029408	HOXD4	ENST00000267845.3|HDC|ENSG00000140287.6|histidine decarboxylase
hg19_v2_chr5_+_157158205_157158205	0.0289353	HOXD4	ENST00000231198.7|THG1L|ENSG00000113272.9|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
hg19_v2_chr20_+_18447771_18447771	0.0279906	HOXD4	ENST00000377603.4|POLR3F|ENSG00000132664.7|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
hg19_v2_chr8_-_124279627_124279627	0.0274494	HOXD4	ENST00000357082.4|ZHX1-C8ORF76|ENSG00000259305.1|ZHX1-C8ORF76 readthrough
hg19_v2_chr6_-_26108355_26108371	0.0273549	HOXD4	ENST00000338379.4|HIST1H1T|ENSG00000187475.4|histone cluster 1, H1t
hg19_v2_chr12_+_28605426_28605475	0.0267013	HOXD4	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr11_-_89224638_89224653	0.0259088	HOXD4	ENST00000535633.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000263317.4|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr11_+_101983176_101983245	0.0257002	HOXD4	ENST00000524575.1|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chr9_+_130026756_130026871	0.0240158	HOXD4	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr7_-_77427676_77427897	0.0238029	HOXD4	ENST00000257663.3|TMEM60|ENSG00000135211.5|transmembrane protein 60
hg19_v2_chr3_-_149293990_149294039	0.0233697	HOXD4	ENST00000472417.1|WWTR1|ENSG00000018408.10|WW domain containing transcription regulator 1
hg19_v2_chr4_+_130014836_130014912	0.0228691	HOXD4	ENST00000502887.1|C4orf33|ENSG00000151470.8|chromosome 4 open reading frame 33
hg19_v2_chr1_-_231560790_231560790	0.022075	HOXD4	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr2_+_166095898_166095940	0.0219212	HOXD4	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr2_+_171034646_171034706	0.0216811	HOXD4	ENST00000409044.3|MYO3B|ENSG00000071909.14|myosin IIIB 	ENST00000408978.4|MYO3B|ENSG00000071909.14|myosin IIIB
hg19_v2_chr1_-_92952433_92952489	0.0213055	HOXD4	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr14_+_23067146_23067160	0.0208469	HOXD4	ENST00000428304.2|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr1_-_151762943_151763012	0.0208409	HOXD4	ENST00000368825.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368823.1|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000458431.2|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368827.6|TDRKH|ENSG00000182134.11|tudor and KH domain containing 	ENST00000368824.3|TDRKH|ENSG00000182134.11|tudor and KH domain containing
hg19_v2_chr1_-_9953295_9953320	0.02072	HOXD4	ENST00000377258.1|CTNNBIP1|ENSG00000178585.10|catenin, beta interacting protein 1
hg19_v2_chr7_+_120629653_120629833	0.0204762	HOXD4	ENST00000450913.2|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1 	ENST00000340646.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chr22_+_44427230_44427253	0.0200028	HOXD4	ENST00000444029.1|PARVB|ENSG00000188677.10|parvin, beta
hg19_v2_chr17_-_26733179_26733237	0.0194892	HOXD4	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr14_+_23067166_23067219	0.0192426	HOXD4	ENST00000216327.6|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4 	ENST00000542041.1|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr5_-_111754948_111755013	0.019212	HOXD4	ENST00000261486.5|EPB41L4A|ENSG00000129595.8|erythrocyte membrane protein band 4.1 like 4A
hg19_v2_chr10_-_52008313_52008370	0.0190927	HOXD4	ENST00000329428.6|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000395526.4|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000447815.1|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v2_chr16_+_87636474_87636533	0.0187667	HOXD4	ENST00000284262.2|JPH3|ENSG00000154118.8|junctophilin 3
hg19_v2_chr15_-_54025300_54025380	0.0186683	HOXD4	ENST00000559418.1|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr3_-_18480260_18480269	0.0181776	HOXD4	ENST00000454909.2|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr2_+_109237717_109237729	0.0180026	HOXD4	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_202385953_202385994	0.0175911	HOXD4	ENST00000466968.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr10_-_14372870_14372944	0.0172215	HOXD4	ENST00000357447.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr7_+_55433131_55433142	0.0171527	HOXD4	ENST00000254770.2|LANCL2|ENSG00000132434.5|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v2_chr1_+_209602771_209602908	0.0168343	HOXD4	ENST00000440276.1|MIR205HG|ENSG00000230937.5|MIR205 host gene (non-protein coding)
hg19_v2_chr16_+_24549014_24549082	0.0167317	HOXD4	ENST00000564314.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6 	ENST00000567686.1|RBBP6|ENSG00000122257.14|retinoblastoma binding protein 6
hg19_v2_chr1_+_117963209_117963245	0.0160218	HOXD4	ENST00000449370.2|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr8_+_79503458_79503473	0.0160137	HOXD4	ENST00000518467.1|PKIA|ENSG00000171033.8|protein kinase (cAMP-dependent, catalytic) inhibitor alpha
hg19_v2_chr13_+_20207782_20207841	0.0158272	HOXD4	ENST00000414242.2|MPHOSPH8|ENSG00000196199.9|M-phase phosphoprotein 8 	ENST00000361479.5|MPHOSPH8|ENSG00000196199.9|M-phase phosphoprotein 8
hg19_v2_chr11_-_36310958_36310999	0.0155153	HOXD4	ENST00000532705.1|COMMD9|ENSG00000110442.7|COMM domain containing 9 	ENST00000263401.5|COMMD9|ENSG00000110442.7|COMM domain containing 9 	ENST00000452374.2|COMMD9|ENSG00000110442.7|COMM domain containing 9
hg19_v2_chr11_-_72492878_72492899	0.0153397	HOXD4	ENST00000535054.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10 	ENST00000545082.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10
hg19_v2_chr17_-_73844722_73844751	0.0151117	HOXD4	ENST00000586257.1|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chr20_+_32150140_32150230	0.0149039	HOXD4	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr6_-_36515177_36515270	0.01467	HOXD4	ENST00000229812.7|STK38|ENSG00000112079.8|serine/threonine kinase 38
hg19_v2_chr1_+_149754227_149754246	0.014528	HOXD4	ENST00000444948.1|FCGR1A|ENSG00000150337.9|Fc fragment of IgG, high affinity Ia, receptor (CD64) 	ENST00000369168.4|FCGR1A|ENSG00000150337.9|Fc fragment of IgG, high affinity Ia, receptor (CD64)
hg19_v2_chr6_+_53659746_53659817	0.0144002	HOXD4	ENST00000370888.1|LRRC1|ENSG00000137269.10|leucine rich repeat containing 1
hg19_v2_chrX_+_77166172_77166261	0.0143483	HOXD4	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr8_+_107738343_107738413	0.0142344	HOXD4	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr18_-_51750948_51751059	0.0141603	HOXD4	ENST00000583046.1|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2 	ENST00000398398.2|MBD2|ENSG00000134046.7|methyl-CpG binding domain protein 2
hg19_v2_chr1_+_42846443_42846502	0.0141197	HOXD4	ENST00000410070.2|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A 	ENST00000431473.3|RIMKLA|ENSG00000177181.10|ribosomal modification protein rimK-like family member A
hg19_v2_chr4_-_85771168_85771168	0.0141179	HOXD4	ENST00000514071.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr19_-_14064114_14064204	0.0141119	HOXD4	ENST00000585607.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538517.2|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000587458.1|PODNL1|ENSG00000132000.7|podocan-like 1 	ENST00000538371.2|PODNL1|ENSG00000132000.7|podocan-like 1
hg19_v2_chr2_-_190927447_190927466	0.0140932	HOXD4	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr5_-_54988448_54988545	0.014036	HOXD4	ENST00000503817.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9 	ENST00000512595.1|SLC38A9|ENSG00000177058.7|solute carrier family 38, member 9
hg19_v2_chr2_+_187371440_187371567	0.0139793	HOXD4	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr3_-_124774802_124774852	0.013638	HOXD4	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr1_+_186798073_186798147	0.0135564	HOXD4	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr3_-_126327398_126327398	0.0134657	HOXD4	ENST00000383572.2|TXNRD3NB|ENSG00000206483.4|thioredoxin reductase 3 neighbor
hg19_v2_chr15_+_64386261_64386322	0.0134075	HOXD4	ENST00000560829.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr5_+_140762268_140762467	0.0128215	HOXD4	ENST00000518325.1|PCDHGA7|ENSG00000253537.1|protocadherin gamma subfamily A, 7
hg19_v2_chrX_-_10645773_10645795	0.0125393	HOXD4	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr5_+_140743859_140743898	0.0121789	HOXD4	ENST00000518069.1|PCDHGA5|ENSG00000253485.1|protocadherin gamma subfamily A, 5
hg19_v2_chr11_-_89224508_89224563	0.011868	HOXD4	ENST00000525196.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr2_-_160472952_160473080	0.0114718	HOXD4	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr12_+_32654965_32654977	0.0113349	HOXD4	ENST00000472289.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr6_-_15548591_15548607	0.0110223	HOXD4	ENST00000509674.1|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr2_+_158114051_158114110	0.0110216	HOXD4	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr12_+_12938541_12938600	0.0109292	HOXD4	ENST00000356591.4|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr7_-_104909435_104909535	0.0102	HOXD4	ENST00000357311.3|SRPK2|ENSG00000135250.12|SRSF protein kinase 2
hg19_v2_chr13_-_61989655_61989655	0.0101839	HOXD4	ENST00000409204.4|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr2_+_191045656_191045708	0.0096959	HOXD4	ENST00000443551.2|C2orf88|ENSG00000187699.6|chromosome 2 open reading frame 88
hg19_v2_chr4_-_130014705_130014728	0.00950334	HOXD4	ENST00000503401.1|SCLT1|ENSG00000151466.7|sodium channel and clathrin linker 1
hg19_v2_chr14_-_24911971_24912015	0.0090637	HOXD4	ENST00000555365.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000399395.3|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr15_-_55700457_55700520	0.00894251	HOXD4	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr11_-_89224139_89224162	0.00887015	HOXD4	ENST00000413594.2|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr8_+_28196157_28196204	0.00885529	HOXD4	ENST00000522209.1|PNOC|ENSG00000168081.4|prepronociceptin
hg19_v2_chr20_-_43729750_43729774	0.00885104	HOXD4	ENST00000537075.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1 	ENST00000306117.1|KCNS1|ENSG00000124134.4|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1
hg19_v2_chr11_-_89224488_89224507	0.0085718	HOXD4	ENST00000534731.1|NOX4|ENSG00000086991.8|NADPH oxidase 4 	ENST00000527626.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr19_+_30433110_30433214	0.00845721	HOXD4	ENST00000542441.2|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone 	ENST00000392271.1|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr15_+_80364901_80364932	0.00804549	HOXD4	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr1_-_234831899_234831901	0.00794859	HOXD4	ENST00000442382.1|RP4-781K5.6|ENSG00000230628.1|RP4-781K5.6
hg19_v2_chrX_+_149867681_149867743	0.00793906	HOXD4	ENST00000438018.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1 	ENST00000436701.1|MTMR1|ENSG00000063601.12|myotubularin related protein 1
hg19_v2_chr9_+_273038_273076	0.00792424	HOXD4	ENST00000487230.1|DOCK8|ENSG00000107099.11|dedicator of cytokinesis 8 	ENST00000469391.1|DOCK8|ENSG00000107099.11|dedicator of cytokinesis 8
hg19_v2_chr1_+_214161854_214161892	0.00791091	HOXD4	ENST00000435016.1|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr11_-_89223883_89223904	0.00766094	HOXD4	ENST00000528341.1|NOX4|ENSG00000086991.8|NADPH oxidase 4
hg19_v2_chr2_+_234590556_234590584	0.00748195	HOXD4	ENST00000373426.3|UGT1A7|ENSG00000244122.2|UDP glucuronosyltransferase 1 family, polypeptide A7
hg19_v2_chr19_+_48828788_48828865	0.00743581	HOXD4	ENST00000594198.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000597279.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000593437.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr3_-_4508925_4508965	0.00695077	HOXD4	ENST00000534863.1|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000383843.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000458465.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000405420.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000272902.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1
hg19_v2_chr14_+_61449076_61449109	0.00660332	HOXD4	ENST00000526105.1|SLC38A6|ENSG00000139974.11|solute carrier family 38, member 6
hg19_v2_chr14_-_101036119_101036131	0.00654491	HOXD4	ENST00000355173.2|BEGAIN|ENSG00000183092.11|brain-enriched guanylate kinase-associated
hg19_v2_chr2_-_166060571_166060582	0.0064271	HOXD4	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr1_+_150039787_150039873	0.00616945	HOXD4	ENST00000535106.1|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v2_chr10_+_13652047_13652047	0.00616	HOXD4	ENST00000601460.1|RP11-295P9.3|ENSG00000239665.4|Uncharacterized protein
hg19_v2_chr5_+_52083730_52083821	0.00596098	HOXD4	ENST00000282588.6|ITGA1|ENSG00000213949.4|integrin, alpha 1 	ENST00000274311.2|PELO|ENSG00000152684.10|pelota homolog (Drosophila)
hg19_v2_chr3_+_15045419_15045433	0.00588794	HOXD4	ENST00000406272.2|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr6_-_44281043_44281091	0.00582499	HOXD4	ENST00000244571.4|AARS2|ENSG00000124608.4|alanyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr6_-_49712147_49712158	0.00570848	HOXD4	ENST00000433368.2|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3 	ENST00000354620.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr16_-_15736953_15737025	0.0055737	HOXD4	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr9_+_470288_470336	0.00553598	HOXD4	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr2_-_160473114_160473203	0.00529257	HOXD4	ENST00000392783.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr4_-_39979576_39979588	0.0051095	HOXD4	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr17_-_29624343_29624429	0.0050447	HOXD4	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr10_+_18629628_18629672	0.004899	HOXD4	ENST00000377329.4|CACNB2|ENSG00000165995.14|calcium channel, voltage-dependent, beta 2 subunit
hg19_v2_chr4_-_152149033_152149182	0.00482756	HOXD4	ENST00000514152.1|SH3D19|ENSG00000109686.12|SH3 domain containing 19
hg19_v2_chr17_+_68164752_68164814	0.00479526	HOXD4	ENST00000535240.1|KCNJ2|ENSG00000123700.4|potassium inwardly-rectifying channel, subfamily J, member 2
hg19_v2_chr20_-_45980621_45980649	0.00473906	HOXD4	ENST00000446894.1|ZMYND8|ENSG00000101040.15|zinc finger, MYND-type containing 8
hg19_v2_chr11_-_102714534_102714534	0.0047299	HOXD4	ENST00000299855.5|MMP3|ENSG00000149968.7|matrix metallopeptidase 3 (stromelysin 1, progelatinase)
hg19_v2_chr22_-_29107919_29108032	0.00472724	HOXD4	ENST00000434810.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000456369.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr15_-_64385981_64386077	0.00460252	HOXD4	ENST00000557835.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000380290.3|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A 	ENST00000559950.1|FAM96A|ENSG00000166797.6|family with sequence similarity 96, member A
hg19_v2_chr17_+_66521936_66522026	0.00446959	HOXD4	ENST00000592800.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr1_-_238108575_238108575	0.0041459	HOXD4	ENST00000604646.1|MTRNR2L11|ENSG00000270188.1|MT-RNR2-like 11 (pseudogene)
hg19_v2_chr12_-_81763184_81763202	0.00400171	HOXD4	ENST00000548670.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000541570.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000553058.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr2_-_176046391_176046445	0.00392653	HOXD4	ENST00000392541.3|ATP5G3|ENSG00000154518.5|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9) 	ENST00000409194.1|ATP5G3|ENSG00000154518.5|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
hg19_v2_chr15_-_65809991_65810037	0.00371143	HOXD4	ENST00000559526.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000358939.4|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000560665.1|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000321118.7|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000339244.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8 	ENST00000300141.6|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr9_-_107361788_107361788	0.00363639	HOXD4	ENST00000374779.2|OR13C5|ENSG00000255800.1|olfactory receptor, family 13, subfamily C, member 5
hg19_v2_chr2_+_170440844_170440897	0.00353404	HOXD4	ENST00000260970.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000433207.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000409714.3|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G) 	ENST00000462903.1|PPIG|ENSG00000138398.11|peptidylprolyl isomerase G (cyclophilin G)
hg19_v2_chr2_-_208030295_208030332	0.00310485	HOXD4	ENST00000458272.1|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr3_+_63638339_63638365	0.00309495	HOXD4	ENST00000343837.3|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein 	ENST00000469440.1|SNTN|ENSG00000188817.3|sentan, cilia apical structure protein
hg19_v2_chr7_+_29186192_29186222	0.00308933	HOXD4	ENST00000539406.1|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr2_+_110656005_110656005	0.0029524	HOXD4	ENST00000437679.2|LIMS3|ENSG00000256977.6|LIM and senescent cell antigen-like domains 3
hg19_v2_chr18_+_22040620_22040693	0.00290899	HOXD4	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr10_+_86184676_86184714	0.00285005	HOXD4	ENST00000543283.1|CCSER2|ENSG00000107771.11|coiled-coil serine-rich protein 2
hg19_v2_chr20_+_5931497_5931592	0.00284683	HOXD4	ENST00000378886.2|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8 	ENST00000265187.4|MCM8|ENSG00000125885.9|minichromosome maintenance complex component 8
hg19_v2_chr3_-_18480173_18480189	0.00260307	HOXD4	ENST00000414509.1|SATB1|ENSG00000182568.12|SATB homeobox 1
hg19_v2_chr1_-_28384598_28384680	0.0025357	HOXD4	ENST00000373864.1|EYA3|ENSG00000158161.11|eyes absent homolog 3 (Drosophila)
hg19_v2_chrX_-_13835147_13835224	0.00246261	HOXD4	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr4_-_46996424_46996424	0.00235343	HOXD4	ENST00000264318.3|GABRA4|ENSG00000109158.6|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v2_chr2_-_166060552_166060566	0.00229871	HOXD4	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr12_-_112279694_112279710	0.00227278	HOXD4	ENST00000443596.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1 	ENST00000442119.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1
hg19_v2_chr4_-_69111401_69111438	0.00224423	HOXD4	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr14_+_62164340_62164443	0.00185524	HOXD4	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr6_+_72926145_72926245	0.00177886	HOXD4	ENST00000425662.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000453976.2|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr5_+_31193847_31193887	0.00168452	HOXD4	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr1_+_22138758_22138856	0.0016287	HOXD4	ENST00000344642.2|LDLRAD2|ENSG00000187942.7|low density lipoprotein receptor class A domain containing 2 	ENST00000543870.1|LDLRAD2|ENSG00000187942.7|low density lipoprotein receptor class A domain containing 2
hg19_v2_chr4_+_88532028_88532028	0.00145199	HOXD4	ENST00000282478.7|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr11_+_12766583_12766592	0.000598084	HOXD4	ENST00000361985.2|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr7_+_101460882_101460923	0.000558768	HOXD4	ENST00000292535.7|CUX1|ENSG00000257923.5|cut-like homeobox 1 	ENST00000549414.2|CUX1|ENSG00000257923.5|cut-like homeobox 1 	ENST00000550008.2|CUX1|ENSG00000257923.5|cut-like homeobox 1 	ENST00000546411.2|CUX1|ENSG00000257923.5|cut-like homeobox 1 	ENST00000556210.1|CUX1|ENSG00000257923.5|cut-like homeobox 1
hg19_v2_chr2_-_31361543_31361592	0.00042942	HOXD4	ENST00000349752.5|GALNT14|ENSG00000158089.10|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
hg19_v2_chr6_-_76072719_76072770	0.000367364	HOXD4	ENST00000370020.1|FILIP1|ENSG00000118407.10|filamin A interacting protein 1
hg19_v2_chr1_+_203444887_203444975	0.000317632	HOXD4	ENST00000343110.2|PRELP|ENSG00000188783.5|proline/arginine-rich end leucine-rich repeat protein
hg19_v2_chr5_-_160279207_160279247	0.000196728	HOXD4	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr3_-_196987309_196987350	8.02086e-05	HOXD4	ENST00000453607.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
