hg19_v2_chr6_+_71104588_71104593	1.18156	HOXC9	ENST00000418403.1|RP11-462G2.1|ENSG00000237643.1|RP11-462G2.1
hg19_v2_chr12_+_25348186_25348222	1.01109	HOXC9	ENST00000555711.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556885.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000554266.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556351.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556927.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000556402.1|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000553788.1|LYRM5|ENSG00000205707.6|LYR motif containing 5
hg19_v2_chr18_+_44812072_44812096	0.983954	HOXC9	ENST00000598649.1|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1	ENST00000586905.2|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1
hg19_v2_chr9_-_95055923_95055951	0.828309	HOXC9	ENST00000430417.1|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr6_-_52859046_52859201	0.777366	HOXC9	ENST00000457564.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000541324.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4 	ENST00000370960.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr6_-_26189304_26189346	0.752639	HOXC9	ENST00000340756.2|HIST1H4D|ENSG00000188987.2|histone cluster 1, H4d
hg19_v2_chr17_+_58018269_58018269	0.744166	HOXC9	ENST00000591035.1|RP11-178C3.1|ENSG00000267318.1|Uncharacterized protein
hg19_v2_chr12_+_25348139_25348162	0.678956	HOXC9	ENST00000557540.2|LYRM5|ENSG00000205707.6|LYR motif containing 5 	ENST00000381356.4|LYRM5|ENSG00000205707.6|LYR motif containing 5
hg19_v2_chr12_+_104235229_104235229	0.657675	HOXC9	ENST00000551650.1|RP11-650K20.3|ENSG00000257327.1|Uncharacterized protein
hg19_v2_chr22_+_22676808_22676828	0.642295	HOXC9	ENST00000390290.2|IGLV1-51|ENSG00000211644.2|immunoglobulin lambda variable 1-51
hg19_v2_chr6_-_52859968_52860149	0.576422	HOXC9	ENST00000370959.1|GSTA4|ENSG00000170899.6|glutathione S-transferase alpha 4
hg19_v2_chr17_+_67498396_67498409	0.563414	HOXC9	ENST00000588110.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr16_-_66907139_66907169	0.548507	HOXC9	ENST00000561579.2|NAE1|ENSG00000159593.10|NEDD8 activating enzyme E1 subunit 1
hg19_v2_chr5_-_42811986_42812001	0.51535	HOXC9	ENST00000511224.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000507920.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1 	ENST00000510965.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr12_-_104234966_104234984	0.505134	HOXC9	ENST00000392876.3|NT5DC3|ENSG00000111696.7|5'-nucleotidase domain containing 3
hg19_v2_chr9_-_15472730_15472753	0.489527	HOXC9	ENST00000481862.1|PSIP1|ENSG00000164985.10|PC4 and SFRS1 interacting protein 1
hg19_v2_chrX_+_150565038_150565070	0.482285	HOXC9	ENST00000370361.1|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr12_+_25205155_25205214	0.479802	HOXC9	ENST00000550945.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr1_-_197115818_197115829	0.476696	HOXC9	ENST00000367409.4|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 	ENST00000294732.7|ASPM|ENSG00000066279.12|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)
hg19_v2_chr11_-_26593779_26593795	0.476385	HOXC9	ENST00000529533.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr14_+_39944025_39944139	0.470348	HOXC9	ENST00000554328.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000556620.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1	ENST00000557197.1|RP11-111A21.1|ENSG00000258526.1|RP11-111A21.1
hg19_v2_chr5_-_42812143_42812181	0.454778	HOXC9	ENST00000514985.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr8_-_81083890_81083901	0.452021	HOXC9	ENST00000518937.1|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr12_+_25205446_25205566	0.445517	HOXC9	ENST00000557489.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein 	ENST00000354454.3|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein 	ENST00000536173.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr11_-_14521349_14521365	0.438528	HOXC9	ENST00000534234.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr4_-_70626430_70626434	0.418063	HOXC9	ENST00000310613.3|SULT1B1|ENSG00000173597.4|sulfotransferase family, cytosolic, 1B, member 1
hg19_v2_chr2_+_160590469_160590485	0.412223	HOXC9	ENST00000409591.1|MARCH7|ENSG00000136536.10|membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase
hg19_v2_chr16_+_67552303_67552342	0.411598	HOXC9	ENST00000562116.1|FAM65A|ENSG00000039523.13|family with sequence similarity 65, member A
hg19_v2_chr12_+_25205568_25205599	0.402543	HOXC9	ENST00000548766.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein 	ENST00000556887.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr9_-_75488984_75489052	0.400605	HOXC9	ENST00000423171.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000449235.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1	ENST00000453787.1|RP11-151D14.1|ENSG00000236849.1|RP11-151D14.1
hg19_v2_chr8_-_17555164_17555204	0.399775	HOXC9	ENST00000297488.6|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr22_+_45714361_45714374	0.393178	HOXC9	ENST00000452238.1|FAM118A|ENSG00000100376.7|family with sequence similarity 118, member A
hg19_v2_chr1_+_63989004_63989077	0.379297	HOXC9	ENST00000371088.4|EFCAB7|ENSG00000203965.8|EF-hand calcium binding domain 7
hg19_v2_chr1_+_152784447_152784447	0.377921	HOXC9	ENST00000360090.3|LCE1B|ENSG00000196734.6|late cornified envelope 1B
hg19_v2_chr6_-_121655850_121655891	0.370791	HOXC9	ENST00000422369.1|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr16_-_66764119_66764138	0.368725	HOXC9	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr19_+_21264943_21264965	0.36754	HOXC9	ENST00000597424.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr11_-_111649074_111649123	0.365911	HOXC9	ENST00000534218.1|RP11-108O10.2|ENSG00000254990.1|RP11-108O10.2
hg19_v2_chr3_-_170587815_170587826	0.361403	HOXC9	ENST00000466674.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr8_-_93978309_93978331	0.360562	HOXC9	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr10_-_96829246_96829259	0.359374	HOXC9	ENST00000371270.3|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000535898.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000539050.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8
hg19_v2_chr19_+_21106081_21106207	0.355077	HOXC9	ENST00000300540.3|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000595854.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000601284.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000328178.8|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000599885.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000596476.1|ZNF85|ENSG00000105750.10|zinc finger protein 85 	ENST00000345030.6|ZNF85|ENSG00000105750.10|zinc finger protein 85
hg19_v2_chr3_-_170587974_170587993	0.353937	HOXC9	ENST00000463836.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr7_+_138915102_138915102	0.353753	HOXC9	ENST00000486663.1|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr1_+_32379174_32379174	0.331836	HOXC9	ENST00000391369.1|AL136115.1|ENSG00000212673.1|HCG2032337; PRO1848; Uncharacterized protein
hg19_v2_chr13_+_108921977_108922082	0.322352	HOXC9	ENST00000430559.1|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b 	ENST00000375887.4|TNFSF13B|ENSG00000102524.7|tumor necrosis factor (ligand) superfamily, member 13b
hg19_v2_chr3_+_87276407_87276493	0.321712	HOXC9	ENST00000471660.1|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B 	ENST00000263780.4|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B 	ENST00000494980.1|CHMP2B|ENSG00000083937.4|charged multivesicular body protein 2B
hg19_v2_chr8_+_104033296_104033360	0.320796	HOXC9	ENST00000521514.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 	ENST00000518738.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
hg19_v2_chr17_+_61151306_61151320	0.320461	HOXC9	ENST00000580068.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000580466.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr2_-_17981462_17981584	0.317399	HOXC9	ENST00000402989.1|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6 	ENST00000428868.1|SMC6|ENSG00000163029.11|structural maintenance of chromosomes 6
hg19_v2_chr8_-_17579726_17579759	0.311588	HOXC9	ENST00000381861.3|MTUS1|ENSG00000129422.9|microtubule associated tumor suppressor 1
hg19_v2_chr8_-_71157595_71157616	0.308765	HOXC9	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr4_+_71600063_71600134	0.308469	HOXC9	ENST00000513597.1|RUFY3|ENSG00000018189.8|RUN and FYVE domain containing 3
hg19_v2_chr1_-_113615699_113615730	0.304875	HOXC9	ENST00000421157.1|RP11-31F15.2|ENSG00000238198.1|RP11-31F15.2
hg19_v2_chrX_+_13671225_13671327	0.304358	HOXC9	ENST00000545566.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000544987.1|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing 	ENST00000314720.4|TCEANC|ENSG00000176896.7|transcription elongation factor A (SII) N-terminal and central domain containing
hg19_v2_chr6_-_109702885_109702908	0.297903	HOXC9	ENST00000504373.1|CD164|ENSG00000135535.10|CD164 molecule, sialomucin
hg19_v2_chr2_-_160568529_160568563	0.290837	HOXC9	ENST00000418770.1|AC009961.3|ENSG00000226266.2|AC009961.3
hg19_v2_chr3_-_170588163_170588272	0.290158	HOXC9	ENST00000295830.8|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr2_+_109204909_109204928	0.290023	HOXC9	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr2_+_162016827_162016876	0.286832	HOXC9	ENST00000429217.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000406287.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000402568.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr3_+_56591184_56591255	0.286667	HOXC9	ENST00000422222.1|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66 	ENST00000394672.3|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66 	ENST00000326595.7|CCDC66|ENSG00000180376.12|coiled-coil domain containing 66
hg19_v2_chr14_+_60712463_60712475	0.283252	HOXC9	ENST00000325642.3|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A 	ENST00000529574.1|PPM1A|ENSG00000100614.13|protein phosphatase, Mg2+/Mn2+ dependent, 1A
hg19_v2_chr20_+_5987890_5987904	0.27709	HOXC9	ENST00000378868.4|CRLS1|ENSG00000088766.7|cardiolipin synthase 1
hg19_v2_chr10_+_98592009_98592061	0.272712	HOXC9	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chrX_+_105937068_105937091	0.268638	HOXC9	ENST00000324342.3|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr19_+_21264980_21265026	0.266233	HOXC9	ENST00000596053.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000597086.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596143.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000596367.1|ZNF714|ENSG00000160352.11|zinc finger protein 714 	ENST00000601416.1|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr1_-_204183071_204183220	0.265691	HOXC9	ENST00000308302.3|GOLT1A|ENSG00000174567.7|golgi transport 1A
hg19_v2_chr7_+_130126165_130126202	0.262866	HOXC9	ENST00000427521.1|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000416162.2|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000378576.4|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr8_+_92114060_92114060	0.262593	HOXC9	ENST00000518304.1|LRRC69|ENSG00000214954.4|leucine rich repeat containing 69
hg19_v2_chrX_+_123097014_123097033	0.258901	HOXC9	ENST00000394478.1|STAG2|ENSG00000101972.14|stromal antigen 2
hg19_v2_chr5_-_139930713_139930713	0.257385	HOXC9	ENST00000602657.1|SRA1|ENSG00000213523.5|steroid receptor RNA activator 1
hg19_v2_chr12_+_19358228_19358259	0.253997	HOXC9	ENST00000424268.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000543806.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr14_+_57671888_57671888	0.249028	HOXC9	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr17_+_48823975_48824003	0.248811	HOXC9	ENST00000513969.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae) 	ENST00000503728.1|LUC7L3|ENSG00000108848.11|LUC7-like 3 (S. cerevisiae)
hg19_v2_chr7_+_64838712_64838778	0.247079	HOXC9	ENST00000328747.7|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000431504.1|ZNF92|ENSG00000146757.9|zinc finger protein 92 	ENST00000357512.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr8_-_82608409_82608409	0.24529	HOXC9	ENST00000518568.1|SLC10A5|ENSG00000253598.1|solute carrier family 10, member 5
hg19_v2_chr16_+_58074069_58074069	0.244949	HOXC9	ENST00000570065.1|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr11_+_65266507_65266522	0.243682	HOXC9	ENST00000544868.1|MALAT1|ENSG00000251562.3|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
hg19_v2_chr10_+_5238793_5238807	0.241819	HOXC9	ENST00000263126.1|AKR1C4|ENSG00000198610.6|aldo-keto reductase family 1, member C4
hg19_v2_chr2_-_109605663_109605828	0.240244	HOXC9	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr3_+_143690640_143690675	0.238752	HOXC9	ENST00000315691.3|C3orf58|ENSG00000181744.4|chromosome 3 open reading frame 58
hg19_v2_chr19_-_23869999_23870022	0.235815	HOXC9	ENST00000601935.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000359788.4|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000600313.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000596211.1|ZNF675|ENSG00000197372.5|zinc finger protein 675 	ENST00000599168.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr7_+_7196565_7196714	0.232492	HOXC9	ENST00000429911.1|C1GALT1|ENSG00000106392.6|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
hg19_v2_chr8_-_42396185_42396197	0.229557	HOXC9	ENST00000518717.1|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr7_+_64838786_64838809	0.228207	HOXC9	ENST00000450302.2|ZNF92|ENSG00000146757.9|zinc finger protein 92
hg19_v2_chr8_+_104033277_104033292	0.225397	HOXC9	ENST00000518857.1|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 	ENST00000395862.3|ATP6V1C1|ENSG00000155097.7|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
hg19_v2_chr8_-_93978216_93978292	0.218821	HOXC9	ENST00000517751.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000524107.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr11_-_26593677_26593708	0.218105	HOXC9	ENST00000527569.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr6_-_111804905_111804921	0.213597	HOXC9	ENST00000358835.3|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit 	ENST00000435970.1|REV3L|ENSG00000009413.11|REV3-like, polymerase (DNA directed), zeta, catalytic subunit
hg19_v2_chr1_+_233086326_233086415	0.210889	HOXC9	ENST00000366628.5|NTPCR|ENSG00000135778.7|nucleoside-triphosphatase, cancer-related 	ENST00000366627.4|NTPCR|ENSG00000135778.7|nucleoside-triphosphatase, cancer-related
hg19_v2_chr2_-_134326009_134326053	0.209944	HOXC9	ENST00000409261.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5 	ENST00000409213.1|NCKAP5|ENSG00000176771.11|NCK-associated protein 5
hg19_v2_chr2_+_161993465_161993481	0.209517	HOXC9	ENST00000457476.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr2_-_8723918_8723957	0.209353	HOXC9	ENST00000454224.1|AC011747.4|ENSG00000236008.1|AC011747.4
hg19_v2_chr8_-_80993010_80993073	0.206268	HOXC9	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr13_-_30424821_30424847	0.204606	HOXC9	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr8_-_93978333_93978345	0.200563	HOXC9	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr11_+_19798964_19799013	0.200134	HOXC9	ENST00000527559.2|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr18_+_32558380_32558399	0.199626	HOXC9	ENST00000588349.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr18_+_20378191_20378224	0.198112	HOXC9	ENST00000583700.1|RBBP8|ENSG00000101773.12|retinoblastoma binding protein 8
hg19_v2_chr2_+_38177575_38177612	0.197846	HOXC9	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr14_+_55494323_55494345	0.197836	HOXC9	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr5_-_111093167_111093252	0.197293	HOXC9	ENST00000446294.2|NREP|ENSG00000134986.9|neuronal regeneration related protein 	ENST00000419114.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr12_-_63328817_63328870	0.196175	HOXC9	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr18_-_32870148_32870223	0.194387	HOXC9	ENST00000589178.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000586922.2|RP11-158H5.7|ENSG00000268573.1|RP11-158H5.7	ENST00000333206.5|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000592278.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000592211.1|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000420878.3|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30 	ENST00000383091.2|ZSCAN30|ENSG00000186814.8|zinc finger and SCAN domain containing 30
hg19_v2_chr16_-_48281305_48281419	0.19363	HOXC9	ENST00000356608.2|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr12_-_110906027_110906089	0.192928	HOXC9	ENST00000537466.2|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000550974.1|GPN3|ENSG00000111231.4|GPN-loop GTPase 3 	ENST00000228827.3|GPN3|ENSG00000111231.4|GPN-loop GTPase 3
hg19_v2_chr15_+_45003675_45003724	0.190791	HOXC9	ENST00000558401.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000559916.1|B2M|ENSG00000166710.13|beta-2-microglobulin 	ENST00000544417.1|B2M|ENSG00000166710.13|beta-2-microglobulin
hg19_v2_chr3_+_69812701_69812729	0.190292	HOXC9	ENST00000472437.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr2_+_172309634_172309643	0.189883	HOXC9	ENST00000339506.3|DCAF17|ENSG00000115827.9|DDB1 and CUL4 associated factor 17
hg19_v2_chr4_-_103749105_103749177	0.188828	HOXC9	ENST00000394801.4|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000394804.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr10_-_113943447_113943536	0.18817	HOXC9	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr15_+_40987327_40987397	0.185878	HOXC9	ENST00000423169.2|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000267868.3|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000557850.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000532743.1|RAD51|ENSG00000051180.12|RAD51 recombinase 	ENST00000382643.3|RAD51|ENSG00000051180.12|RAD51 recombinase
hg19_v2_chr4_-_100065440_100065463	0.185868	HOXC9	ENST00000508393.1|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide 	ENST00000265512.7|ADH4|ENSG00000198099.4|alcohol dehydrogenase 4 (class II), pi polypeptide
hg19_v2_chr19_+_9296279_9296279	0.183719	HOXC9	ENST00000344248.2|OR7D2|ENSG00000188000.2|olfactory receptor, family 7, subfamily D, member 2
hg19_v2_chr8_-_18711866_18711911	0.182762	HOXC9	ENST00000519851.1|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr5_+_136070614_136070625	0.18004	HOXC9	ENST00000502421.1|CTB-1I21.1|ENSG00000250284.1|CTB-1I21.1
hg19_v2_chr4_+_86525299_86525314	0.177288	HOXC9	ENST00000512201.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr4_+_106631966_106632003	0.177138	HOXC9	ENST00000360505.5|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000510865.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing 	ENST00000509336.1|GSTCD|ENSG00000138780.10|glutathione S-transferase, C-terminal domain containing
hg19_v2_chr16_+_53412368_53412387	0.175529	HOXC9	ENST00000565189.1|RP11-44F14.2|ENSG00000261804.1|RP11-44F14.2
hg19_v2_chr8_-_81083731_81083813	0.172429	HOXC9	ENST00000379096.5|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chr8_+_52730143_52730143	0.171162	HOXC9	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr2_+_196440692_196440709	0.170137	HOXC9	ENST00000458054.1|SLC39A10|ENSG00000196950.9|solute carrier family 39 (zinc transporter), member 10
hg19_v2_chr8_-_93978357_93978379	0.16988	HOXC9	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr14_+_31046959_31046972	0.168824	HOXC9	ENST00000547532.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase 	ENST00000555429.1|G2E3|ENSG00000092140.10|G2/M-phase specific E3 ubiquitin protein ligase
hg19_v2_chr13_-_36050819_36050834	0.166058	HOXC9	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr3_-_47023455_47023498	0.164974	HOXC9	ENST00000446836.1|CCDC12|ENSG00000160799.7|coiled-coil domain containing 12 	ENST00000425441.1|CCDC12|ENSG00000160799.7|coiled-coil domain containing 12
hg19_v2_chr11_+_114310164_114310236	0.164243	HOXC9	ENST00000544196.1|REXO2|ENSG00000076043.5|RNA exonuclease 2 	ENST00000539754.1|REXO2|ENSG00000076043.5|RNA exonuclease 2 	ENST00000539275.1|REXO2|ENSG00000076043.5|RNA exonuclease 2
hg19_v2_chr9_+_2029019_2029164	0.163824	HOXC9	ENST00000382194.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr2_+_210443993_210444094	0.163066	HOXC9	ENST00000392193.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr2_+_210444298_210444343	0.160219	HOXC9	ENST00000445941.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr3_-_25824872_25824913	0.16019	HOXC9	ENST00000308710.5|NGLY1|ENSG00000151092.12|N-glycanase 1
hg19_v2_chr1_-_147599549_147599549	0.159508	HOXC9	ENST00000369228.5|NBPF24|ENSG00000203836.7|neuroblastoma breakpoint family, member 24
hg19_v2_chr3_+_113251143_113251263	0.156739	HOXC9	ENST00000264852.4|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1 	ENST00000393830.3|SIDT1|ENSG00000072858.6|SID1 transmembrane family, member 1
hg19_v2_chr2_+_109271481_109271509	0.156122	HOXC9	ENST00000542845.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1 	ENST00000393314.2|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr19_-_20748541_20748568	0.155818	HOXC9	ENST00000427401.4|ZNF737|ENSG00000237440.4|zinc finger protein 737 	ENST00000594419.1|ZNF737|ENSG00000237440.4|zinc finger protein 737
hg19_v2_chr12_-_15815626_15815681	0.154556	HOXC9	ENST00000540613.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr16_-_56485257_56485287	0.153399	HOXC9	ENST00000300291.5|NUDT21|ENSG00000167005.9|nudix (nucleoside diphosphate linked moiety X)-type motif 21
hg19_v2_chrX_+_105936982_105937024	0.153255	HOXC9	ENST00000418562.1|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chrX_+_41193407_41193422	0.151962	HOXC9	ENST00000457138.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 	ENST00000441189.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr2_+_219472488_219472534	0.151855	HOXC9	ENST00000450993.2|PLCD4|ENSG00000115556.9|phospholipase C, delta 4
hg19_v2_chr10_-_128110441_128110456	0.149012	HOXC9	ENST00000456514.1|LINC00601|ENSG00000235180.1|long intergenic non-protein coding RNA 601
hg19_v2_chr6_-_146057144_146057164	0.148416	HOXC9	ENST00000367519.3|EPM2A|ENSG00000112425.9|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
hg19_v2_chr7_+_130126012_130126069	0.148293	HOXC9	ENST00000341441.5|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr22_-_24126145_24126145	0.147452	HOXC9	ENST00000598975.1|AP000349.1|ENSG00000267954.1|Uncharacterized protein
hg19_v2_chr3_+_41241596_41241612	0.143749	HOXC9	ENST00000450969.1|CTNNB1|ENSG00000168036.12|catenin (cadherin-associated protein), beta 1, 88kDa
hg19_v2_chr19_+_21265028_21265056	0.142851	HOXC9	ENST00000291770.7|ZNF714|ENSG00000160352.11|zinc finger protein 714
hg19_v2_chr12_+_19358192_19358212	0.142603	HOXC9	ENST00000538305.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr1_-_212965104_212965141	0.141951	HOXC9	ENST00000422588.2|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366975.6|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366977.3|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component 	ENST00000366976.1|NSL1|ENSG00000117697.10|NSL1, MIS12 kinetochore complex component
hg19_v2_chr11_-_104972158_104972190	0.14149	HOXC9	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr16_+_71560023_71560052	0.140649	HOXC9	ENST00000572450.1|CHST4|ENSG00000140835.8|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
hg19_v2_chr18_-_74839891_74839921	0.140363	HOXC9	ENST00000581878.1|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr2_+_128458514_128458597	0.14003	HOXC9	ENST00000310981.4|SFT2D3|ENSG00000173349.4|SFT2 domain containing 3
hg19_v2_chr2_-_200320768_200320811	0.139951	HOXC9	ENST00000428695.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr17_+_44803922_44803922	0.139835	HOXC9	ENST00000465370.1|NSF|ENSG00000073969.14|N-ethylmaleimide-sensitive factor
hg19_v2_chr2_+_162016916_162016954	0.139156	HOXC9	ENST00000405852.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr9_+_80912059_80912081	0.13729	HOXC9	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr9_-_98189055_98189078	0.137085	HOXC9	ENST00000433644.2|RP11-435O5.2|ENSG00000237857.2|RP11-435O5.2
hg19_v2_chr12_+_25205628_25205657	0.136433	HOXC9	ENST00000554942.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chrX_-_13835147_13835224	0.136358	HOXC9	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chrX_-_13321511_13321571	0.13578	HOXC9	ENST00000412485.1|GS1-600G8.5|ENSG00000235385.1|GS1-600G8.5	ENST00000443965.1|GS1-600G8.5|ENSG00000235385.1|GS1-600G8.5
hg19_v2_chr5_+_169011033_169011108	0.134757	HOXC9	ENST00000513795.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr10_+_76871353_76871394	0.133037	HOXC9	ENST00000542569.1|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr3_+_69811858_69811881	0.130735	HOXC9	ENST00000433517.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr5_-_159846066_159846095	0.130714	HOXC9	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr3_+_112709804_112709850	0.129671	HOXC9	ENST00000383677.3|GTPBP8|ENSG00000163607.10|GTP-binding protein 8 (putative)
hg19_v2_chr20_-_36152914_36152953	0.126783	HOXC9	ENST00000397131.1|BLCAP|ENSG00000166619.8|bladder cancer associated protein
hg19_v2_chr12_-_8803128_8803164	0.126177	HOXC9	ENST00000543467.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr22_+_21133469_21133469	0.12519	HOXC9	ENST00000406799.1|SERPIND1|ENSG00000099937.6|serpin peptidase inhibitor, clade D (heparin cofactor), member 1
hg19_v2_chr2_-_86850949_86851023	0.125049	HOXC9	ENST00000237455.4|RNF103|ENSG00000239305.2|ring finger protein 103
hg19_v2_chr18_+_29027696_29027774	0.123563	HOXC9	ENST00000257189.4|DSG3|ENSG00000134757.4|desmoglein 3
hg19_v2_chr2_+_187371440_187371567	0.12324	HOXC9	ENST00000445547.1|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr1_+_87012922_87012932	0.123165	HOXC9	ENST00000263723.5|CLCA4|ENSG00000016602.8|chloride channel accessory 4
hg19_v2_chr13_+_49551020_49551097	0.121982	HOXC9	ENST00000541916.1|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr5_-_145562147_145562240	0.121505	HOXC9	ENST00000545646.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000274562.9|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000510191.1|LARS|ENSG00000133706.13|leucyl-tRNA synthetase 	ENST00000394434.2|LARS|ENSG00000133706.13|leucyl-tRNA synthetase
hg19_v2_chr10_-_13344341_13344412	0.121471	HOXC9	ENST00000396920.3|PHYH|ENSG00000107537.9|phytanoyl-CoA 2-hydroxylase
hg19_v2_chr1_-_157069590_157069607	0.121197	HOXC9	ENST00000454449.2|ETV3L|ENSG00000253831.1|ets variant 3-like
hg19_v2_chr8_-_116504448_116504481	0.117036	HOXC9	ENST00000518018.1|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr1_+_150039877_150039923	0.116191	HOXC9	ENST00000419023.1|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v2_chr16_+_68119764_68119868	0.115729	HOXC9	ENST00000570212.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 	ENST00000562926.1|NFATC3|ENSG00000072736.14|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3
hg19_v2_chr6_+_111303218_111303301	0.115466	HOXC9	ENST00000441448.2|RPF2|ENSG00000197498.8|ribosome production factor 2 homolog (S. cerevisiae)
hg19_v2_chr7_+_102937869_102937909	0.115066	HOXC9	ENST00000249269.4|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000428154.1|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta 	ENST00000420236.2|PMPCB|ENSG00000105819.9|peptidase (mitochondrial processing) beta
hg19_v2_chr2_+_207630081_207630347	0.114468	HOXC9	ENST00000236980.6|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000418289.1|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000402774.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2 	ENST00000403094.3|FASTKD2|ENSG00000118246.9|FAST kinase domains 2
hg19_v2_chr2_+_109237717_109237729	0.113561	HOXC9	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr3_+_111630451_111630470	0.112749	HOXC9	ENST00000495180.1|PHLDB2|ENSG00000144824.15|pleckstrin homology-like domain, family B, member 2
hg19_v2_chr8_-_93978346_93978355	0.112379	HOXC9	ENST00000523580.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr7_+_93690435_93690467	0.112021	HOXC9	ENST00000438538.1|AC003092.1|ENSG00000236453.1|AC003092.1
hg19_v2_chr8_+_132916318_132916401	0.111632	HOXC9	ENST00000254624.5|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae) 	ENST00000522709.1|EFR3A|ENSG00000132294.9|EFR3 homolog A (S. cerevisiae)
hg19_v2_chr2_+_158114051_158114110	0.111008	HOXC9	ENST00000259056.4|GALNT5|ENSG00000136542.4|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
hg19_v2_chr17_-_28257080_28257294	0.110954	HOXC9	ENST00000579954.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000540801.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000269033.3|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000590153.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2 	ENST00000582084.1|SSH2|ENSG00000141298.13|slingshot protein phosphatase 2
hg19_v2_chr10_+_115614370_115614436	0.108583	HOXC9	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chrX_-_131353461_131353485	0.107905	HOXC9	ENST00000370874.1|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr22_-_32766972_32766996	0.107332	HOXC9	ENST00000382084.4|RFPL3S|ENSG00000205853.6|RFPL3 antisense 	ENST00000382086.2|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr17_-_42767092_42767103	0.107325	HOXC9	ENST00000588687.1|CCDC43|ENSG00000180329.9|coiled-coil domain containing 43
hg19_v2_chr8_-_101718991_101719023	0.107321	HOXC9	ENST00000517990.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr4_-_103748880_103749047	0.104404	HOXC9	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr9_-_20382446_20382493	0.103799	HOXC9	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr1_+_163039143_163039159	0.102227	HOXC9	ENST00000531057.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000527809.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000367908.4|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4
hg19_v2_chr17_+_76494911_76494911	0.101412	HOXC9	ENST00000598378.1|DNAH17-AS1|ENSG00000268470.1|DNAH17 antisense RNA 1
hg19_v2_chrX_+_120181457_120181474	0.101217	HOXC9	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr2_-_122262593_122262669	0.101194	HOXC9	ENST00000418989.1|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr17_+_29664830_29664844	0.100532	HOXC9	ENST00000444181.2|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000417592.2|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr14_-_92247032_92247051	0.0999366	HOXC9	ENST00000556661.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta 	ENST00000553676.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta 	ENST00000554560.1|CATSPERB|ENSG00000133962.3|catsper channel auxiliary subunit beta
hg19_v2_chr2_+_202047843_202047918	0.0990283	HOXC9	ENST00000272879.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000374650.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000346817.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000313728.7|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000448480.1|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr1_+_12524965_12525019	0.0977637	HOXC9	ENST00000471923.1|VPS13D|ENSG00000048707.9|vacuolar protein sorting 13 homolog D (S. cerevisiae)
hg19_v2_chr8_+_9009202_9009252	0.0973262	HOXC9	ENST00000518496.1|RP11-10A14.4|ENSG00000253426.1|Uncharacterized protein
hg19_v2_chr18_+_32558208_32558340	0.0968308	HOXC9	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr3_+_16306691_16306752	0.0967155	HOXC9	ENST00000285083.5|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1 	ENST00000605932.1|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1 	ENST00000435829.2|OXNAD1|ENSG00000154814.9|oxidoreductase NAD-binding domain containing 1
hg19_v2_chr1_+_202385953_202385994	0.0966958	HOXC9	ENST00000466968.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr7_-_111424506_111424539	0.0957604	HOXC9	ENST00000450156.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000494651.2|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr11_+_114310102_114310118	0.0947429	HOXC9	ENST00000265881.5|REXO2|ENSG00000076043.5|RNA exonuclease 2
hg19_v2_chrX_-_135338503_135338641	0.0939528	HOXC9	ENST00000370663.5|MAP7D3|ENSG00000129680.11|MAP7 domain containing 3
hg19_v2_chr11_-_107729887_107729927	0.0926691	HOXC9	ENST00000525815.1|SLC35F2|ENSG00000110660.10|solute carrier family 35, member F2
hg19_v2_chr4_-_69536346_69536371	0.0926131	HOXC9	ENST00000338206.5|UGT2B15|ENSG00000196620.4|UDP glucuronosyltransferase 2 family, polypeptide B15
hg19_v2_chr13_-_24007815_24007872	0.0893555	HOXC9	ENST00000382298.3|SACS|ENSG00000151835.9|spastic ataxia of Charlevoix-Saguenay (sacsin)
hg19_v2_chr4_-_52883786_52883786	0.0890535	HOXC9	ENST00000343457.3|LRRC66|ENSG00000188993.3|leucine rich repeat containing 66
hg19_v2_chrX_+_150565653_150565694	0.0876386	HOXC9	ENST00000330374.6|VMA21|ENSG00000160131.9|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
hg19_v2_chr12_-_27167233_27167367	0.0865403	HOXC9	ENST00000535819.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543803.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000535423.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000539741.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000343028.4|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000545600.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3 	ENST00000543088.1|TM7SF3|ENSG00000064115.6|transmembrane 7 superfamily member 3
hg19_v2_chr1_+_160370344_160370406	0.0863892	HOXC9	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr2_+_86669118_86669241	0.0863143	HOXC9	ENST00000427678.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A 	ENST00000542128.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chr8_-_62602327_62602408	0.085012	HOXC9	ENST00000445642.3|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517847.2|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000389204.4|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517661.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000517903.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522603.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522349.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000522835.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000541428.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase 	ENST00000518306.1|ASPH|ENSG00000198363.11|aspartate beta-hydroxylase
hg19_v2_chr4_-_103749313_103749331	0.0849859	HOXC9	ENST00000394803.5|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr3_-_151034734_151034745	0.0843608	HOXC9	ENST00000260843.4|GPR87|ENSG00000138271.4|G protein-coupled receptor 87
hg19_v2_chr4_+_56815102_56815147	0.0842316	HOXC9	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr1_+_212965170_212965274	0.0837975	HOXC9	ENST00000532324.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000366974.4|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000530441.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000526641.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000531963.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000366973.4|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000526997.1|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3 	ENST00000488246.2|TATDN3|ENSG00000203705.6|TatD DNase domain containing 3
hg19_v2_chr16_+_71560154_71560170	0.0817919	HOXC9	ENST00000539698.3|CHST4|ENSG00000140835.8|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
hg19_v2_chr1_+_178694300_178694346	0.0815704	HOXC9	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr11_+_125496124_125496344	0.0813592	HOXC9	ENST00000533778.2|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000534070.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr2_+_161993412_161993453	0.0807367	HOXC9	ENST00000259075.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000432002.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr7_-_156685841_156685884	0.0800969	HOXC9	ENST00000354505.4|LMBR1|ENSG00000105983.15|limb development membrane protein 1 	ENST00000540390.1|LMBR1|ENSG00000105983.15|limb development membrane protein 1
hg19_v2_chr10_-_94257512_94257524	0.0799556	HOXC9	ENST00000371581.5|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr10_+_78078088_78078092	0.0798763	HOXC9	ENST00000496424.2|C10orf11|ENSG00000148655.10|chromosome 10 open reading frame 11
hg19_v2_chr5_+_135468516_135468621	0.0789193	HOXC9	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr20_-_23860373_23860397	0.0786845	HOXC9	ENST00000304710.4|CST5|ENSG00000170367.4|cystatin D
hg19_v2_chr4_-_69111401_69111438	0.0782549	HOXC9	ENST00000332644.5|TMPRSS11B|ENSG00000185873.7|transmembrane protease, serine 11B
hg19_v2_chr12_+_123237321_123237407	0.0771318	HOXC9	ENST00000280557.6|DENR|ENSG00000139726.6|density-regulated protein 	ENST00000455982.2|DENR|ENSG00000139726.6|density-regulated protein
hg19_v2_chr1_+_35734562_35734573	0.075541	HOXC9	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr8_-_30670384_30670394	0.0754151	HOXC9	ENST00000221138.4|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme 	ENST00000518243.1|PPP2CB|ENSG00000104695.8|protein phosphatase 2, catalytic subunit, beta isozyme
hg19_v2_chr1_+_81771806_81771876	0.0753415	HOXC9	ENST00000370721.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370727.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370725.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370723.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370728.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370730.1|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr4_-_184243561_184243579	0.0752702	HOXC9	ENST00000514470.1|CLDN24|ENSG00000185758.7|claudin 24 	ENST00000541814.1|CLDN24|ENSG00000185758.7|claudin 24
hg19_v2_chr9_-_95055956_95056004	0.0743523	HOXC9	ENST00000375629.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000447699.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000375643.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase 	ENST00000395554.3|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr10_-_115614127_115614176	0.0728619	HOXC9	ENST00000369305.1|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr11_+_125496619_125496646	0.0728153	HOXC9	ENST00000532669.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1 	ENST00000278916.3|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr11_-_60674000_60674029	0.0697019	HOXC9	ENST00000546152.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr2_-_111230393_111230393	0.0696237	HOXC9	ENST00000447537.2|LIMS3L|ENSG00000257207.4|LIM and senescent cell antigen-like-containing domain protein 3; Uncharacterized protein; cDNA FLJ59124, highly similar to Particularly interesting newCys-His protein; cDNA, FLJ79109, highly similar to Particularly interesting newCys-His protein  	ENST00000413601.2|LIMS3L|ENSG00000256671.5|LIM and senescent cell antigen-like domains 3-like
hg19_v2_chr1_+_192127578_192127613	0.0690073	HOXC9	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chrX_-_16887963_16888014	0.0670744	HOXC9	ENST00000380084.4|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr12_-_90049878_90049890	0.067036	HOXC9	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr2_+_28718921_28718986	0.0668808	HOXC9	ENST00000327757.5|PLB1|ENSG00000163803.8|phospholipase B1 	ENST00000422425.2|PLB1|ENSG00000163803.8|phospholipase B1 	ENST00000404858.1|PLB1|ENSG00000163803.8|phospholipase B1
hg19_v2_chr13_+_33160553_33160564	0.0662759	HOXC9	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr17_-_40288449_40288502	0.066223	HOXC9	ENST00000552162.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family 	ENST00000550504.1|RAB5C|ENSG00000108774.10|RAB5C, member RAS oncogene family
hg19_v2_chr1_-_173176452_173176477	0.0659466	HOXC9	ENST00000281834.3|TNFSF4|ENSG00000117586.6|tumor necrosis factor (ligand) superfamily, member 4
hg19_v2_chr12_-_25055177_25055258	0.0657833	HOXC9	ENST00000538118.1|BCAT1|ENSG00000060982.10|branched chain amino-acid transaminase 1, cytosolic
hg19_v2_chr13_-_52027134_52027343	0.0655547	HOXC9	ENST00000311234.4|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000425000.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000463928.1|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000442263.3|INTS6|ENSG00000102786.10|integrator complex subunit 6 	ENST00000398119.2|INTS6|ENSG00000102786.10|integrator complex subunit 6
hg19_v2_chr16_+_19619083_19619132	0.0642765	HOXC9	ENST00000538552.1|C16orf62|ENSG00000103544.10|chromosome 16 open reading frame 62
hg19_v2_chr2_-_169887827_169887839	0.0640181	HOXC9	ENST00000263817.6|ABCB11|ENSG00000073734.8|ATP-binding cassette, sub-family B (MDR/TAP), member 11
hg19_v2_chr9_-_95056010_95056038	0.0634088	HOXC9	ENST00000443024.2|IARS|ENSG00000196305.13|isoleucyl-tRNA synthetase
hg19_v2_chr2_-_231989808_231989832	0.0626687	HOXC9	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr6_+_76599809_76599927	0.0618666	HOXC9	ENST00000430435.1|MYO6|ENSG00000196586.9|myosin VI
hg19_v2_chr2_+_109204743_109204855	0.0610242	HOXC9	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr22_+_32149927_32150081	0.0600358	HOXC9	ENST00000437411.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000535622.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000536766.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400242.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000266091.3|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400249.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000400246.1|DEPDC5|ENSG00000100150.12|DEP domain containing 5 	ENST00000382105.2|DEPDC5|ENSG00000100150.12|DEP domain containing 5
hg19_v2_chr4_+_169633310_169633344	0.0588944	HOXC9	ENST00000510998.1|PALLD|ENSG00000129116.13|palladin, cytoskeletal associated protein
hg19_v2_chr12_+_32687221_32687267	0.0584213	HOXC9	ENST00000525053.1|FGD4|ENSG00000139132.10|FYVE, RhoGEF and PH domain containing 4
hg19_v2_chr18_-_44702668_44702747	0.0577602	HOXC9	ENST00000256433.3|IER3IP1|ENSG00000134049.3|immediate early response 3 interacting protein 1
hg19_v2_chr15_+_52155001_52155035	0.0567089	HOXC9	ENST00000544199.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr2_-_69664586_69664760	0.0553934	HOXC9	ENST00000303698.3|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000394305.1|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) 	ENST00000410022.2|NFU1|ENSG00000169599.8|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
hg19_v2_chr16_-_12897642_12897874	0.0535075	HOXC9	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr1_+_26798955_26799010	0.0534825	HOXC9	ENST00000361427.5|HMGN2|ENSG00000198830.6|high mobility group nucleosomal binding domain 2
hg19_v2_chr1_+_202789394_202789394	0.0529113	HOXC9	ENST00000330493.5|RP11-480I12.4|ENSG00000184774.6|Putative inactive alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein LOC641515
hg19_v2_chr12_-_31743901_31743956	0.0525873	HOXC9	ENST00000354285.4|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr1_-_212004090_212004168	0.0521741	HOXC9	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr6_+_28249332_28249391	0.0520942	HOXC9	ENST00000259883.3|PGBD1|ENSG00000137338.4|piggyBac transposable element derived 1
hg19_v2_chr13_+_24844857_24844930	0.0520793	HOXC9	ENST00000409126.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000343003.6|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr14_+_100240019_100240042	0.0516799	HOXC9	ENST00000556199.1|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr16_+_28505955_28506001	0.0515706	HOXC9	ENST00000564831.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000328423.5|APOBR|ENSG00000184730.6|apolipoprotein B receptor 	ENST00000431282.1|APOBR|ENSG00000184730.6|apolipoprotein B receptor
hg19_v2_chr17_-_34257771_34257786	0.0514961	HOXC9	ENST00000394529.3|RDM1|ENSG00000187456.9|RAD52 motif 1 	ENST00000293273.6|RDM1|ENSG00000187456.9|RAD52 motif 1
hg19_v2_chr18_+_34124507_34124520	0.0514863	HOXC9	ENST00000591635.1|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3
hg19_v2_chr7_+_35756400_35756412	0.0494076	HOXC9	ENST00000585952.1|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr16_+_66429358_66429432	0.049193	HOXC9	ENST00000539168.1|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr13_+_21714711_21714754	0.0490568	HOXC9	ENST00000607003.1|SAP18|ENSG00000150459.8|Sin3A-associated protein, 18kDa 	ENST00000492245.1|SAP18|ENSG00000150459.8|Sin3A-associated protein, 18kDa
hg19_v2_chr6_+_158733692_158733692	0.0480657	HOXC9	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr1_+_200993071_200993094	0.0475348	HOXC9	ENST00000446333.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1	ENST00000458003.1|RP11-168O16.1|ENSG00000229191.1|RP11-168O16.1
hg19_v2_chr7_+_80275621_80275648	0.0466242	HOXC9	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr12_-_90049828_90049847	0.0462982	HOXC9	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chrX_+_139791917_139791938	0.0456073	HOXC9	ENST00000607004.1|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632 	ENST00000370535.3|LINC00632|ENSG00000203930.6|long intergenic non-protein coding RNA 632
hg19_v2_chr10_+_127585093_127585114	0.0455989	HOXC9	ENST00000368695.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000368693.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1
hg19_v2_chr2_+_210444142_210444194	0.04426	HOXC9	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr11_+_125496400_125496464	0.0427594	HOXC9	ENST00000524737.1|CHEK1|ENSG00000149554.8|checkpoint kinase 1
hg19_v2_chr20_+_57414795_57414811	0.0426683	HOXC9	ENST00000371098.2|GNAS|ENSG00000087460.19|GNAS complex locus 	ENST00000371075.3|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr1_-_85100703_85100703	0.0423695	HOXC9	ENST00000370624.1|C1orf180|ENSG00000180869.3|chromosome 1 open reading frame 180
hg19_v2_chr6_+_166945369_166945369	0.0419331	HOXC9	ENST00000598601.1|Z98049.1|ENSG00000269048.1|CDNA FLJ25492 fis, clone CBR01389; Uncharacterized protein
hg19_v2_chr1_+_150039787_150039873	0.041761	HOXC9	ENST00000535106.1|VPS45|ENSG00000136631.8|vacuolar protein sorting 45 homolog (S. cerevisiae)
hg19_v2_chr8_-_72274095_72274116	0.0417577	HOXC9	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr11_-_26593649_26593670	0.0412244	HOXC9	ENST00000455601.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr2_-_224467093_224467221	0.0412138	HOXC9	ENST00000305409.2|SCG2|ENSG00000171951.4|secretogranin II
hg19_v2_chr18_-_12656715_12656735	0.0412119	HOXC9	ENST00000462226.1|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000497844.2|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000309836.5|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1 	ENST00000453447.2|SPIRE1|ENSG00000134278.10|spire-type actin nucleation factor 1
hg19_v2_chr1_-_226926864_226927038	0.0411958	HOXC9	ENST00000429204.1|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B 	ENST00000366784.1|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B
hg19_v2_chr19_-_46105411_46105481	0.0407235	HOXC9	ENST00000323040.4|GPR4|ENSG00000177464.4|G protein-coupled receptor 4 	ENST00000544371.1|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr11_-_3400442_3400453	0.0390402	HOXC9	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr14_+_62164340_62164443	0.0375062	HOXC9	ENST00000557538.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 	ENST00000539097.1|HIF1A|ENSG00000100644.12|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)
hg19_v2_chr7_+_5468362_5468388	0.0373944	HOXC9	ENST00000608012.1|RP11-1275H24.3|ENSG00000273084.1|RP11-1275H24.3
hg19_v2_chr2_+_162016804_162016814	0.0371983	HOXC9	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr18_-_13915530_13915540	0.0369244	HOXC9	ENST00000327606.3|MC2R|ENSG00000185231.4|melanocortin 2 receptor (adrenocorticotropic hormone)
hg19_v2_chr10_-_31146615_31146708	0.0369053	HOXC9	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr9_+_82187630_82187722	0.0362443	HOXC9	ENST00000265284.6|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chr21_+_30673091_30673135	0.0345073	HOXC9	ENST00000447177.1|BACH1|ENSG00000156273.11|BTB and CNC homology 1, basic leucine zipper transcription factor 1
hg19_v2_chr6_-_135424186_135424200	0.0341785	HOXC9	ENST00000529882.1|HBS1L|ENSG00000112339.10|HBS1-like (S. cerevisiae)
hg19_v2_chr2_+_202047596_202047621	0.0339255	HOXC9	ENST00000286186.6|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000360132.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr19_+_30433372_30433456	0.0324337	HOXC9	ENST00000312051.6|URI1|ENSG00000105176.13|URI1, prefoldin-like chaperone
hg19_v2_chr13_+_96085847_96085864	0.0314478	HOXC9	ENST00000376873.3|CLDN10|ENSG00000134873.5|claudin 10
hg19_v2_chr3_-_69402828_69402852	0.0313243	HOXC9	ENST00000460709.1|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr4_-_39979576_39979588	0.0306513	HOXC9	ENST00000303538.8|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae) 	ENST00000503396.1|PDS5A|ENSG00000121892.10|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)
hg19_v2_chr10_-_127505167_127505201	0.0306497	HOXC9	ENST00000368786.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
hg19_v2_chr14_+_53173890_53173907	0.0299404	HOXC9	ENST00000445930.2|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr11_+_43333513_43333646	0.0295245	HOXC9	ENST00000534695.1|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000455725.2|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000531273.1|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000420461.2|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000378852.3|API5|ENSG00000166181.8|apoptosis inhibitor 5 	ENST00000534600.1|API5|ENSG00000166181.8|apoptosis inhibitor 5
hg19_v2_chr15_-_76304731_76304785	0.0294969	HOXC9	ENST00000394907.3|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr1_+_40862501_40862512	0.0284637	HOXC9	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr10_-_27529486_27529497	0.0283935	HOXC9	ENST00000375888.1|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr16_+_56485402_56485490	0.0272484	HOXC9	ENST00000566157.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000562150.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000561646.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1 	ENST00000568397.1|OGFOD1|ENSG00000087263.12|2-oxoglutarate and iron-dependent oxygenase domain containing 1
hg19_v2_chr2_+_106468204_106468312	0.0269163	HOXC9	ENST00000425756.1|NCK2|ENSG00000071051.9|NCK adaptor protein 2 	ENST00000393349.2|NCK2|ENSG00000071051.9|NCK adaptor protein 2
hg19_v2_chr17_-_55162360_55162385	0.0261517	HOXC9	ENST00000576871.1|RP11-166P13.3|ENSG00000263004.1|RP11-166P13.3	ENST00000576313.1|RP11-166P13.3|ENSG00000263004.1|RP11-166P13.3
hg19_v2_chrX_-_9734038_9734229	0.0246025	HOXC9	ENST00000431126.1|GPR143|ENSG00000101850.8|G protein-coupled receptor 143
hg19_v2_chr17_+_42264556_42264649	0.0245099	HOXC9	ENST00000319511.6|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589785.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000592825.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2 	ENST00000589184.1|TMUB2|ENSG00000168591.11|transmembrane and ubiquitin-like domain containing 2
hg19_v2_chr9_+_131549483_131549606	0.0228932	HOXC9	ENST00000372648.5|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13 	ENST00000539497.1|TBC1D13|ENSG00000107021.11|TBC1 domain family, member 13
hg19_v2_chr13_+_24844979_24844994	0.0225484	HOXC9	ENST00000454083.1|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr11_+_22688615_22688625	0.0216674	HOXC9	ENST00000533363.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr15_-_55541227_55541246	0.0216459	HOXC9	ENST00000566877.1|RAB27A|ENSG00000069974.11|RAB27A, member RAS oncogene family
hg19_v2_chr7_+_106810165_106810374	0.0213737	HOXC9	ENST00000468401.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000497535.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000485846.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr14_-_55907334_55907334	0.0213477	HOXC9	ENST00000247219.5|TBPL2|ENSG00000182521.5|TATA box binding protein like 2
hg19_v2_chrX_+_65384182_65384231	0.0198843	HOXC9	ENST00000441993.2|HEPH|ENSG00000089472.12|hephaestin 	ENST00000419594.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr16_-_48281444_48281479	0.01967	HOXC9	ENST00000537808.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11 	ENST00000569991.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr17_+_33914276_33914386	0.0190327	HOXC9	ENST00000592545.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000538556.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000312678.8|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit 	ENST00000589344.1|AP2B1|ENSG00000006125.12|adaptor-related protein complex 2, beta 1 subunit
hg19_v2_chr12_-_13248732_13248744	0.0183446	HOXC9	ENST00000396302.3|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr3_+_63953415_63953430	0.0177426	HOXC9	ENST00000484332.1|ATXN7|ENSG00000163635.13|ataxin 7
hg19_v2_chr1_+_16348366_16348486	0.0175667	HOXC9	ENST00000375692.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka 	ENST00000420078.1|CLCNKA|ENSG00000186510.7|chloride channel, voltage-sensitive Ka
hg19_v2_chr2_+_114195268_114195340	0.0174284	HOXC9	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr20_+_57414743_57414785	0.0171237	HOXC9	ENST00000313949.7|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr17_+_67498538_67498570	0.0167018	HOXC9	ENST00000589647.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr14_+_52327350_52327371	0.0159597	HOXC9	ENST00000555472.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2 	ENST00000556766.1|GNG2|ENSG00000186469.4|guanine nucleotide binding protein (G protein), gamma 2
hg19_v2_chrX_+_65382381_65382392	0.015713	HOXC9	ENST00000519389.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chrX_-_73512411_73512444	0.0157102	HOXC9	ENST00000602576.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000429124.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chrX_+_65382433_65382486	0.0152276	HOXC9	ENST00000374727.3|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr1_+_158979792_158979814	0.0143038	HOXC9	ENST00000359709.3|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16 	ENST00000430894.2|IFI16|ENSG00000163565.14|interferon, gamma-inducible protein 16
hg19_v2_chr14_+_53173910_53173940	0.0142931	HOXC9	ENST00000606149.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000555339.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6 	ENST00000556813.1|PSMC6|ENSG00000100519.7|proteasome (prosome, macropain) 26S subunit, ATPase, 6
hg19_v2_chr15_+_43425672_43425733	0.0134379	HOXC9	ENST00000260403.2|TMEM62|ENSG00000137842.2|transmembrane protein 62
hg19_v2_chr17_-_9862772_9862784	0.0129622	HOXC9	ENST00000580865.1|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000583882.1|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr5_-_176433693_176433812	0.012692	HOXC9	ENST00000507513.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1 	ENST00000511320.1|UIMC1|ENSG00000087206.12|ubiquitin interaction motif containing 1
hg19_v2_chr1_+_16370271_16370303	0.0126864	HOXC9	ENST00000375679.4|CLCNKB|ENSG00000184908.13|chloride channel, voltage-sensitive Kb
hg19_v2_chr10_+_76871229_76871292	0.0126475	HOXC9	ENST00000372690.3|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr5_+_156696362_156696374	0.0124924	HOXC9	ENST00000377576.3|CYFIP2|ENSG00000055163.14|cytoplasmic FMR1 interacting protein 2
hg19_v2_chr14_-_21566731_21566836	0.0119378	HOXC9	ENST00000360947.3|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr8_-_16050142_16050168	0.0112531	HOXC9	ENST00000536385.1|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1 	ENST00000381998.4|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chr1_+_146714291_146714420	0.00920761	HOXC9	ENST00000431239.1|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369259.3|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000369258.4|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like 	ENST00000361293.5|CHD1L|ENSG00000131778.13|chromodomain helicase DNA binding protein 1-like
hg19_v2_chr4_-_69215467_69215532	0.0079845	HOXC9	ENST00000579690.1|YTHDC1|ENSG00000083896.8|YTH domain containing 1
hg19_v2_chr18_+_22040620_22040693	0.00770174	HOXC9	ENST00000426880.2|HRH4|ENSG00000134489.6|histamine receptor H4
hg19_v2_chr2_+_27760247_27760261	0.00654119	HOXC9	ENST00000447166.1|AC109829.1|ENSG00000233438.1|Uncharacterized protein
hg19_v2_chr1_+_47603109_47603127	0.00612053	HOXC9	ENST00000371890.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000294337.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22 	ENST00000371891.3|CYP4A22|ENSG00000162365.7|cytochrome P450, family 4, subfamily A, polypeptide 22
hg19_v2_chrX_+_65384052_65384112	0.00598744	HOXC9	ENST00000336279.5|HEPH|ENSG00000089472.12|hephaestin 	ENST00000458621.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr4_+_187148556_187148687	0.00568606	HOXC9	ENST00000264690.6|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000446598.2|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000414291.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000513864.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1
hg19_v2_chr7_+_110731062_110731155	0.00483202	HOXC9	ENST00000308478.5|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000451085.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000422987.3|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3 	ENST00000421101.1|LRRN3|ENSG00000173114.8|leucine rich repeat neuronal 3
hg19_v2_chr7_+_57509877_57509895	0.00267838	HOXC9	ENST00000420713.1|ZNF716|ENSG00000182111.8|zinc finger protein 716
hg19_v2_chr2_+_233390890_233390903	0.00227232	HOXC9	ENST00000258385.3|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000536614.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000457943.2|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chrX_-_73512177_73512213	0.00173809	HOXC9	ENST00000603672.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding) 	ENST00000418855.1|FTX|ENSG00000230590.3|FTX transcript, XIST regulator (non-protein coding)
hg19_v2_chr7_+_7606497_7606595	0.00160427	HOXC9	ENST00000340080.4|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000405785.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila) 	ENST00000433635.1|MIOS|ENSG00000164654.11|missing oocyte, meiosis regulator, homolog (Drosophila)
hg19_v2_chr5_-_148442584_148442652	0.00145361	HOXC9	ENST00000394358.2|SH3TC2|ENSG00000169247.7|SH3 domain and tetratricopeptide repeats 2 	ENST00000512049.1|SH3TC2|ENSG00000169247.7|SH3 domain and tetratricopeptide repeats 2
hg19_v2_chr8_+_76452097_76452126	0.000919072	HOXC9	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr2_+_234526272_234526291	0.000822904	HOXC9	ENST00000373450.4|UGT1A1|ENSG00000241635.3|UDP glucuronosyltransferase 1 family, polypeptide A8
