hg19_v2_chr5_+_36606700_36606729	0.346001	FOXJ2	ENST00000416645.2|SLC1A3|ENSG00000079215.9|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v2_chr4_-_140544386_140544413	0.344295	FOXJ2	ENST00000561977.1|RP11-308D13.3|ENSG00000261268.1|RP11-308D13.3
hg19_v2_chr2_+_66918558_66918580	0.318155	FOXJ2	ENST00000435389.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000428590.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000412944.1|AC007392.3|ENSG00000232046.2|AC007392.3
hg19_v2_chr8_+_104383759_104383821	0.284851	FOXJ2	ENST00000415886.2|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr9_+_131684027_131684088	0.275706	FOXJ2	ENST00000426694.1|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1
hg19_v2_chr12_+_21679220_21679252	0.266841	FOXJ2	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr5_+_36606992_36607061	0.261518	FOXJ2	ENST00000505202.1|SLC1A3|ENSG00000079215.9|solute carrier family 1 (glial high affinity glutamate transporter), member 3
hg19_v2_chr12_-_8815299_8815331	0.228306	FOXJ2	ENST00000535336.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chrX_+_102024075_102024146	0.220613	FOXJ2	ENST00000431616.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000440496.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000420471.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000435966.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630
hg19_v2_chr9_+_108424738_108424738	0.209778	FOXJ2	ENST00000334077.3|TAL2|ENSG00000186051.4|T-cell acute lymphocytic leukemia 2
hg19_v2_chr7_+_23637763_23637780	0.19096	FOXJ2	ENST00000410069.1|CCDC126|ENSG00000169193.7|coiled-coil domain containing 126
hg19_v2_chr6_+_30882108_30882159	0.189019	FOXJ2	ENST00000541562.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000421263.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr16_-_66519747_66519747	0.188512	FOXJ2	ENST00000544589.1|AC132186.1|ENSG00000247270.2|CDNA FLJ27243 fis, clone SYN08134; Uncharacterized protein
hg19_v2_chr5_-_10308125_10308142	0.186782	FOXJ2	ENST00000296658.3|CMBL|ENSG00000164237.4|carboxymethylenebutenolidase homolog (Pseudomonas)
hg19_v2_chr4_-_122148620_122148647	0.175619	FOXJ2	ENST00000509841.1|TNIP3|ENSG00000050730.11|TNFAIP3 interacting protein 3
hg19_v2_chr6_+_30881982_30882080	0.175501	FOXJ2	ENST00000321897.5|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000416670.2|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000542001.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial 	ENST00000428017.1|VARS2|ENSG00000137411.12|valyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr17_+_4692230_4692265	0.166516	FOXJ2	ENST00000331264.7|GLTPD2|ENSG00000182327.7|glycolipid transfer protein domain containing 2
hg19_v2_chr12_+_123949053_123949053	0.163922	FOXJ2	ENST00000350887.5|SNRNP35|ENSG00000184209.14|small nuclear ribonucleoprotein 35kDa (U11/U12)
hg19_v2_chr3_+_132036243_132036268	0.160472	FOXJ2	ENST00000475741.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000351273.7|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr17_-_26733179_26733237	0.15958	FOXJ2	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr12_-_7596735_7596781	0.154057	FOXJ2	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr3_-_100551141_100551158	0.149508	FOXJ2	ENST00000478235.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein 	ENST00000471901.1|ABI3BP|ENSG00000154175.12|ABI family, member 3 (NESH) binding protein
hg19_v2_chr9_+_5510558_5510570	0.142404	FOXJ2	ENST00000397747.3|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
hg19_v2_chr21_-_27945562_27945618	0.141825	FOXJ2	ENST00000299340.4|CYYR1|ENSG00000166265.7|cysteine/tyrosine-rich 1 	ENST00000435845.2|CYYR1|ENSG00000166265.7|cysteine/tyrosine-rich 1
hg19_v2_chr9_-_99417562_99417609	0.134192	FOXJ2	ENST00000375234.3|AAED1|ENSG00000158122.7|AhpC/TSA antioxidant enzyme domain containing 1 	ENST00000446045.1|AAED1|ENSG00000158122.7|AhpC/TSA antioxidant enzyme domain containing 1
hg19_v2_chr12_+_79258444_79258455	0.133004	FOXJ2	ENST00000261205.4|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr5_-_138780159_138780180	0.132638	FOXJ2	ENST00000512473.1|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18 	ENST00000515581.1|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18 	ENST00000515277.1|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr12_-_112546547_112546607	0.132471	FOXJ2	ENST00000547133.1|NAA25|ENSG00000111300.5|N(alpha)-acetyltransferase 25, NatB auxiliary subunit
hg19_v2_chr12_-_8815404_8815438	0.132304	FOXJ2	ENST00000359478.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000396549.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr19_+_2819854_2819891	0.130305	FOXJ2	ENST00000317243.5|ZNF554|ENSG00000172006.7|zinc finger protein 554
hg19_v2_chr8_+_103991013_103991127	0.128816	FOXJ2	ENST00000517983.1|KB-1507C5.4|ENSG00000254281.1|KB-1507C5.4
hg19_v2_chrX_+_22056165_22056173	0.127868	FOXJ2	ENST00000535894.1|PHEX|ENSG00000102174.7|phosphate regulating endopeptidase homolog, X-linked
hg19_v2_chr8_+_128426535_128426535	0.127703	FOXJ2	ENST00000465342.2|POU5F1B|ENSG00000212993.3|POU class 5 homeobox 1B
hg19_v2_chr2_+_162016804_162016814	0.126797	FOXJ2	ENST00000392749.2|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000440506.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr14_+_22591276_22591345	0.125939	FOXJ2	ENST00000390455.3|TRAV26-1|ENSG00000211807.3|T cell receptor alpha variable 26-1
hg19_v2_chr12_-_8815215_8815298	0.125913	FOXJ2	ENST00000544889.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000543369.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr7_+_72742178_72742363	0.122287	FOXJ2	ENST00000442793.1|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000413573.2|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa 	ENST00000252037.4|FKBP6|ENSG00000077800.7|FK506 binding protein 6, 36kDa
hg19_v2_chr15_+_42696992_42697017	0.122241	FOXJ2	ENST00000561817.1|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr14_+_52456327_52456344	0.120394	FOXJ2	ENST00000556760.1|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr9_-_71869642_71869642	0.114724	FOXJ2	ENST00000600472.1|AL358113.1|ENSG00000269295.1|Tight junction protein 2 (Zona occludens 2) isoform 1 variant; Uncharacterized protein
hg19_v2_chr9_+_5510492_5510552	0.112237	FOXJ2	ENST00000397745.2|PDCD1LG2|ENSG00000197646.6|programmed cell death 1 ligand 2
hg19_v2_chr9_-_86571628_86571639	0.110659	FOXJ2	ENST00000376344.3|C9orf64|ENSG00000165118.10|chromosome 9 open reading frame 64
hg19_v2_chr5_-_96209315_96209315	0.109314	FOXJ2	ENST00000504056.1|CTD-2260A17.2|ENSG00000247121.2|Uncharacterized protein
hg19_v2_chr10_+_28822417_28822441	0.109249	FOXJ2	ENST00000428935.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil 	ENST00000420266.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil
hg19_v2_chr1_+_244624678_244624739	0.109053	FOXJ2	ENST00000366534.4|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000366533.4|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000428042.1|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101 	ENST00000366531.3|C1orf101|ENSG00000179397.13|chromosome 1 open reading frame 101
hg19_v2_chrX_+_55744228_55744318	0.107902	FOXJ2	ENST00000262850.7|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr18_+_44812072_44812096	0.10763	FOXJ2	ENST00000598649.1|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1	ENST00000586905.2|CTD-2130O13.1|ENSG00000267761.2|CTD-2130O13.1
hg19_v2_chr2_+_47454054_47454089	0.105765	FOXJ2	ENST00000426892.1|AC106869.2|ENSG00000226087.1|AC106869.2
hg19_v2_chr17_+_27046988_27047097	0.104161	FOXJ2	ENST00000496182.1|RPL23A|ENSG00000198242.9|ribosomal protein L23a
hg19_v2_chr10_+_95848824_95848852	0.101089	FOXJ2	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr4_-_90757364_90757396	0.0970456	FOXJ2	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr6_-_99842041_99842087	0.0967017	FOXJ2	ENST00000254759.3|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase 	ENST00000369242.1|COQ3|ENSG00000132423.6|coenzyme Q3 methyltransferase
hg19_v2_chr9_-_21142144_21142144	0.0966815	FOXJ2	ENST00000380229.2|IFNW1|ENSG00000177047.5|interferon, omega 1
hg19_v2_chr15_+_64428529_64428613	0.0963762	FOXJ2	ENST00000560861.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr20_-_34638841_34638928	0.0957057	FOXJ2	ENST00000565493.1|LINC00657|ENSG00000260032.1|long intergenic non-protein coding RNA 657
hg19_v2_chr1_-_43855444_43855478	0.0943147	FOXJ2	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr11_+_61197572_61197620	0.094205	FOXJ2	ENST00000542074.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000534878.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000537782.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2 	ENST00000543265.1|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr1_-_43855479_43855486	0.0920899	FOXJ2	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr1_+_222988464_222988475	0.0904785	FOXJ2	ENST00000420335.1|RP11-452F19.3|ENSG00000228106.1|RP11-452F19.3
hg19_v2_chr1_-_45452240_45452287	0.0883094	FOXJ2	ENST00000372183.3|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000372182.4|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa 	ENST00000360403.2|EIF2B3|ENSG00000070785.12|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa
hg19_v2_chr17_+_27047244_27047317	0.0879236	FOXJ2	ENST00000394938.4|RPL23A|ENSG00000198242.9|ribosomal protein L23a 	ENST00000394935.3|RPL23A|ENSG00000198242.9|ribosomal protein L23a 	ENST00000355731.4|RPL23A|ENSG00000198242.9|ribosomal protein L23a
hg19_v2_chr14_+_52456193_52456320	0.0865786	FOXJ2	ENST00000261700.3|C14orf166|ENSG00000087302.4|chromosome 14 open reading frame 166
hg19_v2_chr12_-_8815477_8815490	0.0860055	FOXJ2	ENST00000433590.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr7_+_132937820_132937860	0.0844993	FOXJ2	ENST00000393161.2|EXOC4|ENSG00000131558.10|exocyst complex component 4 	ENST00000253861.4|EXOC4|ENSG00000131558.10|exocyst complex component 4
hg19_v2_chr6_+_31462658_31462717	0.0802102	FOXJ2	ENST00000538442.1|MICB|ENSG00000204516.5|MHC class I polypeptide-related sequence B
hg19_v2_chr1_+_145883868_145883868	0.0799604	FOXJ2	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr4_-_99851766_99851788	0.0791822	FOXJ2	ENST00000450253.2|EIF4E|ENSG00000151247.8|eukaryotic translation initiation factor 4E
hg19_v2_chr4_-_69083720_69083798	0.0786229	FOXJ2	ENST00000432593.3|TMPRSS11BNL|ENSG00000226894.3|TMPRSS11B N-terminal like
hg19_v2_chr15_-_96590126_96590159	0.0776364	FOXJ2	ENST00000561051.1|RP11-4G2.1|ENSG00000259348.1|RP11-4G2.1
hg19_v2_chr3_-_148939835_148939842	0.0755103	FOXJ2	ENST00000264613.6|CP|ENSG00000047457.9|ceruloplasmin (ferroxidase)
hg19_v2_chr1_+_43855545_43855557	0.074799	FOXJ2	ENST00000372450.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse) 	ENST00000310739.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr1_+_81106951_81107001	0.0729575	FOXJ2	ENST00000443565.1|RP5-887A10.1|ENSG00000234184.1|RP5-887A10.1
hg19_v2_chr4_-_90756769_90756846	0.0728094	FOXJ2	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr17_+_66511540_66511561	0.0728049	FOXJ2	ENST00000588188.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr20_+_12989822_12989835	0.0726976	FOXJ2	ENST00000378194.4|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3
hg19_v2_chr4_+_26344754_26344772	0.0726412	FOXJ2	ENST00000515573.1|RBPJ|ENSG00000168214.16|recombination signal binding protein for immunoglobulin kappa J region
hg19_v2_chr10_-_105992059_105992138	0.0714611	FOXJ2	ENST00000369720.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000369719.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000357060.3|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000428666.1|WDR96|ENSG00000197748.8|WD repeat domain 96 	ENST00000278064.2|WDR96|ENSG00000197748.8|WD repeat domain 96
hg19_v2_chr11_-_57417367_57417401	0.0713817	FOXJ2	ENST00000534810.1|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila)
hg19_v2_chr7_-_80548667_80548688	0.070498	FOXJ2	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr11_+_827248_827326	0.0704348	FOXJ2	ENST00000527089.1|EFCAB4A|ENSG00000177685.12|EF-hand calcium binding domain 4A 	ENST00000530183.1|EFCAB4A|ENSG00000177685.12|EF-hand calcium binding domain 4A
hg19_v2_chr21_-_35899113_35899261	0.0698137	FOXJ2	ENST00000492600.1|RCAN1|ENSG00000159200.13|regulator of calcineurin 1 	ENST00000481448.1|RCAN1|ENSG00000159200.13|regulator of calcineurin 1 	ENST00000381132.2|RCAN1|ENSG00000159200.13|regulator of calcineurin 1
hg19_v2_chr17_-_10633535_10633633	0.0694156	FOXJ2	ENST00000341871.3|TMEM220|ENSG00000187824.4|transmembrane protein 220
hg19_v2_chr7_+_99425633_99425739	0.0692086	FOXJ2	ENST00000354829.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000421837.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000417625.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000342499.4|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000444905.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000415413.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000312017.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000222382.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43
hg19_v2_chr18_-_21852143_21852205	0.0680952	FOXJ2	ENST00000399443.3|OSBPL1A|ENSG00000141447.12|oxysterol binding protein-like 1A
hg19_v2_chr1_-_217804377_217804446	0.0675853	FOXJ2	ENST00000366935.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2 	ENST00000366934.3|GPATCH2|ENSG00000092978.6|G patch domain containing 2
hg19_v2_chr8_+_77596014_77596033	0.0666514	FOXJ2	ENST00000523885.1|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr14_-_94547541_94547591	0.0664304	FOXJ2	ENST00000544005.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000555054.1|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24 	ENST00000330836.5|DDX24|ENSG00000089737.11|DEAD (Asp-Glu-Ala-Asp) box helicase 24
hg19_v2_chr20_+_55926625_55926634	0.0662584	FOXJ2	ENST00000452119.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr20_-_45530365_45530392	0.0658727	FOXJ2	ENST00000414085.1|RP11-323C15.2|ENSG00000236028.1|RP11-323C15.2
hg19_v2_chr1_-_165667545_165667545	0.0655395	FOXJ2	ENST00000538148.1|ALDH9A1|ENSG00000143149.8|aldehyde dehydrogenase 9 family, member A1
hg19_v2_chr17_-_27054952_27054959	0.0649375	FOXJ2	ENST00000580518.1|TLCD1|ENSG00000160606.6|TLC domain containing 1
hg19_v2_chr10_+_28822636_28822692	0.0633656	FOXJ2	ENST00000442148.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil 	ENST00000448193.1|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil
hg19_v2_chr19_+_2819943_2819977	0.0621486	FOXJ2	ENST00000591265.1|ZNF554|ENSG00000172006.7|zinc finger protein 554
hg19_v2_chr11_+_35201826_35201855	0.0620938	FOXJ2	ENST00000531873.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr21_+_40752378_40752418	0.0619467	FOXJ2	ENST00000398753.1|WRB|ENSG00000182093.10|tryptophan rich basic protein 	ENST00000442773.1|WRB|ENSG00000182093.10|tryptophan rich basic protein
hg19_v2_chr20_+_23420322_23420322	0.0607082	FOXJ2	ENST00000347397.1|CSTL1|ENSG00000125823.8|cystatin-like 1
hg19_v2_chr13_-_37573432_37573504	0.0600658	FOXJ2	ENST00000413537.2|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000443765.1|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase 	ENST00000239891.3|ALG5|ENSG00000120697.4|ALG5, dolichyl-phosphate beta-glucosyltransferase
hg19_v2_chr2_+_162016827_162016876	0.059859	FOXJ2	ENST00000429217.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000406287.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator 	ENST00000402568.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr4_+_57774042_57774114	0.0595929	FOXJ2	ENST00000309042.7|REST|ENSG00000084093.11|RE1-silencing transcription factor
hg19_v2_chr1_+_32739733_32739746	0.0582554	FOXJ2	ENST00000333070.4|LCK|ENSG00000182866.12|lymphocyte-specific protein tyrosine kinase
hg19_v2_chr1_+_32739714_32739730	0.0573978	FOXJ2	ENST00000461712.2|LCK|ENSG00000182866.12|lymphocyte-specific protein tyrosine kinase 	ENST00000373562.3|LCK|ENSG00000182866.12|lymphocyte-specific protein tyrosine kinase 	ENST00000477031.2|LCK|ENSG00000182866.12|lymphocyte-specific protein tyrosine kinase 	ENST00000373557.2|LCK|ENSG00000182866.12|lymphocyte-specific protein tyrosine kinase
hg19_v2_chr9_+_5890802_5890922	0.0572636	FOXJ2	ENST00000381477.3|MLANA|ENSG00000120215.5|melan-A 	ENST00000381476.1|MLANA|ENSG00000120215.5|melan-A 	ENST00000381471.1|MLANA|ENSG00000120215.5|melan-A
hg19_v2_chr12_+_56495115_56495115	0.0571136	FOXJ2	ENST00000548861.1|RP11-603J24.9|ENSG00000257411.1|Uncharacterized protein
hg19_v2_chr20_+_36373032_36373047	0.0566045	FOXJ2	ENST00000373473.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr2_+_162016916_162016954	0.0565732	FOXJ2	ENST00000405852.1|TANK|ENSG00000136560.9|TRAF family member-associated NFKB activator
hg19_v2_chr1_+_150122034_150122170	0.0558069	FOXJ2	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chrX_+_55744166_55744222	0.0552808	FOXJ2	ENST00000374941.4|RRAGB|ENSG00000083750.8|Ras-related GTP binding B 	ENST00000414239.1|RRAGB|ENSG00000083750.8|Ras-related GTP binding B
hg19_v2_chr3_-_122102065_122102101	0.0544432	FOXJ2	ENST00000479899.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000291458.5|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58 	ENST00000497726.1|CCDC58|ENSG00000160124.5|coiled-coil domain containing 58
hg19_v2_chr3_+_127317945_127317945	0.0543456	FOXJ2	ENST00000472731.1|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr8_+_101170134_101170252	0.0542941	FOXJ2	ENST00000520643.1|SPAG1|ENSG00000104450.8|sperm associated antigen 1
hg19_v2_chr3_+_128444994_128445044	0.0538183	FOXJ2	ENST00000482525.1|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr8_+_104383728_104383756	0.0538067	FOXJ2	ENST00000330295.5|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr19_-_14196574_14196601	0.0531094	FOXJ2	ENST00000548523.1|C19orf67|ENSG00000188032.5|chromosome 19 open reading frame 67 	ENST00000343945.5|C19orf67|ENSG00000188032.5|chromosome 19 open reading frame 67
hg19_v2_chr9_+_131683174_131683282	0.0525908	FOXJ2	ENST00000372592.3|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1 	ENST00000428610.1|PHYHD1|ENSG00000175287.14|phytanoyl-CoA dioxygenase domain containing 1
hg19_v2_chr16_-_90038866_90038942	0.0520581	FOXJ2	ENST00000314994.3|CENPBD1|ENSG00000177946.4|CENPB DNA-binding domains containing 1
hg19_v2_chr18_+_3447572_3447607	0.0519857	FOXJ2	ENST00000548489.2|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chrX_-_118699325_118699397	0.0516449	FOXJ2	ENST00000320339.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000371594.4|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56 	ENST00000536133.1|CXorf56|ENSG00000018610.9|chromosome X open reading frame 56
hg19_v2_chr1_+_165797024_165797069	0.0515214	FOXJ2	ENST00000372212.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr1_-_27701307_27701322	0.0510557	FOXJ2	ENST00000270879.4|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3 	ENST00000354982.2|FCN3|ENSG00000142748.8|ficolin (collagen/fibrinogen domain containing) 3
hg19_v2_chr20_+_55926583_55926623	0.0497331	FOXJ2	ENST00000395840.2|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr1_+_162039558_162039587	0.0492346	FOXJ2	ENST00000530878.1|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein 	ENST00000361897.5|NOS1AP|ENSG00000198929.8|nitric oxide synthase 1 (neuronal) adaptor protein
hg19_v2_chr7_-_112726393_112726567	0.0483351	FOXJ2	ENST00000449591.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000449735.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000438062.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85 	ENST00000424100.1|GPR85|ENSG00000164604.8|G protein-coupled receptor 85
hg19_v2_chr12_-_123728548_123728574	0.0479274	FOXJ2	ENST00000545406.1|MPHOSPH9|ENSG00000051825.10|M-phase phosphoprotein 9
hg19_v2_chr1_-_156269428_156269428	0.0474059	FOXJ2	ENST00000339922.3|VHLL|ENSG00000189030.8|von Hippel-Lindau tumor suppressor-like
hg19_v2_chr11_-_57417405_57417423	0.0471163	FOXJ2	ENST00000524669.1|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila) 	ENST00000300022.3|YPEL4|ENSG00000166793.6|yippee-like 4 (Drosophila)
hg19_v2_chr1_+_95616933_95616933	0.0465833	FOXJ2	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chrX_-_6453159_6453159	0.0464051	FOXJ2	ENST00000381089.3|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A 	ENST00000398729.1|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A
hg19_v2_chrX_+_99899180_99899215	0.0463233	FOXJ2	ENST00000373004.3|SRPX2|ENSG00000102359.5|sushi-repeat containing protein, X-linked 2
hg19_v2_chr14_+_90863364_90863400	0.0461702	FOXJ2	ENST00000447653.3|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta) 	ENST00000553542.1|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr19_+_7580103_7580178	0.0451348	FOXJ2	ENST00000596712.1|ZNF358|ENSG00000198816.5|zinc finger protein 358
hg19_v2_chrX_+_56644819_56644825	0.0449519	FOXJ2	ENST00000446028.1|RP11-431N15.2|ENSG00000230105.1|RP11-431N15.2
hg19_v2_chr5_-_127418573_127418754	0.0445151	FOXJ2	ENST00000508353.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000508878.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000501652.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3	ENST00000514409.1|CTC-228N24.3|ENSG00000245937.3|CTC-228N24.3
hg19_v2_chr20_+_12989895_12989997	0.0444428	FOXJ2	ENST00000450297.1|SPTLC3|ENSG00000172296.8|serine palmitoyltransferase, long chain base subunit 3
hg19_v2_chr2_+_231921574_231921639	0.0442565	FOXJ2	ENST00000308696.6|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000373635.4|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000440838.1|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 	ENST00000409643.1|PSMD1|ENSG00000173692.8|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
hg19_v2_chr15_+_32933866_32933963	0.0440616	FOXJ2	ENST00000300175.4|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000413748.2|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000494364.1|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein) 	ENST00000497208.1|SCG5|ENSG00000166922.4|secretogranin V (7B2 protein)
hg19_v2_chr9_-_98268883_98268947	0.0439765	FOXJ2	ENST00000551630.1|PTCH1|ENSG00000185920.11|patched 1 	ENST00000548420.1|PTCH1|ENSG00000185920.11|patched 1
hg19_v2_chr1_-_19811132_19811158	0.043961	FOXJ2	ENST00000433834.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr15_+_42697018_42697035	0.0439134	FOXJ2	ENST00000397204.4|CAPN3|ENSG00000092529.18|calpain 3, (p94)
hg19_v2_chr1_-_60392452_60392499	0.0438773	FOXJ2	ENST00000371204.3|CYP2J2|ENSG00000134716.5|cytochrome P450, family 2, subfamily J, polypeptide 2
hg19_v2_chr19_+_57752200_57752260	0.043342	FOXJ2	ENST00000414468.2|ZNF805|ENSG00000204524.5|zinc finger protein 805
hg19_v2_chr12_-_120763739_120763896	0.0426361	FOXJ2	ENST00000549767.1|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas)
hg19_v2_chr1_-_240775447_240775462	0.042544	FOXJ2	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr20_+_55926566_55926578	0.0424798	FOXJ2	ENST00000411894.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1 	ENST00000429339.1|RAE1|ENSG00000101146.8|ribonucleic acid export 1
hg19_v2_chr4_-_38806404_38806537	0.0418724	FOXJ2	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr15_+_67430339_67430366	0.0417386	FOXJ2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr11_+_61197508_61197545	0.0415262	FOXJ2	ENST00000541135.1|RP11-286N22.8|ENSG00000256591.1|Uncharacterized protein  	ENST00000301761.2|SDHAF2|ENSG00000167985.2|succinate dehydrogenase complex assembly factor 2
hg19_v2_chr13_-_46716969_46717015	0.0410819	FOXJ2	ENST00000435666.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr19_+_56989609_56989625	0.0409635	FOXJ2	ENST00000601875.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr4_-_140005443_140005650	0.0403366	FOXJ2	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr6_+_11094266_11094506	0.0402641	FOXJ2	ENST00000416247.2|SMIM13|ENSG00000224531.4|small integral membrane protein 13
hg19_v2_chr2_+_216176540_216176702	0.0384639	FOXJ2	ENST00000236959.9|ATIC|ENSG00000138363.10|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
hg19_v2_chr17_+_57287228_57287413	0.0383268	FOXJ2	ENST00000578922.1|SMG8|ENSG00000167447.8|SMG8 nonsense mediated mRNA decay factor 	ENST00000300917.5|SMG8|ENSG00000167447.8|SMG8 nonsense mediated mRNA decay factor
hg19_v2_chr1_+_91966384_91966454	0.0382929	FOXJ2	ENST00000430031.2|CDC7|ENSG00000097046.8|cell division cycle 7 	ENST00000234626.6|CDC7|ENSG00000097046.8|cell division cycle 7
hg19_v2_chr10_-_49459800_49459841	0.0382165	FOXJ2	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr1_-_38019878_38019905	0.0366723	FOXJ2	ENST00000296215.6|SNIP1|ENSG00000163877.9|Smad nuclear interacting protein 1
hg19_v2_chr12_-_57941004_57941114	0.0361336	FOXJ2	ENST00000550750.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50) 	ENST00000548249.1|DCTN2|ENSG00000175203.11|dynactin 2 (p50)
hg19_v2_chr6_-_121655552_121655592	0.0359998	FOXJ2	ENST00000275159.6|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr3_+_122103014_122103088	0.0353547	FOXJ2	ENST00000232125.5|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000477892.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A 	ENST00000469967.1|FAM162A|ENSG00000114023.11|family with sequence similarity 162, member A
hg19_v2_chr17_-_56494713_56494851	0.0353167	FOXJ2	ENST00000407977.2|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr9_+_4662282_4662345	0.034963	FOXJ2	ENST00000381883.2|PPAPDC2|ENSG00000205808.4|phosphatidic acid phosphatase type 2 domain containing 2
hg19_v2_chr1_+_221054584_221054584	0.0342514	FOXJ2	ENST00000549319.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr16_+_5121814_5121855	0.0337466	FOXJ2	ENST00000262374.5|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 	ENST00000586840.1|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
hg19_v2_chr6_-_56507586_56507794	0.0333613	FOXJ2	ENST00000439203.1|DST|ENSG00000151914.13|dystonin 	ENST00000518935.1|DST|ENSG00000151914.13|dystonin 	ENST00000446842.2|DST|ENSG00000151914.13|dystonin 	ENST00000370765.6|DST|ENSG00000151914.13|dystonin 	ENST00000244364.6|DST|ENSG00000151914.13|dystonin
hg19_v2_chr3_+_132036207_132036218	0.033191	FOXJ2	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr1_+_28879588_28879624	0.0329268	FOXJ2	ENST00000373830.3|TRNAU1AP|ENSG00000180098.5|tRNA selenocysteine 1 associated protein 1
hg19_v2_chr1_+_45212074_45212100	0.0325972	FOXJ2	ENST00000372217.1|KIF2C|ENSG00000142945.8|kinesin family member 2C
hg19_v2_chr12_+_108523133_108523248	0.0323963	FOXJ2	ENST00000547525.1|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr3_+_128444965_128444985	0.0321503	FOXJ2	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chr4_-_47983519_47983583	0.0316245	FOXJ2	ENST00000358519.4|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000544810.1|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1 	ENST00000402813.3|CNGA1|ENSG00000198515.9|cyclic nucleotide gated channel alpha 1
hg19_v2_chr2_+_157330081_157330104	0.0311748	FOXJ2	ENST00000409674.1|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr7_-_33140498_33140517	0.0308631	FOXJ2	ENST00000448915.1|RP9|ENSG00000164610.4|retinitis pigmentosa 9 (autosomal dominant)
hg19_v2_chr19_+_56989485_56989565	0.0304592	FOXJ2	ENST00000585445.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000586091.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000594783.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000592146.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000588158.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000299997.4|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head) 	ENST00000591797.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr2_+_210518057_210518117	0.0301508	FOXJ2	ENST00000452717.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr12_-_96429423_96429439	0.0299847	FOXJ2	ENST00000228740.2|LTA4H|ENSG00000111144.5|leukotriene A4 hydrolase
hg19_v2_chrX_+_7810303_7810303	0.0295896	FOXJ2	ENST00000381059.3|VCX|ENSG00000182583.8|variable charge, X-linked 	ENST00000341408.4|VCX|ENSG00000182583.8|variable charge, X-linked
hg19_v2_chr20_-_44007014_44007033	0.029385	FOXJ2	ENST00000372726.3|TP53TG5|ENSG00000124251.6|TP53 target 5 	ENST00000537995.1|TP53TG5|ENSG00000124251.6|TP53 target 5
hg19_v2_chr21_-_27423339_27423352	0.0288989	FOXJ2	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr3_+_57875711_57875735	0.0280575	FOXJ2	ENST00000442599.2|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr6_-_130543958_130544105	0.0276337	FOXJ2	ENST00000437477.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3 	ENST00000439090.2|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3
hg19_v2_chr17_-_26733604_26733648	0.0271313	FOXJ2	ENST00000584426.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000584995.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr19_+_57751973_57752019	0.0268884	FOXJ2	ENST00000535550.1|ZNF805|ENSG00000204524.5|zinc finger protein 805
hg19_v2_chr1_-_85100703_85100703	0.0266952	FOXJ2	ENST00000370624.1|C1orf180|ENSG00000180869.3|chromosome 1 open reading frame 180
hg19_v2_chr1_+_223889285_223889306	0.0266914	FOXJ2	ENST00000433674.2|CAPN2|ENSG00000162909.13|calpain 2, (m/II) large subunit
hg19_v2_chr4_+_89299885_89299897	0.0264847	FOXJ2	ENST00000380265.5|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 	ENST00000273960.3|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
hg19_v2_chr19_+_57752022_57752108	0.0263553	FOXJ2	ENST00000354309.4|ZNF805|ENSG00000204524.5|zinc finger protein 805
hg19_v2_chr17_-_56494908_56494949	0.0242867	FOXJ2	ENST00000577716.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr3_-_49131788_49131812	0.0238106	FOXJ2	ENST00000395443.2|QRICH1|ENSG00000198218.6|glutamine-rich 1 	ENST00000411682.1|QRICH1|ENSG00000198218.6|glutamine-rich 1
hg19_v2_chrX_+_48660107_48660185	0.0231176	FOXJ2	ENST00000376643.2|HDAC6|ENSG00000094631.14|histone deacetylase 6
hg19_v2_chr1_-_27952741_27952753	0.0230809	FOXJ2	ENST00000399173.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr9_+_110046334_110046368	0.0225273	FOXJ2	ENST00000416373.2|RAD23B|ENSG00000119318.8|RAD23 homolog B (S. cerevisiae)
hg19_v2_chr17_-_56494882_56494902	0.0224363	FOXJ2	ENST00000584437.1|RNF43|ENSG00000108375.8|ring finger protein 43
hg19_v2_chr1_+_197881592_197881635	0.0222898	FOXJ2	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr19_+_49866331_49866346	0.0222821	FOXJ2	ENST00000597873.1|DKKL1|ENSG00000104901.2|dickkopf-like 1
hg19_v2_chr4_-_114438763_114438799	0.0216734	FOXJ2	ENST00000509594.1|CAMK2D|ENSG00000145349.12|calcium/calmodulin-dependent protein kinase II delta
hg19_v2_chr8_-_33424636_33424653	0.0216327	FOXJ2	ENST00000256257.1|RNF122|ENSG00000133874.1|ring finger protein 122
hg19_v2_chr14_+_90863327_90863356	0.0214499	FOXJ2	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr7_+_77469439_77469497	0.0212168	FOXJ2	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr5_+_179135246_179135327	0.0211771	FOXJ2	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chrX_-_19533379_19533379	0.020555	FOXJ2	ENST00000338883.4|MAP3K15|ENSG00000180815.10|mitogen-activated protein kinase kinase kinase 15
hg19_v2_chr4_+_57845024_57845037	0.0205481	FOXJ2	ENST00000431623.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000441246.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chr2_+_210517895_210518021	0.0181725	FOXJ2	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr10_+_90521163_90521163	0.0168663	FOXJ2	ENST00000404459.1|LIPN|ENSG00000204020.5|lipase, family member N
hg19_v2_chr16_+_72459838_72459857	0.0164829	FOXJ2	ENST00000564508.1|AC004158.3|ENSG00000260664.1|AC004158.3
hg19_v2_chr14_+_31959154_31959178	0.0164484	FOXJ2	ENST00000550005.1|NUBPL|ENSG00000151413.12|nucleotide binding protein-like
hg19_v2_chr18_-_3013307_3013342	0.0159286	FOXJ2	ENST00000584294.1|LPIN2|ENSG00000101577.5|lipin 2
hg19_v2_chr1_-_220263096_220263192	0.0154487	FOXJ2	ENST00000463953.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000354807.3|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000414869.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498237.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000498791.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000544404.1|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000480959.2|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1 	ENST00000322067.7|BPNT1|ENSG00000162813.13|3'(2'), 5'-bisphosphate nucleotidase 1
hg19_v2_chr3_+_171757346_171757419	0.0147796	FOXJ2	ENST00000421757.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000415807.2|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000392699.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr18_-_73967160_73967169	0.0147066	FOXJ2	ENST00000579714.1|RP11-94B19.7|ENSG00000265717.1|RP11-94B19.7
hg19_v2_chr17_+_37617721_37617773	0.0126378	FOXJ2	ENST00000584632.1|CDK12|ENSG00000167258.9|cyclin-dependent kinase 12
hg19_v2_chr8_+_134029937_134029944	0.0120387	FOXJ2	ENST00000518108.1|TG|ENSG00000042832.7|thyroglobulin
hg19_v2_chr1_+_221054411_221054411	0.0119168	FOXJ2	ENST00000427693.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr3_+_178865887_178865938	0.0118909	FOXJ2	ENST00000477735.1|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr3_+_10157276_10157377	0.0114107	FOXJ2	ENST00000530758.1|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit 	ENST00000256463.6|BRK1|ENSG00000254999.2|BRICK1, SCAR/WAVE actin-nucleating complex subunit
hg19_v2_chr2_-_239140276_239140355	0.0113215	FOXJ2	ENST00000334973.4|AC016757.3|ENSG00000186235.6|Protein LOC151174
hg19_v2_chr2_+_120770686_120770787	0.0112118	FOXJ2	ENST00000331393.4|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5 	ENST00000443124.1|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr3_+_160822462_160822610	0.0108801	FOXJ2	ENST00000468606.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000460503.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor
hg19_v2_chr6_+_30539153_30539255	0.0107309	FOXJ2	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr19_-_9226439_9226439	0.0103399	FOXJ2	ENST00000293614.1|OR7G1|ENSG00000161807.2|olfactory receptor, family 7, subfamily G, member 1 	ENST00000541538.1|OR7G1|ENSG00000161807.2|olfactory receptor, family 7, subfamily G, member 1
hg19_v2_chr13_-_96329048_96329209	0.0101111	FOXJ2	ENST00000606011.1|DNAJC3-AS1|ENSG00000247400.3|DNAJC3 antisense RNA 1 (head to head) 	ENST00000499499.2|DNAJC3-AS1|ENSG00000247400.3|DNAJC3 antisense RNA 1 (head to head)
hg19_v2_chrX_+_8432871_8432871	0.0097244	FOXJ2	ENST00000381032.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000453306.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B 	ENST00000444481.1|VCX3B|ENSG00000205642.5|variable charge, X-linked 3B
hg19_v2_chr15_-_34628951_34629045	0.00969241	FOXJ2	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr1_-_179846928_179846946	0.00957187	FOXJ2	ENST00000367612.3|TOR1AIP2|ENSG00000169905.8|torsin A interacting protein 2 	ENST00000609928.1|TOR1AIP2|ENSG00000169905.8|torsin A interacting protein 2
hg19_v2_chr1_-_27952617_27952652	0.0094162	FOXJ2	ENST00000457296.1|FGR|ENSG00000000938.8|feline Gardner-Rasheed sarcoma viral oncogene homolog
hg19_v2_chr6_-_170862322_170862429	0.00922091	FOXJ2	ENST00000262193.6|PSMB1|ENSG00000008018.8|proteasome (prosome, macropain) subunit, beta type, 1
hg19_v2_chr10_+_28822236_28822348	0.00827297	FOXJ2	ENST00000347934.4|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil 	ENST00000354911.4|WAC|ENSG00000095787.17|WW domain containing adaptor with coiled-coil
hg19_v2_chr11_+_120081475_120081488	0.00776279	FOXJ2	ENST00000328965.4|OAF|ENSG00000184232.4|OAF homolog (Drosophila)
hg19_v2_chr1_+_93544791_93544807	0.00757297	FOXJ2	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr12_+_27396901_27397108	0.00735963	FOXJ2	ENST00000541191.1|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like 	ENST00000389032.3|STK38L|ENSG00000211455.3|serine/threonine kinase 38 like
hg19_v2_chr4_-_68749699_68749725	0.00724352	FOXJ2	ENST00000545541.1|TMPRSS11D|ENSG00000153802.7|transmembrane protease, serine 11D
hg19_v2_chr10_-_25010795_25010904	0.00669073	FOXJ2	ENST00000416305.1|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21 	ENST00000376410.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr3_-_156878540_156878560	0.0056521	FOXJ2	ENST00000461804.1|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr5_-_34919094_34919094	0.00550838	FOXJ2	ENST00000341754.4|RAD1|ENSG00000113456.14|RAD1 homolog (S. pombe)
hg19_v2_chr2_-_39414848_39414848	0.00544078	FOXJ2	ENST00000451199.1|CDKL4|ENSG00000205111.4|cyclin-dependent kinase-like 4
hg19_v2_chr17_-_33521412_33521412	0.00542038	FOXJ2	ENST00000297307.5|SLC35G3|ENSG00000164729.6|solute carrier family 35, member G3
hg19_v2_chr2_+_120770581_120770608	0.00534851	FOXJ2	ENST00000263713.5|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr21_+_47013566_47013592	0.00472096	FOXJ2	ENST00000441095.1|AL133493.2|ENSG00000233922.1|AL133493.2	ENST00000424569.1|AL133493.2|ENSG00000233922.1|AL133493.2
hg19_v2_chr8_+_38585704_38585867	0.00367158	FOXJ2	ENST00000519416.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1 	ENST00000520615.1|TACC1|ENSG00000147526.15|transforming, acidic coiled-coil containing protein 1
hg19_v2_chr17_+_66511224_66511264	0.00335399	FOXJ2	ENST00000588178.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr20_+_56964169_56964182	0.0031884	FOXJ2	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr3_-_57233966_57234014	0.00310112	FOXJ2	ENST00000473921.1|HESX1|ENSG00000163666.4|HESX homeobox 1 	ENST00000295934.3|HESX1|ENSG00000163666.4|HESX homeobox 1
hg19_v2_chr12_+_6833237_6833248	0.00280102	FOXJ2	ENST00000229251.3|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000539735.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A 	ENST00000538410.1|COPS7A|ENSG00000111652.5|COP9 signalosome subunit 7A
hg19_v2_chr10_+_105005644_105005644	0.00277483	FOXJ2	ENST00000441178.2|RP11-332O19.5|ENSG00000235376.5|ribulose-5-phosphate-3-epimerase-like 1
hg19_v2_chr13_+_43355732_43355757	0.00210277	FOXJ2	ENST00000313851.1|FAM216B|ENSG00000179813.2|family with sequence similarity 216, member B
hg19_v2_chr4_+_89299994_89300015	0.001777	FOXJ2	ENST00000264346.7|HERC6|ENSG00000138642.10|HECT and RLD domain containing E3 ubiquitin protein ligase family member 6
hg19_v2_chr3_+_26735991_26736046	0.00127471	FOXJ2	ENST00000456208.2|LRRC3B|ENSG00000179796.7|leucine rich repeat containing 3B
hg19_v2_chr7_-_115608304_115608352	0.00113065	FOXJ2	ENST00000457268.1|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr12_-_10251576_10251599	0.0010775	FOXJ2	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr12_-_10251539_10251560	0.000877261	FOXJ2	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr10_+_90346519_90346519	0.000702936	FOXJ2	ENST00000371939.3|LIPJ|ENSG00000204022.5|lipase, family member J
hg19_v2_chr4_-_164534657_164534701	0.000623072	FOXJ2	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr7_-_144435985_144436015	0.000603291	FOXJ2	ENST00000549981.1|TPK1|ENSG00000196511.9|thiamin pyrophosphokinase 1
hg19_v2_chr1_-_217250231_217250349	0.000469578	FOXJ2	ENST00000493748.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000463665.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr17_+_25958174_25958254	1.38264e-05	FOXJ2	ENST00000313648.6|LGALS9|ENSG00000168961.12|lectin, galactoside-binding, soluble, 9 	ENST00000577392.1|LGALS9|ENSG00000168961.12|lectin, galactoside-binding, soluble, 9 	ENST00000584661.1|LGALS9|ENSG00000168961.12|lectin, galactoside-binding, soluble, 9 	ENST00000413914.2|LGALS9|ENSG00000168961.12|lectin, galactoside-binding, soluble, 9
