hg19_v2_chr7_+_106415457_106415522	0.63922	FOXA3_FOXC2	ENST00000490162.2|RP5-884M6.1|ENSG00000228742.5|RP5-884M6.1	ENST00000470135.1|RP5-884M6.1|ENSG00000228742.5|RP5-884M6.1
hg19_v2_chr2_-_207078154_207078169	0.280493	FOXA3_FOXC2	ENST00000447845.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr2_-_207078086_207078106	0.274495	FOXA3_FOXC2	ENST00000442134.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr11_+_27076764_27076822	0.274257	FOXA3_FOXC2	ENST00000525090.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr17_+_72426891_72427052	0.223283	FOXA3_FOXC2	ENST00000392627.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr15_-_76352069_76352145	0.222195	FOXA3_FOXC2	ENST00000305435.10|NRG4|ENSG00000169752.12|neuregulin 4 	ENST00000563910.1|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr11_+_65657875_65657875	0.218287	FOXA3_FOXC2	ENST00000312579.2|CCDC85B|ENSG00000175602.2|coiled-coil domain containing 85B
hg19_v2_chr1_+_239882842_239882850	0.21324	FOXA3_FOXC2	ENST00000448020.1|CHRM3|ENSG00000133019.7|cholinergic receptor, muscarinic 3
hg19_v2_chr16_+_77233294_77233341	0.212036	FOXA3_FOXC2	ENST00000378644.4|SYCE1L|ENSG00000205078.5|synaptonemal complex central element protein 1-like
hg19_v2_chr1_-_57431679_57431810	0.211064	FOXA3_FOXC2	ENST00000371237.4|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000535057.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000543257.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide
hg19_v2_chr2_-_192711968_192711981	0.206035	FOXA3_FOXC2	ENST00000304141.4|SDPR|ENSG00000168497.4|serum deprivation response
hg19_v2_chr11_+_34999328_34999334	0.202762	FOXA3_FOXC2	ENST00000526309.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr21_+_17791648_17791775	0.201244	FOXA3_FOXC2	ENST00000602892.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000418813.2|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478 	ENST00000435697.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr4_+_75174180_75174196	0.199403	FOXA3_FOXC2	ENST00000413830.1|EPGN|ENSG00000182585.5|epithelial mitogen
hg19_v2_chrX_-_15402498_15402515	0.197121	FOXA3_FOXC2	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr3_-_193096600_193096632	0.194446	FOXA3_FOXC2	ENST00000446087.1|ATP13A5|ENSG00000187527.6|ATPase type 13A5 	ENST00000342358.4|ATP13A5|ENSG00000187527.6|ATPase type 13A5
hg19_v2_chr10_+_124739964_124739994	0.191585	FOXA3_FOXC2	ENST00000406217.2|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr13_-_86373536_86373623	0.188445	FOXA3_FOXC2	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr2_+_171640291_171640311	0.188182	FOXA3_FOXC2	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr7_+_134832808_134832879	0.188071	FOXA3_FOXC2	ENST00000275767.3|TMEM140|ENSG00000146859.6|transmembrane protein 140
hg19_v2_chr19_+_42806250_42806298	0.186512	FOXA3_FOXC2	ENST00000598490.1|PRR19|ENSG00000188368.5|proline rich 19 	ENST00000341747.3|PRR19|ENSG00000188368.5|proline rich 19
hg19_v2_chr14_-_31926623_31926656	0.18382	FOXA3_FOXC2	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr2_-_175711133_175711158	0.17287	FOXA3_FOXC2	ENST00000409597.1|CHN1|ENSG00000128656.9|chimerin 1 	ENST00000413882.1|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr12_-_78934441_78934474	0.165071	FOXA3_FOXC2	ENST00000546865.1|RP11-171L9.1|ENSG00000257165.1|RP11-171L9.1	ENST00000547089.1|RP11-171L9.1|ENSG00000257165.1|RP11-171L9.1
hg19_v2_chr18_-_25616519_25616549	0.160592	FOXA3_FOXC2	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr13_+_50589390_50589543	0.15623	FOXA3_FOXC2	ENST00000360473.4|KCNRG|ENSG00000198553.4|potassium channel regulator 	ENST00000312942.1|KCNRG|ENSG00000198553.4|potassium channel regulator
hg19_v2_chr4_-_87028478_87028514	0.153115	FOXA3_FOXC2	ENST00000515400.1|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395157.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr2_+_17997763_17997763	0.148117	FOXA3_FOXC2	ENST00000281047.3|MSGN1|ENSG00000151379.3|mesogenin 1
hg19_v2_chr17_+_79953310_79953319	0.14795	FOXA3_FOXC2	ENST00000582355.2|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr19_+_54368001_54368022	0.141719	FOXA3_FOXC2	ENST00000422045.1|AC008440.10|ENSG00000232324.1|AC008440.10
hg19_v2_chr17_+_72427477_72427667	0.14033	FOXA3_FOXC2	ENST00000342648.5|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C 	ENST00000481232.1|GPRC5C|ENSG00000170412.12|G protein-coupled receptor, family C, group 5, member C
hg19_v2_chr7_-_117512264_117512281	0.136881	FOXA3_FOXC2	ENST00000454375.1|CTTNBP2|ENSG00000077063.6|cortactin binding protein 2
hg19_v2_chr7_+_142829162_142829176	0.129507	FOXA3_FOXC2	ENST00000291009.3|PIP|ENSG00000159763.3|prolactin-induced protein
hg19_v2_chr11_+_65851443_65851457	0.129398	FOXA3_FOXC2	ENST00000533756.1|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr8_+_97597148_97597173	0.125087	FOXA3_FOXC2	ENST00000521590.1|SDC2|ENSG00000169439.7|syndecan 2
hg19_v2_chr4_-_186696561_186696634	0.124441	FOXA3_FOXC2	ENST00000445115.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000451701.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000457247.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000435480.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000425679.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000457934.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr17_+_8924837_8924872	0.123729	FOXA3_FOXC2	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr8_+_67579807_67579887	0.121167	FOXA3_FOXC2	ENST00000519289.1|C8orf44-SGK3|ENSG00000270024.1|C8orf44-SGK3 readthrough 	ENST00000519561.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44 	ENST00000521889.1|C8orf44|ENSG00000213865.3|chromosome 8 open reading frame 44
hg19_v2_chr3_-_139195350_139195370	0.11993	FOXA3_FOXC2	ENST00000232217.2|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr3_-_107941209_107941227	0.119913	FOXA3_FOXC2	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr14_-_36988882_36988898	0.11886	FOXA3_FOXC2	ENST00000498187.2|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr14_-_31926701_31926734	0.114583	FOXA3_FOXC2	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr5_+_169011033_169011108	0.114077	FOXA3_FOXC2	ENST00000513795.1|SPDL1|ENSG00000040275.12|spindle apparatus coiled-coil protein 1
hg19_v2_chr17_-_65235916_65235949	0.111976	FOXA3_FOXC2	ENST00000579861.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr12_-_92536433_92536459	0.110833	FOXA3_FOXC2	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr2_-_188312971_188312987	0.109076	FOXA3_FOXC2	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr16_-_4665023_4665047	0.106208	FOXA3_FOXC2	ENST00000591897.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1
hg19_v2_chr12_-_62585203_62585242	0.105924	FOXA3_FOXC2	ENST00000551449.1|FAM19A2|ENSG00000198673.6|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2
hg19_v2_chr15_-_59041954_59042006	0.105419	FOXA3_FOXC2	ENST00000439637.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000558004.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr11_-_16419067_16419108	0.104702	FOXA3_FOXC2	ENST00000533411.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr13_-_40924439_40924445	0.103434	FOXA3_FOXC2	ENST00000400432.3|RP11-172E9.2|ENSG00000230058.1|RP11-172E9.2
hg19_v2_chr8_-_95449155_95449188	0.103336	FOXA3_FOXC2	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr21_-_31588338_31588357	0.101626	FOXA3_FOXC2	ENST00000286809.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr7_+_129906660_129906667	0.10054	FOXA3_FOXC2	ENST00000222481.4|CPA2|ENSG00000158516.7|carboxypeptidase A2 (pancreatic)
hg19_v2_chr16_-_4664860_4664927	0.100355	FOXA3_FOXC2	ENST00000587615.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000587649.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000590965.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000591401.1|UBALD1|ENSG00000153443.8|UBA-like domain containing 1 	ENST00000283474.7|UBALD1|ENSG00000153443.8|UBA-like domain containing 1
hg19_v2_chr19_+_782755_782833	0.0976661	FOXA3_FOXC2	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr1_-_179851611_179851730	0.0969505	FOXA3_FOXC2	ENST00000610272.1|RP11-533E19.7|ENSG00000272906.1|RP11-533E19.7
hg19_v2_chr17_+_61151306_61151320	0.0963347	FOXA3_FOXC2	ENST00000580068.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000580466.1|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr5_-_24645078_24645096	0.0961781	FOXA3_FOXC2	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr12_+_28605426_28605475	0.0950513	FOXA3_FOXC2	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr1_+_172745006_172745045	0.0935732	FOXA3_FOXC2	ENST00000432694.2|RP1-15D23.2|ENSG00000224228.2|RP1-15D23.2
hg19_v2_chr4_+_86396265_86396276	0.0935664	FOXA3_FOXC2	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr14_-_25479811_25479846	0.0930622	FOXA3_FOXC2	ENST00000550887.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr5_+_81601166_81601166	0.0929661	FOXA3_FOXC2	ENST00000439350.1|ATP6AP1L|ENSG00000205464.7|ATPase, H+ transporting, lysosomal accessory protein 1-like
hg19_v2_chr17_-_29641084_29641103	0.0919452	FOXA3_FOXC2	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr17_-_29641104_29641130	0.0918537	FOXA3_FOXC2	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr1_+_174933899_174933955	0.0898417	FOXA3_FOXC2	ENST00000367688.3|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr14_-_94789663_94789731	0.0890307	FOXA3_FOXC2	ENST00000557225.1|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6 	ENST00000341584.3|SERPINA6|ENSG00000170099.5|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6
hg19_v2_chr4_+_57138437_57138570	0.0884276	FOXA3_FOXC2	ENST00000504228.1|KIAA1211|ENSG00000109265.8|KIAA1211 	ENST00000541073.1|KIAA1211|ENSG00000109265.8|KIAA1211
hg19_v2_chr10_-_21186144_21186247	0.0874188	FOXA3_FOXC2	ENST00000377119.1|NEBL|ENSG00000078114.14|nebulette
hg19_v2_chr14_+_74551650_74551680	0.0866156	FOXA3_FOXC2	ENST00000554938.1|LIN52|ENSG00000205659.6|lin-52 homolog (C. elegans)
hg19_v2_chr9_+_67977438_67977438	0.0865501	FOXA3_FOXC2	ENST00000456982.1|RP11-195B21.3|ENSG00000155282.7|Protein LOC644249
hg19_v2_chr17_-_39684550_39684567	0.0863832	FOXA3_FOXC2	ENST00000455635.1|KRT19|ENSG00000171345.9|keratin 19 	ENST00000361566.3|KRT19|ENSG00000171345.9|keratin 19
hg19_v2_chr17_-_36358166_36358166	0.0862987	FOXA3_FOXC2	ENST00000537432.1|TBC1D3|ENSG00000197681.8|TBC1 domain family, member 3
hg19_v2_chr20_+_9146969_9147005	0.0862776	FOXA3_FOXC2	ENST00000416836.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr6_+_101846664_101846702	0.0851885	FOXA3_FOXC2	ENST00000421544.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000413795.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000369138.1|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2 	ENST00000358361.3|GRIK2|ENSG00000164418.15|glutamate receptor, ionotropic, kainate 2
hg19_v2_chr10_+_71561630_71561644	0.0833605	FOXA3_FOXC2	ENST00000398974.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398971.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398968.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398966.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398964.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398969.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000356340.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398972.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000398973.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr14_-_23526739_23526766	0.0812946	FOXA3_FOXC2	ENST00000397359.3|CDH24|ENSG00000139880.15|cadherin 24, type 2 	ENST00000487137.2|CDH24|ENSG00000139880.15|cadherin 24, type 2
hg19_v2_chr4_+_110769258_110769358	0.0802765	FOXA3_FOXC2	ENST00000594814.1|LRIT3|ENSG00000183423.7|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
hg19_v2_chrX_-_80457385_80457441	0.0802328	FOXA3_FOXC2	ENST00000451455.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000436386.1|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5 	ENST00000358130.2|HMGN5|ENSG00000198157.6|high mobility group nucleosome binding domain 5
hg19_v2_chr3_+_177159695_177159709	0.0777009	FOXA3_FOXC2	ENST00000442937.1|LINC00578|ENSG00000228221.1|long intergenic non-protein coding RNA 578
hg19_v2_chr4_-_140223614_140223668	0.0776367	FOXA3_FOXC2	ENST00000394223.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr22_-_39268308_39268319	0.0757786	FOXA3_FOXC2	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr1_-_54405773_54405874	0.0750456	FOXA3_FOXC2	ENST00000371376.1|HSPB11|ENSG00000081870.7|heat shock protein family B (small), member 11
hg19_v2_chr10_-_4285835_4285904	0.0748249	FOXA3_FOXC2	ENST00000454470.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr20_+_9494987_9495027	0.0744426	FOXA3_FOXC2	ENST00000427562.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5 	ENST00000246070.2|LAMP5|ENSG00000125869.5|lysosomal-associated membrane protein family, member 5
hg19_v2_chr10_+_71562180_71562291	0.0740966	FOXA3_FOXC2	ENST00000517713.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000522165.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000520133.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr2_+_68592305_68592405	0.0732356	FOXA3_FOXC2	ENST00000234313.7|PLEK|ENSG00000115956.9|pleckstrin
hg19_v2_chr10_-_46030841_46030846	0.0729253	FOXA3_FOXC2	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr12_-_7596735_7596781	0.0715265	FOXA3_FOXC2	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr21_-_31588365_31588398	0.0700655	FOXA3_FOXC2	ENST00000399899.1|CLDN8|ENSG00000156284.4|claudin 8
hg19_v2_chr17_+_4613918_4614000	0.0689162	FOXA3_FOXC2	ENST00000574954.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000346341.2|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000572457.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000381488.6|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000412477.3|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000571428.1|ARRB2|ENSG00000141480.13|arrestin, beta 2 	ENST00000575877.1|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr3_+_177159744_177159791	0.0686967	FOXA3_FOXC2	ENST00000439009.1|LINC00578|ENSG00000228221.1|long intergenic non-protein coding RNA 578
hg19_v2_chr6_+_142623758_142623795	0.0684111	FOXA3_FOXC2	ENST00000541199.1|GPR126|ENSG00000112414.10|G protein-coupled receptor 126 	ENST00000435011.2|GPR126|ENSG00000112414.10|G protein-coupled receptor 126
hg19_v2_chr17_-_202579_202633	0.068203	FOXA3_FOXC2	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr10_+_70847852_70847874	0.0676675	FOXA3_FOXC2	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr7_+_77469439_77469497	0.0675234	FOXA3_FOXC2	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr12_+_72080253_72080293	0.0674351	FOXA3_FOXC2	ENST00000549735.1|TMEM19|ENSG00000139291.9|transmembrane protein 19
hg19_v2_chr1_+_87797351_87797441	0.0671342	FOXA3_FOXC2	ENST00000370542.1|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr11_-_82708435_82708472	0.0665382	FOXA3_FOXC2	ENST00000525117.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000532548.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr1_+_84609944_84609964	0.0662514	FOXA3_FOXC2	ENST00000370685.3|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr1_-_1356719_1356824	0.0646601	FOXA3_FOXC2	ENST00000520296.1|ANKRD65|ENSG00000235098.4|ankyrin repeat domain 65
hg19_v2_chr9_-_28670283_28670283	0.0638909	FOXA3_FOXC2	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chr7_+_151791095_151791107	0.0621164	FOXA3_FOXC2	ENST00000422997.2|GALNT11|ENSG00000178234.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)
hg19_v2_chr15_+_71185148_71185214	0.0616875	FOXA3_FOXC2	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr9_+_132044730_132044797	0.0614755	FOXA3_FOXC2	ENST00000455981.1|RP11-344B5.2|ENSG00000224307.1|RP11-344B5.2
hg19_v2_chr9_-_75567962_75567979	0.0602497	FOXA3_FOXC2	ENST00000297785.3|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1 	ENST00000376939.1|ALDH1A1|ENSG00000165092.8|aldehyde dehydrogenase 1 family, member A1
hg19_v2_chr15_+_96869165_96869183	0.0600805	FOXA3_FOXC2	ENST00000421109.2|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr10_+_71561649_71561703	0.0599743	FOXA3_FOXC2	ENST00000398978.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000354547.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1 	ENST00000357811.3|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr10_-_4285923_4286104	0.0597766	FOXA3_FOXC2	ENST00000418372.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702 	ENST00000608792.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr17_-_26733604_26733648	0.0597276	FOXA3_FOXC2	ENST00000584426.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000584995.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr1_-_1356628_1356678	0.0573914	FOXA3_FOXC2	ENST00000442470.1|ANKRD65|ENSG00000235098.4|ankyrin repeat domain 65 	ENST00000537107.1|ANKRD65|ENSG00000235098.4|ankyrin repeat domain 65
hg19_v2_chr12_+_48099858_48099877	0.0572637	FOXA3_FOXC2	ENST00000547799.1|RP1-197B17.3|ENSG00000257433.1|RP1-197B17.3
hg19_v2_chr10_-_31288398_31288455	0.0564128	FOXA3_FOXC2	ENST00000538351.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr14_+_56585048_56585150	0.0563747	FOXA3_FOXC2	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr14_+_37126765_37126799	0.0563465	FOXA3_FOXC2	ENST00000402703.2|PAX9|ENSG00000198807.8|paired box 9
hg19_v2_chrX_+_107288280_107288317	0.0549993	FOXA3_FOXC2	ENST00000458383.1|VSIG1|ENSG00000101842.9|V-set and immunoglobulin domain containing 1
hg19_v2_chr9_+_71986182_71986182	0.0546886	FOXA3_FOXC2	ENST00000303068.7|FAM189A2|ENSG00000135063.13|family with sequence similarity 189, member A2
hg19_v2_chr9_-_4299874_4299916	0.0542263	FOXA3_FOXC2	ENST00000381971.3|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3 	ENST00000477901.1|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3
hg19_v2_chr14_-_36990354_36990397	0.0536618	FOXA3_FOXC2	ENST00000518149.1|NKX2-1|ENSG00000136352.13|NK2 homeobox 1
hg19_v2_chr13_+_95364963_95364978	0.0522328	FOXA3_FOXC2	ENST00000438290.2|SOX21-AS1|ENSG00000227640.2|SOX21 antisense RNA 1 (head to head)
hg19_v2_chr16_-_48281305_48281419	0.0520822	FOXA3_FOXC2	ENST00000356608.2|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr17_+_4613776_4613792	0.0516193	FOXA3_FOXC2	ENST00000269260.2|ARRB2|ENSG00000141480.13|arrestin, beta 2
hg19_v2_chr12_+_40787194_40787197	0.0515428	FOXA3_FOXC2	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr1_-_207095324_207095357	0.0506375	FOXA3_FOXC2	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr11_-_116708302_116708347	0.050609	FOXA3_FOXC2	ENST00000375320.1|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000359492.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375329.2|APOA1|ENSG00000118137.5|apolipoprotein A-I 	ENST00000375323.1|APOA1|ENSG00000118137.5|apolipoprotein A-I
hg19_v2_chr22_+_46449674_46449774	0.0500658	FOXA3_FOXC2	ENST00000381051.2|FLJ27365|ENSG00000197182.8|hsa-mir-4763
hg19_v2_chr9_+_131062367_131062367	0.0499918	FOXA3_FOXC2	ENST00000601297.1|AL359091.2|ENSG00000268211.1|CDNA: FLJ21673 fis, clone COL09042; HCG2036511; Uncharacterized protein
hg19_v2_chr17_-_6947225_6947253	0.0497296	FOXA3_FOXC2	ENST00000574600.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11 	ENST00000308009.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11 	ENST00000447225.1|SLC16A11|ENSG00000174326.7|solute carrier family 16, member 11
hg19_v2_chr8_+_52730143_52730143	0.0497101	FOXA3_FOXC2	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr2_-_21266816_21266849	0.0496267	FOXA3_FOXC2	ENST00000399256.4|APOB|ENSG00000084674.9|apolipoprotein B
hg19_v2_chr6_-_26056695_26056701	0.0492273	FOXA3_FOXC2	ENST00000343677.2|HIST1H1C|ENSG00000187837.2|histone cluster 1, H1c
hg19_v2_chr4_-_140223670_140223705	0.049195	FOXA3_FOXC2	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr21_-_36259445_36259519	0.048685	FOXA3_FOXC2	ENST00000399240.1|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr4_-_153303658_153303669	0.0485007	FOXA3_FOXC2	ENST00000296555.5|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr10_+_95848824_95848852	0.0483064	FOXA3_FOXC2	ENST00000371385.3|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1 	ENST00000371375.1|PLCE1|ENSG00000138193.10|phospholipase C, epsilon 1
hg19_v2_chr17_+_74372662_74372742	0.0481761	FOXA3_FOXC2	ENST00000591651.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1 	ENST00000545180.1|SPHK1|ENSG00000176170.9|sphingosine kinase 1
hg19_v2_chr2_+_175260514_175260536	0.0476992	FOXA3_FOXC2	ENST00000424069.1|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000427038.1|SCRN3|ENSG00000144306.9|secernin 3
hg19_v2_chr12_+_59989791_59989874	0.0471133	FOXA3_FOXC2	ENST00000552432.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr16_+_20775358_20775386	0.0469887	FOXA3_FOXC2	ENST00000440284.2|ACSM3|ENSG00000005187.7|acyl-CoA synthetase medium-chain family member 3
hg19_v2_chr1_+_101361782_101361810	0.0468466	FOXA3_FOXC2	ENST00000357650.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr5_+_137673200_137673271	0.0464645	FOXA3_FOXC2	ENST00000434981.2|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr5_+_95998673_95998713	0.0457227	FOXA3_FOXC2	ENST00000514845.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr10_-_46030787_46030824	0.0456953	FOXA3_FOXC2	ENST00000395769.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr21_+_17791838_17791869	0.0454905	FOXA3_FOXC2	ENST00000453910.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr11_-_108464321_108464380	0.0452727	FOXA3_FOXC2	ENST00000265843.4|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr2_-_220042825_220042898	0.0449459	FOXA3_FOXC2	ENST00000409789.1|CNPPD1|ENSG00000115649.11|cyclin Pas1/PHO80 domain containing 1
hg19_v2_chr4_+_147096837_147096912	0.043197	FOXA3_FOXC2	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr4_+_184826418_184826522	0.0431742	FOXA3_FOXC2	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr17_-_41322332_41322420	0.0426873	FOXA3_FOXC2	ENST00000590740.1|RP11-242D8.1|ENSG00000267002.1|RP11-242D8.1
hg19_v2_chr2_-_106054952_106054977	0.0424808	FOXA3_FOXC2	ENST00000336660.5|FHL2|ENSG00000115641.14|four and a half LIM domains 2 	ENST00000393352.3|FHL2|ENSG00000115641.14|four and a half LIM domains 2 	ENST00000607522.1|FHL2|ENSG00000115641.14|four and a half LIM domains 2
hg19_v2_chr11_-_83984231_83984330	0.0423763	FOXA3_FOXC2	ENST00000330014.6|DLG2|ENSG00000150672.12|discs, large homolog 2 (Drosophila) 	ENST00000537455.1|DLG2|ENSG00000150672.12|discs, large homolog 2 (Drosophila) 	ENST00000376106.3|DLG2|ENSG00000150672.12|discs, large homolog 2 (Drosophila) 	ENST00000418306.2|DLG2|ENSG00000150672.12|discs, large homolog 2 (Drosophila) 	ENST00000531015.1|DLG2|ENSG00000150672.12|discs, large homolog 2 (Drosophila)
hg19_v2_chr8_-_71157595_71157616	0.0418544	FOXA3_FOXC2	ENST00000519724.1|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr6_-_122792919_122792970	0.0417423	FOXA3_FOXC2	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr1_-_177939348_177939395	0.0413736	FOXA3_FOXC2	ENST00000464631.2|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr4_+_166794383_166794500	0.0412987	FOXA3_FOXC2	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr1_-_167522982_167523017	0.0408535	FOXA3_FOXC2	ENST00000370509.4|CREG1|ENSG00000143162.7|cellular repressor of E1A-stimulated genes 1
hg19_v2_chr15_+_76016293_76016321	0.0406241	FOXA3_FOXC2	ENST00000332145.2|ODF3L1|ENSG00000182950.2|outer dense fiber of sperm tails 3-like 1
hg19_v2_chr4_+_172734548_172734654	0.0406056	FOXA3_FOXC2	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr1_+_29563011_29563151	0.0404463	FOXA3_FOXC2	ENST00000345512.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000373779.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000356870.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000323874.8|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000428026.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000460170.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U
hg19_v2_chr11_-_66112555_66112601	0.0395175	FOXA3_FOXC2	ENST00000425825.2|BRMS1|ENSG00000174744.9|breast cancer metastasis suppressor 1 	ENST00000359957.3|BRMS1|ENSG00000174744.9|breast cancer metastasis suppressor 1
hg19_v2_chr8_-_28243934_28243993	0.039423	FOXA3_FOXC2	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr4_+_89206076_89206103	0.0392095	FOXA3_FOXC2	ENST00000500009.2|RP11-10L7.1|ENSG00000246375.2|RP11-10L7.1
hg19_v2_chr12_-_120765565_120765592	0.0388479	FOXA3_FOXC2	ENST00000423423.3|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas) 	ENST00000308366.4|PLA2G1B|ENSG00000170890.9|phospholipase A2, group IB (pancreas)
hg19_v2_chr2_-_32490859_32490923	0.0387124	FOXA3_FOXC2	ENST00000404025.2|NLRC4|ENSG00000091106.14|NLR family, CARD domain containing 4
hg19_v2_chr17_-_39140549_39140579	0.038506	FOXA3_FOXC2	ENST00000377755.4|KRT40|ENSG00000204889.6|keratin 40
hg19_v2_chr3_-_107941230_107941417	0.0381807	FOXA3_FOXC2	ENST00000264538.3|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr4_-_186570679_186570760	0.0379983	FOXA3_FOXC2	ENST00000451974.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr5_+_65222500_65222601	0.0379311	FOXA3_FOXC2	ENST00000511297.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein 	ENST00000506030.1|ERBB2IP|ENSG00000112851.10|erbb2 interacting protein
hg19_v2_chr1_+_179851893_179851995	0.0373931	FOXA3_FOXC2	ENST00000531630.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr14_-_74551096_74551171	0.0369574	FOXA3_FOXC2	ENST00000350259.4|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr1_+_40974431_40974447	0.0367663	FOXA3_FOXC2	ENST00000296380.4|EXO5|ENSG00000164002.7|exonuclease 5 	ENST00000432259.1|EXO5|ENSG00000164002.7|exonuclease 5 	ENST00000418186.1|EXO5|ENSG00000164002.7|exonuclease 5
hg19_v2_chr16_+_19619083_19619132	0.0363977	FOXA3_FOXC2	ENST00000538552.1|C16orf62|ENSG00000103544.10|chromosome 16 open reading frame 62
hg19_v2_chr19_+_47421933_47421933	0.0349733	FOXA3_FOXC2	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr9_+_4839762_4839779	0.0336053	FOXA3_FOXC2	ENST00000448872.2|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1 	ENST00000441844.1|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1
hg19_v2_chr20_+_9049742_9049765	0.0335048	FOXA3_FOXC2	ENST00000437503.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr1_-_146696901_146696974	0.0334184	FOXA3_FOXC2	ENST00000369272.3|FMO5|ENSG00000131781.8|flavin containing monooxygenase 5 	ENST00000441068.2|FMO5|ENSG00000131781.8|flavin containing monooxygenase 5
hg19_v2_chr2_-_172290482_172290596	0.0332805	FOXA3_FOXC2	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr2_-_65593784_65593817	0.0329842	FOXA3_FOXC2	ENST00000443619.2|SPRED2|ENSG00000198369.5|sprouty-related, EVH1 domain containing 2
hg19_v2_chr18_-_53070913_53070945	0.0327886	FOXA3_FOXC2	ENST00000568186.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564228.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr20_+_44519948_44519986	0.0327843	FOXA3_FOXC2	ENST00000354880.5|CTSA|ENSG00000064601.12|cathepsin A 	ENST00000191018.5|CTSA|ENSG00000064601.12|cathepsin A
hg19_v2_chr20_-_43150601_43150751	0.0327328	FOXA3_FOXC2	ENST00000541235.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000255175.1|SERINC3|ENSG00000132824.9|serine incorporator 3 	ENST00000342374.4|SERINC3|ENSG00000132824.9|serine incorporator 3
hg19_v2_chr19_+_50380682_50380822	0.032389	FOXA3_FOXC2	ENST00000221543.5|TBC1D17|ENSG00000104946.6|TBC1 domain family, member 17
hg19_v2_chr12_+_21525818_21525862	0.0323663	FOXA3_FOXC2	ENST00000240652.3|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000542023.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide 	ENST00000537593.1|IAPP|ENSG00000121351.3|islet amyloid polypeptide
hg19_v2_chr20_+_31870927_31870969	0.0318902	FOXA3_FOXC2	ENST00000253354.1|BPIFB1|ENSG00000125999.6|BPI fold containing family B, member 1
hg19_v2_chr14_-_74551172_74551196	0.0315893	FOXA3_FOXC2	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr17_-_26697304_26697373	0.0312842	FOXA3_FOXC2	ENST00000536498.1|VTN|ENSG00000109072.9|vitronectin
hg19_v2_chr1_+_73771844_73771922	0.0311405	FOXA3_FOXC2	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr12_-_21928515_21928544	0.0308011	FOXA3_FOXC2	ENST00000537950.1|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr20_+_44520009_44520020	0.0305316	FOXA3_FOXC2	ENST00000607482.1|CTSA|ENSG00000064601.12|cathepsin A 	ENST00000372459.2|CTSA|ENSG00000064601.12|cathepsin A
hg19_v2_chrX_-_47863348_47863412	0.0300024	FOXA3_FOXC2	ENST00000376943.3|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000396965.1|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000305127.6|ZNF182|ENSG00000147118.6|zinc finger protein 182
hg19_v2_chr2_+_220042933_220042985	0.0297804	FOXA3_FOXC2	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr11_-_108464465_108464507	0.0295509	FOXA3_FOXC2	ENST00000525344.1|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr1_-_43855444_43855478	0.0295262	FOXA3_FOXC2	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr14_+_105267250_105267250	0.0292267	FOXA3_FOXC2	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr15_+_38964048_38964101	0.0291641	FOXA3_FOXC2	ENST00000560203.1|RP11-275I4.2|ENSG00000259747.1|RP11-275I4.2	ENST00000557946.1|RP11-275I4.2|ENSG00000259747.1|RP11-275I4.2
hg19_v2_chr1_+_172389821_172389833	0.0287338	FOXA3_FOXC2	ENST00000367727.4|C1orf105|ENSG00000180999.6|chromosome 1 open reading frame 105
hg19_v2_chr6_-_159466042_159466066	0.0284034	FOXA3_FOXC2	ENST00000338313.5|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr7_+_116654958_116655009	0.0282164	FOXA3_FOXC2	ENST00000449366.1|ST7|ENSG00000004866.14|suppression of tumorigenicity 7
hg19_v2_chr6_-_112575912_112575931	0.0280088	FOXA3_FOXC2	ENST00000522006.1|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000230538.7|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000519932.1|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr1_+_24645865_24645881	0.0278868	FOXA3_FOXC2	ENST00000342072.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr6_-_159466136_159466184	0.0276885	FOXA3_FOXC2	ENST00000367066.3|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein 	ENST00000326965.6|TAGAP|ENSG00000164691.12|T-cell activation RhoGTPase activating protein
hg19_v2_chr5_+_95998714_95998744	0.0273601	FOXA3_FOXC2	ENST00000506811.1|CAST|ENSG00000153113.19|calpastatin 	ENST00000514055.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr1_+_24645807_24645819	0.0273107	FOXA3_FOXC2	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr4_-_174256276_174256303	0.0271629	FOXA3_FOXC2	ENST00000296503.5|HMGB2|ENSG00000164104.7|high mobility group box 2
hg19_v2_chrX_+_65382433_65382486	0.0270754	FOXA3_FOXC2	ENST00000374727.3|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr5_+_135468516_135468621	0.0270021	FOXA3_FOXC2	ENST00000507118.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000511116.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545279.1|SMAD5|ENSG00000113658.12|SMAD family member 5 	ENST00000545620.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr14_+_51706886_51707006	0.0267539	FOXA3_FOXC2	ENST00000457354.2|TMX1|ENSG00000139921.8|thioredoxin-related transmembrane protein 1
hg19_v2_chr7_+_134464414_134464429	0.0265851	FOXA3_FOXC2	ENST00000361901.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr6_-_112575758_112575802	0.0264795	FOXA3_FOXC2	ENST00000431543.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000453937.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000368638.4|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000389463.4|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr1_+_61548225_61548299	0.0264243	FOXA3_FOXC2	ENST00000371187.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr11_-_18062335_18062335	0.0261306	FOXA3_FOXC2	ENST00000341556.2|TPH1|ENSG00000129167.5|tryptophan hydroxylase 1
hg19_v2_chr3_+_171561127_171561306	0.0260642	FOXA3_FOXC2	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr15_-_59041768_59041950	0.0258654	FOXA3_FOXC2	ENST00000402627.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000396140.2|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000559053.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000561288.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr12_-_66275350_66275368	0.0255768	FOXA3_FOXC2	ENST00000536648.1|RP11-366L20.2|ENSG00000197301.3|Uncharacterized protein
hg19_v2_chr1_+_24646002_24646056	0.0255017	FOXA3_FOXC2	ENST00000356046.2|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr7_+_134464376_134464413	0.0252473	FOXA3_FOXC2	ENST00000454108.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000361675.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr10_+_35484053_35484076	0.0250664	FOXA3_FOXC2	ENST00000487763.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000473940.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000488328.1|CREM|ENSG00000095794.15|cAMP responsive element modulator 	ENST00000356917.5|CREM|ENSG00000095794.15|cAMP responsive element modulator
hg19_v2_chr4_-_186696515_186696542	0.0250498	FOXA3_FOXC2	ENST00000456596.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000414724.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr20_+_11898507_11898565	0.0249829	FOXA3_FOXC2	ENST00000378226.2|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr14_-_23299009_23299029	0.0249543	FOXA3_FOXC2	ENST00000488800.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr19_+_50380917_50380938	0.0245402	FOXA3_FOXC2	ENST00000535102.2|TBC1D17|ENSG00000104946.6|TBC1 domain family, member 17
hg19_v2_chr4_-_186696425_186696452	0.0243858	FOXA3_FOXC2	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr3_+_119316721_119316739	0.0243038	FOXA3_FOXC2	ENST00000488919.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A 	ENST00000495992.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr14_-_21562648_21562659	0.024013	FOXA3_FOXC2	ENST00000555270.1|ZNF219|ENSG00000165804.11|zinc finger protein 219
hg19_v2_chr1_-_246729544_246729626	0.0234402	FOXA3_FOXC2	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr12_-_56326402_56326424	0.0232065	FOXA3_FOXC2	ENST00000547925.1|WIBG|ENSG00000170473.12|within bgcn homolog (Drosophila)
hg19_v2_chr2_+_109223595_109223617	0.0231272	FOXA3_FOXC2	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_24646263_24646304	0.0229743	FOXA3_FOXC2	ENST00000524724.1|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr14_-_70263979_70264009	0.0229195	FOXA3_FOXC2	ENST00000216540.4|SLC10A1|ENSG00000100652.4|solute carrier family 10 (sodium/bile acid cotransporter), member 1
hg19_v2_chr6_+_125524785_125524861	0.0227014	FOXA3_FOXC2	ENST00000392482.2|TPD52L1|ENSG00000111907.16|tumor protein D52-like 1
hg19_v2_chr14_-_99737822_99737861	0.0225222	FOXA3_FOXC2	ENST00000345514.2|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein) 	ENST00000443726.2|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr20_-_55841398_55841458	0.0225018	FOXA3_FOXC2	ENST00000395864.3|BMP7|ENSG00000101144.8|bone morphogenetic protein 7
hg19_v2_chr12_-_772901_772945	0.0223606	FOXA3_FOXC2	ENST00000305108.4|NINJ2|ENSG00000171840.7|ninjurin 2
hg19_v2_chr4_+_169013666_169013697	0.0223454	FOXA3_FOXC2	ENST00000359299.3|ANXA10|ENSG00000109511.6|annexin A10
hg19_v2_chr17_-_79212825_79212865	0.0221424	FOXA3_FOXC2	ENST00000374769.2|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr7_-_81635106_81635130	0.0219345	FOXA3_FOXC2	ENST00000443883.1|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr19_-_36019123_36019253	0.0218667	FOXA3_FOXC2	ENST00000588674.1|SBSN|ENSG00000189001.6|suprabasin 	ENST00000452271.2|SBSN|ENSG00000189001.6|suprabasin 	ENST00000518157.1|SBSN|ENSG00000189001.6|suprabasin
hg19_v2_chr2_+_166150541_166150594	0.0218638	FOXA3_FOXC2	ENST00000283256.6|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr6_+_12717892_12717903	0.021773	FOXA3_FOXC2	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr7_+_134430212_134430237	0.0217364	FOXA3_FOXC2	ENST00000436461.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chrX_+_65382381_65382392	0.0211973	FOXA3_FOXC2	ENST00000519389.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr12_+_96588368_96588394	0.0211436	FOXA3_FOXC2	ENST00000547860.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr14_+_74034310_74034345	0.0211178	FOXA3_FOXC2	ENST00000538782.1|ACOT2|ENSG00000119673.10|acyl-CoA thioesterase 2
hg19_v2_chr2_-_180427304_180427323	0.02109	FOXA3_FOXC2	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr1_+_61547405_61547534	0.0207093	FOXA3_FOXC2	ENST00000371189.4|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr7_+_73242490_73242532	0.0205553	FOXA3_FOXC2	ENST00000431918.1|CLDN4|ENSG00000189143.8|claudin 4
hg19_v2_chr11_-_82708519_82708523	0.0202429	FOXA3_FOXC2	ENST00000534301.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr16_-_48281444_48281479	0.0197213	FOXA3_FOXC2	ENST00000537808.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11 	ENST00000569991.1|ABCC11|ENSG00000121270.11|ATP-binding cassette, sub-family C (CFTR/MRP), member 11
hg19_v2_chr17_-_66951382_66951411	0.019673	FOXA3_FOXC2	ENST00000586539.1|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chr3_+_161214596_161214596	0.0194158	FOXA3_FOXC2	ENST00000327928.4|OTOL1|ENSG00000182447.4|otolin 1
hg19_v2_chrX_+_10124977_10125036	0.0189971	FOXA3_FOXC2	ENST00000380833.4|CLCN4|ENSG00000073464.7|chloride channel, voltage-sensitive 4
hg19_v2_chr15_+_59910132_59910144	0.0189846	FOXA3_FOXC2	ENST00000559200.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr4_+_146403912_146403972	0.0189779	FOXA3_FOXC2	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr1_-_150669604_150669643	0.018939	FOXA3_FOXC2	ENST00000427665.1|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like 	ENST00000540514.1|GOLPH3L|ENSG00000143457.6|golgi phosphoprotein 3-like
hg19_v2_chr11_-_119247004_119247066	0.0187568	FOXA3_FOXC2	ENST00000531070.1|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr7_+_134576317_134576374	0.0185097	FOXA3_FOXC2	ENST00000424922.1|CALD1|ENSG00000122786.15|caldesmon 1 	ENST00000495522.1|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr7_-_107968921_107968937	0.0184875	FOXA3_FOXC2	ENST00000442580.1|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr13_+_52598827_52598827	0.0183397	FOXA3_FOXC2	ENST00000521776.2|UTP14C|ENSG00000253797.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v2_chr3_-_71114066_71114114	0.0183096	FOXA3_FOXC2	ENST00000485326.2|FOXP1|ENSG00000114861.14|forkhead box P1
hg19_v2_chrX_+_90689810_90689826	0.0177194	FOXA3_FOXC2	ENST00000312600.3|PABPC5|ENSG00000174740.7|poly(A) binding protein, cytoplasmic 5
hg19_v2_chr4_-_74486217_74486273	0.0176468	FOXA3_FOXC2	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr1_+_179851176_179851197	0.0174013	FOXA3_FOXC2	ENST00000528443.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr7_+_134576151_134576171	0.0169208	FOXA3_FOXC2	ENST00000393118.2|CALD1|ENSG00000122786.15|caldesmon 1
hg19_v2_chr20_+_9049682_9049710	0.0168234	FOXA3_FOXC2	ENST00000334005.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4 	ENST00000378473.3|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr5_+_61708488_61708578	0.0162875	FOXA3_FOXC2	ENST00000505902.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr2_-_161056762_161056799	0.0160343	FOXA3_FOXC2	ENST00000428609.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409967.2|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr17_+_79213039_79213106	0.0156705	FOXA3_FOXC2	ENST00000431388.2|C17orf89|ENSG00000224877.3|chromosome 17 open reading frame 89
hg19_v2_chr22_-_30867973_30868036	0.0156206	FOXA3_FOXC2	ENST00000402286.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000401751.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000539629.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000403066.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000215812.4|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr2_+_136343820_136343897	0.0155182	FOXA3_FOXC2	ENST00000410054.1|R3HDM1|ENSG00000048991.12|R3H domain containing 1
hg19_v2_chr12_+_94071129_94071175	0.01512	FOXA3_FOXC2	ENST00000552983.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000332896.3|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000552033.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain 	ENST00000548483.1|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v2_chr15_-_50411412_50411437	0.0147919	FOXA3_FOXC2	ENST00000284509.6|ATP8B4|ENSG00000104043.10|ATPase, class I, type 8B, member 4
hg19_v2_chr2_+_136343943_136344007	0.0147751	FOXA3_FOXC2	ENST00000409606.1|R3HDM1|ENSG00000048991.12|R3H domain containing 1
hg19_v2_chr1_+_114471809_114471855	0.0144439	FOXA3_FOXC2	ENST00000426820.2|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr1_+_104198640_104198640	0.0142958	FOXA3_FOXC2	ENST00000422549.1|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr9_-_3469181_3469181	0.014026	FOXA3_FOXC2	ENST00000366116.2|AL365202.1|ENSG00000203286.4|Uncharacterized protein
hg19_v2_chr6_+_108882069_108882087	0.0137193	FOXA3_FOXC2	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr19_-_46088068_46088100	0.0131991	FOXA3_FOXC2	ENST00000263275.4|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) 	ENST00000323060.3|OPA3|ENSG00000125741.4|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
hg19_v2_chr8_+_95908041_95908065	0.0131195	FOXA3_FOXC2	ENST00000396113.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 	ENST00000519136.1|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr4_+_184365744_184365797	0.0129157	FOXA3_FOXC2	ENST00000504169.1|CDKN2AIP|ENSG00000168564.5|CDKN2A interacting protein 	ENST00000302350.4|CDKN2AIP|ENSG00000168564.5|CDKN2A interacting protein
hg19_v2_chr3_+_119316689_119316710	0.0126597	FOXA3_FOXC2	ENST00000273371.4|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr2_+_169659121_169659157	0.0125907	FOXA3_FOXC2	ENST00000397206.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking 	ENST00000397209.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking 	ENST00000421711.2|NOSTRIN|ENSG00000163072.10|nitric oxide synthase trafficking
hg19_v2_chr19_-_15443318_15443373	0.0123392	FOXA3_FOXC2	ENST00000360016.5|BRD4|ENSG00000141867.13|bromodomain containing 4
hg19_v2_chr2_+_105050794_105050854	0.0122121	FOXA3_FOXC2	ENST00000429464.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000414442.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102 	ENST00000447380.1|AC013402.2|ENSG00000235597.1|long intergenic non-protein coding RNA 1102
hg19_v2_chr5_+_140710061_140710252	0.0117646	FOXA3_FOXC2	ENST00000517417.1|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1 	ENST00000378105.3|PCDHGA1|ENSG00000204956.4|protocadherin gamma subfamily A, 1
hg19_v2_chr1_-_151431674_151431691	0.0115617	FOXA3_FOXC2	ENST00000531094.1|POGZ|ENSG00000143442.17|pogo transposable element with ZNF domain
hg19_v2_chr14_+_38033252_38033405	0.0115097	FOXA3_FOXC2	ENST00000554829.1|RP11-356O9.1|ENSG00000258414.1|RP11-356O9.1
hg19_v2_chr4_-_74486347_74486348	0.0114334	FOXA3_FOXC2	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr20_+_45338126_45338303	0.010991	FOXA3_FOXC2	ENST00000359271.2|SLC2A10|ENSG00000197496.4|solute carrier family 2 (facilitated glucose transporter), member 10
hg19_v2_chr2_-_161056802_161056815	0.0108672	FOXA3_FOXC2	ENST00000283249.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409872.1|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr15_-_65321943_65321984	0.0107952	FOXA3_FOXC2	ENST00000220058.4|MTFMT|ENSG00000103707.5|mitochondrial methionyl-tRNA formyltransferase
hg19_v2_chr17_-_79212884_79212895	0.0105483	FOXA3_FOXC2	ENST00000300714.3|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr6_-_24666819_24666974	0.0104812	FOXA3_FOXC2	ENST00000341060.3|TDP2|ENSG00000111802.9|tyrosyl-DNA phosphodiesterase 2
hg19_v2_chr4_+_15341442_15341589	0.010472	FOXA3_FOXC2	ENST00000397700.2|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000295297.4|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr20_-_7921090_7921121	0.0104242	FOXA3_FOXC2	ENST00000378789.3|HAO1|ENSG00000101323.4|hydroxyacid oxidase (glycolate oxidase) 1
hg19_v2_chr17_-_26733179_26733237	0.0102043	FOXA3_FOXC2	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr18_+_61575200_61575230	0.0100439	FOXA3_FOXC2	ENST00000238508.3|SERPINB10|ENSG00000242550.1|serpin peptidase inhibitor, clade B (ovalbumin), member 10
hg19_v2_chr16_+_69958887_69958927	0.0100379	FOXA3_FOXC2	ENST00000568684.1|WWP2|ENSG00000198373.8|WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr2_+_28974531_28974551	0.00990179	FOXA3_FOXC2	ENST00000420282.1|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr21_+_17792672_17792775	0.00985508	FOXA3_FOXC2	ENST00000602620.1|LINC00478|ENSG00000215386.6|long intergenic non-protein coding RNA 478
hg19_v2_chr6_-_42016385_42016706	0.00959781	FOXA3_FOXC2	ENST00000502771.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000508143.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000514588.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000510503.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000415497.2|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000372988.4|CCND3|ENSG00000112576.8|cyclin D3
hg19_v2_chr10_+_123923105_123923160	0.00944325	FOXA3_FOXC2	ENST00000368999.1|TACC2|ENSG00000138162.13|transforming, acidic coiled-coil containing protein 2
hg19_v2_chr7_-_91794590_91794590	0.00932998	FOXA3_FOXC2	ENST00000430130.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1 	ENST00000454089.2|LRRD1|ENSG00000240720.3|leucine-rich repeats and death domain containing 1
hg19_v2_chr15_+_99433570_99433585	0.00923897	FOXA3_FOXC2	ENST00000558898.1|IGF1R|ENSG00000140443.9|insulin-like growth factor 1 receptor
hg19_v2_chr1_-_223308098_223308225	0.00915525	FOXA3_FOXC2	ENST00000342210.6|TLR5|ENSG00000187554.7|toll-like receptor 5
hg19_v2_chr20_-_55841662_55841736	0.00894562	FOXA3_FOXC2	ENST00000395863.3|BMP7|ENSG00000101144.8|bone morphogenetic protein 7 	ENST00000450594.2|BMP7|ENSG00000101144.8|bone morphogenetic protein 7
hg19_v2_chr5_+_125706998_125707018	0.0086934	FOXA3_FOXC2	ENST00000506445.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr12_+_94071341_94071493	0.00861845	FOXA3_FOXC2	ENST00000542893.2|CRADD|ENSG00000169372.8|CASP2 and RIPK1 domain containing adaptor with death domain
hg19_v2_chr6_+_72922505_72922516	0.00851923	FOXA3_FOXC2	ENST00000401910.3|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr19_-_18902106_18902123	0.00844324	FOXA3_FOXC2	ENST00000542601.2|COMP|ENSG00000105664.6|cartilage oligomeric matrix protein 	ENST00000425807.1|COMP|ENSG00000105664.6|cartilage oligomeric matrix protein 	ENST00000222271.2|COMP|ENSG00000105664.6|cartilage oligomeric matrix protein
hg19_v2_chr6_+_72922590_72922605	0.008188	FOXA3_FOXC2	ENST00000523963.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr1_+_104293028_104293028	0.00800978	FOXA3_FOXC2	ENST00000370079.3|AMY1C|ENSG00000187733.6|amylase, alpha 1C (salivary)
hg19_v2_chr10_+_124320195_124320216	0.00780222	FOXA3_FOXC2	ENST00000359586.6|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr10_+_71561704_71561874	0.00731782	FOXA3_FOXC2	ENST00000520267.1|COL13A1|ENSG00000197467.9|collagen, type XIII, alpha 1
hg19_v2_chr2_+_162165038_162165111	0.00692806	FOXA3_FOXC2	ENST00000437630.1|PSMD14|ENSG00000115233.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
hg19_v2_chr1_+_24645915_24645973	0.00691662	FOXA3_FOXC2	ENST00000350501.5|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr10_-_75168071_75168165	0.0067046	FOXA3_FOXC2	ENST00000394847.3|ANXA7|ENSG00000138279.11|annexin A7
hg19_v2_chr12_-_122018346_122018389	0.00666507	FOXA3_FOXC2	ENST00000377069.4|KDM2B|ENSG00000089094.12|lysine (K)-specific demethylase 2B
hg19_v2_chrX_-_133792480_133792522	0.00666003	FOXA3_FOXC2	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chr6_+_30103885_30103922	0.00654684	FOXA3_FOXC2	ENST00000396581.1|TRIM40|ENSG00000204614.4|tripartite motif containing 40
hg19_v2_chr4_+_79567233_79567248	0.00624862	FOXA3_FOXC2	ENST00000514130.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr12_-_15865844_15865927	0.00622319	FOXA3_FOXC2	ENST00000543612.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr1_-_246357029_246357043	0.00609507	FOXA3_FOXC2	ENST00000391836.2|SMYD3|ENSG00000185420.14|SET and MYND domain containing 3
hg19_v2_chr1_+_179851410_179851447	0.00603005	FOXA3_FOXC2	ENST00000271583.3|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1 	ENST00000606911.2|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr9_+_129097520_129097531	0.00586562	FOXA3_FOXC2	ENST00000436593.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr14_-_99737565_99737617	0.00586172	FOXA3_FOXC2	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chr1_+_179851999_179852024	0.00566437	FOXA3_FOXC2	ENST00000527391.1|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr7_+_106505696_106505798	0.00560617	FOXA3_FOXC2	ENST00000440650.2|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000496166.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000473541.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
hg19_v2_chr12_-_45315625_45315636	0.00556768	FOXA3_FOXC2	ENST00000552993.1|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr6_-_161085291_161085308	0.00548541	FOXA3_FOXC2	ENST00000316300.5|LPA|ENSG00000198670.7|lipoprotein, Lp(a)
hg19_v2_chr1_+_12806141_12806199	0.00547121	FOXA3_FOXC2	ENST00000288048.5|C1orf158|ENSG00000157330.5|chromosome 1 open reading frame 158
hg19_v2_chr13_-_36429763_36429779	0.00489837	FOXA3_FOXC2	ENST00000379893.1|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr6_-_112575687_112575755	0.00484846	FOXA3_FOXC2	ENST00000521398.1|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000424408.2|LAMA4|ENSG00000112769.14|laminin, alpha 4 	ENST00000243219.3|LAMA4|ENSG00000112769.14|laminin, alpha 4
hg19_v2_chr5_+_140529630_140529683	0.00476209	FOXA3_FOXC2	ENST00000543635.1|PCDHB6|ENSG00000113211.3|protocadherin beta 6
hg19_v2_chr3_-_105588231_105588396	0.00472186	FOXA3_FOXC2	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr8_-_23261589_23261753	0.00456824	FOXA3_FOXC2	ENST00000524168.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000523833.2|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000519243.1|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2 	ENST00000389131.3|LOXL2|ENSG00000134013.11|lysyl oxidase-like 2
hg19_v2_chr16_+_67381263_67381284	0.00441387	FOXA3_FOXC2	ENST00000541146.1|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36 	ENST00000563189.1|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36 	ENST00000290940.7|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36
hg19_v2_chr1_+_18958008_18958023	0.00439401	FOXA3_FOXC2	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chrX_+_105936982_105937024	0.00426258	FOXA3_FOXC2	ENST00000418562.1|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr19_+_15160130_15160195	0.00373867	FOXA3_FOXC2	ENST00000427043.3|CASP14|ENSG00000105141.4|caspase 14, apoptosis-related cysteine peptidase
hg19_v2_chr1_+_179851823_179851846	0.00371053	FOXA3_FOXC2	ENST00000435319.4|TOR1AIP1|ENSG00000143337.14|torsin A interacting protein 1
hg19_v2_chr5_+_95998746_95998764	0.00370059	FOXA3_FOXC2	ENST00000508608.1|CAST|ENSG00000153113.19|calpastatin
hg19_v2_chr7_+_106505912_106505931	0.00354599	FOXA3_FOXC2	ENST00000359195.3|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
hg19_v2_chr4_+_165675269_165675289	0.00340699	FOXA3_FOXC2	ENST00000507311.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr15_+_58430567_58430589	0.00331778	FOXA3_FOXC2	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr17_-_39183452_39183468	0.00324983	FOXA3_FOXC2	ENST00000361883.5|KRTAP1-5|ENSG00000221852.4|keratin associated protein 1-5
hg19_v2_chr10_+_124320156_124320181	0.00323542	FOXA3_FOXC2	ENST00000338354.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000344338.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000330163.4|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368909.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368955.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368956.2|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr9_-_110251836_110251927	0.00318516	FOXA3_FOXC2	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr7_-_107643567_107643657	0.00318462	FOXA3_FOXC2	ENST00000393559.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000439976.1|LAMB1|ENSG00000091136.9|laminin, beta 1 	ENST00000393560.1|LAMB1|ENSG00000091136.9|laminin, beta 1
hg19_v2_chr17_-_66951474_66951550	0.00309974	FOXA3_FOXC2	ENST00000269080.2|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chr9_-_20382446_20382493	0.00306164	FOXA3_FOXC2	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr14_+_23654525_23654545	0.00297397	FOXA3_FOXC2	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr4_-_186682716_186682745	0.00296521	FOXA3_FOXC2	ENST00000445343.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chrX_+_47863734_47863734	0.0026455	FOXA3_FOXC2	ENST00000304355.5|SPACA5|ENSG00000171489.6|sperm acrosome associated 5
hg19_v2_chr12_-_11139511_11139511	0.00258817	FOXA3_FOXC2	ENST00000506868.1|TAS2R50|ENSG00000212126.3|taste receptor, type 2, member 50
hg19_v2_chr10_+_124739911_124739957	0.00258695	FOXA3_FOXC2	ENST00000405485.1|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chrX_-_20237059_20237081	0.00246961	FOXA3_FOXC2	ENST00000457145.1|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr13_+_73629107_73629148	0.0023944	FOXA3_FOXC2	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr2_-_175260368_175260450	0.00236248	FOXA3_FOXC2	ENST00000342016.3|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1 	ENST00000362053.5|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1
hg19_v2_chr14_+_56127960_56127979	0.00233424	FOXA3_FOXC2	ENST00000553624.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr17_+_7487146_7487211	0.0022785	FOXA3_FOXC2	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr16_+_67381289_67381306	0.00186925	FOXA3_FOXC2	ENST00000435835.3|LRRC36|ENSG00000159708.13|leucine rich repeat containing 36
hg19_v2_chr12_+_93096759_93096804	0.00182867	FOXA3_FOXC2	ENST00000544406.2|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr1_-_169555779_169555826	0.00153411	FOXA3_FOXC2	ENST00000367797.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor) 	ENST00000367796.3|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr1_+_114471972_114472000	0.00153299	FOXA3_FOXC2	ENST00000369559.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369554.2|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr1_-_169555709_169555730	0.00133032	FOXA3_FOXC2	ENST00000546081.1|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr4_+_187148556_187148687	0.00129611	FOXA3_FOXC2	ENST00000264690.6|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000446598.2|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000414291.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1 	ENST00000513864.1|KLKB1|ENSG00000164344.11|kallikrein B, plasma (Fletcher factor) 1
hg19_v2_chr16_+_4666475_4666516	0.00103529	FOXA3_FOXC2	ENST00000591895.1|MGRN1|ENSG00000102858.8|mahogunin ring finger 1, E3 ubiquitin protein ligase
hg19_v2_chr6_+_146350267_146350419	0.00102665	FOXA3_FOXC2	ENST00000355289.4|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1 	ENST00000282753.1|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1
hg19_v2_chr5_+_140787600_140787770	0.000991357	FOXA3_FOXC2	ENST00000520790.1|PCDHGB6|ENSG00000253305.1|protocadherin gamma subfamily B, 6
hg19_v2_chr1_+_40862501_40862512	0.000800165	FOXA3_FOXC2	ENST00000539317.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr19_-_50380536_50380618	0.000766296	FOXA3_FOXC2	ENST00000391832.3|AKT1S1|ENSG00000204673.6|AKT1 substrate 1 (proline-rich) 	ENST00000391834.2|AKT1S1|ENSG00000204673.6|AKT1 substrate 1 (proline-rich) 	ENST00000344175.5|AKT1S1|ENSG00000204673.6|AKT1 substrate 1 (proline-rich)
hg19_v2_chr18_-_3874752_3874767	0.00071761	FOXA3_FOXC2	ENST00000534970.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr9_-_37034028_37034157	0.000716157	FOXA3_FOXC2	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr17_-_38020379_38020390	0.000672163	FOXA3_FOXC2	ENST00000351680.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000346243.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000350532.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000467757.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439016.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr15_+_80364901_80364932	0.000456739	FOXA3_FOXC2	ENST00000560228.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559835.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000559775.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558688.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560392.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000560976.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558272.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000558390.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr8_+_19171128_19171182	0.00035773	FOXA3_FOXC2	ENST00000265807.3|SH2D4A|ENSG00000104611.7|SH2 domain containing 4A
hg19_v2_chr1_+_66820058_66820083	0.00027079	FOXA3_FOXC2	ENST00000480109.2|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr12_-_71551652_71551679	0.000246363	FOXA3_FOXC2	ENST00000546561.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr6_+_47666275_47666296	5.90279e-05	FOXA3_FOXC2	ENST00000327753.3|GPR115|ENSG00000153294.7|G protein-coupled receptor 115 	ENST00000283303.2|GPR115|ENSG00000153294.7|G protein-coupled receptor 115
