hg19_v2_chr6_-_72129806_72129970	0.73221	FOXA2_FOXJ3	ENST00000413945.1|LINC00472|ENSG00000233237.2|long intergenic non-protein coding RNA 472 	ENST00000602878.1|LINC00472|ENSG00000233237.2|long intergenic non-protein coding RNA 472 	ENST00000436803.1|LINC00472|ENSG00000233237.2|long intergenic non-protein coding RNA 472 	ENST00000421704.1|LINC00472|ENSG00000233237.2|long intergenic non-protein coding RNA 472 	ENST00000441570.1|LINC00472|ENSG00000233237.2|long intergenic non-protein coding RNA 472
hg19_v2_chr2_+_58655461_58655492	0.568428	FOXA2_FOXJ3	ENST00000429095.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000429664.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000452840.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr10_-_4285835_4285904	0.538358	FOXA2_FOXJ3	ENST00000454470.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr6_-_152623231_152623294	0.516188	FOXA2_FOXJ3	ENST00000540663.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000537033.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr1_-_246729544_246729626	0.340053	FOXA2_FOXJ3	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr12_-_12714006_12714021	0.326686	FOXA2_FOXJ3	ENST00000541207.1|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr16_+_28857916_28857952	0.318821	FOXA2_FOXJ3	ENST00000563591.1|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr5_+_61708488_61708578	0.306155	FOXA2_FOXJ3	ENST00000505902.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr12_-_15038779_15038860	0.291295	FOXA2_FOXJ3	ENST00000228938.5|MGP|ENSG00000111341.5|matrix Gla protein 	ENST00000539261.1|MGP|ENSG00000111341.5|matrix Gla protein
hg19_v2_chr6_+_122793058_122793087	0.272724	FOXA2_FOXJ3	ENST00000392491.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr10_-_4285923_4286104	0.271159	FOXA2_FOXJ3	ENST00000418372.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702 	ENST00000608792.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr12_-_106480587_106480734	0.256773	FOXA2_FOXJ3	ENST00000548902.1|NUAK1|ENSG00000074590.9|NUAK family, SNF1-like kinase, 1
hg19_v2_chr6_+_161123270_161123278	0.250917	FOXA2_FOXJ3	ENST00000366924.2|PLG|ENSG00000122194.14|plasminogen 	ENST00000308192.9|PLG|ENSG00000122194.14|plasminogen 	ENST00000418964.1|PLG|ENSG00000122194.14|plasminogen
hg19_v2_chr12_-_12714025_12714064	0.24265	FOXA2_FOXJ3	ENST00000539940.1|DUSP16|ENSG00000111266.4|dual specificity phosphatase 16
hg19_v2_chr12_-_92539614_92539673	0.242636	FOXA2_FOXJ3	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr1_-_161193349_161193424	0.239434	FOXA2_FOXJ3	ENST00000469730.2|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000463273.1|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000464492.1|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000367990.3|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000470459.2|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000468465.1|APOA2|ENSG00000158874.7|apolipoprotein A-II 	ENST00000463812.1|APOA2|ENSG00000158874.7|apolipoprotein A-II
hg19_v2_chr17_-_57229155_57229198	0.236836	FOXA2_FOXJ3	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr6_+_26217159_26217170	0.236013	FOXA2_FOXJ3	ENST00000303910.2|HIST1H2AE|ENSG00000168274.3|histone cluster 1, H2ae
hg19_v2_chr19_+_782755_782833	0.235876	FOXA2_FOXJ3	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr2_+_88047606_88047606	0.233099	FOXA2_FOXJ3	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr3_-_48956818_48956818	0.229571	FOXA2_FOXJ3	ENST00000408959.2|ARIH2OS|ENSG00000221883.2|ariadne homolog 2 opposite strand
hg19_v2_chr19_+_16607122_16607274	0.228234	FOXA2_FOXJ3	ENST00000221671.3|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594035.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000599550.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594813.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44
hg19_v2_chr17_+_67590125_67590147	0.227846	FOXA2_FOXJ3	ENST00000591334.1|AC003051.1|ENSG00000227517.2|AC003051.1
hg19_v2_chr12_+_57998400_57998422	0.227129	FOXA2_FOXJ3	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr2_+_162165038_162165111	0.202345	FOXA2_FOXJ3	ENST00000437630.1|PSMD14|ENSG00000115233.7|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14
hg19_v2_chr18_+_68002675_68002675	0.199798	FOXA2_FOXJ3	ENST00000584919.1|RP11-41O4.1|ENSG00000266258.1|Uncharacterized protein
hg19_v2_chrX_+_9431324_9431371	0.196249	FOXA2_FOXJ3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr4_+_104346194_104346216	0.195123	FOXA2_FOXJ3	ENST00000510200.1|RP11-328K4.1|ENSG00000248740.1|RP11-328K4.1
hg19_v2_chr16_-_21442874_21442874	0.192364	FOXA2_FOXJ3	ENST00000534903.1|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr1_+_92545862_92545917	0.191031	FOXA2_FOXJ3	ENST00000370382.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8 	ENST00000342818.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8
hg19_v2_chr19_-_8373173_8373263	0.189657	FOXA2_FOXJ3	ENST00000537716.2|CD320|ENSG00000167775.6|CD320 molecule 	ENST00000301458.5|CD320|ENSG00000167775.6|CD320 molecule
hg19_v2_chr12_+_59989918_59989965	0.189164	FOXA2_FOXJ3	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr3_-_135916073_135916096	0.18605	FOXA2_FOXJ3	ENST00000481989.1|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr10_+_33271469_33271479	0.185985	FOXA2_FOXJ3	ENST00000414157.1|RP11-462L8.1|ENSG00000229656.2|RP11-462L8.1
hg19_v2_chr2_+_66918558_66918580	0.184206	FOXA2_FOXJ3	ENST00000435389.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000428590.1|AC007392.3|ENSG00000232046.2|AC007392.3	ENST00000412944.1|AC007392.3|ENSG00000232046.2|AC007392.3
hg19_v2_chr12_+_28605426_28605475	0.184191	FOXA2_FOXJ3	ENST00000542801.1|CCDC91|ENSG00000123106.6|coiled-coil domain containing 91
hg19_v2_chr2_+_143635222_143635240	0.174107	FOXA2_FOXJ3	ENST00000375773.2|KYNU|ENSG00000115919.10|kynureninase 	ENST00000409512.1|KYNU|ENSG00000115919.10|kynureninase 	ENST00000410015.2|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr17_+_41561317_41561508	0.162494	FOXA2_FOXJ3	ENST00000540306.1|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8 	ENST00000262415.3|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8 	ENST00000605777.1|DHX8|ENSG00000067596.6|DEAH (Asp-Glu-Ala-His) box polypeptide 8
hg19_v2_chr17_-_6915616_6915636	0.156214	FOXA2_FOXJ3	ENST00000575889.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein
hg19_v2_chr5_-_150460539_150460640	0.156006	FOXA2_FOXJ3	ENST00000520931.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000520695.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000521591.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1 	ENST00000518977.1|TNIP1|ENSG00000145901.10|TNFAIP3 interacting protein 1
hg19_v2_chr1_-_114430169_114430195	0.152677	FOXA2_FOXJ3	ENST00000393316.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr2_+_143635067_143635211	0.151431	FOXA2_FOXJ3	ENST00000264170.4|KYNU|ENSG00000115919.10|kynureninase
hg19_v2_chr1_-_207095324_207095357	0.150899	FOXA2_FOXJ3	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr1_+_66796401_66796423	0.150411	FOXA2_FOXJ3	ENST00000528771.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr1_+_150122034_150122170	0.148922	FOXA2_FOXJ3	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr8_+_103540983_103541059	0.145204	FOXA2_FOXJ3	ENST00000523572.1|KB-1980E6.3|ENSG00000253633.1|Uncharacterized protein
hg19_v2_chr16_-_88772670_88772702	0.139952	FOXA2_FOXJ3	ENST00000562544.1|RNF166|ENSG00000158717.6|ring finger protein 166
hg19_v2_chr1_-_203273676_203273784	0.134052	FOXA2_FOXJ3	ENST00000425698.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chr17_-_26662440_26662463	0.133177	FOXA2_FOXJ3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr19_-_52307357_52307368	0.132452	FOXA2_FOXJ3	ENST00000594900.1|FPR1|ENSG00000171051.4|formyl peptide receptor 1
hg19_v2_chr5_+_136070614_136070625	0.130669	FOXA2_FOXJ3	ENST00000502421.1|CTB-1I21.1|ENSG00000250284.1|CTB-1I21.1
hg19_v2_chr12_+_49297899_49297955	0.130185	FOXA2_FOXJ3	ENST00000552942.1|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65 	ENST00000320516.4|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr4_+_154622652_154622652	0.126441	FOXA2_FOXJ3	ENST00000260010.6|TLR2|ENSG00000137462.6|toll-like receptor 2
hg19_v2_chr17_+_26662679_26662720	0.125601	FOXA2_FOXJ3	ENST00000578158.1|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr5_-_115872124_115872139	0.125375	FOXA2_FOXJ3	ENST00000515009.1|SEMA6A|ENSG00000092421.12|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
hg19_v2_chr12_-_7596735_7596781	0.124793	FOXA2_FOXJ3	ENST00000416109.2|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000396630.1|CD163L1|ENSG00000177675.4|CD163 molecule-like 1 	ENST00000313599.3|CD163L1|ENSG00000177675.4|CD163 molecule-like 1
hg19_v2_chr15_+_90735145_90735166	0.121122	FOXA2_FOXJ3	ENST00000559792.1|SEMA4B|ENSG00000185033.10|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
hg19_v2_chr15_+_64680003_64680063	0.120473	FOXA2_FOXJ3	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr3_+_171561127_171561306	0.119705	FOXA2_FOXJ3	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr16_+_22517166_22517166	0.11862	FOXA2_FOXJ3	ENST00000356156.3|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr2_+_162272605_162272753	0.115857	FOXA2_FOXJ3	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr13_-_99910673_99910682	0.115339	FOXA2_FOXJ3	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr2_+_12857043_12857127	0.114357	FOXA2_FOXJ3	ENST00000381465.2|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr1_-_43855444_43855478	0.111891	FOXA2_FOXJ3	ENST00000372455.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr6_-_26216872_26216895	0.111401	FOXA2_FOXJ3	ENST00000244601.3|HIST1H2BG|ENSG00000187990.4|histone cluster 1, H2bg
hg19_v2_chr8_+_67104323_67104350	0.108926	FOXA2_FOXJ3	ENST00000518412.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000518035.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000517725.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967
hg19_v2_chr7_+_106809406_106809460	0.108788	FOXA2_FOXJ3	ENST00000468410.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000478930.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000464009.1|HBP1|ENSG00000105856.9|HMG-box transcription factor 1 	ENST00000222574.4|HBP1|ENSG00000105856.9|HMG-box transcription factor 1
hg19_v2_chr4_+_117220016_117220016	0.107724	FOXA2_FOXJ3	ENST00000604093.1|MTRNR2L13|ENSG00000270394.1|MT-RNR2-like 13 (pseudogene)
hg19_v2_chr19_+_36132631_36132695	0.107306	FOXA2_FOXJ3	ENST00000379026.2|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000379023.4|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000402764.2|ETV2|ENSG00000105672.10|ets variant 2 	ENST00000479824.1|ETV2|ENSG00000105672.10|ets variant 2
hg19_v2_chr7_+_76107444_76107444	0.106343	FOXA2_FOXJ3	ENST00000435861.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr15_-_40398812_40398846	0.104578	FOXA2_FOXJ3	ENST00000561360.1|BMF|ENSG00000104081.9|Bcl2 modifying factor
hg19_v2_chr1_-_89736434_89736546	0.103852	FOXA2_FOXJ3	ENST00000370459.3|GBP5|ENSG00000154451.10|guanylate binding protein 5
hg19_v2_chr11_+_65851443_65851457	0.103029	FOXA2_FOXJ3	ENST00000533756.1|PACS1|ENSG00000175115.7|phosphofurin acidic cluster sorting protein 1
hg19_v2_chr7_+_76090993_76091044	0.100809	FOXA2_FOXJ3	ENST00000425780.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000456590.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000451769.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000324432.5|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000307569.8|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000457529.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000446600.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000413936.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000423646.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000438930.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila) 	ENST00000430490.2|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr15_+_90792760_90792767	0.100653	FOXA2_FOXJ3	ENST00000339615.5|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13 	ENST00000438251.1|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13
hg19_v2_chr20_+_44035847_44035879	0.0995193	FOXA2_FOXJ3	ENST00000372712.2|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr12_-_49582978_49583107	0.0983971	FOXA2_FOXJ3	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr10_+_78078088_78078092	0.0972731	FOXA2_FOXJ3	ENST00000496424.2|C10orf11|ENSG00000148655.10|chromosome 10 open reading frame 11
hg19_v2_chr14_+_58894404_58894456	0.0965667	FOXA2_FOXJ3	ENST00000554463.1|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000555833.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr6_-_2751146_2751200	0.0963459	FOXA2_FOXJ3	ENST00000268446.5|MYLK4|ENSG00000145949.8|myosin light chain kinase family, member 4 	ENST00000274643.7|MYLK4|ENSG00000145949.8|myosin light chain kinase family, member 4
hg19_v2_chr7_-_139876734_139876764	0.0938627	FOXA2_FOXJ3	ENST00000006967.5|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr1_+_203765437_203765437	0.0929989	FOXA2_FOXJ3	ENST00000550078.1|ZBED6|ENSG00000257315.1|zinc finger, BED-type containing 6
hg19_v2_chr1_-_3566627_3566676	0.0928917	FOXA2_FOXJ3	ENST00000419924.2|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73 	ENST00000270708.7|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73
hg19_v2_chr11_-_92930556_92930621	0.0920539	FOXA2_FOXJ3	ENST00000529184.1|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr16_+_22518495_22518495	0.0913275	FOXA2_FOXJ3	ENST00000541154.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr6_-_117747015_117747048	0.0910754	FOXA2_FOXJ3	ENST00000368508.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase 	ENST00000368507.3|ROS1|ENSG00000047936.6|c-ros oncogene 1 , receptor tyrosine kinase
hg19_v2_chr4_-_80994619_80994633	0.0907261	FOXA2_FOXJ3	ENST00000404191.1|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr3_-_169487617_169487683	0.0885654	FOXA2_FOXJ3	ENST00000330368.2|ACTRT3|ENSG00000184378.2|actin-related protein T3
hg19_v2_chr17_+_26662730_26662844	0.0881358	FOXA2_FOXJ3	ENST00000226225.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr9_-_20382446_20382493	0.0879245	FOXA2_FOXJ3	ENST00000380321.1|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr14_+_102276192_102276208	0.0879212	FOXA2_FOXJ3	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr14_+_100070869_100070893	0.0875656	FOXA2_FOXJ3	ENST00000502101.2|RP11-543C4.1|ENSG00000247970.2|RP11-543C4.1
hg19_v2_chr17_-_65235916_65235949	0.0871305	FOXA2_FOXJ3	ENST00000579861.1|HELZ|ENSG00000198265.7|helicase with zinc finger
hg19_v2_chr11_-_7904464_7904511	0.0863594	FOXA2_FOXJ3	ENST00000502624.2|RP11-35J10.5|ENSG00000271758.1|RP11-35J10.5	ENST00000527565.1|RP11-35J10.5|ENSG00000271758.1|RP11-35J10.5
hg19_v2_chr7_+_6617039_6617136	0.0859129	FOXA2_FOXJ3	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chr16_-_28857677_28857729	0.0852377	FOXA2_FOXJ3	ENST00000313511.3|TUFM|ENSG00000178952.4|Tu translation elongation factor, mitochondrial
hg19_v2_chr1_-_114429997_114430077	0.084891	FOXA2_FOXJ3	ENST00000471267.1|BCL2L15|ENSG00000188761.7|BCL2-like 15 	ENST00000393320.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr8_+_21777159_21777221	0.0845162	FOXA2_FOXJ3	ENST00000434536.1|XPO7|ENSG00000130227.12|exportin 7 	ENST00000252512.9|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr19_+_3880581_3880692	0.0844662	FOXA2_FOXJ3	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr9_-_86432547_86432699	0.0843523	FOXA2_FOXJ3	ENST00000376365.3|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1 	ENST00000376371.2|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1
hg19_v2_chr9_+_112852477_112852514	0.0836835	FOXA2_FOXJ3	ENST00000480388.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr8_+_75512010_75512101	0.0835027	FOXA2_FOXJ3	ENST00000518190.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein  	ENST00000523118.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein
hg19_v2_chr19_+_12721760_12721778	0.0810146	FOXA2_FOXJ3	ENST00000600752.1|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000540038.1|ZNF791|ENSG00000173875.9|zinc finger protein 791
hg19_v2_chr17_+_41363854_41363916	0.080813	FOXA2_FOXJ3	ENST00000588693.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000588659.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000541594.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000536052.1|TMEM106A|ENSG00000184988.4|transmembrane protein 106A 	ENST00000331615.3|TMEM106A|ENSG00000184988.4|transmembrane protein 106A
hg19_v2_chr21_-_16374688_16374703	0.0803571	FOXA2_FOXJ3	ENST00000411932.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr5_-_13944652_13944652	0.0799162	FOXA2_FOXJ3	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr11_-_102651343_102651365	0.0796771	FOXA2_FOXJ3	ENST00000279441.4|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2) 	ENST00000539681.1|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2)
hg19_v2_chr1_-_207095212_207095278	0.0796354	FOXA2_FOXJ3	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr6_+_12958137_12958234	0.0789612	FOXA2_FOXJ3	ENST00000457702.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379345.2|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr8_-_101321584_101321754	0.0785654	FOXA2_FOXJ3	ENST00000523167.1|RNF19A|ENSG00000034677.7|ring finger protein 19A, RBR E3 ubiquitin protein ligase
hg19_v2_chr17_-_30228678_30228784	0.0771148	FOXA2_FOXJ3	ENST00000261708.4|UTP6|ENSG00000108651.5|UTP6, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr10_-_69597828_69597854	0.076947	FOXA2_FOXJ3	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr17_+_7942424_7942474	0.0765915	FOXA2_FOXJ3	ENST00000573359.1|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B
hg19_v2_chr19_+_35899569_35899727	0.0759321	FOXA2_FOXJ3	ENST00000600405.1|AC002511.1|ENSG00000205786.4|AC002511.1
hg19_v2_chr11_+_34643600_34643750	0.0755566	FOXA2_FOXJ3	ENST00000530286.1|EHF|ENSG00000135373.8|ets homologous factor 	ENST00000533754.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr17_-_71223839_71223887	0.0749883	FOXA2_FOXJ3	ENST00000579872.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A 	ENST00000580032.1|FAM104A|ENSG00000133193.8|family with sequence similarity 104, member A
hg19_v2_chr7_-_16840820_16841011	0.0749783	FOXA2_FOXJ3	ENST00000450569.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr9_-_136933615_136933682	0.0749544	FOXA2_FOXJ3	ENST00000371834.2|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr12_+_120740119_120740124	0.0738175	FOXA2_FOXJ3	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr16_+_22516172_22516172	0.0733926	FOXA2_FOXJ3	ENST00000543407.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr17_+_685513_685621	0.0731296	FOXA2_FOXJ3	ENST00000304478.4|RNMTL1|ENSG00000171861.6|RNA methyltransferase like 1
hg19_v2_chr10_+_124739911_124739957	0.0730986	FOXA2_FOXJ3	ENST00000405485.1|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr5_-_96209315_96209315	0.0729984	FOXA2_FOXJ3	ENST00000504056.1|CTD-2260A17.2|ENSG00000247121.2|Uncharacterized protein
hg19_v2_chr22_-_22295029_22295062	0.0729426	FOXA2_FOXJ3	ENST00000445205.1|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr4_+_28437071_28437209	0.0722025	FOXA2_FOXJ3	ENST00000509416.1|RP11-123O22.1|ENSG00000250064.1|RP11-123O22.1
hg19_v2_chr21_+_34602377_34602487	0.0719361	FOXA2_FOXJ3	ENST00000342101.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000413881.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000443073.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr12_-_76879852_76879888	0.071864	FOXA2_FOXJ3	ENST00000548341.1|OSBPL8|ENSG00000091039.12|oxysterol binding protein-like 8
hg19_v2_chr3_+_142315294_142315315	0.0717525	FOXA2_FOXJ3	ENST00000464320.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr2_+_171640291_171640311	0.0703164	FOXA2_FOXJ3	ENST00000409885.1|ERICH2|ENSG00000204334.7|glutamate-rich 2
hg19_v2_chr17_-_72772425_72772445	0.0702879	FOXA2_FOXJ3	ENST00000578822.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr21_-_46293644_46293752	0.0698201	FOXA2_FOXJ3	ENST00000330938.3|PTTG1IP|ENSG00000183255.7|pituitary tumor-transforming 1 interacting protein
hg19_v2_chr5_+_147774275_147774340	0.069296	FOXA2_FOXJ3	ENST00000513826.1|FBXO38|ENSG00000145868.12|F-box protein 38
hg19_v2_chr5_+_137673945_137673961	0.0691059	FOXA2_FOXJ3	ENST00000513056.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C 	ENST00000511276.1|FAM53C|ENSG00000120709.6|family with sequence similarity 53, member C
hg19_v2_chr16_-_279405_279462	0.0688689	FOXA2_FOXJ3	ENST00000430864.1|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000293872.8|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000337351.4|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000397783.1|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae)
hg19_v2_chr2_+_149402989_149402989	0.0685004	FOXA2_FOXJ3	ENST00000397424.2|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr6_-_88032795_88032795	0.0682163	FOXA2_FOXJ3	ENST00000296882.3|GJB7|ENSG00000164411.6|gap junction protein, beta 7, 25kDa
hg19_v2_chr17_-_6915646_6915673	0.0679302	FOXA2_FOXJ3	ENST00000574377.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399541.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399540.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000575727.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000573939.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein
hg19_v2_chrX_-_65259914_65259967	0.0678561	FOXA2_FOXJ3	ENST00000374737.4|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4 	ENST00000455586.2|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4
hg19_v2_chr3_+_172468749_172468821	0.0674275	FOXA2_FOXJ3	ENST00000366254.2|ECT2|ENSG00000114346.9|epithelial cell transforming sequence 2 oncogene 	ENST00000415665.1|ECT2|ENSG00000114346.9|epithelial cell transforming sequence 2 oncogene 	ENST00000438041.1|ECT2|ENSG00000114346.9|epithelial cell transforming sequence 2 oncogene
hg19_v2_chr14_+_102606181_102606261	0.0663904	FOXA2_FOXJ3	ENST00000335263.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000322340.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000424963.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000342702.3|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556807.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000499851.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000558567.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000299135.6|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000454394.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556511.2|WDR20|ENSG00000140153.13|WD repeat domain 20
hg19_v2_chr17_-_72772462_72772511	0.0660335	FOXA2_FOXJ3	ENST00000582870.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000581136.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000357814.3|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000579218.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583476.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000580301.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000583757.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative) 	ENST00000582524.1|NAT9|ENSG00000109065.7|N-acetyltransferase 9 (GCN5-related, putative)
hg19_v2_chr3_+_109128961_109129009	0.065989	FOXA2_FOXJ3	ENST00000489670.1|RP11-702L6.4|ENSG00000228980.3|RP11-702L6.4
hg19_v2_chr12_+_2986359_2986421	0.0651115	FOXA2_FOXJ3	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr8_+_86999516_86999552	0.0649073	FOXA2_FOXJ3	ENST00000521564.1|ATP6V0D2|ENSG00000147614.3|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2
hg19_v2_chr1_+_45140360_45140399	0.0648706	FOXA2_FOXJ3	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr14_+_97263641_97263764	0.0646079	FOXA2_FOXJ3	ENST00000216639.3|VRK1|ENSG00000100749.3|vaccinia related kinase 1
hg19_v2_chr8_+_103991013_103991127	0.0645741	FOXA2_FOXJ3	ENST00000517983.1|KB-1507C5.4|ENSG00000254281.1|KB-1507C5.4
hg19_v2_chr2_+_191513959_191514047	0.0644968	FOXA2_FOXJ3	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr12_+_97306295_97306354	0.0639114	FOXA2_FOXJ3	ENST00000457368.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1
hg19_v2_chr9_-_35812140_35812191	0.0637695	FOXA2_FOXJ3	ENST00000497810.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000396638.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8 	ENST00000484764.1|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr17_+_77030267_77030391	0.0637467	FOXA2_FOXJ3	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr19_-_42931567_42931581	0.0637218	FOXA2_FOXJ3	ENST00000244289.4|LIPE|ENSG00000079435.5|lipase, hormone-sensitive
hg19_v2_chr17_+_26662597_26662628	0.0632821	FOXA2_FOXJ3	ENST00000544907.2|TNFAIP1|ENSG00000109079.5|tumor necrosis factor, alpha-induced protein 1 (endothelial)
hg19_v2_chr4_-_21950356_21950439	0.0630398	FOXA2_FOXJ3	ENST00000447367.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4 	ENST00000382152.2|KCNIP4|ENSG00000185774.10|Kv channel interacting protein 4
hg19_v2_chr19_+_6464243_6464325	0.0624551	FOXA2_FOXJ3	ENST00000600229.1|CRB3|ENSG00000130545.11|crumbs homolog 3 (Drosophila) 	ENST00000356762.3|CRB3|ENSG00000130545.11|crumbs homolog 3 (Drosophila)
hg19_v2_chr10_+_97759848_97759883	0.0624233	FOXA2_FOXJ3	ENST00000424464.1|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000410012.2|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000344386.3|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B
hg19_v2_chr19_-_4831701_4831761	0.0623362	FOXA2_FOXJ3	ENST00000248244.5|TICAM1|ENSG00000127666.8|toll-like receptor adaptor molecule 1
hg19_v2_chr5_+_176853669_176853701	0.0622804	FOXA2_FOXJ3	ENST00000355472.5|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6
hg19_v2_chr8_+_11666649_11666765	0.0620301	FOXA2_FOXJ3	ENST00000528643.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1 	ENST00000525777.1|FDFT1|ENSG00000079459.8|farnesyl-diphosphate farnesyltransferase 1
hg19_v2_chr8_-_33424636_33424653	0.0618524	FOXA2_FOXJ3	ENST00000256257.1|RNF122|ENSG00000133874.1|ring finger protein 122
hg19_v2_chr19_+_36486078_36486123	0.060961	FOXA2_FOXJ3	ENST00000378887.2|SDHAF1|ENSG00000205138.2|succinate dehydrogenase complex assembly factor 1
hg19_v2_chr14_-_74551172_74551196	0.0608756	FOXA2_FOXJ3	ENST00000553458.1|ALDH6A1|ENSG00000119711.8|aldehyde dehydrogenase 6 family, member A1
hg19_v2_chr5_-_98262240_98262240	0.0606094	FOXA2_FOXJ3	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr1_+_41448820_41448833	0.0603028	FOXA2_FOXJ3	ENST00000372616.1|CTPS1|ENSG00000171793.9|CTP synthase 1
hg19_v2_chr1_+_246729815_246729841	0.0601405	FOXA2_FOXJ3	ENST00000366511.1|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr16_+_30064411_30064428	0.0597726	FOXA2_FOXJ3	ENST00000338110.5|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr8_+_101349823_101349862	0.0596028	FOXA2_FOXJ3	ENST00000519566.1|KB-1991G8.1|ENSG00000253217.1|KB-1991G8.1
hg19_v2_chr15_+_35270552_35270552	0.0588234	FOXA2_FOXJ3	ENST00000391457.2|AC114546.1|ENSG00000212768.2|HCG37415; PRO1914; Uncharacterized protein
hg19_v2_chr1_+_163039143_163039159	0.0587356	FOXA2_FOXJ3	ENST00000531057.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000527809.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000367908.4|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4
hg19_v2_chr16_+_30064444_30064528	0.0584339	FOXA2_FOXJ3	ENST00000395248.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000566897.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000568435.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr3_-_156272872_156272923	0.0584161	FOXA2_FOXJ3	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr4_+_86748898_86748936	0.0582162	FOXA2_FOXJ3	ENST00000509300.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr16_+_84801852_84801877	0.0580036	FOXA2_FOXJ3	ENST00000569925.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000567526.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10
hg19_v2_chr8_+_67344710_67344750	0.0579644	FOXA2_FOXJ3	ENST00000379385.4|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000396623.3|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1 	ENST00000415254.1|ADHFE1|ENSG00000147576.11|alcohol dehydrogenase, iron containing, 1
hg19_v2_chr7_+_90338547_90338586	0.0576714	FOXA2_FOXJ3	ENST00000446790.1|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr6_+_26251835_26251879	0.0574389	FOXA2_FOXJ3	ENST00000356350.2|HIST1H2BH|ENSG00000197459.2|histone cluster 1, H2bh
hg19_v2_chr6_-_131211534_131211564	0.057186	FOXA2_FOXJ3	ENST00000456097.2|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr14_-_60632162_60632211	0.0564527	FOXA2_FOXJ3	ENST00000557185.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr19_+_18111927_18111988	0.0564347	FOXA2_FOXJ3	ENST00000379656.3|ARRDC2|ENSG00000105643.5|arrestin domain containing 2
hg19_v2_chr4_-_80994471_80994485	0.056254	FOXA2_FOXJ3	ENST00000295465.4|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr19_+_15160130_15160195	0.0560838	FOXA2_FOXJ3	ENST00000427043.3|CASP14|ENSG00000105141.4|caspase 14, apoptosis-related cysteine peptidase
hg19_v2_chr3_-_187455680_187455732	0.0558413	FOXA2_FOXJ3	ENST00000438077.1|BCL6|ENSG00000113916.13|B-cell CLL/lymphoma 6
hg19_v2_chr11_-_61647935_61648020	0.0552551	FOXA2_FOXJ3	ENST00000531956.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3
hg19_v2_chr21_+_34602200_34602298	0.055207	FOXA2_FOXJ3	ENST00000382264.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000382241.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000404220.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000342136.4|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr5_+_179135246_179135327	0.0550318	FOXA2_FOXJ3	ENST00000508787.1|CANX|ENSG00000127022.10|calnexin
hg19_v2_chr10_+_90521163_90521163	0.0545831	FOXA2_FOXJ3	ENST00000404459.1|LIPN|ENSG00000204020.5|lipase, family member N
hg19_v2_chr1_+_241695670_241695705	0.0545121	FOXA2_FOXJ3	ENST00000366557.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr7_+_74191613_74191613	0.0544394	FOXA2_FOXJ3	ENST00000442021.2|NCF1|ENSG00000158517.9|neutrophil cytosolic factor 1
hg19_v2_chr19_+_43325937_43326015	0.054267	FOXA2_FOXJ3	ENST00000425668.1|AC004603.4|ENSG00000225877.1|AC004603.4
hg19_v2_chr5_-_88119580_88119605	0.0541594	FOXA2_FOXJ3	ENST00000539796.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr7_+_26332645_26332674	0.0540396	FOXA2_FOXJ3	ENST00000396376.1|SNX10|ENSG00000086300.11|sorting nexin 10
hg19_v2_chr8_-_93978309_93978331	0.0530879	FOXA2_FOXJ3	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr15_-_43559055_43559131	0.0529766	FOXA2_FOXJ3	ENST00000220420.5|TGM5|ENSG00000104055.10|transglutaminase 5 	ENST00000349114.4|TGM5|ENSG00000104055.10|transglutaminase 5
hg19_v2_chr10_-_101825151_101825200	0.0526788	FOXA2_FOXJ3	ENST00000441382.1|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chr2_-_240230890_240230920	0.0524662	FOXA2_FOXJ3	ENST00000446876.1|HDAC4|ENSG00000068024.12|histone deacetylase 4
hg19_v2_chr14_-_58893832_58893865	0.0522076	FOXA2_FOXJ3	ENST00000556007.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr15_+_84906338_84906338	0.0520008	FOXA2_FOXJ3	ENST00000512109.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr12_-_75905374_75905420	0.0518792	FOXA2_FOXJ3	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr9_-_35812236_35812274	0.051698	FOXA2_FOXJ3	ENST00000340291.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr22_-_22337154_22337194	0.0508589	FOXA2_FOXJ3	ENST00000413067.2|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000437929.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000456075.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000434517.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000424393.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000449704.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000437103.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta
hg19_v2_chr4_-_142199943_142199958	0.0507405	FOXA2_FOXJ3	ENST00000514347.1|RP11-586L23.1|ENSG00000248747.1|RP11-586L23.1
hg19_v2_chr4_+_146403912_146403972	0.0503817	FOXA2_FOXJ3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr8_-_30002179_30002202	0.0501146	FOXA2_FOXJ3	ENST00000320542.3|MBOAT4|ENSG00000177669.3|membrane bound O-acyltransferase domain containing 4
hg19_v2_chr12_+_112191694_112191694	0.0500894	FOXA2_FOXJ3	ENST00000546840.2|RP11-162P23.2|ENSG00000257767.2|RP11-162P23.2
hg19_v2_chr6_+_26501449_26501449	0.0497706	FOXA2_FOXJ3	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chr17_+_7942335_7942385	0.0495986	FOXA2_FOXJ3	ENST00000380183.4|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000572022.1|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B 	ENST00000380173.2|ALOX15B|ENSG00000179593.11|arachidonate 15-lipoxygenase, type B
hg19_v2_chrX_+_47863734_47863734	0.0492455	FOXA2_FOXJ3	ENST00000304355.5|SPACA5|ENSG00000171489.6|sperm acrosome associated 5
hg19_v2_chr6_-_135818368_135818386	0.0490167	FOXA2_FOXJ3	ENST00000367798.2|AHI1|ENSG00000135541.16|Abelson helper integration site 1
hg19_v2_chr2_-_191878874_191878976	0.0488938	FOXA2_FOXJ3	ENST00000392322.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000392323.2|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000424722.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000361099.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr6_-_32160622_32160719	0.0485275	FOXA2_FOXJ3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chrX_+_56644819_56644825	0.048492	FOXA2_FOXJ3	ENST00000446028.1|RP11-431N15.2|ENSG00000230105.1|RP11-431N15.2
hg19_v2_chr9_-_119162885_119162885	0.0482623	FOXA2_FOXJ3	ENST00000445861.2|PAPPA-AS1|ENSG00000256040.1|PAPPA antisense RNA 1
hg19_v2_chr11_-_5537920_5537935	0.0482013	FOXA2_FOXJ3	ENST00000380184.1|UBQLNL|ENSG00000175518.6|ubiquilin-like
hg19_v2_chr3_+_119298280_119298392	0.0481006	FOXA2_FOXJ3	ENST00000481816.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr3_-_157221128_157221216	0.0479118	FOXA2_FOXJ3	ENST00000392833.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1 	ENST00000362010.2|VEPH1|ENSG00000197415.7|ventricular zone expressed PH domain-containing 1
hg19_v2_chr7_-_72972319_72972347	0.0477312	FOXA2_FOXJ3	ENST00000223368.2|BCL7B|ENSG00000106635.3|B-cell CLL/lymphoma 7B
hg19_v2_chr4_-_70518941_70518967	0.0468454	FOXA2_FOXJ3	ENST00000286604.4|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000505512.1|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000514019.1|UGT2A1|ENSG00000270386.1|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg19_v2_chr17_-_685493_685548	0.0466414	FOXA2_FOXJ3	ENST00000536578.1|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4 	ENST00000301328.5|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4 	ENST00000576419.1|GLOD4|ENSG00000167699.9|glyoxalase domain containing 4
hg19_v2_chr15_-_81616446_81616466	0.0463808	FOXA2_FOXJ3	ENST00000302824.6|STARD5|ENSG00000172345.9|StAR-related lipid transfer (START) domain containing 5
hg19_v2_chr1_-_168106536_168106821	0.0463555	FOXA2_FOXJ3	ENST00000537209.1|GPR161|ENSG00000143147.10|G protein-coupled receptor 161 	ENST00000361697.2|GPR161|ENSG00000143147.10|G protein-coupled receptor 161 	ENST00000546300.1|GPR161|ENSG00000143147.10|G protein-coupled receptor 161 	ENST00000367835.1|GPR161|ENSG00000143147.10|G protein-coupled receptor 161
hg19_v2_chr14_+_57046530_57046602	0.0457028	FOXA2_FOXJ3	ENST00000536419.1|TMEM260|ENSG00000070269.9|transmembrane protein 260 	ENST00000538838.1|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr7_-_30009542_30009562	0.0456342	FOXA2_FOXJ3	ENST00000438497.1|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chr9_-_21368075_21368075	0.045384	FOXA2_FOXJ3	ENST00000449498.1|IFNA13|ENSG00000233816.2|interferon, alpha 13
hg19_v2_chr11_+_62554860_62554902	0.0451006	FOXA2_FOXJ3	ENST00000533861.1|TMEM179B|ENSG00000185475.4|transmembrane protein 179B 	ENST00000333449.4|TMEM179B|ENSG00000185475.4|transmembrane protein 179B
hg19_v2_chr10_-_61720640_61720671	0.0450992	FOXA2_FOXJ3	ENST00000521074.1|C10orf40|ENSG00000235931.2|chromosome 10 open reading frame 40 	ENST00000444900.1|C10orf40|ENSG00000235931.2|chromosome 10 open reading frame 40
hg19_v2_chr9_-_106087316_106087352	0.0449851	FOXA2_FOXJ3	ENST00000411575.1|RP11-341A22.2|ENSG00000225564.2|RP11-341A22.2
hg19_v2_chr9_-_130679257_130679336	0.0448251	FOXA2_FOXJ3	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr6_-_105307417_105307435	0.0447426	FOXA2_FOXJ3	ENST00000524020.1|HACE1|ENSG00000085382.7|HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1
hg19_v2_chr4_+_15376165_15376178	0.0444135	FOXA2_FOXJ3	ENST00000382383.3|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000429690.1|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr10_-_61899124_61899158	0.0443076	FOXA2_FOXJ3	ENST00000373815.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_-_191878681_191878823	0.0440973	FOXA2_FOXJ3	ENST00000409465.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr8_-_93978333_93978345	0.0439897	FOXA2_FOXJ3	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr3_+_128968437_128968505	0.0439078	FOXA2_FOXJ3	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chr20_+_56964169_56964182	0.043818	FOXA2_FOXJ3	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr17_+_7531281_7531320	0.0436907	FOXA2_FOXJ3	ENST00000575729.1|SHBG|ENSG00000129214.10|sex hormone-binding globulin 	ENST00000340624.5|SHBG|ENSG00000129214.10|sex hormone-binding globulin
hg19_v2_chr8_-_93978346_93978355	0.0432347	FOXA2_FOXJ3	ENST00000523580.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr8_-_128231299_128231352	0.0431913	FOXA2_FOXJ3	ENST00000500112.1|CCAT1|ENSG00000247844.1|colon cancer associated transcript 1 (non-protein coding)
hg19_v2_chr15_+_57998923_57998934	0.0420972	FOXA2_FOXJ3	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
hg19_v2_chr17_-_41050716_41050751	0.04187	FOXA2_FOXJ3	ENST00000417193.1|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000301683.3|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000436546.1|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000431109.2|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671
hg19_v2_chrX_+_10124977_10125036	0.0418162	FOXA2_FOXJ3	ENST00000380833.4|CLCN4|ENSG00000073464.7|chloride channel, voltage-sensitive 4
hg19_v2_chr14_-_24020858_24020988	0.0414191	FOXA2_FOXJ3	ENST00000419474.3|ZFHX2|ENSG00000136367.12|zinc finger homeobox 2
hg19_v2_chr5_+_167182003_167182014	0.0409465	FOXA2_FOXJ3	ENST00000520394.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr6_-_42016385_42016706	0.0409297	FOXA2_FOXJ3	ENST00000502771.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000508143.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000514588.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000510503.1|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000415497.2|CCND3|ENSG00000112576.8|cyclin D3 	ENST00000372988.4|CCND3|ENSG00000112576.8|cyclin D3
hg19_v2_chr19_+_107471_107471	0.0407801	FOXA2_FOXJ3	ENST00000585993.1|OR4F17|ENSG00000176695.5|olfactory receptor, family 4, subfamily F, member 17
hg19_v2_chr3_+_136649311_136649360	0.0402219	FOXA2_FOXJ3	ENST00000469404.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1 	ENST00000467911.1|NCK1|ENSG00000158092.2|NCK adaptor protein 1
hg19_v2_chr2_+_68592305_68592405	0.0402115	FOXA2_FOXJ3	ENST00000234313.7|PLEK|ENSG00000115956.9|pleckstrin
hg19_v2_chr1_-_8075693_8075757	0.0401817	FOXA2_FOXJ3	ENST00000467067.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1
hg19_v2_chr16_+_53469525_53469598	0.0395956	FOXA2_FOXJ3	ENST00000544405.2|RBL2|ENSG00000103479.10|retinoblastoma-like 2 (p130)
hg19_v2_chr20_-_35329063_35329078	0.0394576	FOXA2_FOXJ3	ENST00000422536.1|NDRG3|ENSG00000101079.16|NDRG family member 3
hg19_v2_chr2_+_96257766_96257766	0.039452	FOXA2_FOXJ3	ENST00000272395.2|TRIM43|ENSG00000144015.4|tripartite motif containing 43
hg19_v2_chr5_+_159614374_159614397	0.0393092	FOXA2_FOXJ3	ENST00000393980.4|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr3_+_122513642_122513664	0.0390732	FOXA2_FOXJ3	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr17_-_19290483_19290553	0.0386485	FOXA2_FOXJ3	ENST00000395592.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4 	ENST00000299610.4|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr13_+_73629107_73629148	0.0382293	FOXA2_FOXJ3	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr1_-_100643765_100643829	0.0381176	FOXA2_FOXJ3	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr19_-_48614063_48614093	0.0376908	FOXA2_FOXJ3	ENST00000599921.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent) 	ENST00000599111.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr4_-_80994210_80994284	0.0369489	FOXA2_FOXJ3	ENST00000403729.2|ANTXR2|ENSG00000163297.12|anthrax toxin receptor 2
hg19_v2_chr5_+_166711804_166711843	0.0367416	FOXA2_FOXJ3	ENST00000518659.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2 	ENST00000545108.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr3_+_121902511_121902539	0.0367168	FOXA2_FOXJ3	ENST00000490131.1|CASR|ENSG00000036828.9|calcium-sensing receptor
hg19_v2_chr3_+_142315225_142315290	0.0366682	FOXA2_FOXJ3	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr5_-_43043272_43043354	0.0365952	FOXA2_FOXJ3	ENST00000314890.3|ANXA2R|ENSG00000177721.3|annexin A2 receptor
hg19_v2_chr3_+_108541545_108541569	0.036594	FOXA2_FOXJ3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr1_+_74701062_74701099	0.0363547	FOXA2_FOXJ3	ENST00000326637.3|TNNI3K|ENSG00000116783.10|TNNI3 interacting kinase
hg19_v2_chr1_-_202927388_202927448	0.0363032	FOXA2_FOXJ3	ENST00000426229.1|ADIPOR1|ENSG00000159346.8|adiponectin receptor 1 	ENST00000367254.3|ADIPOR1|ENSG00000159346.8|adiponectin receptor 1
hg19_v2_chr16_+_57847684_57847684	0.0362855	FOXA2_FOXJ3	ENST00000335616.2|CTD-2600O9.1|ENSG00000187185.3|uncharacterized protein LOC388282
hg19_v2_chr17_-_7531121_7531198	0.0360488	FOXA2_FOXJ3	ENST00000573566.1|SAT2|ENSG00000141504.7|spermidine/spermine N1-acetyltransferase family member 2 	ENST00000269298.5|SAT2|ENSG00000141504.7|spermidine/spermine N1-acetyltransferase family member 2
hg19_v2_chr1_+_149858461_149858525	0.0359496	FOXA2_FOXJ3	ENST00000331380.2|HIST2H2AC|ENSG00000184260.4|histone cluster 2, H2ac
hg19_v2_chr20_+_36373032_36373047	0.0356237	FOXA2_FOXJ3	ENST00000373473.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr10_-_14050522_14050584	0.0355311	FOXA2_FOXJ3	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr20_+_48552908_48552949	0.035496	FOXA2_FOXJ3	ENST00000244061.2|RNF114|ENSG00000124226.7|ring finger protein 114
hg19_v2_chr6_+_12717892_12717903	0.0354813	FOXA2_FOXJ3	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr1_+_161123536_161123588	0.035303	FOXA2_FOXJ3	ENST00000368003.5|UFC1|ENSG00000143222.7|ubiquitin-fold modifier conjugating enzyme 1
hg19_v2_chr1_-_151345159_151345209	0.0349741	FOXA2_FOXJ3	ENST00000458566.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000447402.3|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000426705.2|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000435071.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000368868.5|SELENBP1|ENSG00000143416.16|selenium binding protein 1
hg19_v2_chr1_+_145883868_145883868	0.0348244	FOXA2_FOXJ3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr11_+_2405833_2405893	0.0344834	FOXA2_FOXJ3	ENST00000527343.1|CD81|ENSG00000110651.7|CD81 molecule 	ENST00000464784.2|CD81|ENSG00000110651.7|CD81 molecule
hg19_v2_chrX_+_24167828_24167907	0.0343237	FOXA2_FOXJ3	ENST00000379188.3|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000419690.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000379177.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000304543.5|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr1_-_186365908_186365908	0.0341074	FOXA2_FOXJ3	ENST00000598663.1|AL596220.1|ENSG00000268662.1|Uncharacterized protein
hg19_v2_chr1_+_198608146_198608247	0.0340243	FOXA2_FOXJ3	ENST00000367376.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000352140.3|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000594404.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000598951.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000530727.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000442510.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367367.4|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000348564.6|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000367364.1|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C 	ENST00000413409.2|PTPRC|ENSG00000081237.14|protein tyrosine phosphatase, receptor type, C
hg19_v2_chr3_-_64009658_64009687	0.0338651	FOXA2_FOXJ3	ENST00000394431.2|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr4_-_40477766_40477783	0.0336778	FOXA2_FOXJ3	ENST00000507180.1|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr4_+_110769258_110769358	0.0336741	FOXA2_FOXJ3	ENST00000594814.1|LRIT3|ENSG00000183423.7|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
hg19_v2_chr16_-_25122735_25122779	0.033658	FOXA2_FOXJ3	ENST00000563176.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr1_-_231560790_231560790	0.0336111	FOXA2_FOXJ3	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr9_-_104198042_104198105	0.033377	FOXA2_FOXJ3	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr3_+_174577070_174577136	0.0333345	FOXA2_FOXJ3	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr4_+_69313145_69313167	0.0330539	FOXA2_FOXJ3	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr3_-_139195350_139195370	0.0330354	FOXA2_FOXJ3	ENST00000232217.2|RBP2|ENSG00000114113.2|retinol binding protein 2, cellular
hg19_v2_chr17_-_36831156_36831187	0.0329283	FOXA2_FOXJ3	ENST00000325814.5|C17orf96|ENSG00000179294.5|chromosome 17 open reading frame 96
hg19_v2_chr1_+_87797351_87797441	0.0326994	FOXA2_FOXJ3	ENST00000370542.1|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr14_+_35747825_35747847	0.0325605	FOXA2_FOXJ3	ENST00000540871.1|PSMA6|ENSG00000100902.6|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v2_chr6_+_74171301_74171493	0.0324707	FOXA2_FOXJ3	ENST00000415954.2|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000498286.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370305.1|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1 	ENST00000370300.4|MTO1|ENSG00000135297.11|mitochondrial tRNA translation optimization 1
hg19_v2_chr7_-_139876812_139876860	0.0324423	FOXA2_FOXJ3	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr1_+_77333117_77333139	0.0323633	FOXA2_FOXJ3	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr9_-_4299874_4299916	0.0322482	FOXA2_FOXJ3	ENST00000381971.3|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3 	ENST00000477901.1|GLIS3|ENSG00000107249.17|GLIS family zinc finger 3
hg19_v2_chr4_-_111120132_111120167	0.0322371	FOXA2_FOXJ3	ENST00000506625.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr5_+_167181917_167181979	0.0315954	FOXA2_FOXJ3	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr1_-_241799232_241799232	0.0315284	FOXA2_FOXJ3	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr19_-_9546177_9546224	0.0314556	FOXA2_FOXJ3	ENST00000592292.1|ZNF266|ENSG00000174652.13|zinc finger protein 266 	ENST00000588221.1|ZNF266|ENSG00000174652.13|zinc finger protein 266
hg19_v2_chr15_+_58430368_58430401	0.0314322	FOXA2_FOXJ3	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr18_+_3449330_3449411	0.0314254	FOXA2_FOXJ3	ENST00000549253.1|TGIF1|ENSG00000177426.16|TGFB-induced factor homeobox 1
hg19_v2_chr19_-_48614033_48614048	0.0313241	FOXA2_FOXJ3	ENST00000354276.3|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr21_-_27423339_27423352	0.0312789	FOXA2_FOXJ3	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr16_-_24942411_24942481	0.0308462	FOXA2_FOXJ3	ENST00000571843.1|ARHGAP17|ENSG00000140750.12|Rho GTPase activating protein 17
hg19_v2_chr14_-_102605983_102606042	0.0308168	FOXA2_FOXJ3	ENST00000334701.7|HSP90AA1|ENSG00000080824.14|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg19_v2_chr1_+_144811943_144811943	0.0305594	FOXA2_FOXJ3	ENST00000281815.8|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9
hg19_v2_chr1_-_241803649_241803678	0.0303806	FOXA2_FOXJ3	ENST00000366554.2|OPN3|ENSG00000054277.8|opsin 3
hg19_v2_chr4_-_140005443_140005650	0.0301108	FOXA2_FOXJ3	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr5_-_146833222_146833261	0.0300832	FOXA2_FOXJ3	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chr7_+_99425633_99425739	0.0300588	FOXA2_FOXJ3	ENST00000354829.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000421837.2|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000417625.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000342499.4|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000444905.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000415413.1|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000312017.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43 	ENST00000222382.5|CYP3A43|ENSG00000021461.12|cytochrome P450, family 3, subfamily A, polypeptide 43
hg19_v2_chr13_+_98086445_98086493	0.0299282	FOXA2_FOXJ3	ENST00000245304.4|RAP2A|ENSG00000125249.6|RAP2A, member of RAS oncogene family
hg19_v2_chr16_-_28374829_28374829	0.0297061	FOXA2_FOXJ3	ENST00000532254.1|NPIPB6|ENSG00000198156.6|nuclear pore complex interacting protein family, member B6
hg19_v2_chr22_+_41074754_41074754	0.0296004	FOXA2_FOXJ3	ENST00000249016.4|MCHR1|ENSG00000128285.4|melanin-concentrating hormone receptor 1
hg19_v2_chr19_-_9226439_9226439	0.0295773	FOXA2_FOXJ3	ENST00000293614.1|OR7G1|ENSG00000161807.2|olfactory receptor, family 7, subfamily G, member 1 	ENST00000541538.1|OR7G1|ENSG00000161807.2|olfactory receptor, family 7, subfamily G, member 1
hg19_v2_chr7_+_112063192_112063237	0.0295608	FOXA2_FOXJ3	ENST00000005558.4|IFRD1|ENSG00000006652.9|interferon-related developmental regulator 1
hg19_v2_chr8_+_74271144_74271162	0.0294665	FOXA2_FOXJ3	ENST00000519134.1|RP11-434I12.3|ENSG00000253339.1|RP11-434I12.3	ENST00000518355.1|RP11-434I12.3|ENSG00000253339.1|RP11-434I12.3
hg19_v2_chr12_-_12837423_12837501	0.0294505	FOXA2_FOXJ3	ENST00000540510.1|GPR19|ENSG00000183150.3|G protein-coupled receptor 19
hg19_v2_chr17_+_42148225_42148317	0.0293195	FOXA2_FOXJ3	ENST00000591696.1|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr14_-_58894223_58894261	0.0293143	FOXA2_FOXJ3	ENST00000555593.1|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr21_-_16125773_16125787	0.0292214	FOXA2_FOXJ3	ENST00000454128.2|AF127936.3|ENSG00000232884.3|AF127936.3
hg19_v2_chr22_+_24407642_24407770	0.0292034	FOXA2_FOXJ3	ENST00000454754.1|CABIN1|ENSG00000099991.12|calcineurin binding protein 1 	ENST00000263119.5|CABIN1|ENSG00000099991.12|calcineurin binding protein 1
hg19_v2_chr1_-_169555709_169555730	0.0291726	FOXA2_FOXJ3	ENST00000546081.1|F5|ENSG00000198734.6|coagulation factor V (proaccelerin, labile factor)
hg19_v2_chr2_+_40973618_40973627	0.0291632	FOXA2_FOXJ3	ENST00000420187.1|AC007317.1|ENSG00000233128.1|AC007317.1
hg19_v2_chr16_+_28763108_28763108	0.0291595	FOXA2_FOXJ3	ENST00000357796.3|NPIPB9|ENSG00000196993.4|nuclear pore complex interacting protein family, member B9 	ENST00000550983.1|NPIPB9|ENSG00000196993.4|nuclear pore complex interacting protein family, member B9
hg19_v2_chr19_-_46142362_46142504	0.0290731	FOXA2_FOXJ3	ENST00000586770.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000591721.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr11_+_65101225_65101359	0.029007	FOXA2_FOXJ3	ENST00000528416.1|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000415073.2|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000252268.4|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2
hg19_v2_chr11_-_47447767_47447817	0.0289367	FOXA2_FOXJ3	ENST00000530651.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000524447.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000531051.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000526993.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000602866.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr1_+_43855560_43855640	0.0285313	FOXA2_FOXJ3	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr20_-_30311703_30311792	0.0281137	FOXA2_FOXJ3	ENST00000450273.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000456404.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000420488.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000439267.1|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr4_+_118955500_118955612	0.0280966	FOXA2_FOXJ3	ENST00000296499.5|NDST3|ENSG00000164100.7|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
hg19_v2_chr15_-_90892669_90892669	0.0279815	FOXA2_FOXJ3	ENST00000412799.2|GABARAPL3|ENSG00000238244.2|GABA(A) receptors associated protein like 3, pseudogene
hg19_v2_chr5_-_159846066_159846095	0.0277394	FOXA2_FOXJ3	ENST00000519349.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae) 	ENST00000520664.1|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr2_+_113885138_113885181	0.0274142	FOXA2_FOXJ3	ENST00000409930.3|IL1RN|ENSG00000136689.14|interleukin 1 receptor antagonist
hg19_v2_chr2_-_201729393_201729428	0.027284	FOXA2_FOXJ3	ENST00000321356.4|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr7_-_81635106_81635130	0.0272064	FOXA2_FOXJ3	ENST00000443883.1|CACNA2D1|ENSG00000153956.11|calcium channel, voltage-dependent, alpha 2/delta subunit 1
hg19_v2_chr22_+_30279144_30279202	0.0270484	FOXA2_FOXJ3	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr2_+_175260514_175260536	0.0270455	FOXA2_FOXJ3	ENST00000424069.1|SCRN3|ENSG00000144306.9|secernin 3 	ENST00000427038.1|SCRN3|ENSG00000144306.9|secernin 3
hg19_v2_chr19_-_44160768_44160794	0.0269665	FOXA2_FOXJ3	ENST00000593447.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr15_+_99433570_99433585	0.0267063	FOXA2_FOXJ3	ENST00000558898.1|IGF1R|ENSG00000140443.9|insulin-like growth factor 1 receptor
hg19_v2_chr3_+_119298429_119298454	0.0265739	FOXA2_FOXJ3	ENST00000478927.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr9_-_19786926_19786926	0.026563	FOXA2_FOXJ3	ENST00000341998.2|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 	ENST00000286344.3|SLC24A2|ENSG00000155886.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
hg19_v2_chr7_+_2393714_2393749	0.0265532	FOXA2_FOXJ3	ENST00000431643.1|EIF3B|ENSG00000106263.13|eukaryotic translation initiation factor 3, subunit B
hg19_v2_chr2_+_114195268_114195340	0.0264476	FOXA2_FOXJ3	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr20_-_62582475_62582484	0.0264202	FOXA2_FOXJ3	ENST00000369908.5|UCKL1|ENSG00000198276.9|uridine-cytidine kinase 1-like 1
hg19_v2_chr8_-_93978216_93978292	0.0263275	FOXA2_FOXJ3	ENST00000517751.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000524107.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr3_-_183145873_183146063	0.0262019	FOXA2_FOXJ3	ENST00000447025.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000414362.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000328913.3|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2
hg19_v2_chr16_+_14980632_14980632	0.0257196	FOXA2_FOXJ3	ENST00000565655.1|NOMO1|ENSG00000103512.10|NODAL modulator 1
hg19_v2_chr22_-_25170444_25170444	0.0254459	FOXA2_FOXJ3	ENST00000533313.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3 	ENST00000527701.1|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr20_+_9049303_9049454	0.0252057	FOXA2_FOXJ3	ENST00000407043.2|PLCB4|ENSG00000101333.12|phospholipase C, beta 4 	ENST00000441846.1|PLCB4|ENSG00000101333.12|phospholipase C, beta 4
hg19_v2_chr3_-_15382875_15382889	0.0250118	FOXA2_FOXJ3	ENST00000408919.3|SH3BP5|ENSG00000131370.11|SH3-domain binding protein 5 (BTK-associated)
hg19_v2_chr11_-_9286921_9286937	0.0249223	FOXA2_FOXJ3	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chr17_+_7487146_7487211	0.0248621	FOXA2_FOXJ3	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr22_-_38699003_38699017	0.0248171	FOXA2_FOXJ3	ENST00000451964.1|CSNK1E|ENSG00000213923.6|casein kinase 1, epsilon
hg19_v2_chr20_+_36322408_36322516	0.0246718	FOXA2_FOXJ3	ENST00000361383.6|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000447935.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000405275.2|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr2_-_170430366_170430390	0.0246287	FOXA2_FOXJ3	ENST00000453153.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000445210.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr2_-_202563414_202563426	0.0244219	FOXA2_FOXJ3	ENST00000409474.3|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 	ENST00000315506.7|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4) 	ENST00000359962.5|MPP4|ENSG00000082126.13|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
hg19_v2_chr9_-_13175823_13175869	0.0244033	FOXA2_FOXJ3	ENST00000545857.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr14_+_57671888_57671888	0.0241237	FOXA2_FOXJ3	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr15_+_79166065_79166163	0.0240231	FOXA2_FOXJ3	ENST00000559690.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1 	ENST00000559158.1|MORF4L1|ENSG00000185787.10|mortality factor 4 like 1
hg19_v2_chr9_+_127962841_127962855	0.0238587	FOXA2_FOXJ3	ENST00000394124.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr4_-_164534657_164534701	0.0238308	FOXA2_FOXJ3	ENST00000339875.5|MARCH1|ENSG00000145416.9|membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase
hg19_v2_chr8_+_21777243_21777275	0.02365	FOXA2_FOXJ3	ENST00000521303.1|XPO7|ENSG00000130227.12|exportin 7
hg19_v2_chr1_-_57431679_57431810	0.0235299	FOXA2_FOXJ3	ENST00000371237.4|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000535057.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000543257.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide
hg19_v2_chr1_+_239882842_239882850	0.0232913	FOXA2_FOXJ3	ENST00000448020.1|CHRM3|ENSG00000133019.7|cholinergic receptor, muscarinic 3
hg19_v2_chr6_+_97372645_97372665	0.0232815	FOXA2_FOXJ3	ENST00000536676.1|KLHL32|ENSG00000186231.12|kelch-like family member 32 	ENST00000544166.1|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr16_+_66410244_66410294	0.0231125	FOXA2_FOXJ3	ENST00000562048.1|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium) 	ENST00000568155.2|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr20_+_48429356_48429458	0.02311	FOXA2_FOXJ3	ENST00000361573.2|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000541138.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000539601.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr18_-_48351743_48351772	0.0230985	FOXA2_FOXJ3	ENST00000588444.1|MRO|ENSG00000134042.8|maestro 	ENST00000256425.2|MRO|ENSG00000134042.8|maestro 	ENST00000428869.2|MRO|ENSG00000134042.8|maestro
hg19_v2_chr10_+_62538089_62538244	0.0227018	FOXA2_FOXJ3	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr1_+_45140400_45140427	0.0226687	FOXA2_FOXJ3	ENST00000453711.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr19_-_44160692_44160725	0.0225441	FOXA2_FOXJ3	ENST00000595038.1|PLAUR|ENSG00000011422.7|plasminogen activator, urokinase receptor
hg19_v2_chr11_-_59612969_59612994	0.0223718	FOXA2_FOXJ3	ENST00000541311.1|GIF|ENSG00000134812.3|gastric intrinsic factor (vitamin B synthesis) 	ENST00000257248.2|GIF|ENSG00000134812.3|gastric intrinsic factor (vitamin B synthesis)
hg19_v2_chr5_-_110062349_110062380	0.0223499	FOXA2_FOXJ3	ENST00000511883.2|TMEM232|ENSG00000186952.10|transmembrane protein 232 	ENST00000455884.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr19_-_46148820_46148887	0.0221907	FOXA2_FOXJ3	ENST00000587152.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr1_+_181452678_181452716	0.0221732	FOXA2_FOXJ3	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr1_-_241803679_241803701	0.0220779	FOXA2_FOXJ3	ENST00000331838.5|OPN3|ENSG00000054277.8|opsin 3
hg19_v2_chrX_+_85969626_85969664	0.0220166	FOXA2_FOXJ3	ENST00000484479.1|DACH2|ENSG00000126733.16|dachshund homolog 2 (Drosophila)
hg19_v2_chr2_-_55920952_55921045	0.021883	FOXA2_FOXJ3	ENST00000447944.2|PNPT1|ENSG00000138035.10|polyribonucleotide nucleotidyltransferase 1
hg19_v2_chr4_+_159236462_159236471	0.0218434	FOXA2_FOXJ3	ENST00000460056.2|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr2_-_207078086_207078106	0.021674	FOXA2_FOXJ3	ENST00000442134.1|GPR1|ENSG00000183671.8|G protein-coupled receptor 1
hg19_v2_chr4_-_90756769_90756846	0.0216292	FOXA2_FOXJ3	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr8_+_30300119_30300137	0.0215536	FOXA2_FOXJ3	ENST00000520191.1|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr16_-_65106110_65106163	0.0214185	FOXA2_FOXJ3	ENST00000562882.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000567934.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr19_+_41768561_41768586	0.0213601	FOXA2_FOXJ3	ENST00000599719.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1 	ENST00000601309.1|HNRNPUL1|ENSG00000105323.12|heterogeneous nuclear ribonucleoprotein U-like 1
hg19_v2_chr16_+_27078219_27078229	0.0212912	FOXA2_FOXJ3	ENST00000418886.1|C16orf82|ENSG00000234186.2|chromosome 16 open reading frame 82
hg19_v2_chr13_-_99630233_99630348	0.0209886	FOXA2_FOXJ3	ENST00000376460.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9 	ENST00000442173.1|DOCK9|ENSG00000088387.13|dedicator of cytokinesis 9
hg19_v2_chr1_+_24018269_24018274	0.0208792	FOXA2_FOXJ3	ENST00000374550.3|RPL11|ENSG00000142676.8|ribosomal protein L11
hg19_v2_chr3_-_107941209_107941227	0.0208766	FOXA2_FOXJ3	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr12_+_48516357_48516436	0.0207702	FOXA2_FOXJ3	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr14_+_105267250_105267250	0.020587	FOXA2_FOXJ3	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr1_-_1310870_1310920	0.0204991	FOXA2_FOXJ3	ENST00000338338.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr3_+_130650738_130650888	0.0203589	FOXA2_FOXJ3	ENST00000504612.1|ATP2C1|ENSG00000017260.15|ATPase, Ca++ transporting, type 2C, member 1
hg19_v2_chr1_+_161035655_161035655	0.0203412	FOXA2_FOXJ3	ENST00000600454.1|AL591806.1|ENSG00000268154.1|Uncharacterized protein
hg19_v2_chr2_+_109223595_109223617	0.0202085	FOXA2_FOXJ3	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chrX_-_133792480_133792522	0.020204	FOXA2_FOXJ3	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chr1_-_213188772_213188856	0.0200689	FOXA2_FOXJ3	ENST00000544555.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr2_+_74120094_74120142	0.0200281	FOXA2_FOXJ3	ENST00000409731.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000345517.3|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409918.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000442912.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric 	ENST00000409624.1|ACTG2|ENSG00000163017.9|actin, gamma 2, smooth muscle, enteric
hg19_v2_chr3_+_109128837_109128884	0.0198601	FOXA2_FOXJ3	ENST00000497996.1|RP11-702L6.4|ENSG00000228980.3|RP11-702L6.4
hg19_v2_chr11_+_58695096_58695118	0.0198595	FOXA2_FOXJ3	ENST00000525608.1|GLYATL1|ENSG00000166840.9|glycine-N-acyltransferase-like 1 	ENST00000526351.1|GLYATL1|ENSG00000166840.9|glycine-N-acyltransferase-like 1
hg19_v2_chr12_-_10324716_10324742	0.0198046	FOXA2_FOXJ3	ENST00000545927.1|OLR1|ENSG00000173391.4|oxidized low density lipoprotein (lectin-like) receptor 1 	ENST00000432556.2|OLR1|ENSG00000173391.4|oxidized low density lipoprotein (lectin-like) receptor 1 	ENST00000309539.3|OLR1|ENSG00000173391.4|oxidized low density lipoprotein (lectin-like) receptor 1 	ENST00000544577.1|OLR1|ENSG00000173391.4|oxidized low density lipoprotein (lectin-like) receptor 1
hg19_v2_chr15_-_74658519_74658558	0.0194364	FOXA2_FOXJ3	ENST00000450547.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000358632.4|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v2_chr7_-_37026108_37026145	0.0193968	FOXA2_FOXJ3	ENST00000396045.3|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr19_-_15087839_15087849	0.0193455	FOXA2_FOXJ3	ENST00000600144.1|SLC1A6|ENSG00000105143.8|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
hg19_v2_chr3_-_187009798_187009812	0.0192523	FOXA2_FOXJ3	ENST00000337774.5|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v2_chr3_+_132036243_132036268	0.0192357	FOXA2_FOXJ3	ENST00000475741.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000351273.7|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr22_-_39268308_39268319	0.0192181	FOXA2_FOXJ3	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr5_-_36241900_36241976	0.0189834	FOXA2_FOXJ3	ENST00000381937.4|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial 	ENST00000514504.1|NADK2|ENSG00000152620.8|NAD kinase 2, mitochondrial
hg19_v2_chr9_+_70856397_70856397	0.0189245	FOXA2_FOXJ3	ENST00000360171.6|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr8_+_134029937_134029944	0.0187894	FOXA2_FOXJ3	ENST00000518108.1|TG|ENSG00000042832.7|thyroglobulin
hg19_v2_chr7_+_871559_871677	0.0185843	FOXA2_FOXJ3	ENST00000421580.1|SUN1|ENSG00000164828.13|Sad1 and UNC84 domain containing 1
hg19_v2_chr16_+_56969284_56969314	0.0185483	FOXA2_FOXJ3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr2_-_175260368_175260450	0.0181759	FOXA2_FOXJ3	ENST00000342016.3|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1 	ENST00000362053.5|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1
hg19_v2_chr5_+_96212185_96212210	0.0180703	FOXA2_FOXJ3	ENST00000379904.4|ERAP2|ENSG00000164308.12|endoplasmic reticulum aminopeptidase 2
hg19_v2_chr2_+_61372226_61372273	0.0180298	FOXA2_FOXJ3	ENST00000426997.1|C2orf74|ENSG00000237651.2|chromosome 2 open reading frame 74
hg19_v2_chr4_-_170679024_170679104	0.0179731	FOXA2_FOXJ3	ENST00000393381.2|C4orf27|ENSG00000056050.6|chromosome 4 open reading frame 27
hg19_v2_chr12_-_91574142_91574289	0.0179611	FOXA2_FOXJ3	ENST00000547937.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr16_+_11439286_11439328	0.0179574	FOXA2_FOXJ3	ENST00000312499.5|RMI2|ENSG00000175643.7|RecQ mediated genome instability 2 	ENST00000576027.1|RMI2|ENSG00000175643.7|RecQ mediated genome instability 2
hg19_v2_chr15_+_58430567_58430589	0.017901	FOXA2_FOXJ3	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr19_-_12721616_12721640	0.0178447	FOXA2_FOXJ3	ENST00000311437.6|ZNF490|ENSG00000188033.5|zinc finger protein 490
hg19_v2_chr4_+_147096837_147096912	0.0177235	FOXA2_FOXJ3	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr8_+_27631903_27632045	0.0176616	FOXA2_FOXJ3	ENST00000305188.8|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr13_-_79980315_79980403	0.0175614	FOXA2_FOXJ3	ENST00000438737.2|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr11_+_58695174_58695188	0.0173949	FOXA2_FOXJ3	ENST00000317391.4|GLYATL1|ENSG00000166840.9|glycine-N-acyltransferase-like 1
hg19_v2_chr4_-_186456766_186456794	0.0169665	FOXA2_FOXJ3	ENST00000284771.6|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr6_+_10528560_10528589	0.0168211	FOXA2_FOXJ3	ENST00000379597.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr2_+_233527443_233527542	0.0165785	FOXA2_FOXJ3	ENST00000410095.1|EFHD1|ENSG00000115468.7|EF-hand domain family, member D1
hg19_v2_chr11_+_20044096_20044116	0.0164773	FOXA2_FOXJ3	ENST00000533917.1|NAV2|ENSG00000166833.15|neuron navigator 2
hg19_v2_chr19_-_39826639_39826825	0.0159482	FOXA2_FOXJ3	ENST00000602185.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000598034.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000601387.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000595636.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000253054.8|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000594700.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000597595.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma
hg19_v2_chr6_+_29424958_29424965	0.0159381	FOXA2_FOXJ3	ENST00000377136.1|OR2H1|ENSG00000204688.5|olfactory receptor, family 2, subfamily H, member 1 	ENST00000377133.1|OR2H1|ENSG00000204688.5|olfactory receptor, family 2, subfamily H, member 1
hg19_v2_chr6_+_134758827_134758863	0.0154754	FOXA2_FOXJ3	ENST00000431422.1|LINC01010|ENSG00000236700.1|long intergenic non-protein coding RNA 1010
hg19_v2_chr1_+_22778337_22778472	0.0154654	FOXA2_FOXJ3	ENST00000404138.1|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000400239.2|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000375647.4|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40 	ENST00000374651.4|ZBTB40|ENSG00000184677.12|zinc finger and BTB domain containing 40
hg19_v2_chr12_-_48213735_48213763	0.0154138	FOXA2_FOXJ3	ENST00000417902.1|HDAC7|ENSG00000061273.13|histone deacetylase 7 	ENST00000417107.1|HDAC7|ENSG00000061273.13|histone deacetylase 7
hg19_v2_chr1_-_28559502_28559570	0.0154106	FOXA2_FOXJ3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr7_+_106505912_106505931	0.0152375	FOXA2_FOXJ3	ENST00000359195.3|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
hg19_v2_chr6_-_131291572_131291623	0.0151865	FOXA2_FOXJ3	ENST00000529208.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr1_+_203830703_203830743	0.0150946	FOXA2_FOXJ3	ENST00000414487.2|SNRPE|ENSG00000182004.8|small nuclear ribonucleoprotein polypeptide E
hg19_v2_chr2_-_201729284_201729359	0.0149518	FOXA2_FOXJ3	ENST00000434813.2|CLK1|ENSG00000013441.11|CDC-like kinase 1
hg19_v2_chr4_+_165675197_165675216	0.0148464	FOXA2_FOXJ3	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr1_+_207669573_207669606	0.0147387	FOXA2_FOXJ3	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr19_-_50666404_50666424	0.0146242	FOXA2_FOXJ3	ENST00000600293.1|IZUMO2|ENSG00000161652.8|IZUMO family member 2
hg19_v2_chr18_+_13382553_13382573	0.014611	FOXA2_FOXJ3	ENST00000586222.1|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr4_+_86525299_86525314	0.0144027	FOXA2_FOXJ3	ENST00000512201.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr7_-_33140498_33140517	0.0142143	FOXA2_FOXJ3	ENST00000448915.1|RP9|ENSG00000164610.4|retinitis pigmentosa 9 (autosomal dominant)
hg19_v2_chr18_+_21033239_21033302	0.0140604	FOXA2_FOXJ3	ENST00000581585.1|RIOK3|ENSG00000101782.10|RIO kinase 3 	ENST00000577501.1|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr12_+_99038998_99039078	0.0140153	FOXA2_FOXJ3	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr22_-_25170683_25170683	0.0139744	FOXA2_FOXJ3	ENST00000332271.5|PIWIL3|ENSG00000184571.9|piwi-like RNA-mediated gene silencing 3
hg19_v2_chr12_-_21928515_21928544	0.0139571	FOXA2_FOXJ3	ENST00000537950.1|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr5_+_154092396_154092462	0.0138532	FOXA2_FOXJ3	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr22_+_45148432_45148585	0.0137957	FOXA2_FOXJ3	ENST00000389774.2|ARHGAP8|ENSG00000241484.5|Rho GTPase activating protein 8 	ENST00000396119.2|ARHGAP8|ENSG00000241484.5|Rho GTPase activating protein 8 	ENST00000336963.4|ARHGAP8|ENSG00000241484.5|Rho GTPase activating protein 8 	ENST00000356099.6|ARHGAP8|ENSG00000241484.5|Rho GTPase activating protein 8 	ENST00000412433.1|ARHGAP8|ENSG00000241484.5|Rho GTPase activating protein 8
hg19_v2_chr6_-_29424848_29424848	0.0137609	FOXA2_FOXJ3	ENST00000377149.1|OR11A1|ENSG00000204694.6|olfactory receptor, family 11, subfamily A, member 1
hg19_v2_chr12_-_21927736_21927768	0.0136748	FOXA2_FOXJ3	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr18_-_25616519_25616549	0.0136623	FOXA2_FOXJ3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr12_+_32832134_32832196	0.0135737	FOXA2_FOXJ3	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr8_-_93978357_93978379	0.0135522	FOXA2_FOXJ3	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr9_+_127054254_127054276	0.0133693	FOXA2_FOXJ3	ENST00000422297.1|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr14_-_58894332_58894380	0.0131066	FOXA2_FOXJ3	ENST00000395159.2|TIMM9|ENSG00000100575.9|translocase of inner mitochondrial membrane 9 homolog (yeast)
hg19_v2_chr8_+_92221719_92221734	0.0130984	FOXA2_FOXJ3	ENST00000522862.1|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000523719.1|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr4_-_90757364_90757396	0.0129706	FOXA2_FOXJ3	ENST00000508895.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr7_+_151038850_151038915	0.0129294	FOXA2_FOXJ3	ENST00000355851.4|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000566856.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000470229.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1
hg19_v2_chr4_+_172734548_172734654	0.0129148	FOXA2_FOXJ3	ENST00000506823.1|GALNTL6|ENSG00000174473.11|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6
hg19_v2_chr11_-_47447970_47448029	0.0129084	FOXA2_FOXJ3	ENST00000298852.3|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000530912.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr1_-_216978709_216978728	0.012848	FOXA2_FOXJ3	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr7_+_106505696_106505798	0.012818	FOXA2_FOXJ3	ENST00000440650.2|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000496166.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 	ENST00000473541.1|PIK3CG|ENSG00000105851.6|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma
hg19_v2_chr2_-_46844242_46844258	0.0127252	FOXA2_FOXJ3	ENST00000281382.6|PIGF|ENSG00000151665.8|phosphatidylinositol glycan anchor biosynthesis, class F
hg19_v2_chr1_-_24194771_24194851	0.0125693	FOXA2_FOXJ3	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr6_-_100016527_100016589	0.0125229	FOXA2_FOXJ3	ENST00000523985.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000518714.1|CCNC|ENSG00000112237.8|cyclin C 	ENST00000520371.1|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr15_+_49462434_49462488	0.012254	FOXA2_FOXJ3	ENST00000558145.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000543495.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000544523.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560138.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr6_+_150263136_150263171	0.0122328	FOXA2_FOXJ3	ENST00000367351.3|ULBP2|ENSG00000131015.4|UL16 binding protein 2
hg19_v2_chr9_+_27109440_27109456	0.0122231	FOXA2_FOXJ3	ENST00000519080.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr12_-_92536433_92536459	0.0121539	FOXA2_FOXJ3	ENST00000551563.2|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000546975.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79 	ENST00000549802.1|C12orf79|ENSG00000257242.2|chromosome 12 open reading frame 79
hg19_v2_chr7_-_14028488_14028516	0.0121518	FOXA2_FOXJ3	ENST00000405358.4|ETV1|ENSG00000006468.9|ets variant 1
hg19_v2_chr17_-_29641084_29641103	0.0121232	FOXA2_FOXJ3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr17_+_16284604_16284661	0.0119086	FOXA2_FOXJ3	ENST00000395839.1|UBB|ENSG00000170315.9|ubiquitin B 	ENST00000395837.1|UBB|ENSG00000170315.9|ubiquitin B
hg19_v2_chr6_+_56911336_56911347	0.0118981	FOXA2_FOXJ3	ENST00000370733.4|KIAA1586|ENSG00000168116.9|KIAA1586
hg19_v2_chr12_+_107078474_107078533	0.0118932	FOXA2_FOXJ3	ENST00000552866.1|RFX4|ENSG00000111783.8|regulatory factor X, 4 (influences HLA class II expression) 	ENST00000229387.5|RFX4|ENSG00000111783.8|regulatory factor X, 4 (influences HLA class II expression)
hg19_v2_chr9_+_27109392_27109435	0.0118075	FOXA2_FOXJ3	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr2_+_98962618_98962651	0.0117515	FOXA2_FOXJ3	ENST00000393504.1|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3 	ENST00000436404.2|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3
hg19_v2_chr10_-_63995871_63996022	0.0117368	FOXA2_FOXJ3	ENST00000315289.2|RTKN2|ENSG00000182010.6|rhotekin 2
hg19_v2_chr4_-_186456652_186456668	0.0116079	FOXA2_FOXJ3	ENST00000284767.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3 	ENST00000284770.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr4_-_111120334_111120361	0.0115392	FOXA2_FOXJ3	ENST00000503885.1|ELOVL6|ENSG00000170522.5|ELOVL fatty acid elongase 6
hg19_v2_chr3_-_187009646_187009778	0.0115233	FOXA2_FOXJ3	ENST00000296280.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392470.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000169293.6|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000439271.1|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392472.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor) 	ENST00000392475.2|MASP1|ENSG00000127241.12|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)
hg19_v2_chr20_+_52105495_52105495	0.0113364	FOXA2_FOXJ3	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr8_+_100025476_100025548	0.0112057	FOXA2_FOXJ3	ENST00000355155.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000357162.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000358544.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000395996.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000441350.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast)
hg19_v2_chr7_-_30726065_30726065	0.0109943	FOXA2_FOXJ3	ENST00000341843.4|CRHR2|ENSG00000106113.14|corticotropin releasing hormone receptor 2
hg19_v2_chr11_-_72070206_72070250	0.0108364	FOXA2_FOXJ3	ENST00000544382.1|CLPB|ENSG00000162129.8|ClpB caseinolytic peptidase B homolog (E. coli)
hg19_v2_chr1_+_178310581_178310606	0.0108088	FOXA2_FOXJ3	ENST00000462775.1|RASAL2|ENSG00000075391.12|RAS protein activator like 2
hg19_v2_chr3_+_39448180_39448226	0.01067	FOXA2_FOXJ3	ENST00000301821.6|RPSA|ENSG00000168028.9|ribosomal protein SA 	ENST00000458478.1|RPSA|ENSG00000168028.9|ribosomal protein SA 	ENST00000443003.1|RPSA|ENSG00000168028.9|ribosomal protein SA
hg19_v2_chr10_+_101088836_101088861	0.01053	FOXA2_FOXJ3	ENST00000356713.4|CNNM1|ENSG00000119946.9|cyclin M1
hg19_v2_chr14_+_50234827_50234886	0.0104038	FOXA2_FOXJ3	ENST00000554589.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2 	ENST00000557247.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr14_-_60632011_60632035	0.010204	FOXA2_FOXJ3	ENST00000554101.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7 	ENST00000557137.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr14_+_67291158_67291192	0.010171	FOXA2_FOXJ3	ENST00000555456.1|GPHN|ENSG00000171723.11|gephyrin
hg19_v2_chr5_+_218356_218453	0.0101648	FOXA2_FOXJ3	ENST00000264932.6|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 	ENST00000504309.1|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 	ENST00000510361.1|SDHA|ENSG00000073578.12|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
hg19_v2_chr18_+_28898052_28898106	0.0100177	FOXA2_FOXJ3	ENST00000257192.4|DSG1|ENSG00000134760.5|desmoglein 1
hg19_v2_chr1_+_104198640_104198640	0.00990411	FOXA2_FOXJ3	ENST00000422549.1|AMY1A|ENSG00000237763.5|amylase, alpha 1A (salivary)
hg19_v2_chr9_+_37422663_37422743	0.00983047	FOXA2_FOXJ3	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chr1_-_43855479_43855486	0.00976897	FOXA2_FOXJ3	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr11_-_110561721_110561721	0.00974516	FOXA2_FOXJ3	ENST00000357139.3|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr9_-_28670283_28670283	0.00935405	FOXA2_FOXJ3	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chrX_-_138914394_138914447	0.0093401	FOXA2_FOXJ3	ENST00000327569.3|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000361648.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000370543.1|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C 	ENST00000359686.2|ATP11C|ENSG00000101974.10|ATPase, class VI, type 11C
hg19_v2_chr17_-_39942940_39943017	0.00924279	FOXA2_FOXJ3	ENST00000310706.5|JUP|ENSG00000173801.12|junction plakoglobin 	ENST00000393931.3|JUP|ENSG00000173801.12|junction plakoglobin 	ENST00000424457.1|JUP|ENSG00000173801.12|junction plakoglobin 	ENST00000591690.1|JUP|ENSG00000173801.12|junction plakoglobin
hg19_v2_chr12_+_49297887_49297898	0.00920755	FOXA2_FOXJ3	ENST00000266984.5|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr20_+_44035200_44035288	0.00910778	FOXA2_FOXJ3	ENST00000372717.1|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2 	ENST00000360981.4|DBNDD2|ENSG00000244274.3|dysbindin (dystrobrevin binding protein 1) domain containing 2
hg19_v2_chr16_-_69788816_69788846	0.0091012	FOXA2_FOXJ3	ENST00000268802.5|NOB1|ENSG00000141101.8|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)
hg19_v2_chr8_+_27632047_27632080	0.00907874	FOXA2_FOXJ3	ENST00000397418.2|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr2_+_109204909_109204928	0.00905477	FOXA2_FOXJ3	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr13_+_109248500_109248524	0.00900954	FOXA2_FOXJ3	ENST00000356711.2|MYO16|ENSG00000041515.11|myosin XVI
hg19_v2_chr10_-_69597915_69597926	0.00899739	FOXA2_FOXJ3	ENST00000225171.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr1_+_174844645_174844684	0.00897535	FOXA2_FOXJ3	ENST00000486220.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr5_-_58571935_58571951	0.0088029	FOXA2_FOXJ3	ENST00000503258.1|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr7_+_62809239_62809239	0.00875158	FOXA2_FOXJ3	ENST00000456890.1|AC006455.1|ENSG00000230000.1|AC006455.1
hg19_v2_chr8_+_48920960_48921011	0.00852467	FOXA2_FOXJ3	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr4_+_15341442_15341589	0.00845209	FOXA2_FOXJ3	ENST00000397700.2|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7 	ENST00000295297.4|C1QTNF7|ENSG00000163145.8|C1q and tumor necrosis factor related protein 7
hg19_v2_chr4_-_76928641_76928668	0.00823955	FOXA2_FOXJ3	ENST00000264888.5|CXCL9|ENSG00000138755.5|chemokine (C-X-C motif) ligand 9
hg19_v2_chr10_-_131762105_131762105	0.00818736	FOXA2_FOXJ3	ENST00000368648.3|EBF3|ENSG00000108001.9|early B-cell factor 3 	ENST00000355311.5|EBF3|ENSG00000108001.9|early B-cell factor 3
hg19_v2_chr12_-_71031220_71031229	0.00817442	FOXA2_FOXJ3	ENST00000334414.6|PTPRB|ENSG00000127329.10|protein tyrosine phosphatase, receptor type, B
hg19_v2_chr14_+_23340822_23341004	0.00792916	FOXA2_FOXJ3	ENST00000359591.4|LRP10|ENSG00000197324.4|low density lipoprotein receptor-related protein 10
hg19_v2_chr5_+_71616188_71616230	0.00790939	FOXA2_FOXJ3	ENST00000380639.5|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000543322.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000503868.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000510676.2|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000536805.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2
hg19_v2_chr3_+_186692745_186692824	0.00789476	FOXA2_FOXJ3	ENST00000438590.1|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr9_+_74729511_74729525	0.00789431	FOXA2_FOXJ3	ENST00000545168.1|GDA|ENSG00000119125.12|guanine deaminase
hg19_v2_chr2_-_180427304_180427323	0.00779854	FOXA2_FOXJ3	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr15_-_76352069_76352145	0.00779697	FOXA2_FOXJ3	ENST00000305435.10|NRG4|ENSG00000169752.12|neuregulin 4 	ENST00000563910.1|NRG4|ENSG00000169752.12|neuregulin 4
hg19_v2_chr1_-_40562908_40562931	0.00779083	FOXA2_FOXJ3	ENST00000527311.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000449045.2|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1 	ENST00000372779.4|PPT1|ENSG00000131238.12|palmitoyl-protein thioesterase 1
hg19_v2_chr10_+_7745303_7745363	0.00769152	FOXA2_FOXJ3	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr9_+_21440440_21440440	0.00765233	FOXA2_FOXJ3	ENST00000276927.1|IFNA1|ENSG00000197919.3|interferon, alpha 1
hg19_v2_chr19_-_4902877_4902887	0.00763668	FOXA2_FOXJ3	ENST00000381781.2|ARRDC5|ENSG00000205784.2|arrestin domain containing 5
hg19_v2_chr13_-_103451307_103451380	0.00760582	FOXA2_FOXJ3	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr5_-_88120151_88120177	0.0075252	FOXA2_FOXJ3	ENST00000506716.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr6_+_146350622_146350749	0.00732327	FOXA2_FOXJ3	ENST00000507907.1|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1
hg19_v2_chr13_-_61989655_61989655	0.00730538	FOXA2_FOXJ3	ENST00000409204.4|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr15_-_74658493_74658504	0.00729323	FOXA2_FOXJ3	ENST00000419019.2|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1 	ENST00000569662.1|CYP11A1|ENSG00000140459.13|cytochrome P450, family 11, subfamily A, polypeptide 1
hg19_v2_chr3_+_154801678_154801733	0.00727173	FOXA2_FOXJ3	ENST00000462837.1|MME|ENSG00000196549.6|membrane metallo-endopeptidase
hg19_v2_chr9_+_27109133_27109187	0.00725209	FOXA2_FOXJ3	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr7_-_6098770_6098861	0.00721819	FOXA2_FOXJ3	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr2_+_166095898_166095940	0.00717429	FOXA2_FOXJ3	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr6_-_131949200_131949299	0.00714627	FOXA2_FOXJ3	ENST00000539158.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368058.1|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr10_-_49482907_49482941	0.00712522	FOXA2_FOXJ3	ENST00000374201.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2 	ENST00000407470.4|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chrX_-_41449204_41449229	0.00710337	FOXA2_FOXJ3	ENST00000378179.3|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr2_+_109204743_109204855	0.00703186	FOXA2_FOXJ3	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_172389821_172389833	0.006945	FOXA2_FOXJ3	ENST00000367727.4|C1orf105|ENSG00000180999.6|chromosome 1 open reading frame 105
hg19_v2_chr10_+_111967345_111967442	0.00687366	FOXA2_FOXJ3	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr6_+_146350267_146350419	0.00684373	FOXA2_FOXJ3	ENST00000355289.4|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1 	ENST00000282753.1|GRM1|ENSG00000152822.9|glutamate receptor, metabotropic 1
hg19_v2_chr7_-_68895857_68895870	0.00673343	FOXA2_FOXJ3	ENST00000421513.1|RP11-3P22.2|ENSG00000225718.1|RP11-3P22.2
hg19_v2_chr5_+_140044261_140044464	0.00663736	FOXA2_FOXJ3	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr14_-_90798273_90798323	0.00662165	FOXA2_FOXJ3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr7_+_80255472_80255507	0.00655331	FOXA2_FOXJ3	ENST00000428497.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr12_+_48516463_48516503	0.0065004	FOXA2_FOXJ3	ENST00000546465.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr18_-_31628558_31628558	0.00640388	FOXA2_FOXJ3	ENST00000535384.1|NOL4|ENSG00000101746.11|nucleolar protein 4
hg19_v2_chr14_+_56078695_56078784	0.00639268	FOXA2_FOXJ3	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr1_+_221054411_221054411	0.00621418	FOXA2_FOXJ3	ENST00000427693.1|HLX|ENSG00000136630.11|H2.0-like homeobox
hg19_v2_chr2_+_27665232_27665286	0.00621293	FOXA2_FOXJ3	ENST00000543753.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3 	ENST00000288873.3|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr12_+_53836339_53836474	0.00597768	FOXA2_FOXJ3	ENST00000549135.1|PRR13|ENSG00000205352.6|proline rich 13
hg19_v2_chr16_+_24857162_24857302	0.00586278	FOXA2_FOXJ3	ENST00000347898.3|SLC5A11|ENSG00000158865.8|solute carrier family 5 (sodium/inositol cotransporter), member 11
hg19_v2_chr3_-_189838670_189838718	0.00582665	FOXA2_FOXJ3	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr1_+_18958008_18958023	0.00577986	FOXA2_FOXJ3	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr10_-_28623368_28623415	0.00573397	FOXA2_FOXJ3	ENST00000441595.2|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr7_-_66460563_66460605	0.00568024	FOXA2_FOXJ3	ENST00000246868.2|SBDS|ENSG00000126524.5|Shwachman-Bodian-Diamond syndrome
hg19_v2_chr11_-_6790286_6790286	0.00552568	FOXA2_FOXJ3	ENST00000338569.2|OR2AG2|ENSG00000188124.2|olfactory receptor, family 2, subfamily AG, member 2
hg19_v2_chr19_+_57640011_57640011	0.00545959	FOXA2_FOXJ3	ENST00000598197.1|USP29|ENSG00000131864.6|ubiquitin specific peptidase 29
hg19_v2_chr19_-_13900972_13900972	0.00543111	FOXA2_FOXJ3	ENST00000397557.1|AC008686.1|ENSG00000214109.3|Uncharacterized protein
hg19_v2_chr5_+_176853702_176853855	0.00542461	FOXA2_FOXJ3	ENST00000507633.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000393576.3|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000355958.5|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000528793.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6 	ENST00000512684.1|GRK6|ENSG00000198055.6|G protein-coupled receptor kinase 6
hg19_v2_chr12_+_54892550_54892591	0.00533581	FOXA2_FOXJ3	ENST00000545638.2|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr12_+_32832203_32832270	0.00533358	FOXA2_FOXJ3	ENST00000553257.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000549701.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000358214.5|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000266481.6|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000551476.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000550154.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000547312.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000414834.2|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000381000.4|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000548750.1|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr1_+_144811744_144811748	0.00530372	FOXA2_FOXJ3	ENST00000338347.4|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9 	ENST00000440491.2|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9 	ENST00000375552.4|NBPF9|ENSG00000168614.13|neuroblastoma breakpoint family, member 9
hg19_v2_chr7_-_30008849_30008887	0.00505502	FOXA2_FOXJ3	ENST00000409497.1|SCRN1|ENSG00000136193.12|secernin 1
hg19_v2_chr9_+_139702363_139702413	0.00505203	FOXA2_FOXJ3	ENST00000371663.4|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6 	ENST00000371671.4|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6 	ENST00000311502.7|RABL6|ENSG00000196642.11|RAB, member RAS oncogene family-like 6
hg19_v2_chr5_+_79703823_79703845	0.00503772	FOXA2_FOXJ3	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr8_-_38008783_38008783	0.00492626	FOXA2_FOXJ3	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr20_+_48429233_48429257	0.00487107	FOXA2_FOXJ3	ENST00000417961.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr3_-_48647470_48647470	0.00477949	FOXA2_FOXJ3	ENST00000203407.5|UQCRC1|ENSG00000010256.6|ubiquinol-cytochrome c reductase core protein I
hg19_v2_chr14_+_102276132_102276178	0.00474759	FOXA2_FOXJ3	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr5_+_140729649_140729828	0.00461042	FOXA2_FOXJ3	ENST00000523390.1|PCDHGB1|ENSG00000254221.1|protocadherin gamma subfamily B, 1
hg19_v2_chr6_+_108882069_108882087	0.00456474	FOXA2_FOXJ3	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr6_-_13621126_13621126	0.00451193	FOXA2_FOXJ3	ENST00000600057.1|AL441883.1|ENSG00000268059.1|Uncharacterized protein
hg19_v2_chr1_+_172745006_172745045	0.00438039	FOXA2_FOXJ3	ENST00000432694.2|RP1-15D23.2|ENSG00000224228.2|RP1-15D23.2
hg19_v2_chr4_+_74576019_74576088	0.00436256	FOXA2_FOXJ3	ENST00000436089.1|AC112518.3|ENSG00000228277.1|AC112518.3
hg19_v2_chr2_-_27886676_27886714	0.0043428	FOXA2_FOXJ3	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr2_-_161056802_161056815	0.00432076	FOXA2_FOXJ3	ENST00000283249.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409872.1|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr3_-_49066811_49066851	0.00425545	FOXA2_FOXJ3	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr10_+_7745232_7745295	0.00420003	FOXA2_FOXJ3	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr8_+_36641842_36641902	0.00419252	FOXA2_FOXJ3	ENST00000523973.1|KCNU1|ENSG00000215262.3|potassium channel, subfamily U, member 1 	ENST00000399881.3|KCNU1|ENSG00000215262.3|potassium channel, subfamily U, member 1
hg19_v2_chr1_+_207669613_207669686	0.00412539	FOXA2_FOXJ3	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr6_-_130536774_130536792	0.0040621	FOXA2_FOXJ3	ENST00000532763.1|SAMD3|ENSG00000164483.12|sterile alpha motif domain containing 3
hg19_v2_chr11_+_102217936_102218035	0.00394551	FOXA2_FOXJ3	ENST00000532832.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000530675.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000533742.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000227758.2|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000532672.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000531259.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2 	ENST00000527465.1|BIRC2|ENSG00000110330.4|baculoviral IAP repeat containing 2
hg19_v2_chr5_+_140552218_140552244	0.00380461	FOXA2_FOXJ3	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr12_-_51718436_51718458	0.00368024	FOXA2_FOXJ3	ENST00000544402.1|BIN2|ENSG00000110934.6|bridging integrator 2
hg19_v2_chr11_+_22696314_22696332	0.00348498	FOXA2_FOXJ3	ENST00000532398.1|GAS2|ENSG00000148935.6|growth arrest-specific 2 	ENST00000433790.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr3_+_169539710_169539710	0.00326688	FOXA2_FOXJ3	ENST00000340806.6|LRRIQ4|ENSG00000188306.6|leucine-rich repeats and IQ motif containing 4
hg19_v2_chr13_+_78315295_78315337	0.00322501	FOXA2_FOXJ3	ENST00000351546.3|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr1_-_203274418_203274461	0.00315122	FOXA2_FOXJ3	ENST00000457348.1|RP11-134P9.1|ENSG00000233791.1|long intergenic non-protein coding RNA 1136
hg19_v2_chr1_-_149982624_149982719	0.00310502	FOXA2_FOXJ3	ENST00000417191.1|OTUD7B|ENSG00000163113.10|OTU domain containing 7B 	ENST00000369135.4|OTUD7B|ENSG00000163113.10|OTU domain containing 7B
hg19_v2_chr19_+_52839490_52839508	0.00281946	FOXA2_FOXJ3	ENST00000321287.8|ZNF610|ENSG00000167554.10|zinc finger protein 610
hg19_v2_chr4_+_86749045_86749070	0.00275276	FOXA2_FOXJ3	ENST00000514229.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr12_+_76653682_76653687	0.00269126	FOXA2_FOXJ3	ENST00000553247.1|RP11-54A9.1|ENSG00000257219.1|RP11-54A9.1
hg19_v2_chr12_+_21679220_21679252	0.00252666	FOXA2_FOXJ3	ENST00000256969.2|C12orf39|ENSG00000134548.5|chromosome 12 open reading frame 39
hg19_v2_chr2_-_170430277_170430361	0.00243268	FOXA2_FOXJ3	ENST00000438035.1|FASTKD1|ENSG00000138399.13|FAST kinase domains 1 	ENST00000453929.2|FASTKD1|ENSG00000138399.13|FAST kinase domains 1
hg19_v2_chr2_-_86422523_86422595	0.00240812	FOXA2_FOXJ3	ENST00000442664.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000409051.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial 	ENST00000449247.2|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial
hg19_v2_chr12_-_118490217_118490269	0.00229308	FOXA2_FOXJ3	ENST00000542304.1|WSB2|ENSG00000176871.4|WD repeat and SOCS box containing 2
hg19_v2_chr2_-_161056762_161056799	0.00225703	FOXA2_FOXJ3	ENST00000428609.2|ITGB6|ENSG00000115221.6|integrin, beta 6 	ENST00000409967.2|ITGB6|ENSG00000115221.6|integrin, beta 6
hg19_v2_chr2_+_135809835_135809874	0.00225358	FOXA2_FOXJ3	ENST00000264158.8|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000539493.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000442034.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic) 	ENST00000425393.1|RAB3GAP1|ENSG00000115839.13|RAB3 GTPase activating protein subunit 1 (catalytic)
hg19_v2_chr16_-_21877629_21877629	0.00219855	FOXA2_FOXJ3	ENST00000544693.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr15_-_59041768_59041950	0.00219608	FOXA2_FOXJ3	ENST00000402627.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000396140.2|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000559053.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10 	ENST00000561288.1|ADAM10|ENSG00000137845.10|ADAM metallopeptidase domain 10
hg19_v2_chr7_-_115670804_115670867	0.0015205	FOXA2_FOXJ3	ENST00000320239.7|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr17_+_22022437_22022437	0.00148585	FOXA2_FOXJ3	ENST00000540040.1|MTRNR2L1|ENSG00000256618.1|MT-RNR2-like 1
hg19_v2_chr5_-_218251_218330	0.00140266	FOXA2_FOXJ3	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr16_+_5121814_5121855	0.00131638	FOXA2_FOXJ3	ENST00000262374.5|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 	ENST00000586840.1|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
hg19_v2_chr10_-_21186144_21186247	0.00122612	FOXA2_FOXJ3	ENST00000377119.1|NEBL|ENSG00000078114.14|nebulette
hg19_v2_chrX_+_198129_198173	0.00112247	FOXA2_FOXJ3	ENST00000381663.3|PLCXD1|ENSG00000182378.8|phosphatidylinositol-specific phospholipase C, X domain containing 1
hg19_v2_chr2_+_120770645_120770669	0.000991548	FOXA2_FOXJ3	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr5_-_159846399_159846412	0.000974589	FOXA2_FOXJ3	ENST00000297151.4|SLU7|ENSG00000164609.5|SLU7 splicing factor homolog (S. cerevisiae)
hg19_v2_chr10_-_75168071_75168165	0.00095906	FOXA2_FOXJ3	ENST00000394847.3|ANXA7|ENSG00000138279.11|annexin A7
hg19_v2_chr7_-_76829125_76829143	0.000929072	FOXA2_FOXJ3	ENST00000248598.5|FGL2|ENSG00000127951.5|fibrinogen-like 2
hg19_v2_chr2_+_102413726_102413769	0.00089701	FOXA2_FOXJ3	ENST00000350878.4|MAP4K4|ENSG00000071054.11|mitogen-activated protein kinase kinase kinase kinase 4
hg19_v2_chr2_-_3521518_3521518	0.000883079	FOXA2_FOXJ3	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr14_-_90798418_90798481	0.00085582	FOXA2_FOXJ3	ENST00000354366.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr1_+_52082751_52082781	0.000786888	FOXA2_FOXJ3	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr10_-_32217717_32217781	0.000748825	FOXA2_FOXJ3	ENST00000396144.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375245.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000344936.2|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375250.5|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12
hg19_v2_chr8_-_80993010_80993073	0.000678854	FOXA2_FOXJ3	ENST00000537855.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000520527.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000517427.1|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000448733.2|TPD52|ENSG00000076554.11|tumor protein D52 	ENST00000379097.3|TPD52|ENSG00000076554.11|tumor protein D52
hg19_v2_chrX_+_119029800_119029936	0.000590089	FOXA2_FOXJ3	ENST00000371431.3|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371423.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371425.4|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000394594.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14
hg19_v2_chr2_+_181988560_181988577	0.000430466	FOXA2_FOXJ3	ENST00000424170.1|AC104820.2|ENSG00000234663.1|AC104820.2	ENST00000435411.1|AC104820.2|ENSG00000234663.1|AC104820.2
hg19_v2_chr1_-_177939041_177939053	0.000400393	FOXA2_FOXJ3	ENST00000308284.6|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr5_+_162932554_162932661	0.000392046	FOXA2_FOXJ3	ENST00000321757.6|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000421814.2|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000518095.1|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr11_-_94226964_94227025	0.000370032	FOXA2_FOXJ3	ENST00000538923.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000540013.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000407439.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000393241.4|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr6_+_97372596_97372644	0.000322539	FOXA2_FOXJ3	ENST00000369261.4|KLHL32|ENSG00000186231.12|kelch-like family member 32
hg19_v2_chr5_-_55529115_55529186	0.000115524	FOXA2_FOXJ3	ENST00000513241.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55 	ENST00000341048.4|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr3_-_20053741_20053822	8.41423e-05	FOXA2_FOXJ3	ENST00000389050.4|PP2D1|ENSG00000183977.9|protein phosphatase 2C-like domain containing 1
hg19_v2_chr1_+_15668240_15668263	6.15306e-05	FOXA2_FOXJ3	ENST00000444385.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr12_-_102591604_102591623	3.9342e-05	FOXA2_FOXJ3	ENST00000329406.4|PMCH|ENSG00000183395.4|pro-melanin-concentrating hormone
