hg19_v2_chr11_-_75062730_75062775	0.0218229	CCACAGG	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr1_-_228135599_228135640	0.0208489	CCACAGG	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr9_-_127533519_127533576	0.0193043	CCACAGG	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr12_-_50101165_50101259	0.016809	CCACAGG	ENST00000352151.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000335154.5|FMNL3|ENSG00000161791.9|formin-like 3 	ENST00000293590.5|FMNL3|ENSG00000161791.9|formin-like 3
hg19_v2_chr16_-_85722530_85722615	0.0142989	CCACAGG	ENST00000253462.3|GINS2|ENSG00000131153.4|GINS complex subunit 2 (Psf2 homolog)
hg19_v2_chr19_-_46000251_46000319	0.0135165	CCACAGG	ENST00000590526.1|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000344680.4|RTN2|ENSG00000125744.7|reticulon 2 	ENST00000245923.4|RTN2|ENSG00000125744.7|reticulon 2
hg19_v2_chr1_-_236228403_236228414	0.0132299	CCACAGG	ENST00000366595.3|NID1|ENSG00000116962.10|nidogen 1
hg19_v2_chr17_+_6918093_6918139	0.0127139	CCACAGG	ENST00000439424.2|C17orf49|ENSG00000258315.1|chromosome 17 open reading frame 49
hg19_v2_chr3_-_114790179_114790222	0.0119498	CCACAGG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr14_-_67982146_67982202	0.0112888	CCACAGG	ENST00000557779.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B 	ENST00000557006.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr1_+_36348790_36348822	0.010045	CCACAGG	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chr2_-_96811170_96811186	0.00947608	CCACAGG	ENST00000288943.4|DUSP2|ENSG00000158050.4|dual specificity phosphatase 2
hg19_v2_chr16_-_62070305_62070310	0.00898904	CCACAGG	ENST00000584337.1|CDH8|ENSG00000150394.9|cadherin 8, type 2
hg19_v2_chr22_+_30115986_30116073	0.00860279	CCACAGG	ENST00000216144.3|CABP7|ENSG00000100314.3|calcium binding protein 7
hg19_v2_chr8_-_81787006_81787031	0.00845473	CCACAGG	ENST00000327835.3|ZNF704|ENSG00000164684.9|zinc finger protein 704
hg19_v2_chr4_+_134070439_134070470	0.00822304	CCACAGG	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr15_+_64443905_64443943	0.00804249	CCACAGG	ENST00000325881.4|SNX22|ENSG00000157734.9|sorting nexin 22
hg19_v2_chr14_-_30396948_30396998	0.00775117	CCACAGG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr12_+_57943781_57943869	0.00757307	CCACAGG	ENST00000455537.2|KIF5A|ENSG00000155980.7|kinesin family member 5A 	ENST00000286452.5|KIF5A|ENSG00000155980.7|kinesin family member 5A
hg19_v2_chr9_+_37753795_37753820	0.00738857	CCACAGG	ENST00000377753.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000537911.1|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000377754.2|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae) 	ENST00000297994.3|TRMT10B|ENSG00000165275.5|tRNA methyltransferase 10 homolog B (S. cerevisiae)
hg19_v2_chr10_-_126432619_126432663	0.00723736	CCACAGG	ENST00000337318.3|FAM53B|ENSG00000189319.9|family with sequence similarity 53, member B
hg19_v2_chr19_-_10341948_10341965	0.00717453	CCACAGG	ENST00000590320.1|S1PR2|ENSG00000267534.1|sphingosine-1-phosphate receptor 2 	ENST00000592342.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000588952.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr19_-_14316980_14316999	0.00707973	CCACAGG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr20_+_37554955_37555067	0.00698585	CCACAGG	ENST00000217429.4|FAM83D|ENSG00000101447.9|family with sequence similarity 83, member D
hg19_v2_chr1_-_110284384_110284384	0.00695795	CCACAGG	ENST00000540225.1|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr19_+_8455077_8455083	0.00692817	CCACAGG	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr20_+_306221_306239	0.00677897	CCACAGG	ENST00000342665.2|SOX12|ENSG00000177732.6|SRY (sex determining region Y)-box 12
hg19_v2_chr17_+_6916957_6917052	0.00671604	CCACAGG	ENST00000547302.2|RNASEK-C17orf49|ENSG00000161939.14|RNASEK-C17orf49 readthrough
hg19_v2_chr20_-_50384864_50384943	0.00644267	CCACAGG	ENST00000311637.5|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A 	ENST00000402822.1|ATP9A|ENSG00000054793.9|ATPase, class II, type 9A
hg19_v2_chr11_+_119076745_119076792	0.00644206	CCACAGG	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr17_-_43568062_43568110	0.00624358	CCACAGG	ENST00000421073.2|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000584420.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000589780.1|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1 	ENST00000430334.3|PLEKHM1|ENSG00000225190.4|pleckstrin homology domain containing, family M (with RUN domain) member 1
hg19_v2_chr1_-_92351769_92351787	0.00619974	CCACAGG	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr3_-_50374869_50374895	0.00606707	CCACAGG	ENST00000327761.3|RASSF1|ENSG00000068028.13|Ras association (RalGDS/AF-6) domain family member 1
hg19_v2_chr2_-_42180940_42180951	0.00602751	CCACAGG	ENST00000378711.2|C2orf91|ENSG00000205086.5|chromosome 2 open reading frame 91
hg19_v2_chr10_+_69644404_69644427	0.00585477	CCACAGG	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr17_-_61523535_61523559	0.00568866	CCACAGG	ENST00000584031.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000392976.1|CYB561|ENSG00000008283.11|cytochrome b561
hg19_v2_chr12_-_56652111_56652183	0.0056541	CCACAGG	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr1_-_27816556_27816572	0.00550686	CCACAGG	ENST00000536657.1|WASF2|ENSG00000158195.6|WAS protein family, member 2
hg19_v2_chr11_+_129939779_129939801	0.00549817	CCACAGG	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr14_-_77279153_77279283	0.00548552	CCACAGG	ENST00000251089.2|ANGEL1|ENSG00000013523.5|angel homolog 1 (Drosophila)
hg19_v2_chr21_-_28338732_28338832	0.00538365	CCACAGG	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr18_+_13218769_13218792	0.00537712	CCACAGG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr20_+_44462430_44462476	0.00537215	CCACAGG	ENST00000462307.1|SNX21|ENSG00000124104.14|sorting nexin family member 21
hg19_v2_chr3_-_66551351_66551356	0.00525094	CCACAGG	ENST00000273261.3|LRIG1|ENSG00000144749.9|leucine-rich repeats and immunoglobulin-like domains 1
hg19_v2_chr12_+_94542459_94542513	0.00523547	CCACAGG	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr2_+_113033164_113033219	0.00514649	CCACAGG	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr22_-_42466782_42466856	0.00509833	CCACAGG	ENST00000396398.3|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha- 	ENST00000403363.1|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha- 	ENST00000402937.1|NAGA|ENSG00000198951.7|N-acetylgalactosaminidase, alpha-
hg19_v2_chr19_+_41816053_41816178	0.00508575	CCACAGG	ENST00000269967.3|CCDC97|ENSG00000142039.3|coiled-coil domain containing 97
hg19_v2_chr15_+_80696666_80696700	0.00505245	CCACAGG	ENST00000303329.4|ARNT2|ENSG00000172379.14|aryl-hydrocarbon receptor nuclear translocator 2
hg19_v2_chr3_+_14989076_14989113	0.00501782	CCACAGG	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr17_-_62502639_62502849	0.00500435	CCACAGG	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr14_-_95786200_95786257	0.00496027	CCACAGG	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chr9_-_14314066_14314075	0.00495276	CCACAGG	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr22_+_29279552_29279586	0.00493287	CCACAGG	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr12_+_74931551_74931656	0.00484275	CCACAGG	ENST00000519948.2|ATXN7L3B|ENSG00000253719.2|ataxin 7-like 3B
hg19_v2_chr3_-_171178157_171178225	0.00481267	CCACAGG	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr1_+_27153173_27153230	0.00479071	CCACAGG	ENST00000374142.4|ZDHHC18|ENSG00000204160.7|zinc finger, DHHC-type containing 18
hg19_v2_chr16_+_70332956_70333130	0.00474823	CCACAGG	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr1_+_118148556_118148681	0.00474105	CCACAGG	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr11_+_73087309_73087452	0.0046782	CCACAGG	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr13_+_52158610_52158654	0.00453739	CCACAGG	ENST00000298125.5|WDFY2|ENSG00000139668.7|WD repeat and FYVE domain containing 2
hg19_v2_chr1_-_155211017_155211062	0.00451967	CCACAGG	ENST00000536770.1|GBA|ENSG00000177628.11|glucosidase, beta, acid 	ENST00000368373.3|GBA|ENSG00000177628.11|glucosidase, beta, acid
hg19_v2_chr6_-_53213780_53213947	0.004496	CCACAGG	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr17_+_42422637_42422655	0.00449139	CCACAGG	ENST00000053867.3|GRN|ENSG00000030582.12|granulin 	ENST00000588143.1|GRN|ENSG00000030582.12|granulin
hg19_v2_chr14_+_102786063_102786112	0.00446927	CCACAGG	ENST00000442396.2|ZNF839|ENSG00000022976.11|zinc finger protein 839 	ENST00000262236.5|ZNF839|ENSG00000022976.11|zinc finger protein 839
hg19_v2_chr7_+_140774032_140774032	0.00442839	CCACAGG	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr9_-_95432536_95432560	0.00436845	CCACAGG	ENST00000287996.3|IPPK|ENSG00000127080.5|inositol 1,3,4,5,6-pentakisphosphate 2-kinase
hg19_v2_chr12_+_62654119_62654142	0.00424934	CCACAGG	ENST00000353364.3|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000549523.1|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15 	ENST00000280377.5|USP15|ENSG00000135655.9|ubiquitin specific peptidase 15
hg19_v2_chr1_-_21671968_21672009	0.00422001	CCACAGG	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chrX_-_124097620_124097666	0.00418495	CCACAGG	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr20_+_1875110_1875154	0.00412287	CCACAGG	ENST00000400068.3|SIRPA|ENSG00000198053.7|signal-regulatory protein alpha
hg19_v2_chr17_+_44928946_44928953	0.00404486	CCACAGG	ENST00000290015.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B 	ENST00000393461.2|WNT9B|ENSG00000158955.6|wingless-type MMTV integration site family, member 9B
hg19_v2_chr9_+_116638562_116638606	0.0039498	CCACAGG	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr14_+_23790655_23790680	0.00392506	CCACAGG	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr17_-_4167142_4167281	0.00390176	CCACAGG	ENST00000570535.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000574367.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000341657.4|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1 	ENST00000433651.1|ANKFY1|ENSG00000185722.12|ankyrin repeat and FYVE domain containing 1
hg19_v2_chr12_+_121837844_121837892	0.00387979	CCACAGG	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr5_+_149109825_149109907	0.00381589	CCACAGG	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chrX_-_134186144_134186228	0.0037795	CCACAGG	ENST00000370775.2|FAM127B|ENSG00000203950.6|family with sequence similarity 127, member B
hg19_v2_chr17_-_42298331_42298361	0.00365668	CCACAGG	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr2_-_166930131_166930149	0.0036194	CCACAGG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr20_-_43280361_43280392	0.00360649	CCACAGG	ENST00000372874.4|ADA|ENSG00000196839.8|adenosine deaminase
hg19_v2_chrX_+_118108571_118108589	0.00359725	CCACAGG	ENST00000304778.7|LONRF3|ENSG00000175556.12|LON peptidase N-terminal domain and ring finger 3
hg19_v2_chr12_+_50898881_50898907	0.00353365	CCACAGG	ENST00000301180.5|DIP2B|ENSG00000066084.8|DIP2 disco-interacting protein 2 homolog B (Drosophila)
hg19_v2_chr19_-_14629224_14629262	0.00353276	CCACAGG	ENST00000254322.2|DNAJB1|ENSG00000132002.3|DnaJ (Hsp40) homolog, subfamily B, member 1
hg19_v2_chr17_-_79885576_79885624	0.0034849	CCACAGG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr5_+_152870106_152870188	0.0034773	CCACAGG	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr2_-_239112347_239112370	0.00344106	CCACAGG	ENST00000457149.1|ILKAP|ENSG00000132323.4|integrin-linked kinase-associated serine/threonine phosphatase 	ENST00000254654.3|ILKAP|ENSG00000132323.4|integrin-linked kinase-associated serine/threonine phosphatase
hg19_v2_chr7_+_94285637_94285689	0.00343258	CCACAGG	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr14_+_23776024_23776105	0.00343187	CCACAGG	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr5_+_102594403_102594445	0.00342642	CCACAGG	ENST00000319933.2|C5orf30|ENSG00000181751.5|chromosome 5 open reading frame 30
hg19_v2_chr10_+_11206925_11206993	0.00339022	CCACAGG	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr16_+_31085714_31085783	0.0033749	CCACAGG	ENST00000300850.5|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000564189.1|ZNF646|ENSG00000167395.10|zinc finger protein 646 	ENST00000428260.1|ZNF646|ENSG00000167395.10|zinc finger protein 646
hg19_v2_chr15_+_40733387_40733416	0.00333822	CCACAGG	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr5_-_178017355_178017556	0.00332852	CCACAGG	ENST00000390654.3|COL23A1|ENSG00000050767.11|collagen, type XXIII, alpha 1
hg19_v2_chr17_+_61851157_61851244	0.00325649	CCACAGG	ENST00000578681.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42 	ENST00000583590.1|DDX42|ENSG00000198231.8|DEAD (Asp-Glu-Ala-Asp) box helicase 42
hg19_v2_chr6_-_30585009_30585028	0.00324644	CCACAGG	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr3_+_85008089_85008189	0.00322472	CCACAGG	ENST00000383699.3|CADM2|ENSG00000175161.9|cell adhesion molecule 2
hg19_v2_chr1_+_113010056_113010056	0.0032116	CCACAGG	ENST00000369686.5|WNT2B|ENSG00000134245.13|wingless-type MMTV integration site family, member 2B
hg19_v2_chr1_-_109940550_109940573	0.00320319	CCACAGG	ENST00000256637.6|SORT1|ENSG00000134243.7|sortilin 1
hg19_v2_chr3_-_44519131_44519186	0.00317669	CCACAGG	ENST00000425708.2|ZNF445|ENSG00000185219.11|zinc finger protein 445 	ENST00000396077.2|ZNF445|ENSG00000185219.11|zinc finger protein 445
hg19_v2_chr5_-_175964366_175964429	0.00317344	CCACAGG	ENST00000274811.4|RNF44|ENSG00000146083.7|ring finger protein 44
hg19_v2_chr17_+_73452545_73452685	0.00317054	CCACAGG	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chr17_+_61699766_61699826	0.00316861	CCACAGG	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr17_+_60704762_60704762	0.00312826	CCACAGG	ENST00000303375.5|MRC2|ENSG00000011028.9|mannose receptor, C type 2
hg19_v2_chr17_+_47865917_47866068	0.00305242	CCACAGG	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr16_+_3019246_3019304	0.00301533	CCACAGG	ENST00000318782.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV 	ENST00000293978.8|PAQR4|ENSG00000162073.9|progestin and adipoQ receptor family member IV
hg19_v2_chr7_+_100136811_100136882	0.00299418	CCACAGG	ENST00000300176.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2 	ENST00000262935.4|AGFG2|ENSG00000106351.8|ArfGAP with FG repeats 2
hg19_v2_chr12_+_20522179_20522203	0.00298488	CCACAGG	ENST00000359062.3|PDE3A|ENSG00000172572.6|phosphodiesterase 3A, cGMP-inhibited
hg19_v2_chr17_-_33446820_33446899	0.00291417	CCACAGG	ENST00000592577.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000590016.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000345365.6|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000360276.3|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000357906.3|RAD51D|ENSG00000185379.16|RAD51 paralog D
hg19_v2_chr15_+_89631381_89631391	0.0028754	CCACAGG	ENST00000352732.5|ABHD2|ENSG00000140526.12|abhydrolase domain containing 2
hg19_v2_chr11_+_73498898_73498965	0.00286111	CCACAGG	ENST00000535529.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000497094.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000411840.2|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000535277.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000398483.3|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48 	ENST00000542303.1|MRPL48|ENSG00000175581.9|mitochondrial ribosomal protein L48
hg19_v2_chr9_+_133454943_133455020	0.00281608	CCACAGG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr2_-_96931679_96931756	0.00280816	CCACAGG	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr6_-_34664612_34664642	0.00280808	CCACAGG	ENST00000374023.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106 	ENST00000374026.3|C6orf106|ENSG00000196821.5|chromosome 6 open reading frame 106
hg19_v2_chr19_-_44100275_44100302	0.00279448	CCACAGG	ENST00000422989.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q 	ENST00000598324.1|IRGQ|ENSG00000167378.4|immunity-related GTPase family, Q
hg19_v2_chr11_-_64901978_64902009	0.00275561	CCACAGG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr16_+_11038345_11038366	0.00275157	CCACAGG	ENST00000409790.1|CLEC16A|ENSG00000038532.10|C-type lectin domain family 16, member A
hg19_v2_chr19_-_18632861_18632937	0.00270413	CCACAGG	ENST00000262809.4|ELL|ENSG00000105656.8|elongation factor RNA polymerase II
hg19_v2_chr10_-_75634260_75634321	0.00266787	CCACAGG	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr7_+_65338230_65338293	0.00264097	CCACAGG	ENST00000360768.3|VKORC1L1|ENSG00000196715.5|vitamin K epoxide reductase complex, subunit 1-like 1
hg19_v2_chr1_+_18958008_18958023	0.00263471	CCACAGG	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr1_-_116383738_116383752	0.002629	CCACAGG	ENST00000320238.3|NHLH2|ENSG00000177551.5|nescient helix loop helix 2
hg19_v2_chr18_+_21693306_21693322	0.00262475	CCACAGG	ENST00000540918.2|TTC39C|ENSG00000168234.8|tetratricopeptide repeat domain 39C
hg19_v2_chr16_-_85833160_85833214	0.00257648	CCACAGG	ENST00000435200.2|EMC8|ENSG00000131148.4|ER membrane protein complex subunit 8
hg19_v2_chr3_-_119813264_119813272	0.00255382	CCACAGG	ENST00000264235.8|GSK3B|ENSG00000082701.10|glycogen synthase kinase 3 beta
hg19_v2_chr11_-_82782861_82782949	0.00252036	CCACAGG	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr17_-_39890893_39890898	0.0025164	CCACAGG	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr5_+_149887672_149887698	0.00251365	CCACAGG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr9_-_100684845_100684856	0.0024424	CCACAGG	ENST00000375119.3|C9orf156|ENSG00000136932.9|chromosome 9 open reading frame 156
hg19_v2_chr17_+_7452189_7452208	0.00240055	CCACAGG	ENST00000293825.6|TNFSF12|ENSG00000239697.6|tumor necrosis factor (ligand) superfamily, member 12
hg19_v2_chr7_+_38217818_38217882	0.00238535	CCACAGG	ENST00000009041.7|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000544203.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like 	ENST00000434197.1|STARD3NL|ENSG00000010270.9|STARD3 N-terminal like
hg19_v2_chr14_+_100705322_100705360	0.00237377	CCACAGG	ENST00000262238.4|YY1|ENSG00000100811.6|YY1 transcription factor
hg19_v2_chr20_+_47835884_47835920	0.00236137	CCACAGG	ENST00000371764.4|DDX27|ENSG00000124228.10|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
hg19_v2_chr19_-_47616992_47617011	0.00235133	CCACAGG	ENST00000253048.5|ZC3H4|ENSG00000130749.5|zinc finger CCCH-type containing 4
hg19_v2_chr15_+_91411810_91411828	0.00232591	CCACAGG	ENST00000268171.3|FURIN|ENSG00000140564.6|furin (paired basic amino acid cleaving enzyme)
hg19_v2_chr5_+_102201430_102201478	0.00230935	CCACAGG	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr7_-_83824169_83824217	0.00226361	CCACAGG	ENST00000265362.4|SEMA3A|ENSG00000075213.6|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
hg19_v2_chr5_+_177631497_177631508	0.00225947	CCACAGG	ENST00000358344.3|HNRNPAB|ENSG00000197451.6|heterogeneous nuclear ribonucleoprotein A/B
hg19_v2_chr19_+_38397839_38397932	0.00224763	CCACAGG	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr13_+_22245522_22245676	0.00219507	CCACAGG	ENST00000382353.5|FGF9|ENSG00000102678.6|fibroblast growth factor 9
hg19_v2_chr18_-_53255766_53255860	0.00218001	CCACAGG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr20_+_10199468_10199516	0.00217266	CCACAGG	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr5_-_137090028_137090075	0.00217141	CCACAGG	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr5_+_143584814_143584840	0.00216237	CCACAGG	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr14_-_21905395_21905419	0.00215917	CCACAGG	ENST00000430710.3|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8 	ENST00000553283.1|CHD8|ENSG00000100888.8|chromodomain helicase DNA binding protein 8
hg19_v2_chr1_+_178694300_178694346	0.00215819	CCACAGG	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr3_-_170303845_170303869	0.00215415	CCACAGG	ENST00000231706.5|SLC7A14|ENSG00000013293.5|solute carrier family 7, member 14
hg19_v2_chr6_-_34113856_34113868	0.00214842	CCACAGG	ENST00000538487.2|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr12_+_57916466_57916527	0.00213093	CCACAGG	ENST00000355673.3|MBD6|ENSG00000166987.10|methyl-CpG binding domain protein 6
hg19_v2_chr14_+_71108460_71108508	0.00208736	CCACAGG	ENST00000256367.2|TTC9|ENSG00000133985.2|tetratricopeptide repeat domain 9
hg19_v2_chr9_+_104296122_104296161	0.00203994	CCACAGG	ENST00000389120.3|RNF20|ENSG00000155827.7|ring finger protein 20, E3 ubiquitin protein ligase
hg19_v2_chr2_-_40679186_40679297	0.00200174	CCACAGG	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr6_-_130031358_130031378	0.00199586	CCACAGG	ENST00000368149.2|ARHGAP18|ENSG00000146376.6|Rho GTPase activating protein 18
hg19_v2_chr17_-_21117902_21117937	0.00198674	CCACAGG	ENST00000317635.5|TMEM11|ENSG00000178307.5|transmembrane protein 11
hg19_v2_chr1_-_166135952_166136001	0.0019733	CCACAGG	ENST00000354422.3|FAM78B|ENSG00000188859.5|family with sequence similarity 78, member B
hg19_v2_chr14_+_56585048_56585150	0.001948	CCACAGG	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chrX_+_100474711_100474758	0.00194798	CCACAGG	ENST00000402866.1|DRP2|ENSG00000102385.8|dystrophin related protein 2
hg19_v2_chr11_+_118754475_118754552	0.00193522	CCACAGG	ENST00000292174.4|CXCR5|ENSG00000160683.4|chemokine (C-X-C motif) receptor 5
hg19_v2_chr14_-_74253948_74253964	0.00191833	CCACAGG	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chrX_+_40944871_40944888	0.00191443	CCACAGG	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr1_-_225840747_225840860	0.00190294	CCACAGG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr11_-_130786400_130786407	0.0018708	CCACAGG	ENST00000265909.4|SNX19|ENSG00000120451.6|sorting nexin 19
hg19_v2_chr1_+_16010779_16010885	0.00185791	CCACAGG	ENST00000375799.3|PLEKHM2|ENSG00000116786.7|pleckstrin homology domain containing, family M (with RUN domain) member 2 	ENST00000375793.2|PLEKHM2|ENSG00000116786.7|pleckstrin homology domain containing, family M (with RUN domain) member 2
hg19_v2_chr10_+_99400443_99400497	0.0018112	CCACAGG	ENST00000370631.3|PI4K2A|ENSG00000155252.12|phosphatidylinositol 4-kinase type 2 alpha
hg19_v2_chr19_+_55738587_55738587	0.0017784	CCACAGG	ENST00000598855.1|AC010327.2|ENSG00000269808.1|Uncharacterized protein; cDNA FLJ45856 fis, clone OCBBF2025631
hg19_v2_chr15_+_77712993_77713081	0.00175825	CCACAGG	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr7_-_138666053_138666146	0.00174867	CCACAGG	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr17_+_56160768_56160786	0.00172009	CCACAGG	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr10_+_63661053_63661079	0.00169823	CCACAGG	ENST00000279873.7|ARID5B|ENSG00000150347.10|AT rich interactive domain 5B (MRF1-like)
hg19_v2_chr2_-_166060571_166060582	0.00169016	CCACAGG	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr11_+_48002076_48002132	0.00166755	CCACAGG	ENST00000418331.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J 	ENST00000440289.2|PTPRJ|ENSG00000149177.8|protein tyrosine phosphatase, receptor type, J
hg19_v2_chr6_+_43211418_43211418	0.00163707	CCACAGG	ENST00000259750.4|TTBK1|ENSG00000146216.7|tau tubulin kinase 1
hg19_v2_chr5_+_32711419_32711540	0.00161929	CCACAGG	ENST00000265074.8|NPR3|ENSG00000113389.11|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)
hg19_v2_chr3_+_51428704_51428737	0.00158905	CCACAGG	ENST00000323686.4|RBM15B|ENSG00000179837.6|RNA binding motif protein 15B
hg19_v2_chr12_-_49393092_49393164	0.00158724	CCACAGG	ENST00000421952.2|DDN|ENSG00000181418.7|dendrin
hg19_v2_chr13_+_111365602_111365625	0.00153873	CCACAGG	ENST00000333219.7|ING1|ENSG00000153487.11|inhibitor of growth family, member 1
hg19_v2_chr11_-_62494821_62494953	0.0015299	CCACAGG	ENST00000301785.5|HNRNPUL2|ENSG00000214753.2|heterogeneous nuclear ribonucleoprotein U-like 2
hg19_v2_chr17_+_38296576_38296604	0.0014988	CCACAGG	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr1_+_15943995_15944014	0.00149823	CCACAGG	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr1_-_205601064_205601090	0.00148404	CCACAGG	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr1_+_203595903_203595934	0.00146595	CCACAGG	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr6_+_34433844_34433921	0.00141386	CCACAGG	ENST00000244458.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1 	ENST00000374043.2|PACSIN1|ENSG00000124507.6|protein kinase C and casein kinase substrate in neurons 1
hg19_v2_chr4_+_166794383_166794500	0.00140772	CCACAGG	ENST00000061240.2|TLL1|ENSG00000038295.3|tolloid-like 1 	ENST00000507499.1|TLL1|ENSG00000038295.3|tolloid-like 1
hg19_v2_chr12_-_42538657_42538720	0.00137179	CCACAGG	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr3_+_127771212_127771316	0.00133991	CCACAGG	ENST00000243253.3|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae) 	ENST00000481210.1|SEC61A1|ENSG00000058262.5|Sec61 alpha 1 subunit (S. cerevisiae)
hg19_v2_chr12_+_69864129_69864222	0.00129557	CCACAGG	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr9_-_33264676_33264761	0.00129423	CCACAGG	ENST00000472232.3|BAG1|ENSG00000107262.12|BCL2-associated athanogene 	ENST00000379704.2|BAG1|ENSG00000107262.12|BCL2-associated athanogene
hg19_v2_chr1_-_35395178_35395265	0.00126111	CCACAGG	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr1_-_17304771_17304825	0.00125356	CCACAGG	ENST00000375534.3|MFAP2|ENSG00000117122.9|microfibrillar-associated protein 2
hg19_v2_chr7_+_97736197_97736211	0.00125157	CCACAGG	ENST00000297293.5|LMTK2|ENSG00000164715.5|lemur tyrosine kinase 2
hg19_v2_chrX_+_23352133_23352229	0.00124789	CCACAGG	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr22_-_38669030_38669045	0.00123207	CCACAGG	ENST00000361906.3|TMEM184B|ENSG00000198792.8|transmembrane protein 184B
hg19_v2_chr8_+_77593448_77593471	0.00120265	CCACAGG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr4_-_90758227_90758379	0.00119858	CCACAGG	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr4_-_83350580_83350600	0.00116528	CCACAGG	ENST00000349655.4|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like 	ENST00000602300.1|HNRNPDL|ENSG00000152795.13|heterogeneous nuclear ribonucleoprotein D-like
hg19_v2_chr9_+_92219919_92219953	0.0011608	CCACAGG	ENST00000252506.6|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma 	ENST00000375769.1|GADD45G|ENSG00000130222.6|growth arrest and DNA-damage-inducible, gamma
hg19_v2_chr19_+_59055814_59055840	0.00113866	CCACAGG	ENST00000594806.1|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000253024.5|TRIM28|ENSG00000130726.7|tripartite motif containing 28 	ENST00000341753.6|TRIM28|ENSG00000130726.7|tripartite motif containing 28
hg19_v2_chr13_-_72441315_72441454	0.00113573	CCACAGG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr1_-_26197744_26197744	0.00113098	CCACAGG	ENST00000374296.3|PAQR7|ENSG00000182749.5|progestin and adipoQ receptor family member VII
hg19_v2_chr20_+_62526467_62526540	0.00111895	CCACAGG	ENST00000369911.2|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5 	ENST00000360864.4|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5
hg19_v2_chr16_+_28303804_28303864	0.00111202	CCACAGG	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr19_-_11591848_11591865	0.00110426	CCACAGG	ENST00000359227.3|ELAVL3|ENSG00000196361.5|ELAV like neuron-specific RNA binding protein 3
hg19_v2_chr5_+_138629417_138629467	0.00110262	CCACAGG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr10_-_27529716_27529756	0.00109908	CCACAGG	ENST00000375897.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5 	ENST00000396271.3|ACBD5|ENSG00000107897.14|acyl-CoA binding domain containing 5
hg19_v2_chr3_+_14860469_14860469	0.00108846	CCACAGG	ENST00000285046.5|FGD5|ENSG00000154783.6|FYVE, RhoGEF and PH domain containing 5
hg19_v2_chr10_-_23003460_23003562	0.00107506	CCACAGG	ENST00000376573.4|PIP4K2A|ENSG00000150867.9|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg19_v2_chr6_+_117586713_117586737	0.00105772	CCACAGG	ENST00000352536.3|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila) 	ENST00000326274.5|VGLL2|ENSG00000170162.9|vestigial like 2 (Drosophila)
hg19_v2_chr20_-_4982132_4982164	0.00105597	CCACAGG	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr17_-_40897043_40897087	0.00104506	CCACAGG	ENST00000428826.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592492.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000585893.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000593214.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000590078.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586382.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000415827.2|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000592743.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000586089.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila) 	ENST00000435174.1|EZH1|ENSG00000108799.8|enhancer of zeste homolog 1 (Drosophila)
hg19_v2_chr1_+_40505891_40505995	0.00103829	CCACAGG	ENST00000372797.3|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000372802.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast) 	ENST00000449311.1|CAP1|ENSG00000131236.12|CAP, adenylate cyclase-associated protein 1 (yeast)
hg19_v2_chr5_+_32788945_32788945	0.00103186	CCACAGG	ENST00000326958.1|AC026703.1|ENSG00000181495.1|AC026703.1
hg19_v2_chr7_+_116312411_116312502	0.00102229	CCACAGG	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr3_+_49591881_49591940	0.000999536	CCACAGG	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr9_+_82186872_82186898	0.000946223	CCACAGG	ENST00000376544.3|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) 	ENST00000376520.4|TLE4|ENSG00000106829.14|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
hg19_v2_chrX_+_106765680_106765680	0.000913166	CCACAGG	ENST00000276185.4|FRMPD3|ENSG00000147234.6|FERM and PDZ domain containing 3
hg19_v2_chr1_+_201252580_201252640	0.000900424	CCACAGG	ENST00000367324.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 	ENST00000263946.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg19_v2_chr11_+_63580855_63580889	0.00089684	CCACAGG	ENST00000294244.4|C11orf84|ENSG00000168005.4|chromosome 11 open reading frame 84
hg19_v2_chr2_+_33359687_33359724	0.000867682	CCACAGG	ENST00000402934.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000404525.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1 	ENST00000407925.1|LTBP1|ENSG00000049323.11|latent transforming growth factor beta binding protein 1
hg19_v2_chr1_-_154943212_154943230	0.000855322	CCACAGG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr11_+_35684288_35684353	0.000848305	CCACAGG	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr1_+_160051319_160051366	0.000843769	CCACAGG	ENST00000368088.3|KCNJ9|ENSG00000162728.4|potassium inwardly-rectifying channel, subfamily J, member 9
hg19_v2_chr6_-_116601044_116601106	0.000831873	CCACAGG	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr18_+_19749386_19749404	0.00082463	CCACAGG	ENST00000269216.3|GATA6|ENSG00000141448.4|GATA binding protein 6
hg19_v2_chr3_-_48632593_48632770	0.000820442	CCACAGG	ENST00000454817.1|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1 	ENST00000328333.8|COL7A1|ENSG00000114270.11|collagen, type VII, alpha 1
hg19_v2_chr12_-_57472522_57472556	0.000801862	CCACAGG	ENST00000379391.3|TMEM194A|ENSG00000166881.5|transmembrane protein 194A 	ENST00000300128.4|TMEM194A|ENSG00000166881.5|transmembrane protein 194A
hg19_v2_chr22_+_21271714_21271770	0.000791004	CCACAGG	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr17_-_3571934_3571976	0.000775031	CCACAGG	ENST00000225525.3|TAX1BP3|ENSG00000213977.3|Tax1 (human T-cell leukemia virus type I) binding protein 3
hg19_v2_chr1_+_165796753_165796776	0.000768111	CCACAGG	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr17_-_58469474_58469511	0.000765574	CCACAGG	ENST00000300896.4|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr5_+_140044261_140044464	0.000756152	CCACAGG	ENST00000358337.5|WDR55|ENSG00000120314.14|WD repeat domain 55
hg19_v2_chr6_+_36164487_36164559	0.000709244	CCACAGG	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr8_-_67579418_67579498	0.000681765	CCACAGG	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr1_+_43855560_43855640	0.000655624	CCACAGG	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr22_-_42017021_42017100	0.00065255	CCACAGG	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr1_-_16678914_16678989	0.000640301	CCACAGG	ENST00000375592.3|FBXO42|ENSG00000037637.6|F-box protein 42
hg19_v2_chr10_-_126849068_126849138	0.000626319	CCACAGG	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr17_-_3794021_3794042	0.000613867	CCACAGG	ENST00000381769.2|CAMKK1|ENSG00000004660.10|calcium/calmodulin-dependent protein kinase kinase 1, alpha
hg19_v2_chr1_+_181452678_181452716	0.000600115	CCACAGG	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr17_-_38020392_38020477	0.000585595	CCACAGG	ENST00000346872.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000439167.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377945.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000394189.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377944.3|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377958.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000535189.1|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos) 	ENST00000377952.2|IKZF3|ENSG00000161405.12|IKAROS family zinc finger 3 (Aiolos)
hg19_v2_chr14_-_68283291_68283323	0.000571798	CCACAGG	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr17_+_67410832_67410871	0.000554277	CCACAGG	ENST00000590474.1|MAP2K6|ENSG00000108984.9|mitogen-activated protein kinase kinase 6
hg19_v2_chr1_+_155290677_155290753	0.000515762	CCACAGG	ENST00000368354.3|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1 	ENST00000368352.5|RUSC1|ENSG00000160753.11|RUN and SH3 domain containing 1
hg19_v2_chr22_+_39853258_39853349	0.000513895	CCACAGG	ENST00000341184.6|MGAT3|ENSG00000128268.11|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr14_+_57046500_57046529	0.000502682	CCACAGG	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr11_+_65122216_65122238	0.000482839	CCACAGG	ENST00000309880.5|TIGD3|ENSG00000173825.6|tigger transposable element derived 3
hg19_v2_chr10_+_126630692_126630692	0.000473242	CCACAGG	ENST00000359653.4|ZRANB1|ENSG00000019995.6|zinc finger, RAN-binding domain containing 1
hg19_v2_chrX_-_153237258_153237295	0.00043958	CCACAGG	ENST00000310441.7|HCFC1|ENSG00000172534.9|host cell factor C1 (VP16-accessory protein)
hg19_v2_chr15_+_44719394_44719579	0.000417473	CCACAGG	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chr14_-_77787198_77787244	0.000407326	CCACAGG	ENST00000261534.4|POMT2|ENSG00000009830.7|protein-O-mannosyltransferase 2
hg19_v2_chr2_-_43453734_43453751	0.000387207	CCACAGG	ENST00000282388.3|ZFP36L2|ENSG00000152518.5|ZFP36 ring finger protein-like 2
hg19_v2_chr5_+_154092396_154092462	0.000354357	CCACAGG	ENST00000336314.4|LARP1|ENSG00000155506.12|La ribonucleoprotein domain family, member 1
hg19_v2_chr5_+_74632993_74633028	0.00034017	CCACAGG	ENST00000287936.4|HMGCR|ENSG00000113161.11|3-hydroxy-3-methylglutaryl-CoA reductase
hg19_v2_chr19_+_17420340_17420383	0.000326633	CCACAGG	ENST00000359866.4|DDA1|ENSG00000130311.6|DET1 and DDB1 associated 1
hg19_v2_chr19_-_49140692_49140709	0.000319794	CCACAGG	ENST00000222122.5|DBP|ENSG00000105516.6|D site of albumin promoter (albumin D-box) binding protein
hg19_v2_chr19_+_34745442_34745502	0.000305652	CCACAGG	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr7_-_27224795_27224840	0.000294113	CCACAGG	ENST00000006015.3|HOXA11|ENSG00000005073.5|homeobox A11
hg19_v2_chr5_-_180242534_180242567	0.000245957	CCACAGG	ENST00000333055.3|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 	ENST00000513431.1|MGAT1|ENSG00000131446.11|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr16_+_24741013_24741058	0.00021304	CCACAGG	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr18_+_18943554_18943587	0.000185701	CCACAGG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr14_+_65171099_65171210	0.000164434	CCACAGG	ENST00000247226.7|PLEKHG3|ENSG00000126822.11|pleckstrin homology domain containing, family G (with RhoGef domain) member 3
hg19_v2_chr7_-_132261253_132261323	0.000151399	CCACAGG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr4_+_26862400_26862416	7.18287e-05	CCACAGG	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr12_-_82153087_82153138	3.65136e-05	CCACAGG	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr10_-_75571341_75571364	5.03205e-06	CCACAGG	ENST00000309979.6|NDST2|ENSG00000166507.12|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
