hg19_v2_chr20_+_44637526_44637554	0.385131	AIRE	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chr13_-_30160925_30160931	0.225723	AIRE	ENST00000450494.1|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr15_+_45938079_45938105	0.174569	AIRE	ENST00000561493.1|SQRDL|ENSG00000137767.9|sulfide quinone reductase-like (yeast)
hg19_v2_chr19_+_16607122_16607274	0.168679	AIRE	ENST00000221671.3|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594035.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000599550.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594813.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44
hg19_v2_chr16_+_56672571_56672587	0.16601	AIRE	ENST00000290705.8|MT1A|ENSG00000205362.6|metallothionein 1A
hg19_v2_chr12_-_59175485_59175529	0.158899	AIRE	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr19_-_36643329_36643407	0.149449	AIRE	ENST00000589154.1|COX7A1|ENSG00000161281.6|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)
hg19_v2_chr11_-_327537_327537	0.143496	AIRE	ENST00000602735.1|IFITM3|ENSG00000142089.11|interferon induced transmembrane protein 3
hg19_v2_chr7_+_76101379_76101379	0.141847	AIRE	ENST00000429179.1|DTX2|ENSG00000091073.15|deltex homolog 2 (Drosophila)
hg19_v2_chr18_+_39739223_39739247	0.137775	AIRE	ENST00000601948.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907
hg19_v2_chr11_+_107650219_107650219	0.137656	AIRE	ENST00000398067.1|AP001024.1|ENSG00000214305.3|Uncharacterized protein
hg19_v2_chr1_+_96208646_96208657	0.130736	AIRE	ENST00000603401.1|RP11-286B14.2|ENSG00000271252.1|RP11-286B14.2
hg19_v2_chr12_+_75874580_75874661	0.116792	AIRE	ENST00000456650.3|GLIPR1|ENSG00000139278.5|GLI pathogenesis-related 1
hg19_v2_chr1_+_165864821_165864850	0.114522	AIRE	ENST00000470820.1|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr12_+_55248289_55248321	0.111982	AIRE	ENST00000308796.6|MUCL1|ENSG00000172551.6|mucin-like 1
hg19_v2_chr19_-_48753028_48753043	0.108111	AIRE	ENST00000522431.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr6_+_26104104_26104169	0.105602	AIRE	ENST00000377803.2|HIST1H4C|ENSG00000197061.3|histone cluster 1, H4c
hg19_v2_chr10_-_75682535_75682535	0.099041	AIRE	ENST00000409178.1|C10orf55|ENSG00000222047.4|chromosome 10 open reading frame 55
hg19_v2_chr5_-_38845812_38845931	0.0941782	AIRE	ENST00000513480.1|CTD-2127H9.1|ENSG00000249740.1|CTD-2127H9.1	ENST00000512519.1|CTD-2127H9.1|ENSG00000249740.1|CTD-2127H9.1
hg19_v2_chrM_+_8366_8398	0.094091	AIRE	ENST00000361851.1|MT-ATP8|ENSG00000228253.1|mitochondrially encoded ATP synthase 8
hg19_v2_chr11_+_64794875_64794983	0.0940401	AIRE	ENST00000377244.3|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000534637.1|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000524831.1|SNX15|ENSG00000110025.8|sorting nexin 15
hg19_v2_chr11_-_85376121_85376181	0.0866563	AIRE	ENST00000527447.1|CREBZF|ENSG00000137504.9|CREB/ATF bZIP transcription factor
hg19_v2_chr6_+_116937636_116937787	0.0847334	AIRE	ENST00000368581.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000229554.5|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000368580.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas)
hg19_v2_chr11_+_64794991_64795020	0.0829683	AIRE	ENST00000352068.5|SNX15|ENSG00000110025.8|sorting nexin 15 	ENST00000525648.1|SNX15|ENSG00000110025.8|sorting nexin 15
hg19_v2_chr8_-_145652336_145652378	0.0828258	AIRE	ENST00000529182.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae) 	ENST00000526054.1|VPS28|ENSG00000160948.9|vacuolar protein sorting 28 homolog (S. cerevisiae)
hg19_v2_chr1_+_79115503_79115530	0.0804015	AIRE	ENST00000370747.4|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000438486.1|IFI44|ENSG00000137965.6|interferon-induced protein 44 	ENST00000545124.1|IFI44|ENSG00000137965.6|interferon-induced protein 44
hg19_v2_chr19_-_10491234_10491352	0.0792214	AIRE	ENST00000524462.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000531836.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000525621.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr19_-_10491130_10491220	0.0779858	AIRE	ENST00000530829.1|TYK2|ENSG00000105397.9|tyrosine kinase 2 	ENST00000529370.1|TYK2|ENSG00000105397.9|tyrosine kinase 2
hg19_v2_chr19_-_4902877_4902887	0.0778694	AIRE	ENST00000381781.2|ARRDC5|ENSG00000205784.2|arrestin domain containing 5
hg19_v2_chrM_+_14741_14767	0.074595	AIRE	ENST00000361789.2|MT-CYB|ENSG00000198727.2|mitochondrially encoded cytochrome b
hg19_v2_chr6_+_22221010_22221034	0.0716954	AIRE	ENST00000567753.1|RP11-524C21.2|ENSG00000261568.1|RP11-524C21.2
hg19_v2_chrM_+_7586_7655	0.0691046	AIRE	ENST00000361739.1|MT-CO2|ENSG00000198712.1|mitochondrially encoded cytochrome c oxidase II
hg19_v2_chr12_+_12202785_12202802	0.0684414	AIRE	ENST00000586576.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000464885.2|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr10_-_106240032_106240047	0.0671677	AIRE	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr11_-_26744908_26744936	0.0606468	AIRE	ENST00000533617.1|SLC5A12|ENSG00000148942.10|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 12
hg19_v2_chr4_+_69917078_69917101	0.0605956	AIRE	ENST00000502942.1|UGT2B7|ENSG00000171234.9|UDP glucuronosyltransferase 2 family, polypeptide B7
hg19_v2_chr17_+_77030267_77030391	0.0604042	AIRE	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr16_+_75182376_75182480	0.0599074	AIRE	ENST00000570010.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000568079.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000464850.1|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000332307.4|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein 	ENST00000393430.2|ZFP1|ENSG00000184517.7|ZFP1 zinc finger protein
hg19_v2_chr4_-_57524061_57524074	0.0594246	AIRE	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr8_+_128748308_128748330	0.0583779	AIRE	ENST00000377970.2|MYC|ENSG00000136997.10|v-myc avian myelocytomatosis viral oncogene homolog
hg19_v2_chr8_+_104384616_104384661	0.0583606	AIRE	ENST00000520337.1|CTHRC1|ENSG00000164932.8|collagen triple helix repeat containing 1
hg19_v2_chr1_-_243326612_243326642	0.0559254	AIRE	ENST00000492145.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000490813.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000464936.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr14_-_24912047_24912064	0.0554359	AIRE	ENST00000553930.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr2_+_38177575_38177612	0.0544792	AIRE	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr7_+_20686946_20686966	0.0543001	AIRE	ENST00000443026.2|ABCB5|ENSG00000004846.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5 	ENST00000406935.1|ABCB5|ENSG00000004846.12|ATP-binding cassette, sub-family B (MDR/TAP), member 5
hg19_v2_chr16_+_446713_446769	0.053737	AIRE	ENST00000397722.1|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4 	ENST00000454619.1|NME4|ENSG00000103202.8|NME/NM23 nucleoside diphosphate kinase 4
hg19_v2_chr19_-_2085323_2085391	0.0521614	AIRE	ENST00000591638.1|MOB3A|ENSG00000172081.9|MOB kinase activator 3A
hg19_v2_chr16_-_28503327_28503356	0.0514816	AIRE	ENST00000535392.1|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3 	ENST00000395653.4|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3
hg19_v2_chr13_+_111893533_111893591	0.0512965	AIRE	ENST00000478679.1|ARHGEF7|ENSG00000102606.13|Rho guanine nucleotide exchange factor (GEF) 7
hg19_v2_chr17_-_295730_295730	0.0512255	AIRE	ENST00000329099.4|FAM101B|ENSG00000183688.4|family with sequence similarity 101, member B
hg19_v2_chr16_+_57126428_57126450	0.0508096	AIRE	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr3_-_49466686_49466764	0.0488456	AIRE	ENST00000273598.3|NICN1|ENSG00000145029.7|nicolin 1 	ENST00000436744.2|NICN1|ENSG00000145029.7|nicolin 1
hg19_v2_chr12_+_12224331_12224402	0.0477853	AIRE	ENST00000396367.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000266434.4|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator) 	ENST00000396369.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr16_-_71518504_71518542	0.0477485	AIRE	ENST00000565100.2|ZNF19|ENSG00000157429.11|zinc finger protein 19
hg19_v2_chr19_-_23869970_23869991	0.0475209	AIRE	ENST00000601010.1|ZNF675|ENSG00000197372.5|zinc finger protein 675
hg19_v2_chr9_-_104198042_104198105	0.0472615	AIRE	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr21_+_39644214_39644219	0.0470705	AIRE	ENST00000438657.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr2_-_225811747_225811796	0.0469762	AIRE	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr21_+_39644305_39644351	0.0454803	AIRE	ENST00000398930.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr16_-_31147020_31147083	0.0448781	AIRE	ENST00000568261.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000567797.1|PRSS8|ENSG00000052344.11|protease, serine, 8 	ENST00000317508.6|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr19_-_48753064_48753095	0.0444384	AIRE	ENST00000520153.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000357778.5|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8 	ENST00000520015.1|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr12_-_113772835_113772954	0.0442802	AIRE	ENST00000552014.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000548186.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000202831.3|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1 	ENST00000549181.1|SLC8B1|ENSG00000089060.7|solute carrier family 8 (sodium/lithium/calcium exchanger), member B1
hg19_v2_chr7_-_36764004_36764059	0.0440518	AIRE	ENST00000431169.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr18_-_56985776_56985815	0.0431765	AIRE	ENST00000587244.1|CPLX4|ENSG00000166569.4|complexin 4
hg19_v2_chr6_+_155443048_155443094	0.0427128	AIRE	ENST00000535583.1|TIAM2|ENSG00000146426.13|T-cell lymphoma invasion and metastasis 2
hg19_v2_chr5_+_122181279_122181321	0.0426284	AIRE	ENST00000395451.4|SNX24|ENSG00000064652.6|sorting nexin 24 	ENST00000506996.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr7_+_80255472_80255507	0.0420717	AIRE	ENST00000428497.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr5_+_140625147_140625147	0.0414012	AIRE	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr1_+_40840320_40840413	0.0411447	AIRE	ENST00000372708.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr21_+_39644172_39644185	0.0409935	AIRE	ENST00000398932.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr11_+_94038759_94038822	0.0401003	AIRE	ENST00000440961.2|FOLR4|ENSG00000183560.4|folate receptor 4, delta (putative) 	ENST00000328458.4|FOLR4|ENSG00000183560.4|folate receptor 4, delta (putative)
hg19_v2_chr4_-_120243545_120243562	0.0389539	AIRE	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr16_+_57126482_57126552	0.0385915	AIRE	ENST00000537605.1|CPNE2|ENSG00000140848.12|copine II 	ENST00000535318.2|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr1_+_36038971_36038971	0.0382042	AIRE	ENST00000373235.3|TFAP2E|ENSG00000116819.6|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)
hg19_v2_chr3_-_19975665_19975719	0.0380384	AIRE	ENST00000295824.9|EFHB|ENSG00000163576.13|EF-hand domain family, member B 	ENST00000389256.4|EFHB|ENSG00000163576.13|EF-hand domain family, member B
hg19_v2_chr12_-_11139511_11139511	0.0378798	AIRE	ENST00000506868.1|TAS2R50|ENSG00000212126.3|taste receptor, type 2, member 50
hg19_v2_chr8_-_16043780_16043783	0.0375073	AIRE	ENST00000445506.2|MSR1|ENSG00000038945.10|macrophage scavenger receptor 1
hg19_v2_chr21_+_30502806_30502989	0.0368974	AIRE	ENST00000399928.1|MAP3K7CL|ENSG00000156265.11|MAP3K7 C-terminal like 	ENST00000399926.1|MAP3K7CL|ENSG00000156265.11|MAP3K7 C-terminal like
hg19_v2_chr9_-_70178815_70178815	0.0368048	AIRE	ENST00000377420.1|FOXD4L5|ENSG00000204779.2|forkhead box D4-like 5
hg19_v2_chr21_+_39644395_39644454	0.0360988	AIRE	ENST00000398934.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chrM_+_12331_12348	0.0358515	AIRE	ENST00000361567.2|MT-ND5|ENSG00000198786.2|mitochondrially encoded NADH dehydrogenase 5
hg19_v2_chr4_+_1385340_1385340	0.0354424	AIRE	ENST00000324803.4|CRIPAK|ENSG00000179979.7|cysteine-rich PAK1 inhibitor
hg19_v2_chr10_-_101841588_101841634	0.0345669	AIRE	ENST00000370418.3|CPN1|ENSG00000120054.7|carboxypeptidase N, polypeptide 1
hg19_v2_chrX_+_70503433_70503517	0.0337468	AIRE	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr10_+_115511213_115511272	0.0336756	AIRE	ENST00000361048.1|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr16_-_56223480_56223503	0.0335724	AIRE	ENST00000565155.1|RP11-461O7.1|ENSG00000246379.2|RP11-461O7.1
hg19_v2_chr19_-_47249679_47249737	0.0334265	AIRE	ENST00000263280.6|STRN4|ENSG00000090372.10|striatin, calmodulin binding protein 4
hg19_v2_chr13_+_50570019_50570028	0.0332318	AIRE	ENST00000442421.1|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr1_-_152297679_152297722	0.0311684	AIRE	ENST00000368799.1|FLG|ENSG00000143631.10|filaggrin
hg19_v2_chr11_-_8954491_8954536	0.0308123	AIRE	ENST00000526227.1|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16 	ENST00000525780.1|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16 	ENST00000326053.5|C11orf16|ENSG00000176029.9|chromosome 11 open reading frame 16
hg19_v2_chr3_+_140981456_140981508	0.0301082	AIRE	ENST00000504264.1|ACPL2|ENSG00000155893.7|acid phosphatase-like 2
hg19_v2_chrM_+_4431_4475	0.0300917	AIRE	ENST00000361453.3|MT-ND2|ENSG00000198763.3|mitochondrially encoded NADH dehydrogenase 2
hg19_v2_chrM_-_14670_14676	0.0299403	AIRE	ENST00000361681.2|MT-ND6|ENSG00000198695.2|mitochondrially encoded NADH dehydrogenase 6
hg19_v2_chr9_+_42717234_42717234	0.0297064	AIRE	ENST00000377590.1|FOXD4L2|ENSG00000204828.2|forkhead box D4-like 2
hg19_v2_chr13_-_46756351_46756459	0.0296359	AIRE	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr19_+_45418067_45418126	0.0295719	AIRE	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr7_-_36764142_36764157	0.0282715	AIRE	ENST00000258749.5|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil) 	ENST00000535891.1|AOAH|ENSG00000136250.7|acyloxyacyl hydrolase (neutrophil)
hg19_v2_chr9_+_117904097_117904097	0.0269084	AIRE	ENST00000374016.1|DEC1|ENSG00000173077.10|deleted in esophageal cancer 1
hg19_v2_chr10_-_46030841_46030846	0.0267885	AIRE	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr1_-_154600421_154600480	0.0264454	AIRE	ENST00000368471.3|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific 	ENST00000292205.5|ADAR|ENSG00000160710.11|adenosine deaminase, RNA-specific
hg19_v2_chr18_+_39766626_39766668	0.0263883	AIRE	ENST00000593234.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585627.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591199.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000586990.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593051.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000593316.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000591381.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000585639.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907 	ENST00000589068.1|LINC00907|ENSG00000267586.2|long intergenic non-protein coding RNA 907
hg19_v2_chr19_-_48752812_48752925	0.0263374	AIRE	ENST00000359009.4|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr9_-_70429731_70429731	0.0260348	AIRE	ENST00000377413.1|FOXD4L4|ENSG00000184659.4|forkhead box D4-like 4
hg19_v2_chr15_-_99789736_99789820	0.0256952	AIRE	ENST00000560235.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394132.2|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560860.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558078.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394136.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000262074.4|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000558613.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000394130.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23 	ENST00000560772.1|TTC23|ENSG00000103852.8|tetratricopeptide repeat domain 23
hg19_v2_chr2_+_1417228_1417252	0.0256782	AIRE	ENST00000382269.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000337415.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000345913.4|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000346956.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000349624.3|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000539820.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000329066.4|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000382201.3|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr19_-_48753104_48753123	0.0255664	AIRE	ENST00000447740.2|CARD8|ENSG00000105483.12|caspase recruitment domain family, member 8
hg19_v2_chr14_-_24911971_24912015	0.0248512	AIRE	ENST00000555365.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000399395.3|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr12_+_4758264_4758314	0.0244833	AIRE	ENST00000266544.5|NDUFA9|ENSG00000139180.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa
hg19_v2_chr9_-_79267432_79267465	0.0240909	AIRE	ENST00000424866.1|PRUNE2|ENSG00000106772.13|prune homolog 2 (Drosophila)
hg19_v2_chr11_+_6947647_6947698	0.0237407	AIRE	ENST00000278319.5|ZNF215|ENSG00000149054.10|zinc finger protein 215
hg19_v2_chr3_+_189507460_189507471	0.0237248	AIRE	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr10_-_69597810_69597827	0.0236771	AIRE	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr22_+_36649170_36649207	0.0233388	AIRE	ENST00000438034.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000427990.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000347595.7|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000397279.4|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000433768.1|APOL1|ENSG00000100342.16|apolipoprotein L, 1 	ENST00000440669.2|APOL1|ENSG00000100342.16|apolipoprotein L, 1
hg19_v2_chr19_-_59084922_59084947	0.0233074	AIRE	ENST00000215057.2|MZF1|ENSG00000099326.4|myeloid zinc finger 1 	ENST00000599369.1|MZF1|ENSG00000099326.4|myeloid zinc finger 1
hg19_v2_chr19_-_16606988_16607003	0.0231675	AIRE	ENST00000269881.3|CALR3|ENSG00000269058.1|calreticulin 3
hg19_v2_chr6_-_127663543_127663559	0.022829	AIRE	ENST00000531582.1|ECHDC1|ENSG00000093144.14|enoyl CoA hydratase domain containing 1
hg19_v2_chr16_-_31146961_31147017	0.0227125	AIRE	ENST00000567531.1|PRSS8|ENSG00000052344.11|protease, serine, 8
hg19_v2_chr5_+_667759_667759	0.0224863	AIRE	ENST00000594226.1|AC026740.1|ENSG00000268885.1|Uncharacterized protein
hg19_v2_chr9_-_4666421_4666492	0.0223901	AIRE	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr17_+_7210294_7210330	0.0223481	AIRE	ENST00000336452.7|EIF5A|ENSG00000132507.13|eukaryotic translation initiation factor 5A
hg19_v2_chr17_+_41857793_41857814	0.0220672	AIRE	ENST00000449302.3|C17orf105|ENSG00000231256.3|chromosome 17 open reading frame 105
hg19_v2_chr8_+_24241789_24241802	0.0218941	AIRE	ENST00000256412.4|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1 	ENST00000538205.1|ADAMDEC1|ENSG00000134028.10|ADAM-like, decysin 1
hg19_v2_chr2_-_166060571_166060582	0.0214225	AIRE	ENST00000360093.3|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr10_+_82300575_82300575	0.0205628	AIRE	ENST00000313455.4|SH2D4B|ENSG00000178217.9|SH2 domain containing 4B
hg19_v2_chr6_+_118869452_118869475	0.0202963	AIRE	ENST00000357525.5|PLN|ENSG00000198523.5|phospholamban
hg19_v2_chr2_+_179316163_179316163	0.0200443	AIRE	ENST00000409117.3|DFNB59|ENSG00000204311.7|deafness, autosomal recessive 59
hg19_v2_chr1_+_241815577_241815588	0.0194916	AIRE	ENST00000366552.2|WDR64|ENSG00000162843.13|WD repeat domain 64 	ENST00000437684.2|WDR64|ENSG00000162843.13|WD repeat domain 64
hg19_v2_chr16_-_29499154_29499154	0.018909	AIRE	ENST00000354563.5|RP11-231C14.4|ENSG00000169203.12|Uncharacterized protein
hg19_v2_chr9_+_100615536_100615558	0.0187326	AIRE	ENST00000375123.3|FOXE1|ENSG00000178919.7|forkhead box E1 (thyroid transcription factor 2)
hg19_v2_chr9_-_113761720_113761756	0.0185202	AIRE	ENST00000541779.1|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1 	ENST00000374430.2|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr2_+_207804278_207804301	0.0178999	AIRE	ENST00000272852.3|CPO|ENSG00000144410.4|carboxypeptidase O
hg19_v2_chrX_-_139866723_139866723	0.0175546	AIRE	ENST00000370532.2|CDR1|ENSG00000184258.5|cerebellar degeneration-related protein 1, 34kDa
hg19_v2_chrM_+_5824_5904	0.0174589	AIRE	ENST00000361624.2|MT-CO1|ENSG00000198804.2|mitochondrially encoded cytochrome c oxidase I
hg19_v2_chr12_-_6579833_6579850	0.0170141	AIRE	ENST00000396308.3|VAMP1|ENSG00000139190.12|vesicle-associated membrane protein 1 (synaptobrevin 1)
hg19_v2_chr4_-_88450612_88450656	0.0169423	AIRE	ENST00000418378.1|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin) 	ENST00000282470.6|SPARCL1|ENSG00000152583.8|SPARC-like 1 (hevin)
hg19_v2_chrX_-_153191674_153191701	0.0166939	AIRE	ENST00000350060.5|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4 	ENST00000370016.1|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4
hg19_v2_chr7_-_87936195_87936223	0.0154894	AIRE	ENST00000414498.1|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000301959.5|STEAP4|ENSG00000127954.8|STEAP family member 4 	ENST00000380079.4|STEAP4|ENSG00000127954.8|STEAP family member 4
hg19_v2_chr14_-_75330537_75330537	0.0148906	AIRE	ENST00000556084.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000556489.2|PROX2|ENSG00000119608.8|prospero homeobox 2 	ENST00000445876.1|PROX2|ENSG00000119608.8|prospero homeobox 2
hg19_v2_chr1_-_167883327_167883352	0.0146763	AIRE	ENST00000476818.2|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367851.4|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble) 	ENST00000367848.1|ADCY10|ENSG00000143199.13|adenylate cyclase 10 (soluble)
hg19_v2_chr4_-_66536057_66536071	0.014278	AIRE	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr6_-_33266687_33266728	0.0142323	AIRE	ENST00000444031.2|RGL2|ENSG00000237441.5|ral guanine nucleotide dissociation stimulator-like 2
hg19_v2_chr11_+_35211511_35211557	0.0138568	AIRE	ENST00000524922.1|CD44|ENSG00000026508.12|CD44 molecule (Indian blood group)
hg19_v2_chr7_-_149194843_149194922	0.0131899	AIRE	ENST00000458143.2|ZNF746|ENSG00000181220.11|zinc finger protein 746 	ENST00000340622.3|ZNF746|ENSG00000181220.11|zinc finger protein 746
hg19_v2_chr9_+_71357171_71357185	0.0127559	AIRE	ENST00000440050.1|PIP5K1B|ENSG00000107242.13|phosphatidylinositol-4-phosphate 5-kinase, type I, beta
hg19_v2_chr2_-_166060552_166060566	0.0124313	AIRE	ENST00000283254.7|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit 	ENST00000453007.1|SCN3A|ENSG00000153253.11|sodium channel, voltage-gated, type III, alpha subunit
hg19_v2_chr6_-_32806506_32806599	0.012342	AIRE	ENST00000374897.2|TAP2|ENSG00000204267.9|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) 	ENST00000452392.2|TAP2|ENSG00000250264.1|Uncharacterized protein
hg19_v2_chr22_-_32767017_32767063	0.0121672	AIRE	ENST00000400234.1|RFPL3S|ENSG00000205853.6|RFPL3 antisense
hg19_v2_chr6_-_149806105_149806197	0.012117	AIRE	ENST00000389942.5|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000416573.2|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000542614.1|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D 	ENST00000409806.3|ZC3H12D|ENSG00000178199.9|zinc finger CCCH-type containing 12D
hg19_v2_chr14_-_65409438_65409479	0.0119558	AIRE	ENST00000557049.1|GPX2|ENSG00000176153.10|glutathione peroxidase 2 (gastrointestinal)
hg19_v2_chr11_+_45376922_45377052	0.0115345	AIRE	ENST00000524410.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1	ENST00000524488.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1	ENST00000524565.1|RP11-430H10.1|ENSG00000254427.1|RP11-430H10.1
hg19_v2_chr10_+_127661942_127662084	0.0112922	AIRE	ENST00000417114.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000445510.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000368691.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1
hg19_v2_chr1_+_207669573_207669606	0.0110182	AIRE	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr7_-_15601595_15601657	0.0109962	AIRE	ENST00000342526.3|AGMO|ENSG00000187546.9|alkylglycerol monooxygenase
hg19_v2_chrX_-_153191708_153191767	0.0107872	AIRE	ENST00000393721.1|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4 	ENST00000370028.3|ARHGAP4|ENSG00000089820.11|Rho GTPase activating protein 4
hg19_v2_chr6_+_36839616_36839646	0.0105304	AIRE	ENST00000359359.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89 	ENST00000510325.2|C6orf89|ENSG00000198663.12|chromosome 6 open reading frame 89
hg19_v2_chr1_+_207669613_207669686	0.00998866	AIRE	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr12_+_7282795_7283047	0.00976145	AIRE	ENST00000266546.6|CLSTN3|ENSG00000139182.9|calsyntenin 3
hg19_v2_chr3_-_123710199_123710199	0.00975473	AIRE	ENST00000184183.4|ROPN1|ENSG00000065371.13|rhophilin associated tail protein 1
hg19_v2_chr17_+_34171081_34171145	0.00960046	AIRE	ENST00000585577.1|TAF15|ENSG00000172660.7|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
hg19_v2_chr4_-_16085657_16085668	0.00918873	AIRE	ENST00000543373.1|PROM1|ENSG00000007062.7|prominin 1
hg19_v2_chr15_+_59910132_59910144	0.00864224	AIRE	ENST00000559200.1|GCNT3|ENSG00000140297.8|glucosaminyl (N-acetyl) transferase 3, mucin type
hg19_v2_chr12_+_12223867_12223883	0.0079179	AIRE	ENST00000308721.5|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr2_-_127977654_127977654	0.00787753	AIRE	ENST00000409327.1|CYP27C1|ENSG00000186684.8|cytochrome P450, family 27, subfamily C, polypeptide 1
hg19_v2_chr7_-_137028534_137028611	0.0076883	AIRE	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr7_+_142374104_142374104	0.00762813	AIRE	ENST00000604952.1|MTRNR2L6|ENSG00000270672.1|MT-RNR2-like 6
hg19_v2_chr8_-_7220490_7220490	0.00699108	AIRE	ENST00000400078.2|ZNF705G|ENSG00000215372.5|zinc finger protein 705G
hg19_v2_chr20_-_33735070_33735175	0.00678582	AIRE	ENST00000374491.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000542871.1|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2 	ENST00000374492.3|EDEM2|ENSG00000088298.8|ER degradation enhancer, mannosidase alpha-like 2
hg19_v2_chr21_-_44495919_44495953	0.0065637	AIRE	ENST00000398158.1|CBS|ENSG00000160200.13|cystathionine-beta-synthase
hg19_v2_chr2_+_234686976_234686976	0.00602394	AIRE	ENST00000389758.3|MROH2A|ENSG00000185038.10|maestro heat-like repeat family member 2A
hg19_v2_chr12_-_64784471_64784503	0.00563158	AIRE	ENST00000333722.5|C12orf56|ENSG00000185306.8|chromosome 12 open reading frame 56
hg19_v2_chr10_-_81270678_81270678	0.00545608	AIRE	ENST00000538322.1|AL133481.1|ENSG00000235705.4|Uncharacterized protein
hg19_v2_chr6_-_33864684_33864698	0.00489407	AIRE	ENST00000506222.2|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016 	ENST00000533304.1|LINC01016|ENSG00000249346.2|long intergenic non-protein coding RNA 1016
hg19_v2_chr2_-_198540719_198540748	0.00466884	AIRE	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr12_+_20963647_20963666	0.00411921	AIRE	ENST00000381545.3|SLCO1B3|ENSG00000111700.8|solute carrier organic anion transporter family, member 1B3
hg19_v2_chr4_-_186696425_186696452	0.00395087	AIRE	ENST00000430503.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000319454.6|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000450341.1|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr2_+_166150541_166150594	0.00384358	AIRE	ENST00000283256.6|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr12_+_12202774_12202780	0.0028658	AIRE	ENST00000589718.1|BCL2L14|ENSG00000121380.8|BCL2-like 14 (apoptosis facilitator)
hg19_v2_chr21_-_44495964_44496055	0.00271781	AIRE	ENST00000398168.1|CBS|ENSG00000160200.13|cystathionine-beta-synthase 	ENST00000398165.3|CBS|ENSG00000160200.13|cystathionine-beta-synthase
hg19_v2_chr15_-_81202118_81202118	0.00216411	AIRE	ENST00000560560.1|RP11-351M8.1|ENSG00000259649.1|Uncharacterized protein
hg19_v2_chr4_-_120222076_120222076	0.00163435	AIRE	ENST00000504110.1|C4orf3|ENSG00000164096.10|chromosome 4 open reading frame 3
hg19_v2_chr8_-_141774467_141774622	0.00163254	AIRE	ENST00000520151.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519024.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2 	ENST00000519465.1|PTK2|ENSG00000169398.15|protein tyrosine kinase 2
hg19_v2_chr10_-_46030787_46030824	0.00142808	AIRE	ENST00000395769.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr12_-_75603482_75603534	0.00105815	AIRE	ENST00000341669.3|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000298972.1|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2 	ENST00000350228.2|KCNC2|ENSG00000166006.8|potassium voltage-gated channel, Shaw-related subfamily, member 2
hg19_v2_chr5_-_77844974_77844994	0.0010377	AIRE	ENST00000515007.2|LHFPL2|ENSG00000145685.9|lipoma HMGIC fusion partner-like 2
hg19_v2_chr11_+_327171_327415	5.31476e-06	AIRE	ENST00000534483.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12	ENST00000524824.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12	ENST00000531076.1|RP11-326C3.12|ENSG00000255328.1|RP11-326C3.12
