ISMARA results: UAAGACG

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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for UAAGACG

Z-value: 0.18

Motif logo

miRNA associated with seed UAAGACG

Name	miRBASE accession
hsa-miR-208a-3p miRBase	MIMAT0000241
hsa-miR-208b-3p miRBase	MIMAT0004960

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr2_-_68290106 Show fit	0.07	ENST00000407324.1 ENST00000355848.3 ENST00000409302.1 ENST00000410067.3	C1D Ensembl NCBI GeneCards UniProt NextProt Show fit	C1D nuclear receptor corepressor
chr1_-_108507631 Show fit	0.06	ENST00000527011.1 ENST00000370056.4	VAV3 Ensembl NCBI GeneCards UniProt NextProt Show fit	vav 3 guanine nucleotide exchange factor
chr8_+_48920960 Show fit	0.05	ENST00000523111.2 ENST00000523432.1 ENST00000521346.1 ENST00000517630.1	UBE2V2 Ensembl NCBI GeneCards UniProt NextProt Show fit	ubiquitin-conjugating enzyme E2 variant 2
chr4_+_103790120 Show fit	0.05	ENST00000273986.4	CISD2 Ensembl NCBI GeneCards UniProt NextProt Show fit	CDGSH iron sulfur domain 2
chr10_+_112631547 Show fit	0.04	ENST00000280154.7 ENST00000393104.2	PDCD4 Ensembl NCBI GeneCards UniProt NextProt Show fit	programmed cell death 4 (neoplastic transformation inhibitor)
chr9_-_140196703 Show fit	0.04	ENST00000356628.2	NRARP Ensembl NCBI GeneCards UniProt NextProt Show fit	NOTCH-regulated ankyrin repeat protein
chr10_+_98592009 Show fit	0.03	ENST00000540664.1 ENST00000371103.3	LCOR Ensembl NCBI GeneCards UniProt NextProt Show fit	ligand dependent nuclear receptor corepressor
chr10_-_89577910 Show fit	0.03	ENST00000308448.7 ENST00000541004.1	ATAD1 Ensembl NCBI GeneCards UniProt NextProt Show fit	ATPase family, AAA domain containing 1
chr1_+_145611010 Show fit	0.03	ENST00000369291.5	RNF115 Ensembl NCBI GeneCards UniProt NextProt Show fit	ring finger protein 115
chr2_+_228029281 Show fit	0.03	ENST00000396578.3	COL4A3 Ensembl NCBI GeneCards UniProt NextProt Show fit	collagen, type IV, alpha 3 (Goodpasture antigen)

Showing 1 to 10 of 90 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.0	GO:1904761	negative regulation of myofibroblast differentiation(GO:1904761)

Showing 1 to 1 of 1 entries

Gene overrepresentation in cellular_component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0031372	UBC13-MMS2 complex(GO:0031372)

Showing 1 to 1 of 1 entries

Results for UAAGACG

Z-value: 0.18

Motif logo

miRNA associated with seed UAAGACG

Activity profile of UAAGACG motif

Sorted Z-values of UAAGACG motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of UAAGACG

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category: