NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CHD1 | hg19_v2_chr5_-_98262240_98262240 | 0.60 | 2.1e-01 | Click! |
SIN3A | hg19_v2_chr15_-_75743991_75744011 | -0.53 | 2.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_-_32403370 Show fit | 1.96 |
ENST00000534796.1
|
protein tyrosine phosphatase type IVA, member 2 |
|
chr7_-_32931623 Show fit | 1.94 |
ENST00000452926.1
|
kelch repeat and BTB (POZ) domain containing 2 |
|
chr17_-_58469591 Show fit | 1.49 |
ENST00000589335.1
|
ubiquitin specific peptidase 32 |
|
chr3_+_178865887 Show fit | 1.48 |
ENST00000477735.1
|
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha |
|
chr2_-_174828892 Show fit | 1.47 |
ENST00000418194.2
|
Sp3 transcription factor |
|
chr11_+_48002279 Show fit | 1.32 |
ENST00000534219.1
ENST00000527952.1 |
protein tyrosine phosphatase, receptor type, J |
|
chr4_+_141677577 Show fit | 1.27 |
ENST00000609937.1
|
RP11-102N12.3 |
|
chr18_+_44497455 Show fit | 1.27 |
ENST00000592005.1
|
katanin p60 subunit A-like 2 |
|
chr6_-_153452356 Show fit | 1.25 |
ENST00000206262.1
|
regulator of G-protein signaling 17 |
|
chr3_-_176915036 Show fit | 1.24 |
ENST00000427349.1
ENST00000352800.5 |
transducin (beta)-like 1 X-linked receptor 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0060613 | fat pad development(GO:0060613) |
0.5 | 2.2 | GO:1905205 | positive regulation of cardiac muscle adaptation(GO:0010615) positive regulation of cardiac muscle hypertrophy in response to stress(GO:1903244) positive regulation of connective tissue replacement(GO:1905205) |
0.2 | 2.2 | GO:0002051 | osteoblast fate commitment(GO:0002051) |
0.2 | 2.2 | GO:2000601 | positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601) |
0.3 | 2.1 | GO:0006499 | N-terminal protein myristoylation(GO:0006499) |
0.0 | 2.1 | GO:1902850 | microtubule cytoskeleton organization involved in mitosis(GO:1902850) |
0.2 | 2.0 | GO:0043353 | enucleate erythrocyte differentiation(GO:0043353) |
0.2 | 2.0 | GO:0019695 | choline metabolic process(GO:0019695) |
0.2 | 2.0 | GO:0060083 | smooth muscle contraction involved in micturition(GO:0060083) |
0.0 | 2.0 | GO:0050690 | regulation of defense response to virus by virus(GO:0050690) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.7 | GO:0005876 | spindle microtubule(GO:0005876) |
0.3 | 3.2 | GO:0005955 | calcineurin complex(GO:0005955) |
0.0 | 3.2 | GO:0048770 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.2 | 2.5 | GO:0005943 | phosphatidylinositol 3-kinase complex, class IA(GO:0005943) |
0.1 | 2.4 | GO:0072357 | PTW/PP1 phosphatase complex(GO:0072357) |
0.1 | 2.4 | GO:0031209 | SCAR complex(GO:0031209) |
0.0 | 2.3 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.1 | 2.2 | GO:0071141 | SMAD protein complex(GO:0071141) |
0.0 | 2.2 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
0.0 | 2.2 | GO:0001772 | immunological synapse(GO:0001772) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.6 | GO:0019003 | GDP binding(GO:0019003) |
0.4 | 5.0 | GO:0033192 | calmodulin-dependent protein phosphatase activity(GO:0033192) |
0.0 | 4.1 | GO:0008565 | protein transporter activity(GO:0008565) |
0.0 | 3.6 | GO:0004843 | thiol-dependent ubiquitin-specific protease activity(GO:0004843) |
0.7 | 2.7 | GO:0004727 | prenylated protein tyrosine phosphatase activity(GO:0004727) |
0.1 | 2.7 | GO:0030618 | transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity(GO:0030618) |
0.1 | 2.3 | GO:0004535 | poly(A)-specific ribonuclease activity(GO:0004535) |
0.1 | 2.1 | GO:0042609 | CD4 receptor binding(GO:0042609) |
0.0 | 2.1 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.3 | 2.0 | GO:0071535 | RING-like zinc finger domain binding(GO:0071535) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.1 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 5.0 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.1 | 4.3 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
0.2 | 4.2 | PID ALK2 PATHWAY | ALK2 signaling events |
0.1 | 4.2 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.1 | 3.0 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.1 | 3.0 | PID INSULIN GLUCOSE PATHWAY | Insulin-mediated glucose transport |
0.0 | 2.6 | PID TELOMERASE PATHWAY | Regulation of Telomerase |
0.1 | 2.5 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
0.1 | 2.5 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.6 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 4.2 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.1 | 3.3 | REACTOME DARPP 32 EVENTS | Genes involved in DARPP-32 events |
0.0 | 3.2 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 3.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 3.0 | REACTOME REGULATION OF AMPK ACTIVITY VIA LKB1 | Genes involved in Regulation of AMPK activity via LKB1 |
0.1 | 2.7 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.1 | 2.6 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 2.4 | REACTOME SIGNALING BY BMP | Genes involved in Signaling by BMP |
0.0 | 2.4 | REACTOME APOPTOTIC CLEAVAGE OF CELLULAR PROTEINS | Genes involved in Apoptotic cleavage of cellular proteins |