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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for SHOX

Z-value: 0.66

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Transcription factors associated with SHOX

Gene Symbol Gene ID Gene Info
SHOX
ENSG00000185960.8 short stature homeobox
SHOX
ENSGR0000185960.8 short stature homeobox

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SHOXhg19_v2_chrX_+_591524_5915420.147.9e-01Click!

Activity profile of SHOX motif

Sorted Z-values of SHOX motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr14_-_57197224 0.49 ENST00000554597.1
ENST00000556696.1
RP11-1085N6.3
Uncharacterized protein
chr7_-_92777606 0.36 ENST00000437805.1
ENST00000446959.1
ENST00000439952.1
ENST00000414791.1
ENST00000446033.1
ENST00000411955.1
ENST00000318238.4
SAMD9L
sterile alpha motif domain containing 9-like
chr14_+_38065052 0.36 ENST00000556845.1
TTC6
tetratricopeptide repeat domain 6
chr6_-_31107127 0.36 ENST00000259845.4
PSORS1C2
psoriasis susceptibility 1 candidate 2
chr15_+_86087267 0.28 ENST00000558166.1
AKAP13
A kinase (PRKA) anchor protein 13
chr4_+_146402346 0.27 ENST00000514778.1
ENST00000507594.1
SMAD1
SMAD family member 1
chr14_+_65016620 0.26 ENST00000298705.1
PPP1R36
protein phosphatase 1, regulatory subunit 36
chr9_-_5304432 0.25 ENST00000416837.1
ENST00000308420.3
RLN2
relaxin 2
chr7_-_77427676 0.24 ENST00000257663.3
TMEM60
transmembrane protein 60
chr12_+_7014126 0.24 ENST00000415834.1
ENST00000436789.1
LRRC23
leucine rich repeat containing 23
chr5_-_126409159 0.24 ENST00000607731.1
ENST00000535381.1
ENST00000296662.5
ENST00000509733.3
C5orf63
chromosome 5 open reading frame 63
chr4_+_183065793 0.23 ENST00000512480.1
TENM3
teneurin transmembrane protein 3
chr2_+_216946589 0.22 ENST00000433112.1
ENST00000454545.1
ENST00000437356.2
ENST00000295658.4
ENST00000455479.1
ENST00000406027.2
TMEM169
transmembrane protein 169
chr11_-_118023594 0.21 ENST00000529878.1
SCN4B
sodium channel, voltage-gated, type IV, beta subunit
chr9_-_3469181 0.21 ENST00000366116.2
AL365202.1
Uncharacterized protein
chr18_+_32173276 0.20 ENST00000591816.1
ENST00000588125.1
ENST00000598334.1
ENST00000588684.1
ENST00000554864.3
ENST00000399121.5
ENST00000595022.1
ENST00000269190.7
ENST00000399097.3
DTNA
dystrobrevin, alpha
chr15_+_36887069 0.20 ENST00000566807.1
ENST00000567389.1
ENST00000562877.1
C15orf41
chromosome 15 open reading frame 41
chr3_+_111718173 0.20 ENST00000494932.1
TAGLN3
transgelin 3
chr2_-_136678123 0.19 ENST00000422708.1
DARS
aspartyl-tRNA synthetase
chr12_-_89746173 0.19 ENST00000308385.6
DUSP6
dual specificity phosphatase 6
chr11_-_31531121 0.19 ENST00000532287.1
ENST00000526776.1
ENST00000534812.1
ENST00000529749.1
ENST00000278200.1
ENST00000530023.1
ENST00000533642.1
IMMP1L
IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
chr12_-_86650077 0.19 ENST00000552808.2
ENST00000547225.1
MGAT4C
mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
chr15_+_96904487 0.19 ENST00000600790.1
AC087477.1
Uncharacterized protein
chr12_-_52828147 0.18 ENST00000252245.5
KRT75
keratin 75
chr19_-_56110859 0.18 ENST00000221665.3
ENST00000592585.1
FIZ1
FLT3-interacting zinc finger 1
chr11_+_77532233 0.17 ENST00000525409.1
AAMDC
adipogenesis associated, Mth938 domain containing
chr14_-_51027838 0.17 ENST00000555216.1
MAP4K5
mitogen-activated protein kinase kinase kinase kinase 5
chr1_+_152943122 0.16 ENST00000328051.2
SPRR4
small proline-rich protein 4
chr12_+_78359999 0.16 ENST00000550503.1
NAV3
neuron navigator 3
chr7_-_27169801 0.16 ENST00000511914.1
HOXA4
homeobox A4
chr14_+_74815116 0.16 ENST00000256362.4
VRTN
vertebrae development associated
chr4_-_87770416 0.16 ENST00000273905.6
SLC10A6
solute carrier family 10 (sodium/bile acid cotransporter), member 6
chr5_+_59783540 0.15 ENST00000515734.2
PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr6_-_10435032 0.15 ENST00000491317.1
ENST00000496285.1
ENST00000479822.1
ENST00000487130.1
LINC00518
long intergenic non-protein coding RNA 518
chr3_+_111717511 0.15 ENST00000478951.1
ENST00000393917.2
TAGLN3
transgelin 3
chr1_-_45956868 0.15 ENST00000451835.2
TESK2
testis-specific kinase 2
chrX_-_106243451 0.15 ENST00000355610.4
ENST00000535534.1
MORC4
MORC family CW-type zinc finger 4
chr9_-_98189055 0.15 ENST00000433644.2
RP11-435O5.2
RP11-435O5.2
chr2_-_227050079 0.15 ENST00000423838.1
AC068138.1
AC068138.1
chr14_-_98444386 0.15 ENST00000556462.1
ENST00000556138.1
C14orf64
chromosome 14 open reading frame 64
chr20_+_58630972 0.14 ENST00000313426.1
C20orf197
chromosome 20 open reading frame 197
chr11_+_24518723 0.14 ENST00000336930.6
ENST00000529015.1
ENST00000533227.1
LUZP2
leucine zipper protein 2
chr17_+_42785976 0.14 ENST00000393547.2
ENST00000398338.3
DBF4B
DBF4 homolog B (S. cerevisiae)
chr7_+_77428066 0.14 ENST00000422959.2
ENST00000307305.8
ENST00000424760.1
PHTF2
putative homeodomain transcription factor 2
chr12_-_16759440 0.14 ENST00000537304.1
LMO3
LIM domain only 3 (rhombotin-like 2)
chrX_-_106243294 0.14 ENST00000255495.7
MORC4
MORC family CW-type zinc finger 4
chrX_-_13835147 0.14 ENST00000493677.1
ENST00000355135.2
GPM6B
glycoprotein M6B
chr2_+_66918558 0.13 ENST00000435389.1
ENST00000428590.1
ENST00000412944.1
AC007392.3
AC007392.3
chr3_-_57233966 0.13 ENST00000473921.1
ENST00000295934.3
HESX1
HESX homeobox 1
chr11_+_33061543 0.13 ENST00000432887.1
ENST00000528898.1
ENST00000531632.2
TCP11L1
t-complex 11, testis-specific-like 1
chr4_-_170897045 0.13 ENST00000508313.1
RP11-205M3.3
RP11-205M3.3
chr7_+_116660246 0.13 ENST00000434836.1
ENST00000393443.1
ENST00000465133.1
ENST00000477742.1
ENST00000393447.4
ENST00000393444.3
ST7
suppression of tumorigenicity 7
chr1_+_84767289 0.12 ENST00000394834.3
ENST00000370669.1
SAMD13
sterile alpha motif domain containing 13
chr4_-_57547870 0.12 ENST00000381260.3
ENST00000420433.1
ENST00000554144.1
ENST00000557328.1
HOPX
HOP homeobox
chr7_+_12726623 0.12 ENST00000439721.1
ARL4A
ADP-ribosylation factor-like 4A
chr2_+_152214098 0.12 ENST00000243347.3
TNFAIP6
tumor necrosis factor, alpha-induced protein 6
chr1_-_152386732 0.12 ENST00000271835.3
CRNN
cornulin
chr1_-_242612726 0.12 ENST00000459864.1
PLD5
phospholipase D family, member 5
chr3_+_141105705 0.12 ENST00000513258.1
ZBTB38
zinc finger and BTB domain containing 38
chr12_-_22063787 0.12 ENST00000544039.1
ABCC9
ATP-binding cassette, sub-family C (CFTR/MRP), member 9
chr3_+_111717600 0.12 ENST00000273368.4
TAGLN3
transgelin 3
chr15_+_58702742 0.12 ENST00000356113.6
ENST00000414170.3
LIPC
lipase, hepatic
chr2_-_114461655 0.12 ENST00000424612.1
AC017074.2
AC017074.2
chr3_+_111718036 0.11 ENST00000455401.2
TAGLN3
transgelin 3
chr4_+_169013666 0.11 ENST00000359299.3
ANXA10
annexin A10
chr3_+_69985734 0.11 ENST00000314557.6
ENST00000394351.3
MITF
microphthalmia-associated transcription factor
chr5_+_119867159 0.11 ENST00000505123.1
PRR16
proline rich 16
chrX_-_20237059 0.11 ENST00000457145.1
RPS6KA3
ribosomal protein S6 kinase, 90kDa, polypeptide 3
chr3_-_12587055 0.11 ENST00000564146.3
C3orf83
chromosome 3 open reading frame 83
chr1_+_209878182 0.11 ENST00000367027.3
HSD11B1
hydroxysteroid (11-beta) dehydrogenase 1
chr9_-_75488984 0.11 ENST00000423171.1
ENST00000449235.1
ENST00000453787.1
RP11-151D14.1
RP11-151D14.1
chr11_-_117747607 0.11 ENST00000540359.1
ENST00000539526.1
FXYD6
FXYD domain containing ion transport regulator 6
chr6_+_12007897 0.11 ENST00000437559.1
RP11-456H18.2
RP11-456H18.2
chrX_+_78003204 0.11 ENST00000435339.3
ENST00000514744.1
LPAR4
lysophosphatidic acid receptor 4
chr1_-_224624730 0.10 ENST00000445239.1
WDR26
WD repeat domain 26
chr12_-_31478428 0.10 ENST00000543615.1
FAM60A
family with sequence similarity 60, member A
chr13_+_78109804 0.10 ENST00000535157.1
SCEL
sciellin
chr9_+_125133467 0.10 ENST00000426608.1
PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr8_-_10512569 0.10 ENST00000382483.3
RP1L1
retinitis pigmentosa 1-like 1
chrX_-_20236970 0.10 ENST00000379548.4
RPS6KA3
ribosomal protein S6 kinase, 90kDa, polypeptide 3
chr7_+_77428149 0.10 ENST00000415251.2
ENST00000275575.7
PHTF2
putative homeodomain transcription factor 2
chr1_+_244515930 0.10 ENST00000366537.1
ENST00000308105.4
C1orf100
chromosome 1 open reading frame 100
chr8_-_116681686 0.10 ENST00000519815.1
TRPS1
trichorhinophalangeal syndrome I
chr12_+_49621658 0.10 ENST00000541364.1
TUBA1C
tubulin, alpha 1c
chr11_+_77532155 0.10 ENST00000532481.1
ENST00000526415.1
ENST00000393427.2
ENST00000527134.1
ENST00000304716.8
AAMDC
adipogenesis associated, Mth938 domain containing
chr12_-_51422017 0.10 ENST00000394904.3
SLC11A2
solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
chr7_+_116502605 0.10 ENST00000458284.2
ENST00000490693.1
CAPZA2
capping protein (actin filament) muscle Z-line, alpha 2
chrX_+_100224676 0.10 ENST00000450049.2
ARL13A
ADP-ribosylation factor-like 13A
chr1_+_107683436 0.09 ENST00000370068.1
NTNG1
netrin G1
chr5_-_56778635 0.09 ENST00000423391.1
ACTBL2
actin, beta-like 2
chr5_+_125758865 0.09 ENST00000542322.1
ENST00000544396.1
GRAMD3
GRAM domain containing 3
chr13_+_78315466 0.09 ENST00000314070.5
ENST00000462234.1
SLAIN1
SLAIN motif family, member 1
chr10_-_7453445 0.09 ENST00000379713.3
ENST00000397167.1
ENST00000397160.3
SFMBT2
Scm-like with four mbt domains 2
chr15_+_80351977 0.09 ENST00000559157.1
ENST00000561012.1
ENST00000564367.1
ENST00000558494.1
ZFAND6
zinc finger, AN1-type domain 6
chr3_+_141106643 0.09 ENST00000514251.1
ZBTB38
zinc finger and BTB domain containing 38
chr14_+_67831576 0.09 ENST00000555876.1
EIF2S1
eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
chr7_+_23719749 0.09 ENST00000409192.3
ENST00000344962.4
ENST00000409653.1
ENST00000409994.3
FAM221A
family with sequence similarity 221, member A
chr8_-_102803163 0.09 ENST00000523645.1
ENST00000520346.1
ENST00000220931.6
ENST00000522448.1
ENST00000522951.1
ENST00000522252.1
ENST00000519098.1
NCALD
neurocalcin delta
chr7_+_115862858 0.09 ENST00000393481.2
TES
testis derived transcript (3 LIM domains)
chr13_+_78109884 0.09 ENST00000377246.3
ENST00000349847.3
SCEL
sciellin
chr7_+_129015671 0.09 ENST00000466993.1
AHCYL2
adenosylhomocysteinase-like 2
chr14_+_72052983 0.09 ENST00000358550.2
SIPA1L1
signal-induced proliferation-associated 1 like 1
chr9_+_82188077 0.09 ENST00000425506.1
TLE4
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)
chr2_-_216946500 0.09 ENST00000265322.7
PECR
peroxisomal trans-2-enoyl-CoA reductase
chr20_-_45980621 0.09 ENST00000446894.1
ZMYND8
zinc finger, MYND-type containing 8
chr18_+_22040593 0.09 ENST00000256906.4
HRH4
histamine receptor H4
chr20_+_56964253 0.09 ENST00000395802.3
VAPB
VAMP (vesicle-associated membrane protein)-associated protein B and C
chr15_-_33180439 0.08 ENST00000559610.1
FMN1
formin 1
chr18_+_32402321 0.08 ENST00000587723.1
DTNA
dystrobrevin, alpha
chr18_-_68004529 0.08 ENST00000578633.1
RP11-484N16.1
RP11-484N16.1
chrX_+_107288197 0.08 ENST00000415430.3
VSIG1
V-set and immunoglobulin domain containing 1
chrX_-_19817869 0.08 ENST00000379698.4
SH3KBP1
SH3-domain kinase binding protein 1
chr12_+_116955659 0.08 ENST00000552992.1
RP11-148B3.1
RP11-148B3.1
chr9_+_5890802 0.08 ENST00000381477.3
ENST00000381476.1
ENST00000381471.1
MLANA
melan-A
chr21_-_23058648 0.08 ENST00000416182.1
AF241725.6
AF241725.6
chr1_+_198608146 0.08 ENST00000367376.2
ENST00000352140.3
ENST00000594404.1
ENST00000598951.1
ENST00000530727.1
ENST00000442510.2
ENST00000367367.4
ENST00000348564.6
ENST00000367364.1
ENST00000413409.2
PTPRC
protein tyrosine phosphatase, receptor type, C
chr11_+_15136462 0.08 ENST00000379556.3
ENST00000424273.1
INSC
inscuteable homolog (Drosophila)
chr4_-_41884620 0.08 ENST00000504870.1
LINC00682
long intergenic non-protein coding RNA 682
chr8_+_42873548 0.08 ENST00000533338.1
ENST00000534420.1
HOOK3
RP11-598P20.5
hook microtubule-tethering protein 3
Uncharacterized protein
chr16_-_28192360 0.08 ENST00000570033.1
XPO6
exportin 6
chr10_-_71169031 0.08 ENST00000373307.1
TACR2
tachykinin receptor 2
chr2_-_190446738 0.08 ENST00000427419.1
ENST00000455320.1
SLC40A1
solute carrier family 40 (iron-regulated transporter), member 1
chr11_+_62496114 0.08 ENST00000532583.1
TTC9C
tetratricopeptide repeat domain 9C
chr7_-_111032971 0.08 ENST00000450877.1
IMMP2L
IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
chr3_-_33686925 0.08 ENST00000485378.2
ENST00000313350.6
ENST00000487200.1
CLASP2
cytoplasmic linker associated protein 2
chr1_-_232651312 0.08 ENST00000262861.4
SIPA1L2
signal-induced proliferation-associated 1 like 2
chr15_+_93443419 0.08 ENST00000557381.1
ENST00000420239.2
CHD2
chromodomain helicase DNA binding protein 2
chr18_-_33709268 0.08 ENST00000269187.5
ENST00000590986.1
ENST00000440549.2
SLC39A6
solute carrier family 39 (zinc transporter), member 6
chr7_-_28220354 0.08 ENST00000283928.5
JAZF1
JAZF zinc finger 1
chr2_+_54951679 0.08 ENST00000356458.6
EML6
echinoderm microtubule associated protein like 6
chr12_+_41136144 0.08 ENST00000548005.1
ENST00000552248.1
CNTN1
contactin 1
chr11_+_75526212 0.08 ENST00000356136.3
UVRAG
UV radiation resistance associated
chr7_+_129015484 0.08 ENST00000490911.1
AHCYL2
adenosylhomocysteinase-like 2
chr5_+_125758813 0.08 ENST00000285689.3
ENST00000515200.1
GRAMD3
GRAM domain containing 3
chr11_+_112041253 0.08 ENST00000532612.1
AP002884.3
AP002884.3
chr5_+_118668846 0.08 ENST00000513374.1
TNFAIP8
tumor necrosis factor, alpha-induced protein 8
chr8_-_90996459 0.07 ENST00000517337.1
ENST00000409330.1
NBN
nibrin
chr2_-_61697862 0.07 ENST00000398571.2
USP34
ubiquitin specific peptidase 34
chr2_+_171034646 0.07 ENST00000409044.3
ENST00000408978.4
MYO3B
myosin IIIB
chr17_+_57233087 0.07 ENST00000578777.1
ENST00000577457.1
ENST00000582995.1
PRR11
proline rich 11
chr4_+_147145709 0.07 ENST00000504313.1
RP11-6L6.2
Uncharacterized protein
chr13_-_46716969 0.07 ENST00000435666.2
LCP1
lymphocyte cytosolic protein 1 (L-plastin)
chr12_-_56694083 0.07 ENST00000552688.1
ENST00000548041.1
ENST00000551137.1
ENST00000551968.1
ENST00000542324.2
ENST00000546930.1
ENST00000549221.1
ENST00000550159.1
ENST00000550734.1
CS
citrate synthase
chr14_-_64194745 0.07 ENST00000247225.6
SGPP1
sphingosine-1-phosphate phosphatase 1
chrX_-_46187069 0.07 ENST00000446884.1
RP1-30G7.2
RP1-30G7.2
chr12_-_56693758 0.07 ENST00000547298.1
ENST00000551936.1
ENST00000551253.1
ENST00000551473.1
CS
citrate synthase
chr6_-_97731019 0.07 ENST00000275053.4
MMS22L
MMS22-like, DNA repair protein
chr6_+_155538093 0.07 ENST00000462408.2
TIAM2
T-cell lymphoma invasion and metastasis 2
chrX_+_107288239 0.07 ENST00000217957.5
VSIG1
V-set and immunoglobulin domain containing 1
chr11_+_123430948 0.07 ENST00000529432.1
ENST00000534764.1
GRAMD1B
GRAM domain containing 1B
chr7_-_92747269 0.07 ENST00000446617.1
ENST00000379958.2
SAMD9
sterile alpha motif domain containing 9
chr7_-_111424506 0.07 ENST00000450156.1
ENST00000494651.2
DOCK4
dedicator of cytokinesis 4
chr14_+_59100774 0.07 ENST00000556859.1
ENST00000421793.1
DACT1
dishevelled-binding antagonist of beta-catenin 1
chr2_+_210444298 0.07 ENST00000445941.1
MAP2
microtubule-associated protein 2
chr2_-_151395525 0.07 ENST00000439275.1
RND3
Rho family GTPase 3
chr4_-_143226979 0.07 ENST00000514525.1
INPP4B
inositol polyphosphate-4-phosphatase, type II, 105kDa
chr4_-_74486109 0.06 ENST00000395777.2
RASSF6
Ras association (RalGDS/AF-6) domain family member 6
chr15_-_31393910 0.06 ENST00000397795.2
ENST00000256552.6
ENST00000559179.1
TRPM1
transient receptor potential cation channel, subfamily M, member 1
chr5_-_115890554 0.06 ENST00000509665.1
SEMA6A
sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
chr8_-_90996837 0.06 ENST00000519426.1
ENST00000265433.3
NBN
nibrin
chr8_-_42358742 0.06 ENST00000517366.1
SLC20A2
solute carrier family 20 (phosphate transporter), member 2
chr3_+_111393501 0.06 ENST00000393934.3
PLCXD2
phosphatidylinositol-specific phospholipase C, X domain containing 2
chr14_-_75083313 0.06 ENST00000556652.1
ENST00000555313.1
CTD-2207P18.2
CTD-2207P18.2
chr2_-_203735586 0.06 ENST00000454326.1
ENST00000432273.1
ENST00000450143.1
ENST00000411681.1
ICA1L
islet cell autoantigen 1,69kDa-like
chr4_-_143227088 0.06 ENST00000511838.1
INPP4B
inositol polyphosphate-4-phosphatase, type II, 105kDa
chr2_-_200335983 0.06 ENST00000457245.1
SATB2
SATB homeobox 2
chr3_+_185431080 0.06 ENST00000296270.1
C3orf65
chromosome 3 open reading frame 65
chr3_-_149293990 0.06 ENST00000472417.1
WWTR1
WW domain containing transcription regulator 1
chr6_+_130339710 0.06 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
L3MBTL3
l(3)mbt-like 3 (Drosophila)
chr19_+_48949087 0.06 ENST00000598711.1
GRWD1
glutamate-rich WD repeat containing 1
chr3_+_182971018 0.06 ENST00000326505.3
B3GNT5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
chr16_+_57279004 0.06 ENST00000219204.3
ARL2BP
ADP-ribosylation factor-like 2 binding protein
chr2_-_136633940 0.06 ENST00000264156.2
MCM6
minichromosome maintenance complex component 6
chr2_+_68961905 0.06 ENST00000295381.3
ARHGAP25
Rho GTPase activating protein 25
chr14_-_78083112 0.06 ENST00000216484.2
SPTLC2
serine palmitoyltransferase, long chain base subunit 2
chr7_-_84121858 0.06 ENST00000448879.1
SEMA3A
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
chr1_+_180601139 0.06 ENST00000367590.4
ENST00000367589.3
XPR1
xenotropic and polytropic retrovirus receptor 1
chr10_-_27529486 0.06 ENST00000375888.1
ACBD5
acyl-CoA binding domain containing 5
chr12_-_102591604 0.06 ENST00000329406.4
PMCH
pro-melanin-concentrating hormone
chr10_+_118083919 0.06 ENST00000333254.3
CCDC172
coiled-coil domain containing 172
chr9_+_125133315 0.06 ENST00000223423.4
ENST00000362012.2
PTGS1
prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)
chr19_-_53758094 0.06 ENST00000601828.1
ENST00000598513.1
ENST00000599012.1
ENST00000333952.4
ENST00000598806.1
ZNF677
zinc finger protein 677
chr2_+_204571375 0.06 ENST00000374478.4
CD28
CD28 molecule
chr6_-_41039567 0.06 ENST00000468811.1
OARD1
O-acyl-ADP-ribose deacylase 1
chr17_-_40337470 0.06 ENST00000293330.1
HCRT
hypocretin (orexin) neuropeptide precursor
chr3_+_186692745 0.06 ENST00000438590.1
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr2_-_208031943 0.06 ENST00000421199.1
ENST00000457962.1
KLF7
Kruppel-like factor 7 (ubiquitous)
chr19_-_14064114 0.06 ENST00000585607.1
ENST00000538517.2
ENST00000587458.1
ENST00000538371.2
PODNL1
podocan-like 1
chr19_+_8740061 0.06 ENST00000593792.1
CTD-2586B10.1
CTD-2586B10.1
chr1_-_151762943 0.06 ENST00000368825.3
ENST00000368823.1
ENST00000458431.2
ENST00000368827.6
ENST00000368824.3
TDRKH
tudor and KH domain containing
chr12_-_53994805 0.06 ENST00000328463.7
ATF7
activating transcription factor 7
chr15_+_101420028 0.06 ENST00000557963.1
ENST00000346623.6
ALDH1A3
aldehyde dehydrogenase 1 family, member A3
chr12_-_54653313 0.06 ENST00000550411.1
ENST00000439541.2
CBX5
chromobox homolog 5
chr5_+_69321074 0.06 ENST00000380751.5
ENST00000380750.3
ENST00000503931.1
ENST00000506542.1
SERF1B
small EDRK-rich factor 1B (centromeric)
chr1_-_68698197 0.06 ENST00000370973.2
ENST00000370971.1
WLS
wntless Wnt ligand secretion mediator
chr8_-_116504448 0.06 ENST00000518018.1
TRPS1
trichorhinophalangeal syndrome I
chr18_-_53253112 0.06 ENST00000568673.1
ENST00000562847.1
ENST00000568147.1
TCF4
transcription factor 4
chr3_+_141106458 0.06 ENST00000509883.1
ZBTB38
zinc finger and BTB domain containing 38
chr7_+_30589829 0.06 ENST00000579437.1
RP4-777O23.1
RP4-777O23.1
chr14_-_98444438 0.06 ENST00000512901.2
C14orf64
chromosome 14 open reading frame 64

Network of associatons between targets according to the STRING database.

First level regulatory network of SHOX

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 GO:0006422 aspartyl-tRNA aminoacylation(GO:0006422)
0.0 0.3 GO:1900169 regulation of glucocorticoid mediated signaling pathway(GO:1900169)
0.0 0.5 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.0 0.3 GO:0006627 protein processing involved in protein targeting to mitochondrion(GO:0006627)
0.0 0.0 GO:0021847 ventricular zone neuroblast division(GO:0021847)
0.0 0.1 GO:0035106 negative regulation of luteinizing hormone secretion(GO:0033685) operant conditioning(GO:0035106)
0.0 0.1 GO:0034372 very-low-density lipoprotein particle remodeling(GO:0034372)
0.0 0.1 GO:0031860 telomeric 3' overhang formation(GO:0031860)
0.0 0.1 GO:1990737 response to manganese-induced endoplasmic reticulum stress(GO:1990737)
0.0 0.3 GO:0002051 osteoblast fate commitment(GO:0002051)
0.0 0.2 GO:0033353 S-adenosylmethionine cycle(GO:0033353)
0.0 0.1 GO:0006667 sphinganine metabolic process(GO:0006667)
0.0 0.1 GO:0070839 regulation of transcription from RNA polymerase II promoter in response to iron(GO:0034395) divalent metal ion export(GO:0070839)
0.0 0.1 GO:0051970 negative regulation of transmission of nerve impulse(GO:0051970)
0.0 0.1 GO:0060166 olfactory pit development(GO:0060166)
0.0 0.1 GO:0060578 subthalamic nucleus development(GO:0021763) prolactin secreting cell differentiation(GO:0060127) pulmonary vein morphogenesis(GO:0060577) superior vena cava morphogenesis(GO:0060578)
0.0 0.1 GO:0019442 tryptophan catabolic process to acetyl-CoA(GO:0019442)
0.0 0.1 GO:1903435 positive regulation of constitutive secretory pathway(GO:1903435)
0.0 0.1 GO:0015692 lead ion transport(GO:0015692)
0.0 0.0 GO:0070105 positive regulation of interleukin-6-mediated signaling pathway(GO:0070105)
0.0 0.1 GO:1902952 positive regulation of dendritic spine maintenance(GO:1902952)
0.0 0.1 GO:0022027 interkinetic nuclear migration(GO:0022027)
0.0 0.1 GO:0006668 sphinganine-1-phosphate metabolic process(GO:0006668)
0.0 0.1 GO:0001878 response to yeast(GO:0001878)
0.0 0.1 GO:0035701 immunoglobulin biosynthetic process(GO:0002378) hematopoietic stem cell migration(GO:0035701)
0.0 0.1 GO:1904694 negative regulation of vascular smooth muscle contraction(GO:1904694)
0.0 0.1 GO:2001224 positive regulation of neuron migration(GO:2001224)
0.0 0.1 GO:1903566 positive regulation of protein localization to cilium(GO:1903566)
0.0 0.1 GO:0051581 negative regulation of neurotransmitter uptake(GO:0051581) regulation of serotonin uptake(GO:0051611) negative regulation of serotonin uptake(GO:0051612)
0.0 0.1 GO:0072092 ureteric bud invasion(GO:0072092)
0.0 0.0 GO:0061357 positive regulation of Wnt protein secretion(GO:0061357)
0.0 0.0 GO:0060926 cardiac pacemaker cell development(GO:0060926)
0.0 0.1 GO:0048619 embryonic hindgut morphogenesis(GO:0048619)
0.0 0.1 GO:0051684 maintenance of Golgi location(GO:0051684)
0.0 0.1 GO:0010571 positive regulation of nuclear cell cycle DNA replication(GO:0010571)
0.0 0.0 GO:0036371 protein localization to T-tubule(GO:0036371)
0.0 0.0 GO:0098582 innate vocalization behavior(GO:0098582)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0042720 mitochondrial inner membrane peptidase complex(GO:0042720)
0.0 0.1 GO:0043614 multi-eIF complex(GO:0043614) translation preinitiation complex(GO:0070993)
0.0 0.1 GO:0035101 FACT complex(GO:0035101)
0.0 0.1 GO:0035841 new growing cell tip(GO:0035841)
0.0 0.1 GO:0008282 ATP-sensitive potassium channel complex(GO:0008282)
0.0 0.1 GO:0071547 piP-body(GO:0071547)
0.0 0.1 GO:0070826 paraferritin complex(GO:0070826)
0.0 0.1 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)
0.0 0.0 GO:0043257 laminin-8 complex(GO:0043257)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.2 GO:0004803 transposase activity(GO:0004803)
0.0 0.1 GO:0008281 sulfonylurea receptor activity(GO:0008281)
0.0 0.1 GO:0003845 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845)
0.0 0.2 GO:0004815 aspartate-tRNA ligase activity(GO:0004815)
0.0 0.2 GO:0004666 prostaglandin-endoperoxide synthase activity(GO:0004666)
0.0 0.1 GO:0033149 FFAT motif binding(GO:0033149)
0.0 0.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.1 GO:0004995 tachykinin receptor activity(GO:0004995)
0.0 0.2 GO:0008454 alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0008454)
0.0 0.2 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.0 0.2 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.0 0.1 GO:0016316 phosphatidylinositol-3,4-bisphosphate 4-phosphatase activity(GO:0016316) inositol-1,3,4-trisphosphate 4-phosphatase activity(GO:0017161) inositol-3,4-bisphosphate 4-phosphatase activity(GO:0052828)
0.0 0.3 GO:0005078 MAP-kinase scaffold activity(GO:0005078)
0.0 0.1 GO:0015087 cadmium ion transmembrane transporter activity(GO:0015086) cobalt ion transmembrane transporter activity(GO:0015087) lead ion transmembrane transporter activity(GO:0015094) ferrous iron uptake transmembrane transporter activity(GO:0015639)
0.0 0.3 GO:0030618 transforming growth factor beta receptor, pathway-specific cytoplasmic mediator activity(GO:0030618)
0.0 0.1 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.1 GO:0015093 ferrous iron transmembrane transporter activity(GO:0015093)
0.0 0.1 GO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential(GO:0086006)
0.0 0.1 GO:0008457 beta-galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,3-acetylglucosaminyltransferase activity(GO:0008457) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity(GO:0047256)
0.0 0.1 GO:0035727 lysophosphatidic acid binding(GO:0035727)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID ALK2 PATHWAY ALK2 signaling events