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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for MSX1

Z-value: 0.86

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Transcription factors associated with MSX1

Gene Symbol Gene ID Gene Info
MSX1
ENSG00000163132.6 msh homeobox 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MSX1hg19_v2_chr4_+_4861385_48613980.128.2e-01Click!

Activity profile of MSX1 motif

Sorted Z-values of MSX1 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_119669160 1.01 ENST00000514240.1
CTC-552D5.1
CTC-552D5.1
chr7_+_106415457 0.79 ENST00000490162.2
ENST00000470135.1
RP5-884M6.1
RP5-884M6.1
chr8_-_25281747 0.75 ENST00000421054.2
GNRH1
gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
chr21_+_17792672 0.63 ENST00000602620.1
LINC00478
long intergenic non-protein coding RNA 478
chr19_-_45457264 0.60 ENST00000591646.1
CTB-129P6.11
Uncharacterized protein
chr17_+_74729060 0.57 ENST00000587459.1
RP11-318A15.7
Uncharacterized protein
chr5_-_138739739 0.51 ENST00000514983.1
ENST00000507779.2
ENST00000451821.2
ENST00000450845.2
ENST00000509959.1
ENST00000302091.5
SPATA24
spermatogenesis associated 24
chr4_+_9446156 0.41 ENST00000334879.1
DEFB131
defensin, beta 131
chr22_-_32767017 0.33 ENST00000400234.1
RFPL3S
RFPL3 antisense
chr10_-_61899124 0.31 ENST00000373815.1
ANK3
ankyrin 3, node of Ranvier (ankyrin G)
chr2_+_196313239 0.31 ENST00000413290.1
AC064834.1
AC064834.1
chr6_+_28249299 0.30 ENST00000405948.2
PGBD1
piggyBac transposable element derived 1
chr6_+_26020672 0.29 ENST00000357647.3
HIST1H3A
histone cluster 1, H3a
chr21_+_39668478 0.29 ENST00000398927.1
KCNJ15
potassium inwardly-rectifying channel, subfamily J, member 15
chr16_-_71518504 0.28 ENST00000565100.2
ZNF19
zinc finger protein 19
chr15_+_77713222 0.27 ENST00000558176.1
HMG20A
high mobility group 20A
chr13_-_81801115 0.27 ENST00000567258.1
LINC00564
long intergenic non-protein coding RNA 564
chr7_-_16840820 0.27 ENST00000450569.1
AGR2
anterior gradient 2
chr11_-_85376121 0.26 ENST00000527447.1
CREBZF
CREB/ATF bZIP transcription factor
chr19_+_3762645 0.26 ENST00000330133.4
MRPL54
mitochondrial ribosomal protein L54
chr21_+_33671264 0.26 ENST00000339944.4
MRAP
melanocortin 2 receptor accessory protein
chr19_+_3762703 0.25 ENST00000589174.1
MRPL54
mitochondrial ribosomal protein L54
chr7_-_105332084 0.25 ENST00000472195.1
ATXN7L1
ataxin 7-like 1
chr14_+_101293687 0.23 ENST00000455286.1
MEG3
maternally expressed 3 (non-protein coding)
chr17_-_47786375 0.23 ENST00000511657.1
SLC35B1
solute carrier family 35, member B1
chr4_+_71384300 0.22 ENST00000504451.1
AMTN
amelotin
chr4_-_120243545 0.22 ENST00000274024.3
FABP2
fatty acid binding protein 2, intestinal
chr20_+_5731027 0.21 ENST00000378979.4
ENST00000303142.6
C20orf196
chromosome 20 open reading frame 196
chrX_+_1710484 0.21 ENST00000313871.3
ENST00000381261.3
AKAP17A
A kinase (PRKA) anchor protein 17A
chr7_+_16793160 0.21 ENST00000262067.4
TSPAN13
tetraspanin 13
chr14_-_73997901 0.20 ENST00000557603.1
ENST00000556455.1
HEATR4
HEAT repeat containing 4
chr12_+_9066472 0.20 ENST00000538657.1
PHC1
polyhomeotic homolog 1 (Drosophila)
chr3_-_21792838 0.20 ENST00000281523.2
ZNF385D
zinc finger protein 385D
chr3_-_180397256 0.20 ENST00000442201.2
CCDC39
coiled-coil domain containing 39
chr8_-_121824374 0.20 ENST00000517992.1
SNTB1
syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)
chr9_-_70465758 0.20 ENST00000489273.1
CBWD5
COBW domain containing 5
chr12_-_10978957 0.20 ENST00000240619.2
TAS2R10
taste receptor, type 2, member 10
chr5_+_121647386 0.19 ENST00000542191.1
ENST00000506272.1
ENST00000508681.1
ENST00000509154.2
SNCAIP
synuclein, alpha interacting protein
chr6_-_109776901 0.18 ENST00000431946.1
MICAL1
microtubule associated monooxygenase, calponin and LIM domain containing 1
chr14_-_101295407 0.18 ENST00000596284.1
AL117190.2
AL117190.2
chr2_-_219031709 0.17 ENST00000295683.2
CXCR1
chemokine (C-X-C motif) receptor 1
chr6_+_118869452 0.16 ENST00000357525.5
PLN
phospholamban
chr7_+_141408153 0.16 ENST00000397541.2
WEE2
WEE1 homolog 2 (S. pombe)
chr22_+_51176624 0.16 ENST00000216139.5
ENST00000529621.1
ACR
acrosin
chr6_+_108616243 0.15 ENST00000421954.1
LACE1
lactation elevated 1
chr9_+_44868935 0.15 ENST00000448436.2
RP11-160N1.10
RP11-160N1.10
chr19_+_18303992 0.15 ENST00000599612.2
MPV17L2
MPV17 mitochondrial membrane protein-like 2
chr16_-_66583994 0.15 ENST00000564917.1
TK2
thymidine kinase 2, mitochondrial
chr11_-_102401469 0.15 ENST00000260227.4
MMP7
matrix metallopeptidase 7 (matrilysin, uterine)
chr3_+_187957646 0.15 ENST00000457242.1
LPP
LIM domain containing preferred translocation partner in lipoma
chr13_-_52733980 0.15 ENST00000339406.3
NEK3
NIMA-related kinase 3
chr3_-_47555167 0.15 ENST00000296149.4
ELP6
elongator acetyltransferase complex subunit 6
chr14_+_50291993 0.15 ENST00000595378.1
AL627171.2
HCG1786899; PRO2610; Uncharacterized protein
chr12_+_105380073 0.14 ENST00000552951.1
ENST00000280749.5
C12orf45
chromosome 12 open reading frame 45
chr18_-_70532906 0.14 ENST00000299430.2
ENST00000397929.1
NETO1
neuropilin (NRP) and tolloid (TLL)-like 1
chr4_-_186696425 0.14 ENST00000430503.1
ENST00000319454.6
ENST00000450341.1
SORBS2
sorbin and SH3 domain containing 2
chr2_+_242498135 0.14 ENST00000318407.3
BOK
BCL2-related ovarian killer
chr6_+_130339710 0.14 ENST00000526087.1
ENST00000533560.1
ENST00000361794.2
L3MBTL3
l(3)mbt-like 3 (Drosophila)
chr19_-_39805976 0.14 ENST00000248668.4
LRFN1
leucine rich repeat and fibronectin type III domain containing 1
chr16_+_28985542 0.14 ENST00000567771.1
ENST00000568388.1
SPNS1
spinster homolog 1 (Drosophila)
chr17_-_55162360 0.13 ENST00000576871.1
ENST00000576313.1
RP11-166P13.3
RP11-166P13.3
chr5_-_177207634 0.13 ENST00000513554.1
ENST00000440605.3
FAM153A
family with sequence similarity 153, member A
chr11_-_128894053 0.13 ENST00000392657.3
ARHGAP32
Rho GTPase activating protein 32
chr17_+_72931876 0.13 ENST00000328801.4
OTOP3
otopetrin 3
chr12_-_52604607 0.13 ENST00000551894.1
ENST00000553017.1
C12orf80
chromosome 12 open reading frame 80
chr5_+_121465207 0.13 ENST00000296600.4
ZNF474
zinc finger protein 474
chr19_+_107471 0.12 ENST00000585993.1
OR4F17
olfactory receptor, family 4, subfamily F, member 17
chr5_+_140220769 0.12 ENST00000531613.1
ENST00000378123.3
PCDHA8
protocadherin alpha 8
chrX_+_23928500 0.12 ENST00000435707.1
CXorf58
chromosome X open reading frame 58
chr13_-_52733670 0.12 ENST00000550841.1
NEK3
NIMA-related kinase 3
chr6_+_28092338 0.12 ENST00000340487.4
ZSCAN16
zinc finger and SCAN domain containing 16
chr6_-_32908765 0.12 ENST00000416244.2
HLA-DMB
major histocompatibility complex, class II, DM beta
chr6_-_150212029 0.12 ENST00000529948.1
ENST00000357183.4
ENST00000367363.3
RAET1E
retinoic acid early transcript 1E
chr9_+_12695702 0.12 ENST00000381136.2
TYRP1
tyrosinase-related protein 1
chr11_+_58695096 0.12 ENST00000525608.1
ENST00000526351.1
GLYATL1
glycine-N-acyltransferase-like 1
chr4_-_186570679 0.12 ENST00000451974.1
SORBS2
sorbin and SH3 domain containing 2
chr6_+_28249332 0.11 ENST00000259883.3
PGBD1
piggyBac transposable element derived 1
chr1_-_54405773 0.11 ENST00000371376.1
HSPB11
heat shock protein family B (small), member 11
chr2_-_31361543 0.11 ENST00000349752.5
GALNT14
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)
chr6_-_109777128 0.11 ENST00000358807.3
ENST00000358577.3
MICAL1
microtubule associated monooxygenase, calponin and LIM domain containing 1
chr21_+_30502806 0.11 ENST00000399928.1
ENST00000399926.1
MAP3K7CL
MAP3K7 C-terminal like
chr16_-_66584059 0.11 ENST00000417693.3
ENST00000544898.1
ENST00000569718.1
ENST00000527284.1
ENST00000299697.7
ENST00000451102.2
TK2
thymidine kinase 2, mitochondrial
chr17_+_55162453 0.11 ENST00000575322.1
ENST00000337714.3
ENST00000314126.3
AKAP1
A kinase (PRKA) anchor protein 1
chr5_-_147162078 0.11 ENST00000507386.1
JAKMIP2
janus kinase and microtubule interacting protein 2
chr21_+_33671160 0.10 ENST00000303645.5
MRAP
melanocortin 2 receptor accessory protein
chr4_+_119809984 0.10 ENST00000307142.4
ENST00000448416.2
ENST00000429713.2
SYNPO2
synaptopodin 2
chr14_+_68086515 0.10 ENST00000261783.3
ARG2
arginase 2
chr16_-_66583701 0.10 ENST00000527800.1
ENST00000525974.1
ENST00000563369.2
TK2
thymidine kinase 2, mitochondrial
chr4_+_5526883 0.10 ENST00000195455.2
C4orf6
chromosome 4 open reading frame 6
chr6_-_31830655 0.10 ENST00000375631.4
NEU1
sialidase 1 (lysosomal sialidase)
chr2_+_32502952 0.10 ENST00000238831.4
YIPF4
Yip1 domain family, member 4
chr3_-_123339418 0.10 ENST00000583087.1
MYLK
myosin light chain kinase
chr6_-_32095968 0.09 ENST00000375203.3
ENST00000375201.4
ATF6B
activating transcription factor 6 beta
chr18_+_61637159 0.09 ENST00000397985.2
ENST00000353706.2
ENST00000542677.1
ENST00000397988.3
ENST00000448851.1
SERPINB8
serpin peptidase inhibitor, clade B (ovalbumin), member 8
chr6_-_76072719 0.09 ENST00000370020.1
FILIP1
filamin A interacting protein 1
chr1_+_160160283 0.09 ENST00000368079.3
CASQ1
calsequestrin 1 (fast-twitch, skeletal muscle)
chr12_+_7864021 0.09 ENST00000345088.2
DPPA3
developmental pluripotency associated 3
chrX_-_119149501 0.09 ENST00000454625.1
GS1-421I3.2
GS1-421I3.2
chr16_-_66584015 0.09 ENST00000545043.2
TK2
thymidine kinase 2, mitochondrial
chr4_+_5527117 0.08 ENST00000505296.1
C4orf6
chromosome 4 open reading frame 6
chr11_-_66964638 0.08 ENST00000444002.2
AP001885.1
AP001885.1
chr2_+_7073174 0.08 ENST00000416587.1
RNF144A
ring finger protein 144A
chr3_-_123339343 0.08 ENST00000578202.1
MYLK
myosin light chain kinase
chr1_+_160160346 0.08 ENST00000368078.3
CASQ1
calsequestrin 1 (fast-twitch, skeletal muscle)
chr8_+_1993152 0.08 ENST00000262113.4
MYOM2
myomesin 2
chr10_-_101380121 0.08 ENST00000370495.4
SLC25A28
solute carrier family 25 (mitochondrial iron transporter), member 28
chr9_-_23779367 0.08 ENST00000440102.1
ELAVL2
ELAV like neuron-specific RNA binding protein 2
chr8_+_97597148 0.08 ENST00000521590.1
SDC2
syndecan 2
chr8_-_72274095 0.08 ENST00000303824.7
EYA1
eyes absent homolog 1 (Drosophila)
chr9_-_128246769 0.08 ENST00000444226.1
MAPKAP1
mitogen-activated protein kinase associated protein 1
chr12_+_9980069 0.08 ENST00000354855.3
ENST00000324214.4
ENST00000279544.3
KLRF1
killer cell lectin-like receptor subfamily F, member 1
chr12_-_11150474 0.08 ENST00000538986.1
TAS2R20
taste receptor, type 2, member 20
chrX_-_103499602 0.08 ENST00000372588.4
ESX1
ESX homeobox 1
chr3_+_190105909 0.08 ENST00000456423.1
CLDN16
claudin 16
chr12_+_14561422 0.08 ENST00000541056.1
ATF7IP
activating transcription factor 7 interacting protein
chr19_+_55043977 0.07 ENST00000335056.3
KIR3DX1
killer cell immunoglobulin-like receptor, three domains, X1
chr20_+_34129770 0.07 ENST00000348547.2
ENST00000357394.4
ENST00000447986.1
ENST00000279052.6
ENST00000416206.1
ENST00000411577.1
ENST00000413587.1
ERGIC3
ERGIC and golgi 3
chr5_+_150404904 0.07 ENST00000521632.1
GPX3
glutathione peroxidase 3 (plasma)
chr4_+_119810134 0.07 ENST00000434046.2
SYNPO2
synaptopodin 2
chr1_-_109935819 0.07 ENST00000538502.1
SORT1
sortilin 1
chr1_-_19426149 0.07 ENST00000429347.2
UBR4
ubiquitin protein ligase E3 component n-recognin 4
chr8_+_1993173 0.07 ENST00000523438.1
MYOM2
myomesin 2
chr1_-_114429997 0.07 ENST00000471267.1
ENST00000393320.3
BCL2L15
BCL2-like 15
chr1_-_167487758 0.06 ENST00000362089.5
CD247
CD247 molecule
chr18_-_3874271 0.06 ENST00000400149.3
ENST00000400155.1
ENST00000400150.3
DLGAP1
discs, large (Drosophila) homolog-associated protein 1
chr18_-_3874247 0.06 ENST00000581699.1
DLGAP1
discs, large (Drosophila) homolog-associated protein 1
chr10_+_90346519 0.06 ENST00000371939.3
LIPJ
lipase, family member J
chr11_+_92085262 0.06 ENST00000298047.6
ENST00000409404.2
ENST00000541502.1
FAT3
FAT atypical cadherin 3
chr10_-_29923893 0.06 ENST00000355867.4
SVIL
supervillin
chr15_-_76304731 0.06 ENST00000394907.3
NRG4
neuregulin 4
chr9_+_133539981 0.06 ENST00000253008.2
PRDM12
PR domain containing 12
chr18_-_5396271 0.06 ENST00000579951.1
EPB41L3
erythrocyte membrane protein band 4.1-like 3
chr11_+_61197572 0.06 ENST00000542074.1
ENST00000534878.1
ENST00000537782.1
ENST00000543265.1
SDHAF2
succinate dehydrogenase complex assembly factor 2
chr8_+_117963190 0.06 ENST00000427715.2
SLC30A8
solute carrier family 30 (zinc transporter), member 8
chr3_+_108308513 0.06 ENST00000361582.3
DZIP3
DAZ interacting zinc finger protein 3
chr2_+_202098203 0.06 ENST00000450491.1
ENST00000440732.1
ENST00000392258.3
CASP8
caspase 8, apoptosis-related cysteine peptidase
chr1_-_72566613 0.06 ENST00000306821.3
NEGR1
neuronal growth regulator 1
chr7_-_32338917 0.06 ENST00000396193.1
PDE1C
phosphodiesterase 1C, calmodulin-dependent 70kDa
chr11_+_12132117 0.06 ENST00000256194.4
MICAL2
microtubule associated monooxygenase, calponin and LIM domain containing 2
chr7_+_36450169 0.06 ENST00000428612.1
ANLN
anillin, actin binding protein
chr1_-_35450897 0.06 ENST00000373337.3
ZMYM6NB
ZMYM6 neighbor
chrX_-_110507098 0.06 ENST00000541758.1
CAPN6
calpain 6
chr8_+_24241969 0.06 ENST00000522298.1
ADAMDEC1
ADAM-like, decysin 1
chr5_-_75919217 0.06 ENST00000504899.1
F2RL2
coagulation factor II (thrombin) receptor-like 2
chr7_+_7811992 0.06 ENST00000406829.1
RPA3-AS1
RPA3 antisense RNA 1
chr3_+_171561127 0.06 ENST00000334567.5
ENST00000450693.1
TMEM212
transmembrane protein 212
chrX_+_134654540 0.05 ENST00000370752.4
DDX26B
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
chr12_-_82752565 0.05 ENST00000256151.7
CCDC59
coiled-coil domain containing 59
chr1_+_8021954 0.05 ENST00000377491.1
ENST00000377488.1
PARK7
parkinson protein 7
chr20_+_5731083 0.05 ENST00000445603.1
ENST00000442185.1
C20orf196
chromosome 20 open reading frame 196
chr5_+_102594403 0.05 ENST00000319933.2
C5orf30
chromosome 5 open reading frame 30
chr11_+_60681346 0.05 ENST00000227525.3
TMEM109
transmembrane protein 109
chr10_+_97709725 0.05 ENST00000472454.2
RP11-248J23.6
Protein LOC100652732
chr2_-_136288113 0.05 ENST00000401392.1
ZRANB3
zinc finger, RAN-binding domain containing 3
chr9_+_75229616 0.05 ENST00000340019.3
TMC1
transmembrane channel-like 1
chr13_+_50570019 0.05 ENST00000442421.1
TRIM13
tripartite motif containing 13
chr8_+_24241789 0.05 ENST00000256412.4
ENST00000538205.1
ADAMDEC1
ADAM-like, decysin 1
chr6_+_131894284 0.05 ENST00000368087.3
ENST00000356962.2
ARG1
arginase 1
chr1_-_167487808 0.05 ENST00000392122.3
CD247
CD247 molecule
chr1_+_76540386 0.05 ENST00000328299.3
ST6GALNAC3
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
chr13_-_88323218 0.05 ENST00000436290.2
ENST00000453832.2
ENST00000606590.1
MIR4500HG
MIR4500 host gene (non-protein coding)
chr12_-_10541575 0.04 ENST00000540818.1
KLRK1
killer cell lectin-like receptor subfamily K, member 1
chr15_+_79166065 0.04 ENST00000559690.1
ENST00000559158.1
MORF4L1
mortality factor 4 like 1
chr1_-_2461684 0.04 ENST00000378453.3
HES5
hes family bHLH transcription factor 5
chr21_+_43619796 0.04 ENST00000398457.2
ABCG1
ATP-binding cassette, sub-family G (WHITE), member 1
chr10_-_43892668 0.04 ENST00000544000.1
HNRNPF
heterogeneous nuclear ribonucleoprotein F
chr15_+_77712993 0.04 ENST00000336216.4
ENST00000381714.3
ENST00000558651.1
HMG20A
high mobility group 20A
chr4_+_113568207 0.03 ENST00000511529.1
LARP7
La ribonucleoprotein domain family, member 7
chr13_-_45048386 0.03 ENST00000472477.1
TSC22D1
TSC22 domain family, member 1
chr9_-_15510287 0.03 ENST00000397519.2
PSIP1
PC4 and SFRS1 interacting protein 1
chr10_+_32873190 0.03 ENST00000375025.4
C10orf68
Homo sapiens coiled-coil domain containing 7 (CCDC7), transcript variant 5, mRNA.
chr6_-_32784687 0.03 ENST00000447394.1
ENST00000438763.2
HLA-DOB
major histocompatibility complex, class II, DO beta
chr5_+_175490540 0.03 ENST00000515817.1
FAM153B
family with sequence similarity 153, member B
chr8_-_99057742 0.03 ENST00000521291.1
ENST00000396070.2
ENST00000523172.1
ENST00000287038.3
RPL30
ribosomal protein L30
chr15_+_67813406 0.03 ENST00000342683.4
C15orf61
chromosome 15 open reading frame 61
chr17_-_37934466 0.03 ENST00000583368.1
IKZF3
IKAROS family zinc finger 3 (Aiolos)
chr4_+_159442878 0.03 ENST00000307765.5
ENST00000423548.1
RXFP1
relaxin/insulin-like family peptide receptor 1
chr3_+_93781728 0.02 ENST00000314622.4
NSUN3
NOP2/Sun domain family, member 3
chr17_-_30228678 0.02 ENST00000261708.4
UTP6
UTP6, small subunit (SSU) processome component, homolog (yeast)
chr10_+_135204338 0.02 ENST00000468317.2
RP11-108K14.8
Mitochondrial GTPase 1
chr3_+_114012819 0.02 ENST00000383671.3
TIGIT
T cell immunoreceptor with Ig and ITIM domains
chr4_+_159443024 0.02 ENST00000448688.2
RXFP1
relaxin/insulin-like family peptide receptor 1
chr1_-_209792111 0.02 ENST00000455193.1
LAMB3
laminin, beta 3
chrX_-_122756660 0.02 ENST00000441692.1
THOC2
THO complex 2
chr6_+_136172820 0.02 ENST00000308191.6
PDE7B
phosphodiesterase 7B
chr22_+_41697520 0.02 ENST00000352645.4
ZC3H7B
zinc finger CCCH-type containing 7B
chrX_+_73164149 0.02 ENST00000602938.1
ENST00000602294.1
ENST00000602920.1
ENST00000602737.1
ENST00000602772.1
JPX
JPX transcript, XIST activator (non-protein coding)
chr16_+_69345243 0.02 ENST00000254950.11
VPS4A
vacuolar protein sorting 4 homolog A (S. cerevisiae)
chr15_-_77712429 0.02 ENST00000564328.1
ENST00000558305.1
PEAK1
pseudopodium-enriched atypical kinase 1
chr1_+_44514040 0.02 ENST00000431800.1
ENST00000437643.1
RP5-1198O20.4
RP5-1198O20.4
chr11_+_22694123 0.02 ENST00000534801.1
GAS2
growth arrest-specific 2
chr1_+_46805832 0.02 ENST00000474844.1
NSUN4
NOP2/Sun domain family, member 4
chr15_+_51669444 0.01 ENST00000396399.2
GLDN
gliomedin
chr17_-_42441204 0.01 ENST00000293443.7
FAM171A2
family with sequence similarity 171, member A2
chr8_+_30244580 0.01 ENST00000523115.1
ENST00000519647.1
RBPMS
RNA binding protein with multiple splicing
chr5_+_140762268 0.01 ENST00000518325.1
PCDHGA7
protocadherin gamma subfamily A, 7
chr15_-_42500351 0.01 ENST00000348544.4
ENST00000318006.5
VPS39
vacuolar protein sorting 39 homolog (S. cerevisiae)
chr2_-_169746878 0.01 ENST00000282074.2
SPC25
SPC25, NDC80 kinetochore complex component
chr3_-_123512688 0.01 ENST00000475616.1
MYLK
myosin light chain kinase
chr20_+_56964169 0.01 ENST00000475243.1
VAPB
VAMP (vesicle-associated membrane protein)-associated protein B and C

Network of associatons between targets according to the STRING database.

First level regulatory network of MSX1

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:1990637 response to prolactin(GO:1990637)
0.1 0.4 GO:0046092 deoxycytidine metabolic process(GO:0046092)
0.1 0.4 GO:0019417 sulfur oxidation(GO:0019417)
0.1 0.4 GO:1903899 positive regulation of PERK-mediated unfolded protein response(GO:1903899)
0.1 0.2 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 0.2 GO:1902081 regulation of calcium ion import into sarcoplasmic reticulum(GO:1902080) negative regulation of calcium ion import into sarcoplasmic reticulum(GO:1902081)
0.1 0.2 GO:0035038 female pronucleus assembly(GO:0035038)
0.1 0.3 GO:0072658 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.0 0.1 GO:2001190 positive regulation of T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell(GO:2001190)
0.0 0.1 GO:0043438 acetoacetic acid metabolic process(GO:0043438)
0.0 0.2 GO:0042488 positive regulation of odontogenesis of dentin-containing tooth(GO:0042488) positive regulation of tooth mineralization(GO:0070172)
0.0 0.3 GO:0006335 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0 0.2 GO:0038112 interleukin-8-mediated signaling pathway(GO:0038112)
0.0 0.1 GO:2000312 regulation of kainate selective glutamate receptor activity(GO:2000312)
0.0 0.1 GO:0048250 mitochondrial iron ion transport(GO:0048250)
0.0 0.2 GO:0007341 penetration of zona pellucida(GO:0007341)
0.0 0.1 GO:0061668 mitochondrial ribosome assembly(GO:0061668)
0.0 0.2 GO:0035469 determination of pancreatic left/right asymmetry(GO:0035469)
0.0 0.3 GO:0090043 regulation of tubulin deacetylation(GO:0090043)
0.0 0.1 GO:0044725 chromatin reprogramming in the zygote(GO:0044725)
0.0 0.2 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.1 GO:0006689 ganglioside catabolic process(GO:0006689)
0.0 0.1 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.0 0.1 GO:0031106 septin ring assembly(GO:0000921) septin ring organization(GO:0031106)
0.0 0.1 GO:1903181 enzyme active site formation(GO:0018307) neuron intrinsic apoptotic signaling pathway in response to hydrogen peroxide(GO:0036482) detoxification of mercury ion(GO:0050787) positive regulation of mitochondrial electron transport, NADH to ubiquinone(GO:1902958) regulation of protein K48-linked deubiquitination(GO:1903093) negative regulation of protein K48-linked deubiquitination(GO:1903094) regulation of dopamine biosynthetic process(GO:1903179) positive regulation of dopamine biosynthetic process(GO:1903181) regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway(GO:1903383) negative regulation of hydrogen peroxide-induced neuron intrinsic apoptotic signaling pathway(GO:1903384) negative regulation of ubiquitin-specific protease activity(GO:2000157)
0.0 0.1 GO:0002074 extraocular skeletal muscle development(GO:0002074)
0.0 0.0 GO:2000502 negative regulation of natural killer cell chemotaxis(GO:2000502)
0.0 0.0 GO:2000974 negative regulation of pro-B cell differentiation(GO:2000974)
0.0 0.2 GO:0014809 regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion(GO:0014809)
0.0 0.0 GO:0055099 response to high density lipoprotein particle(GO:0055099)
0.0 0.3 GO:0033234 negative regulation of protein sumoylation(GO:0033234)
0.0 0.1 GO:0036292 DNA rewinding(GO:0036292)
0.0 0.1 GO:0006982 response to lipid hydroperoxide(GO:0006982)
0.0 0.3 GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580)
0.0 0.1 GO:0039507 modulation by virus of host molecular function(GO:0039506) suppression by virus of host molecular function(GO:0039507) suppression by virus of host catalytic activity(GO:0039513) modulation by virus of host catalytic activity(GO:0039516) suppression by virus of host cysteine-type endopeptidase activity involved in apoptotic process(GO:0039650) negative regulation by symbiont of host catalytic activity(GO:0052053) negative regulation by symbiont of host molecular function(GO:0052056) modulation by symbiont of host catalytic activity(GO:0052148)
0.0 0.1 GO:0008218 bioluminescence(GO:0008218)
0.0 0.1 GO:0030950 establishment or maintenance of actin cytoskeleton polarity(GO:0030950)
0.0 0.0 GO:0002581 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
0.0 0.1 GO:0051005 negative regulation of lipoprotein lipase activity(GO:0051005)
0.0 0.1 GO:0043249 erythrocyte maturation(GO:0043249)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0098554 cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.3 GO:0000788 nuclear nucleosome(GO:0000788)
0.0 0.0 GO:0097038 perinuclear endoplasmic reticulum(GO:0097038)
0.0 0.2 GO:0014802 terminal cisterna(GO:0014802)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.1 GO:0098839 postsynaptic density membrane(GO:0098839)
0.0 0.1 GO:0042105 alpha-beta T cell receptor complex(GO:0042105)
0.0 0.3 GO:0014731 spectrin-associated cytoskeleton(GO:0014731)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0031783 corticotropin hormone receptor binding(GO:0031780) type 5 melanocortin receptor binding(GO:0031783)
0.1 0.4 GO:0004797 deoxycytidine kinase activity(GO:0004137) thymidine kinase activity(GO:0004797)
0.1 0.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0016716 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen(GO:0016716)
0.0 0.2 GO:0004040 amidase activity(GO:0004040)
0.0 0.1 GO:0047946 glutamine N-acyltransferase activity(GO:0047946)
0.0 0.1 GO:0046624 sphingolipid transporter activity(GO:0046624)
0.0 0.1 GO:0052796 exo-alpha-(2->3)-sialidase activity(GO:0052794) exo-alpha-(2->6)-sialidase activity(GO:0052795) exo-alpha-(2->8)-sialidase activity(GO:0052796)
0.0 0.2 GO:0004918 interleukin-8 receptor activity(GO:0004918)
0.0 0.3 GO:0033038 bitter taste receptor activity(GO:0033038)
0.0 0.2 GO:0042030 ATPase inhibitor activity(GO:0042030)
0.0 0.2 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.0 0.0 GO:0034041 sterol-transporting ATPase activity(GO:0034041)
0.0 0.3 GO:0015467 G-protein activated inward rectifier potassium channel activity(GO:0015467)
0.0 0.1 GO:0016532 superoxide dismutase copper chaperone activity(GO:0016532)
0.0 0.4 GO:0071949 FAD binding(GO:0071949)
0.0 0.3 GO:0051371 muscle alpha-actinin binding(GO:0051371)
0.0 0.1 GO:0032393 MHC class I receptor activity(GO:0032393)
0.0 0.1 GO:0048406 nerve growth factor binding(GO:0048406)

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 REACTOME HORMONE LIGAND BINDING RECEPTORS Genes involved in Hormone ligand-binding receptors
0.0 0.4 REACTOME BETA DEFENSINS Genes involved in Beta defensins
0.0 0.4 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription