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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for HOXC13

Z-value: 0.87

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Transcription factors associated with HOXC13

Gene Symbol Gene ID Gene Info
HOXC13
ENSG00000123364.3 homeobox C13

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HOXC13hg19_v2_chr12_+_54332535_543326360.305.6e-01Click!

Activity profile of HOXC13 motif

Sorted Z-values of HOXC13 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr5_-_176433565 0.71 ENST00000428382.2
UIMC1
ubiquitin interaction motif containing 1
chr8_-_82608409 0.68 ENST00000518568.1
SLC10A5
solute carrier family 10, member 5
chr9_+_67977438 0.51 ENST00000456982.1
RP11-195B21.3
Protein LOC644249
chr3_+_158449972 0.49 ENST00000486568.1
MFSD1
major facilitator superfamily domain containing 1
chr1_+_152730499 0.48 ENST00000368773.1
KPRP
keratinocyte proline-rich protein
chr1_+_219347203 0.46 ENST00000366927.3
LYPLAL1
lysophospholipase-like 1
chr5_-_79287060 0.44 ENST00000512560.1
ENST00000509852.1
ENST00000512528.1
MTX3
metaxin 3
chr1_+_219347186 0.43 ENST00000366928.5
LYPLAL1
lysophospholipase-like 1
chr7_-_64023441 0.42 ENST00000309683.6
ZNF680
zinc finger protein 680
chr17_-_74639730 0.42 ENST00000589992.1
ST6GALNAC1
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
chr3_-_123339343 0.41 ENST00000578202.1
MYLK
myosin light chain kinase
chr21_+_25801041 0.39 ENST00000453784.2
ENST00000423581.1
AP000476.1
AP000476.1
chr3_-_123339418 0.36 ENST00000583087.1
MYLK
myosin light chain kinase
chr12_-_123728548 0.35 ENST00000545406.1
MPHOSPH9
M-phase phosphoprotein 9
chr6_+_134274354 0.35 ENST00000367869.1
TBPL1
TBP-like 1
chr4_+_141178440 0.35 ENST00000394205.3
SCOC
short coiled-coil protein
chr9_+_123884038 0.34 ENST00000373847.1
CNTRL
centriolin
chr6_+_127898312 0.33 ENST00000329722.7
C6orf58
chromosome 6 open reading frame 58
chr4_+_95679072 0.32 ENST00000515059.1
BMPR1B
bone morphogenetic protein receptor, type IB
chr7_-_27169801 0.32 ENST00000511914.1
HOXA4
homeobox A4
chr6_+_151358048 0.31 ENST00000450635.1
MTHFD1L
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
chr19_+_16999654 0.30 ENST00000248076.3
F2RL3
coagulation factor II (thrombin) receptor-like 3
chr10_-_79398250 0.30 ENST00000286627.5
KCNMA1
potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr16_-_66907139 0.29 ENST00000561579.2
NAE1
NEDD8 activating enzyme E1 subunit 1
chr13_+_34392200 0.29 ENST00000434425.1
RFC3
replication factor C (activator 1) 3, 38kDa
chr5_-_39270725 0.29 ENST00000512138.1
ENST00000512982.1
ENST00000540520.1
FYB
FYN binding protein
chr1_-_150208412 0.28 ENST00000532744.1
ENST00000369114.5
ENST00000369115.2
ENST00000369116.4
ANP32E
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr3_-_172241250 0.28 ENST00000420541.2
ENST00000241261.2
TNFSF10
tumor necrosis factor (ligand) superfamily, member 10
chr4_+_8321882 0.28 ENST00000509453.1
ENST00000503186.1
RP11-774O3.2
RP11-774O3.1
RP11-774O3.2
RP11-774O3.1
chr13_-_51101468 0.27 ENST00000428276.1
RP11-175B12.2
RP11-175B12.2
chr4_+_175204818 0.27 ENST00000503780.1
CEP44
centrosomal protein 44kDa
chr17_-_39526052 0.26 ENST00000251646.3
KRT33B
keratin 33B
chr4_-_142253761 0.26 ENST00000511213.1
RP11-362F19.1
RP11-362F19.1
chr6_+_88182643 0.25 ENST00000369556.3
ENST00000544441.1
ENST00000369552.4
ENST00000369557.5
SLC35A1
solute carrier family 35 (CMP-sialic acid transporter), member A1
chr19_+_21264943 0.25 ENST00000597424.1
ZNF714
zinc finger protein 714
chr1_-_149832704 0.25 ENST00000392933.1
ENST00000369157.2
ENST00000392932.4
HIST2H4B
histone cluster 2, H4b
chr1_+_246887349 0.25 ENST00000366510.3
SCCPDH
saccharopine dehydrogenase (putative)
chr2_+_161993465 0.25 ENST00000457476.1
TANK
TRAF family member-associated NFKB activator
chr19_+_21106081 0.25 ENST00000300540.3
ENST00000595854.1
ENST00000601284.1
ENST00000328178.8
ENST00000599885.1
ENST00000596476.1
ENST00000345030.6
ZNF85
zinc finger protein 85
chr4_+_106631966 0.25 ENST00000360505.5
ENST00000510865.1
ENST00000509336.1
GSTCD
glutathione S-transferase, C-terminal domain containing
chr3_-_195310802 0.25 ENST00000421243.1
ENST00000453131.1
APOD
apolipoprotein D
chr1_+_149804218 0.24 ENST00000610125.1
HIST2H4A
histone cluster 2, H4a
chr1_-_168464875 0.24 ENST00000422253.1
RP5-968D22.3
RP5-968D22.3
chr7_-_152373216 0.23 ENST00000359321.1
XRCC2
X-ray repair complementing defective repair in Chinese hamster cells 2
chr12_-_118796971 0.23 ENST00000542902.1
TAOK3
TAO kinase 3
chr10_-_113943447 0.23 ENST00000369425.1
ENST00000348367.4
ENST00000423155.1
GPAM
glycerol-3-phosphate acyltransferase, mitochondrial
chr12_-_118796910 0.23 ENST00000541186.1
ENST00000539872.1
TAOK3
TAO kinase 3
chr19_+_21264980 0.23 ENST00000596053.1
ENST00000597086.1
ENST00000596143.1
ENST00000596367.1
ENST00000601416.1
ZNF714
zinc finger protein 714
chr9_-_69229650 0.22 ENST00000416428.1
CBWD6
COBW domain containing 6
chr3_-_112320749 0.22 ENST00000610103.1
RP11-572C15.6
RP11-572C15.6
chr11_+_101785727 0.22 ENST00000263468.8
KIAA1377
KIAA1377
chr6_-_75953484 0.22 ENST00000472311.2
ENST00000460985.1
ENST00000377978.3
ENST00000509698.1
ENST00000230459.4
ENST00000370089.2
COX7A2
cytochrome c oxidase subunit VIIa polypeptide 2 (liver)
chr15_+_92006567 0.21 ENST00000554333.1
RP11-661P17.1
RP11-661P17.1
chr5_+_42756903 0.21 ENST00000361970.5
ENST00000388827.4
CCDC152
coiled-coil domain containing 152
chr12_+_102514019 0.21 ENST00000537257.1
ENST00000358383.5
ENST00000392911.2
PARPBP
PARP1 binding protein
chr2_+_138722028 0.21 ENST00000280096.5
HNMT
histamine N-methyltransferase
chr9_+_40028620 0.21 ENST00000426179.1
AL353791.1
AL353791.1
chr21_+_37442239 0.20 ENST00000530908.1
ENST00000290349.6
ENST00000439427.2
ENST00000399191.3
CBR1
carbonyl reductase 1
chr1_-_150208291 0.20 ENST00000533654.1
ANP32E
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr8_-_17555164 0.20 ENST00000297488.6
MTUS1
microtubule associated tumor suppressor 1
chr1_+_153631130 0.20 ENST00000368685.5
SNAPIN
SNAP-associated protein
chr4_+_119199864 0.20 ENST00000602414.1
ENST00000602520.1
SNHG8
small nucleolar RNA host gene 8 (non-protein coding)
chr6_-_32784687 0.20 ENST00000447394.1
ENST00000438763.2
HLA-DOB
major histocompatibility complex, class II, DO beta
chr19_+_45409011 0.19 ENST00000252486.4
ENST00000446996.1
ENST00000434152.1
APOE
apolipoprotein E
chr5_+_5140436 0.19 ENST00000511368.1
ENST00000274181.7
ADAMTS16
ADAM metallopeptidase with thrombospondin type 1 motif, 16
chr15_+_71184931 0.19 ENST00000560369.1
ENST00000260382.5
LRRC49
leucine rich repeat containing 49
chr19_-_23869999 0.18 ENST00000601935.1
ENST00000359788.4
ENST00000600313.1
ENST00000596211.1
ENST00000599168.1
ZNF675
zinc finger protein 675
chr3_+_174158732 0.18 ENST00000434257.1
NAALADL2
N-acetylated alpha-linked acidic dipeptidase-like 2
chrX_+_119737806 0.18 ENST00000371317.5
MCTS1
malignant T cell amplified sequence 1
chr7_+_23719749 0.18 ENST00000409192.3
ENST00000344962.4
ENST00000409653.1
ENST00000409994.3
FAM221A
family with sequence similarity 221, member A
chr10_-_13544945 0.18 ENST00000378605.3
ENST00000341083.3
BEND7
BEN domain containing 7
chr2_+_210444298 0.18 ENST00000445941.1
MAP2
microtubule-associated protein 2
chr8_+_1993173 0.18 ENST00000523438.1
MYOM2
myomesin 2
chr10_-_79397740 0.18 ENST00000372440.1
ENST00000480683.1
KCNMA1
potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr12_-_4647606 0.18 ENST00000261250.3
ENST00000541014.1
ENST00000545746.1
ENST00000542080.1
C12orf4
chromosome 12 open reading frame 4
chr1_-_47407136 0.18 ENST00000462347.1
ENST00000371905.1
ENST00000310638.4
CYP4A11
cytochrome P450, family 4, subfamily A, polypeptide 11
chr2_+_201390843 0.18 ENST00000357799.4
ENST00000409203.3
SGOL2
shugoshin-like 2 (S. pombe)
chr13_+_34392185 0.18 ENST00000380071.3
RFC3
replication factor C (activator 1) 3, 38kDa
chr1_-_150208498 0.17 ENST00000314136.8
ANP32E
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr17_+_56769924 0.17 ENST00000461271.1
ENST00000583539.1
ENST00000337432.4
ENST00000421782.2
RAD51C
RAD51 paralog C
chr10_+_94352956 0.17 ENST00000260731.3
KIF11
kinesin family member 11
chr13_+_103451399 0.17 ENST00000257336.1
ENST00000448849.2
BIVM
basic, immunoglobulin-like variable motif containing
chr4_-_148605265 0.16 ENST00000541232.1
ENST00000322396.6
PRMT10
protein arginine methyltransferase 10 (putative)
chr7_+_134551583 0.16 ENST00000435928.1
CALD1
caldesmon 1
chr3_+_99986036 0.16 ENST00000471098.1
TBC1D23
TBC1 domain family, member 23
chr20_-_52687059 0.16 ENST00000371435.2
ENST00000395961.3
BCAS1
breast carcinoma amplified sequence 1
chr5_-_64920115 0.15 ENST00000381018.3
ENST00000274327.7
TRIM23
tripartite motif containing 23
chrX_-_135338503 0.15 ENST00000370663.5
MAP7D3
MAP7 domain containing 3
chr1_-_150208363 0.15 ENST00000436748.2
ANP32E
acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
chr15_+_69373210 0.15 ENST00000435479.1
ENST00000559870.1
LINC00277
RP11-809H16.5
long intergenic non-protein coding RNA 277
RP11-809H16.5
chr3_-_160117035 0.15 ENST00000489004.1
ENST00000496589.1
IFT80
intraflagellar transport 80 homolog (Chlamydomonas)
chr11_-_124670550 0.15 ENST00000239614.4
MSANTD2
Myb/SANT-like DNA-binding domain containing 2
chrX_-_38186775 0.15 ENST00000339363.3
ENST00000309513.3
ENST00000338898.3
ENST00000342811.3
ENST00000378505.2
RPGR
retinitis pigmentosa GTPase regulator
chr1_+_222886694 0.15 ENST00000426638.1
ENST00000537020.1
ENST00000539697.1
BROX
BRO1 domain and CAAX motif containing
chr14_-_50319482 0.15 ENST00000546046.1
ENST00000555970.1
ENST00000554626.1
ENST00000545773.1
ENST00000556672.1
NEMF
nuclear export mediator factor
chr16_+_28565230 0.15 ENST00000317058.3
CCDC101
coiled-coil domain containing 101
chr2_+_172778952 0.15 ENST00000392584.1
ENST00000264108.4
HAT1
histone acetyltransferase 1
chr14_-_68000442 0.14 ENST00000554278.1
TMEM229B
transmembrane protein 229B
chr16_+_86612112 0.14 ENST00000320241.3
FOXL1
forkhead box L1
chr2_+_162016827 0.14 ENST00000429217.1
ENST00000406287.1
ENST00000402568.1
TANK
TRAF family member-associated NFKB activator
chr15_+_77713222 0.14 ENST00000558176.1
HMG20A
high mobility group 20A
chr6_-_11807277 0.14 ENST00000379415.2
ADTRP
androgen-dependent TFPI-regulating protein
chr4_+_119200215 0.14 ENST00000602573.1
SNHG8
small nucleolar RNA host gene 8 (non-protein coding)
chr3_+_122513642 0.14 ENST00000261038.5
DIRC2
disrupted in renal carcinoma 2
chr16_+_53483983 0.14 ENST00000544545.1
RBL2
retinoblastoma-like 2 (p130)
chr2_+_172309634 0.13 ENST00000339506.3
DCAF17
DDB1 and CUL4 associated factor 17
chr18_-_74839891 0.13 ENST00000581878.1
MBP
myelin basic protein
chr12_-_15815626 0.13 ENST00000540613.1
EPS8
epidermal growth factor receptor pathway substrate 8
chr17_+_17685422 0.13 ENST00000395774.1
RAI1
retinoic acid induced 1
chr22_-_39928823 0.13 ENST00000334678.3
RPS19BP1
ribosomal protein S19 binding protein 1
chr20_-_44420507 0.13 ENST00000243938.4
WFDC3
WAP four-disulfide core domain 3
chr1_+_174844645 0.13 ENST00000486220.1
RABGAP1L
RAB GTPase activating protein 1-like
chr2_+_61372226 0.13 ENST00000426997.1
C2orf74
chromosome 2 open reading frame 74
chr15_-_76304731 0.12 ENST00000394907.3
NRG4
neuregulin 4
chr17_-_39637392 0.12 ENST00000246639.2
ENST00000393989.1
KRT35
keratin 35
chr19_+_21265028 0.12 ENST00000291770.7
ZNF714
zinc finger protein 714
chr1_+_100435986 0.12 ENST00000532693.1
SLC35A3
solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
chr3_+_147657764 0.12 ENST00000467198.1
ENST00000485006.1
RP11-71N10.1
RP11-71N10.1
chr4_-_128887069 0.12 ENST00000541133.1
ENST00000296468.3
ENST00000513559.1
MFSD8
major facilitator superfamily domain containing 8
chr8_+_1993152 0.12 ENST00000262113.4
MYOM2
myomesin 2
chr2_-_207078154 0.12 ENST00000447845.1
GPR1
G protein-coupled receptor 1
chr5_+_110409012 0.12 ENST00000379706.4
TSLP
thymic stromal lymphopoietin
chr15_+_71185148 0.12 ENST00000443425.2
ENST00000560755.1
LRRC49
leucine rich repeat containing 49
chr1_+_78511586 0.12 ENST00000370759.3
GIPC2
GIPC PDZ domain containing family, member 2
chr14_-_50319758 0.11 ENST00000298310.5
NEMF
nuclear export mediator factor
chr11_+_85566422 0.11 ENST00000342404.3
CCDC83
coiled-coil domain containing 83
chr5_-_19142450 0.11 ENST00000504827.1
RP11-124N3.3
RP11-124N3.3
chr6_+_134274322 0.11 ENST00000367871.1
ENST00000237264.4
TBPL1
TBP-like 1
chr3_-_125775629 0.11 ENST00000383598.2
SLC41A3
solute carrier family 41, member 3
chr3_+_101498269 0.11 ENST00000491511.2
NXPE3
neurexophilin and PC-esterase domain family, member 3
chr12_+_67663056 0.11 ENST00000545606.1
CAND1
cullin-associated and neddylation-dissociated 1
chr7_-_29152509 0.11 ENST00000448959.1
CPVL
carboxypeptidase, vitellogenic-like
chr2_+_210443993 0.10 ENST00000392193.1
MAP2
microtubule-associated protein 2
chr1_+_84630645 0.10 ENST00000394839.2
PRKACB
protein kinase, cAMP-dependent, catalytic, beta
chr10_-_31288398 0.10 ENST00000538351.2
ZNF438
zinc finger protein 438
chr20_+_19870167 0.10 ENST00000440354.2
RIN2
Ras and Rab interactor 2
chr12_-_57630873 0.10 ENST00000556732.1
NDUFA4L2
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
chr10_-_79398127 0.10 ENST00000372443.1
KCNMA1
potassium large conductance calcium-activated channel, subfamily M, alpha member 1
chr11_+_63449045 0.10 ENST00000354497.4
RTN3
reticulon 3
chr12_-_78934441 0.10 ENST00000546865.1
ENST00000547089.1
RP11-171L9.1
RP11-171L9.1
chr17_+_68047418 0.10 ENST00000586373.1
ENST00000588782.1
LINC01028
long intergenic non-protein coding RNA 1028
chr22_+_38142235 0.10 ENST00000407319.2
ENST00000403663.2
ENST00000428075.1
TRIOBP
TRIO and F-actin binding protein
chr22_-_18111499 0.09 ENST00000413576.1
ENST00000399796.2
ENST00000399798.2
ENST00000253413.5
ATP6V1E1
ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
chrX_+_13707235 0.09 ENST00000464506.1
RAB9A
RAB9A, member RAS oncogene family
chr4_+_170581213 0.09 ENST00000507875.1
CLCN3
chloride channel, voltage-sensitive 3
chr4_+_128702969 0.09 ENST00000508776.1
ENST00000439123.2
HSPA4L
heat shock 70kDa protein 4-like
chr5_+_169010638 0.09 ENST00000265295.4
ENST00000506574.1
ENST00000515224.1
ENST00000508247.1
ENST00000513941.1
SPDL1
spindle apparatus coiled-coil protein 1
chr12_-_64062583 0.09 ENST00000542209.1
DPY19L2
dpy-19-like 2 (C. elegans)
chr17_-_15496722 0.09 ENST00000472534.1
CDRT1
CMT1A duplicated region transcript 1
chr5_+_138678131 0.09 ENST00000394795.2
ENST00000510080.1
PAIP2
poly(A) binding protein interacting protein 2
chr7_-_16872932 0.09 ENST00000419572.2
ENST00000412973.1
AGR2
anterior gradient 2
chr4_+_70861647 0.08 ENST00000246895.4
ENST00000381060.2
STATH
statherin
chr8_+_77318769 0.08 ENST00000518732.1
RP11-706J10.1
long intergenic non-protein coding RNA 1111
chr16_-_11367452 0.08 ENST00000327157.2
PRM3
protamine 3
chr9_+_86238016 0.08 ENST00000530832.1
ENST00000405990.3
ENST00000376417.4
ENST00000376419.4
IDNK
idnK, gluconokinase homolog (E. coli)
chr14_-_92333873 0.08 ENST00000435962.2
TC2N
tandem C2 domains, nuclear
chr5_+_101569696 0.08 ENST00000597120.1
AC008948.1
AC008948.1
chr17_-_2415169 0.08 ENST00000263092.6
ENST00000538844.1
ENST00000576976.1
METTL16
methyltransferase like 16
chr4_-_170533723 0.08 ENST00000510533.1
ENST00000439128.2
ENST00000511633.1
ENST00000512193.1
ENST00000507142.1
NEK1
NIMA-related kinase 1
chr4_-_155533787 0.08 ENST00000407946.1
ENST00000405164.1
ENST00000336098.3
ENST00000393846.2
ENST00000404648.3
ENST00000443553.1
FGG
fibrinogen gamma chain
chr18_-_73967160 0.08 ENST00000579714.1
RP11-94B19.7
RP11-94B19.7
chr6_+_10585979 0.08 ENST00000265012.4
GCNT2
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
chr7_-_30066233 0.08 ENST00000222803.5
FKBP14
FK506 binding protein 14, 22 kDa
chr9_-_88715044 0.08 ENST00000388711.3
ENST00000466178.1
GOLM1
golgi membrane protein 1
chr2_+_162016916 0.07 ENST00000405852.1
TANK
TRAF family member-associated NFKB activator
chr3_+_111630451 0.07 ENST00000495180.1
PHLDB2
pleckstrin homology-like domain, family B, member 2
chr6_-_36515177 0.07 ENST00000229812.7
STK38
serine/threonine kinase 38
chr5_+_134181625 0.07 ENST00000394976.3
C5orf24
chromosome 5 open reading frame 24
chr6_+_106988986 0.07 ENST00000457437.1
ENST00000535438.1
AIM1
absent in melanoma 1
chr7_+_80275621 0.07 ENST00000426978.1
ENST00000432207.1
CD36
CD36 molecule (thrombospondin receptor)
chr2_+_210444142 0.07 ENST00000360351.4
ENST00000361559.4
MAP2
microtubule-associated protein 2
chr5_-_146781153 0.07 ENST00000520473.1
DPYSL3
dihydropyrimidinase-like 3
chr14_-_24911868 0.07 ENST00000554698.1
SDR39U1
short chain dehydrogenase/reductase family 39U, member 1
chr1_+_213224572 0.06 ENST00000543470.1
ENST00000366960.3
ENST00000366959.3
ENST00000543354.1
RPS6KC1
ribosomal protein S6 kinase, 52kDa, polypeptide 1
chr17_-_3496171 0.06 ENST00000399756.4
TRPV1
transient receptor potential cation channel, subfamily V, member 1
chr3_-_126373929 0.06 ENST00000523403.1
ENST00000524230.2
TXNRD3
thioredoxin reductase 3
chr19_-_20748614 0.06 ENST00000596797.1
ZNF737
zinc finger protein 737
chr2_-_86850949 0.06 ENST00000237455.4
RNF103
ring finger protein 103
chr6_-_146057144 0.06 ENST00000367519.3
EPM2A
epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)
chr9_-_88714421 0.06 ENST00000388712.3
GOLM1
golgi membrane protein 1
chr13_+_28813645 0.06 ENST00000282391.5
PAN3
PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
chr9_-_26892765 0.06 ENST00000520187.1
ENST00000333916.5
CAAP1
caspase activity and apoptosis inhibitor 1
chr16_+_16481598 0.06 ENST00000327792.5
NPIPA7
nuclear pore complex interacting protein family, member A7
chr19_-_57656570 0.06 ENST00000269834.1
ZIM3
zinc finger, imprinted 3
chr19_+_859654 0.06 ENST00000592860.1
CFD
complement factor D (adipsin)
chr1_-_155880672 0.06 ENST00000609492.1
ENST00000368322.3
RIT1
Ras-like without CAAX 1
chr17_-_42092313 0.06 ENST00000587529.1
ENST00000206380.3
ENST00000542039.1
TMEM101
transmembrane protein 101
chr15_-_99057551 0.06 ENST00000558256.1
FAM169B
family with sequence similarity 169, member B
chr6_-_150217195 0.05 ENST00000532335.1
RAET1E
retinoic acid early transcript 1E
chr10_-_70287231 0.05 ENST00000609923.1
SLC25A16
solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
chr4_-_175204765 0.05 ENST00000513696.1
ENST00000503293.1
FBXO8
F-box protein 8
chrX_+_78003204 0.05 ENST00000435339.3
ENST00000514744.1
LPAR4
lysophosphatidic acid receptor 4
chr22_-_38240316 0.05 ENST00000411961.2
ENST00000434930.1
ANKRD54
ankyrin repeat domain 54
chr2_+_48796120 0.05 ENST00000394754.1
STON1-GTF2A1L
STON1-GTF2A1L readthrough
chr2_+_48010312 0.05 ENST00000540021.1
MSH6
mutS homolog 6
chr6_+_56820152 0.05 ENST00000370745.1
BEND6
BEN domain containing 6
chr12_+_70219052 0.05 ENST00000552032.2
ENST00000547771.2
MYRFL
myelin regulatory factor-like
chr2_+_241499719 0.05 ENST00000405954.1
DUSP28
dual specificity phosphatase 28
chr17_-_74639886 0.05 ENST00000156626.7
ST6GALNAC1
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
chr12_-_13248598 0.05 ENST00000337630.6
ENST00000545699.1
GSG1
germ cell associated 1

Network of associatons between targets according to the STRING database.

First level regulatory network of HOXC13

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0070537 histone H2A K63-linked deubiquitination(GO:0070537)
0.1 0.8 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.1 0.9 GO:0002084 protein depalmitoylation(GO:0002084)
0.1 0.6 GO:2000158 positive regulation of ubiquitin-specific protease activity(GO:2000158)
0.1 0.2 GO:1902824 positive regulation of late endosome to lysosome transport(GO:1902824)
0.1 0.2 GO:0002581 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581)
0.1 0.2 GO:2000646 lipid transport involved in lipid storage(GO:0010877) regulation of Cdc42 protein signal transduction(GO:0032489) positive regulation of receptor catabolic process(GO:2000646)
0.1 0.3 GO:0009257 10-formyltetrahydrofolate biosynthetic process(GO:0009257)
0.1 0.2 GO:2000097 negative regulation of lipoprotein oxidation(GO:0034443) regulation of smooth muscle cell-matrix adhesion(GO:2000097)
0.1 0.2 GO:0002188 translation reinitiation(GO:0002188)
0.1 0.2 GO:0003095 pressure natriuresis(GO:0003095)
0.1 0.5 GO:1900264 regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264)
0.1 0.5 GO:0006235 dTTP biosynthetic process(GO:0006235) pyrimidine deoxyribonucleoside triphosphate biosynthetic process(GO:0009212)
0.0 0.6 GO:0060083 smooth muscle contraction involved in micturition(GO:0060083)
0.0 0.3 GO:0048165 ovarian cumulus expansion(GO:0001550) fused antrum stage(GO:0048165)
0.0 0.4 GO:0000707 meiotic DNA recombinase assembly(GO:0000707)
0.0 0.3 GO:0002074 extraocular skeletal muscle development(GO:0002074)
0.0 0.2 GO:0055091 phospholipid homeostasis(GO:0055091)
0.0 0.4 GO:0015781 pyrimidine nucleotide-sugar transport(GO:0015781)
0.0 0.5 GO:0001574 ganglioside biosynthetic process(GO:0001574)
0.0 0.3 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.1 GO:1904209 regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904207) positive regulation of chemokine (C-C motif) ligand 2 secretion(GO:1904209)
0.0 0.1 GO:0019520 aldonic acid metabolic process(GO:0019520) D-gluconate metabolic process(GO:0019521)
0.0 0.1 GO:0061146 Peyer's patch morphogenesis(GO:0061146)
0.0 0.2 GO:2000660 negative regulation of interleukin-1-mediated signaling pathway(GO:2000660)
0.0 0.3 GO:0060155 platelet dense granule organization(GO:0060155)
0.0 0.3 GO:0061635 regulation of protein complex stability(GO:0061635)
0.0 0.2 GO:0042373 vitamin K metabolic process(GO:0042373)
0.0 0.1 GO:0070358 actin polymerization-dependent cell motility(GO:0070358)
0.0 0.7 GO:0015721 bile acid and bile salt transport(GO:0015721)
0.0 0.1 GO:0030047 actin modification(GO:0030047)
0.0 0.1 GO:0048388 endosomal lumen acidification(GO:0048388)
0.0 0.2 GO:2000042 negative regulation of double-strand break repair via homologous recombination(GO:2000042)
0.0 0.1 GO:0006335 DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723)
0.0 0.5 GO:0007095 mitotic G2 DNA damage checkpoint(GO:0007095)
0.0 0.1 GO:0060480 lung goblet cell differentiation(GO:0060480) lobar bronchus epithelium development(GO:0060481)
0.0 0.8 GO:0043486 histone exchange(GO:0043486)
0.0 0.0 GO:0061534 gamma-aminobutyric acid secretion, neurotransmission(GO:0061534)
0.0 0.1 GO:0097338 response to clozapine(GO:0097338)
0.0 0.1 GO:0010265 SCF complex assembly(GO:0010265)
0.0 0.3 GO:0097296 activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway(GO:0097296)
0.0 0.1 GO:0052205 modulation of molecular function in other organism(GO:0044359) negative regulation of molecular function in other organism(GO:0044362) negative regulation of molecular function in other organism involved in symbiotic interaction(GO:0052204) modulation of molecular function in other organism involved in symbiotic interaction(GO:0052205) negative regulation by host of symbiont molecular function(GO:0052405) modification by host of symbiont molecular function(GO:0052428)
0.0 0.0 GO:0006433 glutamyl-tRNA aminoacylation(GO:0006424) prolyl-tRNA aminoacylation(GO:0006433)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:0034365 discoidal high-density lipoprotein particle(GO:0034365)
0.1 0.7 GO:0070531 BRCA1-A complex(GO:0070531)
0.1 0.5 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.4 GO:0097442 CA3 pyramidal cell dendrite(GO:0097442)
0.0 0.4 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.8 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.5 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.3 GO:1990712 HFE-transferrin receptor complex(GO:1990712)
0.0 0.1 GO:0031251 PAN complex(GO:0031251)
0.0 0.0 GO:0044609 DBIRD complex(GO:0044609)
0.0 0.3 GO:0032982 myosin filament(GO:0032982)
0.0 0.2 GO:0030478 actin cap(GO:0030478)
0.0 0.1 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.1 GO:0033269 internode region of axon(GO:0033269)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 GO:0008508 bile acid:sodium symporter activity(GO:0008508)
0.1 0.3 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.2 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.1 0.6 GO:0035800 deubiquitinase activator activity(GO:0035800)
0.1 0.7 GO:0004687 myosin light chain kinase activity(GO:0004687)
0.1 0.6 GO:0060072 large conductance calcium-activated potassium channel activity(GO:0060072)
0.1 0.9 GO:0008474 palmitoyl-(protein) hydrolase activity(GO:0008474) palmitoyl hydrolase activity(GO:0098599)
0.1 0.3 GO:0004329 formate-tetrahydrofolate ligase activity(GO:0004329)
0.1 0.2 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.2 GO:0070326 very-low-density lipoprotein particle receptor binding(GO:0070326)
0.0 0.5 GO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665)
0.0 0.5 GO:0033170 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.3 GO:0015057 thrombin receptor activity(GO:0015057)
0.0 0.2 GO:0004090 carbonyl reductase (NADPH) activity(GO:0004090)
0.0 0.4 GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity(GO:0015165)
0.0 0.3 GO:0005025 transforming growth factor beta receptor activity, type I(GO:0005025)
0.0 0.1 GO:0016422 mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity(GO:0016422)
0.0 0.4 GO:0000150 recombinase activity(GO:0000150)
0.0 0.7 GO:0070530 K63-linked polyubiquitin binding(GO:0070530)
0.0 0.1 GO:0030197 extracellular matrix constituent, lubricant activity(GO:0030197)
0.0 0.1 GO:0072320 volume-sensitive chloride channel activity(GO:0072320)
0.0 0.1 GO:0043515 kinetochore binding(GO:0043515)
0.0 0.4 GO:0002162 dystroglycan binding(GO:0002162)
0.0 0.1 GO:0097603 temperature-gated ion channel activity(GO:0097603)
0.0 0.3 GO:0097493 structural molecule activity conferring elasticity(GO:0097493)
0.0 0.2 GO:0032395 MHC class II receptor activity(GO:0032395)
0.0 0.3 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.8 GO:0019212 phosphatase inhibitor activity(GO:0019212)
0.0 0.1 GO:0032143 single thymine insertion binding(GO:0032143)
0.0 0.0 GO:0004827 glutamate-tRNA ligase activity(GO:0004818) proline-tRNA ligase activity(GO:0004827)

Gene overrepresentation in C2:CP category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.0 0.8 SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES Genes related to regulation of the actin cytoskeleton

Gene overrepresentation in C2:CP:REACTOME category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.5 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.5 REACTOME TRAF6 MEDIATED IRF7 ACTIVATION Genes involved in TRAF6 mediated IRF7 activation
0.0 0.9 REACTOME SMOOTH MUSCLE CONTRACTION Genes involved in Smooth Muscle Contraction
0.0 0.2 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport