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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for HOXA5
Z-value: 0.44
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Transcription factors associated with HOXA5
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| HOXA5 | hg19_v2_chr7_-_27183263_27183287 | -0.19 | 7.1e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr8_-_123139423 Show fit | 0.39 |
ENST00000523792.1
|
RP11-398G24.2 |
|
| chr3_-_143567262 Show fit | 0.28 |
ENST00000474151.1
ENST00000316549.6 |
solute carrier family 9, subfamily A (NHE9, cation proton antiporter 9), member 9 |
|
| chr10_-_21186144 Show fit | 0.21 |
ENST00000377119.1
|
nebulette |
|
| chr6_-_152623231 Show fit | 0.19 |
ENST00000540663.1
ENST00000537033.1 |
spectrin repeat containing, nuclear envelope 1 |
|
| chr2_+_114163945 Show fit | 0.17 |
ENST00000453673.3
|
immunoglobulin kappa variable 1/OR2-108 (non-functional) |
|
| chr12_+_25205446 Show fit | 0.15 |
ENST00000557489.1
ENST00000354454.3 ENST00000536173.1 |
lymphoid-restricted membrane protein |
|
| chr17_-_33446735 Show fit | 0.14 |
ENST00000460118.2
ENST00000335858.7 |
RAD51 paralog D |
|
| chr2_+_227771404 Show fit | 0.14 |
ENST00000409053.1
|
rhomboid domain containing 1 |
|
| chr7_-_99716914 Show fit | 0.13 |
ENST00000431404.2
|
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa |
|
| chr2_+_190541153 Show fit | 0.12 |
ENST00000313581.4
ENST00000438402.2 ENST00000431575.2 ENST00000281412.6 |
ankyrin and armadillo repeat containing |
Network of associatons between targets according to the STRING database.
First level regulatory network of HOXA5
Gene Ontology Analysis
Gene overrepresentation in biological_process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:1990118 | sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118) |
| 0.0 | 0.2 | GO:0000707 | meiotic DNA recombinase assembly(GO:0000707) |
| 0.0 | 0.2 | GO:0090292 | nuclear matrix anchoring at nuclear membrane(GO:0090292) |
| 0.0 | 0.1 | GO:1904211 | membrane protein proteolysis involved in retrograde protein transport, ER to cytosol(GO:1904211) |
| 0.0 | 0.1 | GO:0071418 | cellular response to amine stimulus(GO:0071418) |
| 0.0 | 0.1 | GO:2001027 | negative regulation of endothelial cell chemotaxis(GO:2001027) |
| 0.0 | 0.1 | GO:0002416 | IgG immunoglobulin transcytosis in epithelial cells mediated by FcRn immunoglobulin receptor(GO:0002416) |
| 0.0 | 0.1 | GO:0042357 | thiamine diphosphate metabolic process(GO:0042357) |
| 0.0 | 0.1 | GO:0036071 | N-glycan fucosylation(GO:0036071) |
| 0.0 | 0.1 | GO:0021779 | oligodendrocyte cell fate specification(GO:0021778) oligodendrocyte cell fate commitment(GO:0021779) glial cell fate specification(GO:0021780) |
Gene overrepresentation in cellular_component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0033063 | Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) |
| 0.0 | 0.1 | GO:0034657 | GID complex(GO:0034657) |
| 0.0 | 0.0 | GO:1990075 | kinesin II complex(GO:0016939) periciliary membrane compartment(GO:1990075) |
Gene overrepresentation in molecular_function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | GO:0015386 | potassium:proton antiporter activity(GO:0015386) |
| 0.0 | 0.2 | GO:0042923 | neuropeptide binding(GO:0042923) |
| 0.0 | 0.2 | GO:0000150 | recombinase activity(GO:0000150) |
| 0.0 | 0.2 | GO:0017162 | aryl hydrocarbon receptor binding(GO:0017162) |
| 0.0 | 0.1 | GO:0050333 | thiamin-triphosphatase activity(GO:0050333) |
| 0.0 | 0.1 | GO:0004852 | uroporphyrinogen-III synthase activity(GO:0004852) |
| 0.0 | 0.1 | GO:0046921 | glycoprotein 6-alpha-L-fucosyltransferase activity(GO:0008424) alpha-(1->6)-fucosyltransferase activity(GO:0046921) |
| 0.0 | 0.1 | GO:0015307 | drug:proton antiporter activity(GO:0015307) |
| 0.0 | 0.1 | GO:0019770 | IgG receptor activity(GO:0019770) |
| 0.0 | 0.0 | GO:0061598 | molybdopterin adenylyltransferase activity(GO:0061598) molybdopterin molybdotransferase activity(GO:0061599) |