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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
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Results for GAGAACU
Z-value: 0.05
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miRNA associated with seed GAGAACU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-146a-5p
|
MIMAT0000449 |
|
hsa-miR-146b-5p
|
MIMAT0002809 |
|
hsa-miR-7153-5p
|
MIMAT0028216 |
Activity profile of GAGAACU motif
Sorted Z-values of GAGAACU motif
Network of associatons between targets according to the STRING database.
First level regulatory network of GAGAACU
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr1_-_245134273 | 0.01 |
ENST00000607453.1 |
RP11-156E8.1 |
Uncharacterized protein |
| chr14_-_68141535 | 0.00 |
ENST00000554659.1 |
VTI1B |
vesicle transport through interaction with t-SNAREs 1B |
| chr6_+_116832789 | 0.00 |
ENST00000368599.3 |
FAM26E |
family with sequence similarity 26, member E |
| chr15_-_52821247 | 0.00 |
ENST00000399231.3 ENST00000399233.2 |
MYO5A |
myosin VA (heavy chain 12, myoxin) |
| chr22_+_29279552 | 0.00 |
ENST00000544604.2 |
ZNRF3 |
zinc and ring finger 3 |
| chr1_-_27816556 | 0.00 |
ENST00000536657.1 |
WASF2 |
WAS protein family, member 2 |
| chr2_-_208030647 | 0.00 |
ENST00000309446.6 |
KLF7 |
Kruppel-like factor 7 (ubiquitous) |
| chr3_+_11314099 | 0.00 |
ENST00000446450.2 ENST00000354956.5 ENST00000354449.3 ENST00000419112.1 |
ATG7 |
autophagy related 7 |
| chr10_+_120967072 | 0.00 |
ENST00000392870.2 |
GRK5 |
G protein-coupled receptor kinase 5 |
| chr6_+_160390102 | 0.00 |
ENST00000356956.1 |
IGF2R |
insulin-like growth factor 2 receptor |
| chr16_-_69364467 | 0.00 |
ENST00000288022.1 |
PDF |
peptide deformylase (mitochondrial) |
| chr13_+_27131887 | 0.00 |
ENST00000335327.5 |
WASF3 |
WAS protein family, member 3 |
| chr17_-_1613663 | 0.00 |
ENST00000330676.6 |
TLCD2 |
TLC domain containing 2 |
| chr9_-_33264676 | 0.00 |
ENST00000472232.3 ENST00000379704.2 |
BAG1 |
BCL2-associated athanogene |
| chr9_+_71320596 | 0.00 |
ENST00000265382.3 |
PIP5K1B |
phosphatidylinositol-4-phosphate 5-kinase, type I, beta |
| chr2_+_113239710 | 0.00 |
ENST00000233336.6 |
TTL |
tubulin tyrosine ligase |
| chr17_-_30669138 | 0.00 |
ENST00000225805.4 ENST00000577809.1 |
C17orf75 |
chromosome 17 open reading frame 75 |
| chr18_+_19749386 | 0.00 |
ENST00000269216.3 |
GATA6 |
GATA binding protein 6 |
| chr3_-_194090460 | 0.00 |
ENST00000428839.1 ENST00000347624.3 |
LRRC15 |
leucine rich repeat containing 15 |
| chr20_+_62795827 | 0.00 |
ENST00000328439.1 ENST00000536311.1 |
MYT1 |
myelin transcription factor 1 |
| chr1_+_32930647 | 0.00 |
ENST00000609129.1 |
ZBTB8B |
zinc finger and BTB domain containing 8B |
| chrX_-_41782249 | 0.00 |
ENST00000442742.2 ENST00000421587.2 ENST00000378166.4 ENST00000318588.9 ENST00000361962.4 |
CASK |
calcium/calmodulin-dependent serine protein kinase (MAGUK family) |
| chr1_+_167599330 | 0.00 |
ENST00000367854.3 ENST00000361496.3 |
RCSD1 |
RCSD domain containing 1 |
| chr16_-_46782221 | 0.00 |
ENST00000394809.4 |
MYLK3 |
myosin light chain kinase 3 |
| chr8_+_104831472 | 0.00 |
ENST00000262231.10 ENST00000507740.1 |
RIMS2 |
regulating synaptic membrane exocytosis 2 |
| chr3_-_79068594 | 0.00 |
ENST00000436010.2 |
ROBO1 |
roundabout, axon guidance receptor, homolog 1 (Drosophila) |
| chr6_-_90121938 | 0.00 |
ENST00000369415.4 |
RRAGD |
Ras-related GTP binding D |
| chr2_-_37193606 | 0.00 |
ENST00000379213.2 ENST00000263918.4 |
STRN |
striatin, calmodulin binding protein |
| chr17_-_41174424 | 0.00 |
ENST00000355653.3 |
VAT1 |
vesicle amine transport 1 |
| chr1_+_26737253 | 0.00 |
ENST00000326279.6 |
LIN28A |
lin-28 homolog A (C. elegans) |
| chr5_+_10353780 | 0.00 |
ENST00000449913.2 ENST00000503788.1 ENST00000274140.5 |
MARCH6 |
membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase |
| chr16_-_69368774 | 0.00 |
ENST00000562949.1 |
RP11-343C2.12 |
Conserved oligomeric Golgi complex subunit 8 |
| chr6_+_76458909 | 0.00 |
ENST00000369981.3 ENST00000369985.4 |
MYO6 |
myosin VI |
| chr14_-_73493825 | 0.00 |
ENST00000318876.5 ENST00000556143.1 |
ZFYVE1 |
zinc finger, FYVE domain containing 1 |
| chr4_-_71705590 | 0.00 |
ENST00000254799.6 |
GRSF1 |
G-rich RNA sequence binding factor 1 |
| chr8_-_89339705 | 0.00 |
ENST00000286614.6 |
MMP16 |
matrix metallopeptidase 16 (membrane-inserted) |
| chr8_+_56014949 | 0.00 |
ENST00000327381.6 |
XKR4 |
XK, Kell blood group complex subunit-related family, member 4 |
| chr10_+_88516396 | 0.00 |
ENST00000372037.3 |
BMPR1A |
bone morphogenetic protein receptor, type IA |
| chr10_-_119134918 | 0.00 |
ENST00000334464.5 |
PDZD8 |
PDZ domain containing 8 |
| chr3_-_164913777 | 0.00 |
ENST00000475390.1 |
SLITRK3 |
SLIT and NTRK-like family, member 3 |
| chr8_+_35649365 | 0.00 |
ENST00000437887.1 |
AC012215.1 |
Uncharacterized protein |
| chr2_-_166930131 | 0.00 |
ENST00000303395.4 ENST00000409050.1 ENST00000423058.2 ENST00000375405.3 |
SCN1A |
sodium channel, voltage-gated, type I, alpha subunit |
| chr13_+_100153665 | 0.00 |
ENST00000376387.4 |
TM9SF2 |
transmembrane 9 superfamily member 2 |
| chr17_-_38020392 | 0.00 |
ENST00000346872.3 ENST00000439167.2 ENST00000377945.3 ENST00000394189.2 ENST00000377944.3 ENST00000377958.2 ENST00000535189.1 ENST00000377952.2 |
IKZF3 |
IKAROS family zinc finger 3 (Aiolos) |
| chr1_+_32573636 | 0.00 |
ENST00000373625.3 |
KPNA6 |
karyopherin alpha 6 (importin alpha 7) |
| chr11_-_36531774 | 0.00 |
ENST00000348124.5 ENST00000526995.1 |
TRAF6 |
TNF receptor-associated factor 6, E3 ubiquitin protein ligase |