NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSG00000158711.9 | ETS transcription factor ELK4 | |
ENSG00000244405.3 | ETS variant transcription factor 5 | |
ENSG00000126767.13 | ETS transcription factor ELK1 | |
ENSG00000111145.3 | ETS transcription factor ELK3 | |
ENSG00000102034.12 | E74 like ETS transcription factor 4 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ELK4 | hg19_v2_chr1_-_205601064_205601090 | 0.90 | 1.3e-02 | Click! |
ELK1 | hg19_v2_chrX_-_47509887_47509990 | 0.75 | 8.7e-02 | Click! |
ETV5 | hg19_v2_chr3_-_185826855_185826911 | 0.67 | 1.4e-01 | Click! |
ELK3 | hg19_v2_chr12_+_96588143_96588185 | -0.66 | 1.5e-01 | Click! |
ELF4 | hg19_v2_chrX_-_129244336_129244442 | 0.32 | 5.3e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 8.9 | GO:0051383 | kinetochore organization(GO:0051383) |
1.1 | 8.6 | GO:0044565 | dendritic cell proliferation(GO:0044565) |
0.2 | 7.5 | GO:0007080 | mitotic metaphase plate congression(GO:0007080) |
0.1 | 5.9 | GO:0030488 | tRNA methylation(GO:0030488) |
0.9 | 5.3 | GO:0031860 | telomeric 3' overhang formation(GO:0031860) |
0.2 | 5.3 | GO:0016254 | preassembly of GPI anchor in ER membrane(GO:0016254) |
1.2 | 4.9 | GO:0044029 | DNA hypomethylation(GO:0044028) hypomethylation of CpG island(GO:0044029) |
0.1 | 4.8 | GO:0070979 | protein K11-linked ubiquitination(GO:0070979) |
0.1 | 4.8 | GO:0035735 | intraciliary transport involved in cilium morphogenesis(GO:0035735) |
0.1 | 4.7 | GO:0006362 | transcription elongation from RNA polymerase I promoter(GO:0006362) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.5 | GO:0005813 | centrosome(GO:0005813) |
0.0 | 9.2 | GO:0000922 | spindle pole(GO:0000922) |
0.0 | 8.0 | GO:0005741 | mitochondrial outer membrane(GO:0005741) |
0.1 | 7.2 | GO:0000777 | condensed chromosome kinetochore(GO:0000777) |
0.1 | 6.6 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.0 | 6.5 | GO:0031901 | early endosome membrane(GO:0031901) |
0.1 | 6.1 | GO:0030140 | trans-Golgi network transport vesicle(GO:0030140) |
0.1 | 5.8 | GO:0034451 | centriolar satellite(GO:0034451) |
0.2 | 5.4 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.5 | 5.2 | GO:0005943 | phosphatidylinositol 3-kinase complex, class IA(GO:0005943) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 38.0 | GO:0001071 | nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700) |
0.0 | 12.5 | GO:0008270 | zinc ion binding(GO:0008270) |
0.3 | 8.6 | GO:0008409 | 5'-3' exonuclease activity(GO:0008409) |
0.1 | 7.6 | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) |
0.5 | 6.9 | GO:0051880 | G-quadruplex DNA binding(GO:0051880) |
0.1 | 6.4 | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538) |
0.0 | 6.1 | GO:0019905 | syntaxin binding(GO:0019905) |
0.0 | 6.0 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.1 | 5.9 | GO:0001103 | RNA polymerase II repressing transcription factor binding(GO:0001103) |
0.5 | 5.0 | GO:0035005 | 1-phosphatidylinositol-4-phosphate 3-kinase activity(GO:0035005) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 18.7 | PID FANCONI PATHWAY | Fanconi anemia pathway |
0.1 | 12.1 | PID AURORA B PATHWAY | Aurora B signaling |
0.1 | 5.9 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.2 | 4.5 | PID IL5 PATHWAY | IL5-mediated signaling events |
0.0 | 3.6 | SIG PIP3 SIGNALING IN B LYMPHOCYTES | Genes related to PIP3 signaling in B lymphocytes |
0.1 | 3.4 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 3.3 | PID CDC42 PATHWAY | CDC42 signaling events |
0.0 | 3.1 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 2.5 | PID BARD1 PATHWAY | BARD1 signaling events |
0.0 | 2.3 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 26.3 | REACTOME GENERIC TRANSCRIPTION PATHWAY | Genes involved in Generic Transcription Pathway |
0.1 | 16.8 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.3 | 9.8 | REACTOME HOMOLOGOUS RECOMBINATION REPAIR OF REPLICATION INDEPENDENT DOUBLE STRAND BREAKS | Genes involved in Homologous recombination repair of replication-independent double-strand breaks |
0.3 | 8.6 | REACTOME PROCESSING OF INTRONLESS PRE MRNAS | Genes involved in Processing of Intronless Pre-mRNAs |
0.2 | 7.9 | REACTOME REGULATION OF SIGNALING BY CBL | Genes involved in Regulation of signaling by CBL |
0.1 | 5.9 | REACTOME RNA POL I TRANSCRIPTION INITIATION | Genes involved in RNA Polymerase I Transcription Initiation |
0.2 | 5.8 | REACTOME INHIBITION OF THE PROTEOLYTIC ACTIVITY OF APC C REQUIRED FOR THE ONSET OF ANAPHASE BY MITOTIC SPINDLE CHECKPOINT COMPONENTS | Genes involved in Inhibition of the proteolytic activity of APC/C required for the onset of anaphase by mitotic spindle checkpoint components |
0.2 | 5.7 | REACTOME INSULIN SYNTHESIS AND PROCESSING | Genes involved in Insulin Synthesis and Processing |
0.2 | 5.2 | REACTOME SYNTHESIS OF GLYCOSYLPHOSPHATIDYLINOSITOL GPI | Genes involved in Synthesis of glycosylphosphatidylinositol (GPI) |
0.1 | 4.5 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |