ISMARA results: AGCUUAU

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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for AGCUUAU

Z-value: 0.21

Motif logo

miRNA associated with seed AGCUUAU

Name	miRBASE accession
hsa-miR-21-5p miRBase	MIMAT0000076
hsa-miR-590-5p miRBase	MIMAT0003258

Activity profile of AGCUUAU motif

Sorted Z-values of AGCUUAU motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr10_+_112631547 Show fit	0.08	ENST00000280154.7 ENST00000393104.2	PDCD4 Ensembl NCBI GeneCards UniProt NextProt Show fit	programmed cell death 4 (neoplastic transformation inhibitor)
chr22_+_33197683 Show fit	0.07	ENST00000266085.6	TIMP3 Ensembl NCBI GeneCards UniProt NextProt Show fit	TIMP metallopeptidase inhibitor 3
chr4_-_140098339 Show fit	0.07	ENST00000394235.2	ELF2 Ensembl NCBI GeneCards UniProt NextProt Show fit	E74-like factor 2 (ets domain transcription factor)
chr5_+_67511524 Show fit	0.07	ENST00000521381.1 ENST00000521657.1	PIK3R1 Ensembl NCBI GeneCards UniProt NextProt Show fit	phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr11_-_94964354 Show fit	0.07	ENST00000536441.1	SESN3 Ensembl NCBI GeneCards UniProt NextProt Show fit	sestrin 3
chr1_+_154377669 Show fit	0.06	ENST00000368485.3 ENST00000344086.4	IL6R Ensembl NCBI GeneCards UniProt NextProt Show fit	interleukin 6 receptor
chr20_+_56884752 Show fit	0.06	ENST00000244040.3	RAB22A Ensembl NCBI GeneCards UniProt NextProt Show fit	RAB22A, member RAS oncogene family
chr7_-_91875358 Show fit	0.06	ENST00000458177.1 ENST00000394507.1 ENST00000340022.2 ENST00000444960.1	KRIT1 Ensembl NCBI GeneCards UniProt NextProt Show fit	KRIT1, ankyrin repeat containing
chr7_+_102715315 Show fit	0.05	ENST00000428183.2 ENST00000323716.3 ENST00000441711.2 ENST00000454559.1 ENST00000425331.1 ENST00000541300.1	ARMC10 Ensembl NCBI GeneCards UniProt NextProt Show fit	armadillo repeat containing 10
chr6_-_82462425 Show fit	0.05	ENST00000369754.3 ENST00000320172.6 ENST00000369756.3	FAM46A Ensembl NCBI GeneCards UniProt NextProt Show fit	family with sequence similarity 46, member A

Showing 1 to 10 of 158 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCUUAU

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Total log-likelihood	Term	Description
0.1	GO:1904761	negative regulation of myofibroblast differentiation(GO:1904761)
0.1	GO:1903984	positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.1	GO:0002384	hepatic immune response(GO:0002384)
0.0	GO:0010961	cellular magnesium ion homeostasis(GO:0010961) calcium-dependent cell-matrix adhesion(GO:0016340)
0.0	GO:0048203	vesicle targeting, trans-Golgi to endosome(GO:0048203)

Showing 1 to 5 of 5 entries

Gene overrepresentation in cellular_component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0005896	interleukin-6 receptor complex(GO:0005896)
0.0	0.0	GO:0034657	GID complex(GO:0034657)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular_function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0070119	ciliary neurotrophic factor binding(GO:0070119)

Showing 1 to 1 of 1 entries

Results for AGCUUAU

Z-value: 0.21

Motif logo

miRNA associated with seed AGCUUAU

Activity profile of AGCUUAU motif

Sorted Z-values of AGCUUAU motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCUUAU

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Gene overrepresentation in cellular_component category:

Gene overrepresentation in molecular_function category: