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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for AGCUUAU

Z-value: 0.21

Motif logo

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miRNA associated with seed AGCUUAU

NamemiRBASE accession
hsa-miR-21-5p
MIMAT0000076
hsa-miR-590-5p
MIMAT0003258

Activity profile of AGCUUAU motif

Sorted Z-values of AGCUUAU motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr10_+_112631547 0.08 ENST00000280154.7
ENST00000393104.2
PDCD4
programmed cell death 4 (neoplastic transformation inhibitor)
chr22_+_33197683 0.07 ENST00000266085.6
TIMP3
TIMP metallopeptidase inhibitor 3
chr4_-_140098339 0.07 ENST00000394235.2
ELF2
E74-like factor 2 (ets domain transcription factor)
chr5_+_67511524 0.07 ENST00000521381.1
ENST00000521657.1
PIK3R1
phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
chr11_-_94964354 0.07 ENST00000536441.1
SESN3
sestrin 3
chr1_+_154377669 0.06 ENST00000368485.3
ENST00000344086.4
IL6R
interleukin 6 receptor
chr20_+_56884752 0.06 ENST00000244040.3
RAB22A
RAB22A, member RAS oncogene family
chr7_-_91875358 0.06 ENST00000458177.1
ENST00000394507.1
ENST00000340022.2
ENST00000444960.1
KRIT1
KRIT1, ankyrin repeat containing
chr7_+_102715315 0.05 ENST00000428183.2
ENST00000323716.3
ENST00000441711.2
ENST00000454559.1
ENST00000425331.1
ENST00000541300.1
ARMC10
armadillo repeat containing 10
chr6_-_82462425 0.05 ENST00000369754.3
ENST00000320172.6
ENST00000369756.3
FAM46A
family with sequence similarity 46, member A
chr3_+_141205852 0.05 ENST00000286364.3
ENST00000452898.1
RASA2
RAS p21 protein activator 2
chr15_-_50978965 0.05 ENST00000560955.1
ENST00000313478.7
TRPM7
transient receptor potential cation channel, subfamily M, member 7
chr20_-_23030296 0.04 ENST00000377103.2
THBD
thrombomodulin
chr3_-_18466787 0.04 ENST00000338745.6
ENST00000450898.1
SATB1
SATB homeobox 1
chrX_+_123095155 0.04 ENST00000371160.1
ENST00000435103.1
STAG2
stromal antigen 2
chr5_+_135364584 0.04 ENST00000442011.2
ENST00000305126.8
TGFBI
transforming growth factor, beta-induced, 68kDa
chr3_+_110790590 0.04 ENST00000485303.1
PVRL3
poliovirus receptor-related 3
chr1_-_220101944 0.03 ENST00000366926.3
ENST00000536992.1
SLC30A10
solute carrier family 30, member 10
chr3_+_159706537 0.03 ENST00000305579.2
ENST00000480787.1
ENST00000466512.1
IL12A
interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)
chr10_+_72164135 0.03 ENST00000373218.4
EIF4EBP2
eukaryotic translation initiation factor 4E binding protein 2
chr2_+_86947296 0.03 ENST00000283632.4
RMND5A
required for meiotic nuclear division 5 homolog A (S. cerevisiae)
chr3_+_152017181 0.03 ENST00000498502.1
ENST00000324196.5
ENST00000545754.1
ENST00000357472.3
MBNL1
muscleblind-like splicing regulator 1
chr10_+_94050913 0.03 ENST00000358935.2
MARCH5
membrane-associated ring finger (C3HC4) 5
chr15_-_33360085 0.03 ENST00000334528.9
FMN1
formin 1
chr4_+_113152881 0.03 ENST00000274000.5
AP1AR
adaptor-related protein complex 1 associated regulatory protein
chr17_-_30669138 0.03 ENST00000225805.4
ENST00000577809.1
C17orf75
chromosome 17 open reading frame 75
chr9_+_36036430 0.03 ENST00000377966.3
RECK
reversion-inducing-cysteine-rich protein with kazal motifs
chr11_+_32851487 0.03 ENST00000257836.3
PRRG4
proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
chr7_-_92463210 0.03 ENST00000265734.4
CDK6
cyclin-dependent kinase 6
chr3_-_113465065 0.03 ENST00000497255.1
ENST00000478020.1
ENST00000240922.3
ENST00000493900.1
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr4_+_38665810 0.03 ENST00000261438.5
ENST00000514033.1
KLF3
Kruppel-like factor 3 (basic)
chr2_-_71454185 0.03 ENST00000244221.8
PAIP2B
poly(A) binding protein interacting protein 2B
chr4_-_103748880 0.03 ENST00000453744.2
ENST00000349311.8
UBE2D3
ubiquitin-conjugating enzyme E2D 3
chr1_+_178694300 0.03 ENST00000367635.3
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2
chr3_+_28283069 0.02 ENST00000466830.1
ENST00000423894.1
CMC1
C-x(9)-C motif containing 1
chr2_+_47630108 0.02 ENST00000233146.2
ENST00000454849.1
ENST00000543555.1
MSH2
mutS homolog 2
chr2_-_43453734 0.02 ENST00000282388.3
ZFP36L2
ZFP36 ring finger protein-like 2
chr1_-_207224307 0.02 ENST00000315927.4
YOD1
YOD1 deubiquitinase
chr11_-_79151695 0.02 ENST00000278550.7
TENM4
teneurin transmembrane protein 4
chr14_+_57735614 0.02 ENST00000261558.3
AP5M1
adaptor-related protein complex 5, mu 1 subunit
chr4_+_144257915 0.02 ENST00000262995.4
GAB1
GRB2-associated binding protein 1
chr18_-_29522989 0.02 ENST00000582539.1
ENST00000283351.4
ENST00000582513.1
TRAPPC8
trafficking protein particle complex 8
chr9_-_99180597 0.02 ENST00000375256.4
ZNF367
zinc finger protein 367
chr1_-_214724566 0.02 ENST00000366956.5
PTPN14
protein tyrosine phosphatase, non-receptor type 14
chr12_+_12764773 0.02 ENST00000228865.2
CREBL2
cAMP responsive element binding protein-like 2
chr11_+_101981169 0.02 ENST00000526343.1
ENST00000282441.5
ENST00000537274.1
ENST00000345877.2
YAP1
Yes-associated protein 1
chr8_-_75233563 0.02 ENST00000342232.4
JPH1
junctophilin 1
chr16_+_57392684 0.02 ENST00000219235.4
CCL22
chemokine (C-C motif) ligand 22
chr11_-_115375107 0.02 ENST00000545380.1
ENST00000452722.3
ENST00000537058.1
ENST00000536727.1
ENST00000542447.2
ENST00000331581.6
CADM1
cell adhesion molecule 1
chr2_-_180129484 0.02 ENST00000428443.3
SESTD1
SEC14 and spectrin domains 1
chr3_-_72496035 0.02 ENST00000477973.2
RYBP
RING1 and YY1 binding protein
chr4_+_48018781 0.02 ENST00000295461.5
NIPAL1
NIPA-like domain containing 1
chr2_+_170683942 0.02 ENST00000272793.5
UBR3
ubiquitin protein ligase E3 component n-recognin 3 (putative)
chr3_+_181429704 0.02 ENST00000431565.2
ENST00000325404.1
SOX2
SRY (sex determining region Y)-box 2
chr8_-_82024290 0.02 ENST00000220597.4
PAG1
phosphoprotein associated with glycosphingolipid microdomains 1
chr2_-_37193606 0.02 ENST00000379213.2
ENST00000263918.4
STRN
striatin, calmodulin binding protein
chrX_+_72783026 0.01 ENST00000373504.6
ENST00000373502.5
CHIC1
cysteine-rich hydrophobic domain 1
chr12_+_5541267 0.01 ENST00000423158.3
NTF3
neurotrophin 3
chr4_-_102268628 0.01 ENST00000323055.6
ENST00000512215.1
ENST00000394854.3
PPP3CA
protein phosphatase 3, catalytic subunit, alpha isozyme
chr16_+_12070567 0.01 ENST00000566228.1
SNX29
sorting nexin 29
chr4_-_100867864 0.01 ENST00000442697.2
DNAJB14
DnaJ (Hsp40) homolog, subfamily B, member 14
chr4_-_87281224 0.01 ENST00000395169.3
ENST00000395161.2
MAPK10
mitogen-activated protein kinase 10
chr8_-_81787006 0.01 ENST00000327835.3
ZNF704
zinc finger protein 704
chr18_-_72921303 0.01 ENST00000322342.3
ZADH2
zinc binding alcohol dehydrogenase domain containing 2
chr2_-_201936302 0.01 ENST00000453765.1
ENST00000452799.1
ENST00000446678.1
ENST00000418596.3
FAM126B
family with sequence similarity 126, member B
chr8_-_117886955 0.01 ENST00000297338.2
RAD21
RAD21 homolog (S. pombe)
chr8_+_98881268 0.01 ENST00000254898.5
ENST00000524308.1
ENST00000522025.2
MATN2
matrilin 2
chr6_+_148663729 0.01 ENST00000367467.3
SASH1
SAM and SH3 domain containing 1
chr3_+_29322803 0.01 ENST00000396583.3
ENST00000383767.2
RBMS3
RNA binding motif, single stranded interacting protein 3
chrX_-_20284958 0.01 ENST00000379565.3
RPS6KA3
ribosomal protein S6 kinase, 90kDa, polypeptide 3
chr18_+_67956135 0.01 ENST00000397942.3
SOCS6
suppressor of cytokine signaling 6
chr2_+_20646824 0.01 ENST00000272233.4
RHOB
ras homolog family member B
chr10_-_14590644 0.01 ENST00000378470.1
FAM107B
family with sequence similarity 107, member B
chr2_-_218808771 0.01 ENST00000449814.1
ENST00000171887.4
TNS1
tensin 1
chr17_+_38278530 0.01 ENST00000398532.4
MSL1
male-specific lethal 1 homolog (Drosophila)
chr10_-_119134918 0.01 ENST00000334464.5
PDZD8
PDZ domain containing 8
chr16_+_69599861 0.01 ENST00000354436.2
NFAT5
nuclear factor of activated T-cells 5, tonicity-responsive
chr15_+_59063478 0.01 ENST00000559228.1
ENST00000450403.2
FAM63B
family with sequence similarity 63, member B
chr12_-_42538657 0.01 ENST00000398675.3
GXYLT1
glucoside xylosyltransferase 1
chr5_+_172483347 0.01 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
CREBRF
CREB3 regulatory factor
chr15_+_66161871 0.01 ENST00000569896.1
RAB11A
RAB11A, member RAS oncogene family
chr9_+_15553055 0.01 ENST00000380701.3
CCDC171
coiled-coil domain containing 171
chr11_+_120207787 0.01 ENST00000397843.2
ENST00000356641.3
ARHGEF12
Rho guanine nucleotide exchange factor (GEF) 12
chr5_+_170846640 0.01 ENST00000274625.5
FGF18
fibroblast growth factor 18
chr11_-_130786400 0.01 ENST00000265909.4
SNX19
sorting nexin 19
chr5_-_89770582 0.01 ENST00000316610.6
MBLAC2
metallo-beta-lactamase domain containing 2
chr14_+_57046500 0.01 ENST00000261556.6
TMEM260
transmembrane protein 260
chr10_+_70320413 0.01 ENST00000373644.4
TET1
tet methylcytosine dioxygenase 1
chr13_+_28813645 0.01 ENST00000282391.5
PAN3
PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
chr4_+_4861385 0.01 ENST00000382723.4
MSX1
msh homeobox 1
chr8_+_87354945 0.01 ENST00000517970.1
WWP1
WW domain containing E3 ubiquitin protein ligase 1
chr18_+_59854480 0.01 ENST00000256858.6
ENST00000398130.2
KIAA1468
KIAA1468
chrX_-_19140677 0.01 ENST00000357544.3
ENST00000379869.3
ENST00000360279.4
ENST00000379873.2
ENST00000379878.3
ENST00000354791.3
ENST00000379876.1
GPR64
G protein-coupled receptor 64
chr1_+_15853308 0.01 ENST00000375838.1
ENST00000375847.3
ENST00000375849.1
DNAJC16
DnaJ (Hsp40) homolog, subfamily C, member 16
chr1_+_203274639 0.01 ENST00000290551.4
BTG2
BTG family, member 2
chr17_+_30264014 0.01 ENST00000322652.5
ENST00000580398.1
SUZ12
SUZ12 polycomb repressive complex 2 subunit
chr17_-_33416231 0.01 ENST00000584655.1
ENST00000447669.2
ENST00000315249.7
RFFL
ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
chr12_+_69864129 0.01 ENST00000547219.1
ENST00000299293.2
ENST00000549921.1
ENST00000550316.1
ENST00000548154.1
ENST00000547414.1
ENST00000550389.1
ENST00000550937.1
ENST00000549092.1
ENST00000550169.1
FRS2
fibroblast growth factor receptor substrate 2
chr9_-_123476719 0.01 ENST00000373930.3
MEGF9
multiple EGF-like-domains 9
chr20_+_62371206 0.01 ENST00000266077.2
SLC2A4RG
SLC2A4 regulator
chr17_+_58755184 0.01 ENST00000589222.1
ENST00000407086.3
ENST00000390652.5
BCAS3
breast carcinoma amplified sequence 3
chr1_+_169764163 0.01 ENST00000413811.2
ENST00000359326.4
ENST00000456684.1
C1orf112
chromosome 1 open reading frame 112
chr14_-_31676964 0.01 ENST00000553700.1
HECTD1
HECT domain containing E3 ubiquitin protein ligase 1
chr16_-_75498553 0.01 ENST00000569276.1
ENST00000357613.4
ENST00000561878.1
ENST00000566980.1
ENST00000567194.1
TMEM170A
RP11-77K12.1
transmembrane protein 170A
Uncharacterized protein
chr3_+_98451275 0.01 ENST00000265261.6
ENST00000497008.1
ST3GAL6
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
chr11_-_110167352 0.01 ENST00000533991.1
ENST00000528498.1
ENST00000405097.1
ENST00000528900.1
ENST00000530301.1
ENST00000343115.4
RDX
radixin
chr17_+_36452989 0.01 ENST00000312513.5
ENST00000582535.1
MRPL45
mitochondrial ribosomal protein L45
chr19_+_14492247 0.01 ENST00000357355.3
ENST00000592261.2
ENST00000242786.5
CD97
CD97 molecule
chr6_+_142468361 0.01 ENST00000367630.4
VTA1
vesicle (multivesicular body) trafficking 1
chrX_+_100805496 0.01 ENST00000372829.3
ARMCX1
armadillo repeat containing, X-linked 1
chr1_+_39456895 0.01 ENST00000432648.3
ENST00000446189.2
ENST00000372984.4
AKIRIN1
akirin 1
chr1_+_222791417 0.01 ENST00000344922.5
ENST00000344441.6
ENST00000344507.1
MIA3
melanoma inhibitory activity family, member 3
chr5_+_154238096 0.01 ENST00000517568.1
ENST00000524105.1
ENST00000285896.6
CNOT8
CCR4-NOT transcription complex, subunit 8
chr3_+_186648274 0.01 ENST00000169298.3
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr16_+_22019404 0.01 ENST00000542527.2
ENST00000569656.1
ENST00000562695.1
C16orf52
chromosome 16 open reading frame 52
chr1_-_115632035 0.01 ENST00000433172.1
ENST00000369514.2
ENST00000369516.2
ENST00000369515.2
TSPAN2
tetraspanin 2
chr4_-_89744457 0.01 ENST00000395002.2
FAM13A
family with sequence similarity 13, member A
chr10_+_76871454 0.00 ENST00000372687.4
SAMD8
sterile alpha motif domain containing 8
chr7_-_30029367 0.00 ENST00000242059.5
SCRN1
secernin 1
chr1_+_224301787 0.00 ENST00000366862.5
ENST00000424254.2
FBXO28
F-box protein 28
chr3_-_107809816 0.00 ENST00000361309.5
ENST00000355354.7
CD47
CD47 molecule
chr17_+_35766965 0.00 ENST00000394395.2
ENST00000589153.1
ENST00000586023.1
TADA2A
transcriptional adaptor 2A
chr2_-_158485387 0.00 ENST00000243349.8
ACVR1C
activin A receptor, type IC
chr6_+_4021554 0.00 ENST00000337659.6
PRPF4B
pre-mRNA processing factor 4B
chr2_-_69870835 0.00 ENST00000409085.4
ENST00000406297.3
AAK1
AP2 associated kinase 1
chr5_+_179921430 0.00 ENST00000393356.1
CNOT6
CCR4-NOT transcription complex, subunit 6
chr4_+_81951957 0.00 ENST00000282701.2
BMP3
bone morphogenetic protein 3
chr13_-_36920420 0.00 ENST00000438666.2
SPG20
spastic paraplegia 20 (Troyer syndrome)
chr5_-_38595498 0.00 ENST00000263409.4
LIFR
leukemia inhibitory factor receptor alpha
chr8_+_9413410 0.00 ENST00000520408.1
ENST00000310430.6
ENST00000522110.1
TNKS
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
chr2_-_64371546 0.00 ENST00000358912.4
PELI1
pellino E3 ubiquitin protein ligase 1
chr10_-_75910789 0.00 ENST00000355264.4
AP3M1
adaptor-related protein complex 3, mu 1 subunit
chr12_+_22778009 0.00 ENST00000266517.4
ENST00000335148.3
ETNK1
ethanolamine kinase 1
chr4_+_99916765 0.00 ENST00000296411.6
METAP1
methionyl aminopeptidase 1
chr16_-_47007545 0.00 ENST00000317089.5
DNAJA2
DnaJ (Hsp40) homolog, subfamily A, member 2
chr8_-_10588010 0.00 ENST00000304501.1
SOX7
SRY (sex determining region Y)-box 7
chr12_-_10320190 0.00 ENST00000543993.1
ENST00000339968.6
OLR1
oxidized low density lipoprotein (lectin-like) receptor 1
chr17_+_60536002 0.00 ENST00000582809.1
TLK2
tousled-like kinase 2
chr2_-_85581701 0.00 ENST00000295802.4
RETSAT
retinol saturase (all-trans-retinol 13,14-reductase)
chr5_+_86564739 0.00 ENST00000456692.2
ENST00000512763.1
ENST00000506290.1
RASA1
RAS p21 protein activator (GTPase activating protein) 1
chr10_+_75757863 0.00 ENST00000372755.3
ENST00000211998.4
ENST00000417648.2
VCL
vinculin
chr1_+_36273743 0.00 ENST00000373210.3
AGO4
argonaute RISC catalytic component 4
chr6_+_119215308 0.00 ENST00000229595.5
ASF1A
anti-silencing function 1A histone chaperone
chr7_+_89975979 0.00 ENST00000257659.8
ENST00000222511.6
ENST00000417207.1
GTPBP10
GTP-binding protein 10 (putative)
chr2_+_36582857 0.00 ENST00000280527.2
CRIM1
cysteine rich transmembrane BMP regulator 1 (chordin-like)
chr9_-_86595503 0.00 ENST00000376281.4
ENST00000376264.2
HNRNPK
heterogeneous nuclear ribonucleoprotein K
chr6_+_36562132 0.00 ENST00000373715.6
ENST00000339436.7
SRSF3
serine/arginine-rich splicing factor 3
chr5_-_32313019 0.00 ENST00000280285.5
ENST00000264934.5
MTMR12
myotubularin related protein 12
chr5_+_10353780 0.00 ENST00000449913.2
ENST00000503788.1
ENST00000274140.5
MARCH6
membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
chr1_+_113010056 0.00 ENST00000369686.5
WNT2B
wingless-type MMTV integration site family, member 2B
chr8_-_41909496 0.00 ENST00000265713.2
ENST00000406337.1
ENST00000396930.3
ENST00000485568.1
ENST00000426524.1
KAT6A
K(lysine) acetyltransferase 6A
chr7_+_138916231 0.00 ENST00000473989.3
ENST00000288561.8
UBN2
ubinuclein 2
chr4_+_86396265 0.00 ENST00000395184.1
ARHGAP24
Rho GTPase activating protein 24
chr21_-_32931290 0.00 ENST00000286827.3
TIAM1
T-cell lymphoma invasion and metastasis 1
chr12_-_12419703 0.00 ENST00000543091.1
ENST00000261349.4
LRP6
low density lipoprotein receptor-related protein 6
chr3_-_160283348 0.00 ENST00000334256.4
KPNA4
karyopherin alpha 4 (importin alpha 3)
chr1_+_33005020 0.00 ENST00000373510.4
ENST00000316459.4
ZBTB8A
zinc finger and BTB domain containing 8A
chr12_+_65563329 0.00 ENST00000308330.2
LEMD3
LEM domain containing 3

Network of associatons between targets according to the STRING database.

First level regulatory network of AGCUUAU

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:1904761 negative regulation of myofibroblast differentiation(GO:1904761)
0.0 0.1 GO:1903984 positive regulation of TRAIL-activated apoptotic signaling pathway(GO:1903984)
0.0 0.1 GO:0002384 hepatic immune response(GO:0002384)
0.0 0.0 GO:0010961 cellular magnesium ion homeostasis(GO:0010961) calcium-dependent cell-matrix adhesion(GO:0016340)
0.0 0.0 GO:0048203 vesicle targeting, trans-Golgi to endosome(GO:0048203)

Gene overrepresentation in cellular_component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005896 interleukin-6 receptor complex(GO:0005896)
0.0 0.0 GO:0034657 GID complex(GO:0034657)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0070119 ciliary neurotrophic factor binding(GO:0070119)