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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for AAUGCCC

Z-value: 0.33

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miRNA associated with seed AAUGCCC

NamemiRBASE accession
hsa-miR-365a-3p
MIMAT0000710
hsa-miR-365b-3p
MIMAT0022834

Activity profile of AAUGCCC motif

Sorted Z-values of AAUGCCC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of AAUGCCC

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr3_-_123603137 0.13 ENST00000360304.3
ENST00000359169.1
ENST00000346322.5
ENST00000360772.3
 MYLK
 myosin light chain kinase
chr3_+_23986748 0.13 ENST00000312521.4
 NR1D2
 nuclear receptor subfamily 1, group D, member 2
chr2_+_46926048 0.09 ENST00000306503.5
 SOCS5
 suppressor of cytokine signaling 5
chr1_-_46598284 0.08 ENST00000423209.1
ENST00000262741.5
 PIK3R3
 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
chr11_+_34642656 0.07 ENST00000257831.3
ENST00000450654.2
 EHF
 ets homologous factor
chr13_-_46425865 0.07 ENST00000400405.2
 SIAH3
 siah E3 ubiquitin protein ligase family member 3
chr10_-_98273668 0.07 ENST00000357947.3
 TLL2
 tolloid-like 2
chr5_-_142065612 0.07 ENST00000360966.5
ENST00000411960.1
 FGF1
 fibroblast growth factor 1 (acidic)
chr1_-_91487013 0.06 ENST00000347275.5
ENST00000370440.1
 ZNF644
 zinc finger protein 644
chr1_-_244013384 0.06 ENST00000366539.1
 AKT3
 v-akt murine thymoma viral oncogene homolog 3
chr12_-_42538657 0.06 ENST00000398675.3
 GXYLT1
 glucoside xylosyltransferase 1
chr4_-_103748880 0.06 ENST00000453744.2
ENST00000349311.8
 UBE2D3
 ubiquitin-conjugating enzyme E2D 3
chr17_-_48072574 0.06 ENST00000434704.2
 DLX3
 distal-less homeobox 3
chr20_+_56884752 0.05 ENST00000244040.3
 RAB22A
 RAB22A, member RAS oncogene family
chr2_-_183903133 0.05 ENST00000361354.4
 NCKAP1
 NCK-associated protein 1
chr10_-_98346801 0.05 ENST00000371142.4
 TM9SF3
 transmembrane 9 superfamily member 3
chr2_-_153574480 0.05 ENST00000410080.1
 PRPF40A
 PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
chr1_-_78225482 0.05 ENST00000524778.1
ENST00000370794.3
ENST00000370793.1
ENST00000370792.3
 USP33
 ubiquitin specific peptidase 33
chr13_-_21476900 0.05 ENST00000400602.2
ENST00000255305.6
 XPO4
 exportin 4
chr3_+_113775576 0.04 ENST00000485050.1
ENST00000281273.4
 QTRTD1
 queuine tRNA-ribosyltransferase domain containing 1
chr10_-_62149433 0.04 ENST00000280772.2
 ANK3
 ankyrin 3, node of Ranvier (ankyrin G)
chr3_-_33481835 0.04 ENST00000283629.3
 UBP1
 upstream binding protein 1 (LBP-1a)
chr6_-_111804393 0.04 ENST00000368802.3
ENST00000368805.1
 REV3L
 REV3-like, polymerase (DNA directed), zeta, catalytic subunit
chr15_+_52121822 0.04 ENST00000558455.1
ENST00000308580.7
 TMOD3
 tropomodulin 3 (ubiquitous)
chr1_+_78470530 0.04 ENST00000370763.5
 DNAJB4
 DnaJ (Hsp40) homolog, subfamily B, member 4
chrX_-_153979315 0.04 ENST00000369575.3
ENST00000369568.4
ENST00000424127.2
 GAB3
 GRB2-associated binding protein 3
chr5_-_90679145 0.04 ENST00000265138.3
 ARRDC3
 arrestin domain containing 3
chr6_-_46138676 0.04 ENST00000371383.2
ENST00000230565.3
 ENPP5
 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
chr4_+_91048706 0.04 ENST00000509176.1
 CCSER1
 coiled-coil serine-rich protein 1
chr5_+_172483347 0.04 ENST00000522692.1
ENST00000296953.2
ENST00000540014.1
ENST00000520420.1
 CREBRF
 CREB3 regulatory factor
chr1_-_23857698 0.04 ENST00000361729.2
 E2F2
 E2F transcription factor 2
chr10_+_89622870 0.04 ENST00000371953.3
 PTEN
 phosphatase and tensin homolog
chr4_+_38665810 0.04 ENST00000261438.5
ENST00000514033.1
 KLF3
 Kruppel-like factor 3 (basic)
chr6_+_16129308 0.04 ENST00000356840.3
ENST00000349606.4
 MYLIP
 myosin regulatory light chain interacting protein
chrX_-_109561294 0.04 ENST00000372059.2
ENST00000262844.5
 AMMECR1
 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
chr1_+_97187318 0.04 ENST00000609116.1
ENST00000370198.1
ENST00000370197.1
ENST00000426398.2
ENST00000394184.3
 PTBP2
 polypyrimidine tract binding protein 2
chr17_+_55333876 0.04 ENST00000284073.2
 MSI2
 musashi RNA-binding protein 2
chr12_+_68042495 0.03 ENST00000344096.3
 DYRK2
 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
chr5_-_89825328 0.03 ENST00000500869.2
ENST00000315948.6
ENST00000509384.1
 LYSMD3
 LysM, putative peptidoglycan-binding, domain containing 3
chr9_+_114659046 0.03 ENST00000374279.3
 UGCG
 UDP-glucose ceramide glucosyltransferase
chr8_+_59323823 0.03 ENST00000399598.2
 UBXN2B
 UBX domain protein 2B
chr2_+_61108650 0.03 ENST00000295025.8
 REL
 v-rel avian reticuloendotheliosis viral oncogene homolog
chr1_+_36396677 0.03 ENST00000373191.4
ENST00000397828.2
 AGO3
 argonaute RISC catalytic component 3
chr14_-_61190754 0.03 ENST00000216513.4
 SIX4
 SIX homeobox 4
chr12_-_75905374 0.03 ENST00000438169.2
ENST00000229214.4
 KRR1
 KRR1, small subunit (SSU) processome component, homolog (yeast)
chr1_-_155881156 0.03 ENST00000539040.1
ENST00000368323.3
 RIT1
 Ras-like without CAAX 1
chr1_-_22109682 0.03 ENST00000400301.1
ENST00000532737.1
 USP48
 ubiquitin specific peptidase 48
chr16_-_79634595 0.03 ENST00000326043.4
ENST00000393350.1
 MAF
 v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
chr8_-_38239732 0.03 ENST00000534155.1
ENST00000433384.2
ENST00000317025.8
ENST00000316985.3
 WHSC1L1
 Wolf-Hirschhorn syndrome candidate 1-like 1
chr5_+_112312416 0.03 ENST00000389063.2
 DCP2
 decapping mRNA 2
chr21_+_38071430 0.03 ENST00000290399.6
 SIM2
 single-minded family bHLH transcription factor 2
chr16_+_53088885 0.03 ENST00000566029.1
ENST00000447540.1
 CHD9
 chromodomain helicase DNA binding protein 9
chr12_+_56401268 0.03 ENST00000262032.5
 IKZF4
 IKAROS family zinc finger 4 (Eos)
chr12_+_66217911 0.03 ENST00000403681.2
 HMGA2
 high mobility group AT-hook 2
chr19_-_49576198 0.03 ENST00000221444.1
 KCNA7
 potassium voltage-gated channel, shaker-related subfamily, member 7
chr8_+_124780672 0.03 ENST00000521166.1
ENST00000334705.7
 FAM91A1
 family with sequence similarity 91, member A1
chr14_-_55878538 0.03 ENST00000247178.5
 ATG14
 autophagy related 14
chr2_-_180129484 0.03 ENST00000428443.3
 SESTD1
 SEC14 and spectrin domains 1
chr5_-_39074479 0.02 ENST00000514735.1
ENST00000296782.5
ENST00000357387.3
 RICTOR
 RPTOR independent companion of MTOR, complex 2
chr13_-_53024725 0.02 ENST00000378060.4
 VPS36
 vacuolar protein sorting 36 homolog (S. cerevisiae)
chr3_-_113465065 0.02 ENST00000497255.1
ENST00000478020.1
ENST00000240922.3
ENST00000493900.1
 NAA50
 N(alpha)-acetyltransferase 50, NatE catalytic subunit
chr2_-_208634287 0.02 ENST00000295417.3
 FZD5
 frizzled family receptor 5
chr1_+_145611010 0.02 ENST00000369291.5
 RNF115
 ring finger protein 115
chr15_+_96873921 0.02 ENST00000394166.3
 NR2F2
 nuclear receptor subfamily 2, group F, member 2
chr8_-_82598511 0.02 ENST00000449740.2
ENST00000311489.4
ENST00000521360.1
ENST00000519964.1
ENST00000518202.1
 IMPA1
 inositol(myo)-1(or 4)-monophosphatase 1
chr4_+_37245799 0.02 ENST00000309447.5
 KIAA1239
 KIAA1239
chr17_-_16118835 0.02 ENST00000582357.1
ENST00000436828.1
ENST00000411510.1
ENST00000268712.3
 NCOR1
 nuclear receptor corepressor 1
chr15_-_64995399 0.02 ENST00000559753.1
ENST00000560258.2
ENST00000559912.2
ENST00000326005.6
 OAZ2
 ornithine decarboxylase antizyme 2
chr11_-_77532050 0.02 ENST00000308488.6
 RSF1
 remodeling and spacing factor 1
chr6_-_88411911 0.02 ENST00000257787.5
 AKIRIN2
 akirin 2
chr15_+_41523335 0.02 ENST00000334660.5
 CHP1
 calcineurin-like EF-hand protein 1
chr3_+_101292939 0.02 ENST00000265260.3
ENST00000469941.1
ENST00000296024.5
 PCNP
 PEST proteolytic signal containing nuclear protein
chr9_-_6007787 0.02 ENST00000399933.3
ENST00000381461.2
ENST00000513355.2
 KIAA2026
 KIAA2026
chr16_+_67063036 0.02 ENST00000290858.6
ENST00000564034.1
 CBFB
 core-binding factor, beta subunit
chrX_-_3631635 0.02 ENST00000262848.5
 PRKX
 protein kinase, X-linked
chr10_+_180987 0.02 ENST00000381591.1
 ZMYND11
 zinc finger, MYND-type containing 11
chr5_+_122181184 0.02 ENST00000513881.1
 SNX24
 sorting nexin 24
chr10_+_22610124 0.02 ENST00000376663.3
 BMI1
 BMI1 polycomb ring finger oncogene
chr12_-_89918522 0.02 ENST00000529983.2
 GALNT4
 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)
chr5_-_142783175 0.02 ENST00000231509.3
ENST00000394464.2
 NR3C1
 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
chr3_+_152552685 0.02 ENST00000305097.3
 P2RY1
 purinergic receptor P2Y, G-protein coupled, 1
chr13_+_93879085 0.02 ENST00000377047.4
 GPC6
 glypican 6
chr12_-_89919965 0.02 ENST00000548729.1
 POC1B-GALNT4
 POC1B-GALNT4 readthrough
chr2_+_179345173 0.02 ENST00000234453.5
 PLEKHA3
 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
chr17_+_68165657 0.02 ENST00000243457.3
 KCNJ2
 potassium inwardly-rectifying channel, subfamily J, member 2
chr21_-_28217721 0.02 ENST00000284984.3
 ADAMTS1
 ADAM metallopeptidase with thrombospondin type 1 motif, 1
chr3_+_43328004 0.01 ENST00000454177.1
ENST00000429705.2
ENST00000296088.7
ENST00000437827.1
 SNRK
 SNF related kinase
chr13_+_114238997 0.01 ENST00000538138.1
ENST00000375370.5
 TFDP1
 transcription factor Dp-1
chr11_+_2466218 0.01 ENST00000155840.5
 KCNQ1
 potassium voltage-gated channel, KQT-like subfamily, member 1
chr11_-_27528301 0.01 ENST00000524596.1
ENST00000278193.2
 LIN7C
 lin-7 homolog C (C. elegans)
chr12_-_15942309 0.01 ENST00000544064.1
ENST00000543523.1
ENST00000536793.1
 EPS8
 epidermal growth factor receptor pathway substrate 8
chr3_+_38495333 0.01 ENST00000352511.4
 ACVR2B
 activin A receptor, type IIB
chr1_-_28415204 0.01 ENST00000373871.3
 EYA3
 eyes absent homolog 3 (Drosophila)
chr11_-_31839488 0.01 ENST00000419022.1
ENST00000379132.3
ENST00000379129.2
 PAX6
 paired box 6
chr3_-_48885228 0.01 ENST00000454963.1
ENST00000296446.8
ENST00000419216.1
ENST00000265563.8
 PRKAR2A
 protein kinase, cAMP-dependent, regulatory, type II, alpha
chr17_-_37557846 0.01 ENST00000394294.3
ENST00000583610.1
ENST00000264658.6
 FBXL20
 F-box and leucine-rich repeat protein 20
chr11_+_64073699 0.01 ENST00000405666.1
ENST00000468670.1
 ESRRA
 estrogen-related receptor alpha
chr3_-_11762202 0.01 ENST00000445411.1
ENST00000404339.1
ENST00000273038.3
 VGLL4
 vestigial like 4 (Drosophila)
chr2_-_157189180 0.01 ENST00000539077.1
ENST00000424077.1
ENST00000426264.1
ENST00000339562.4
ENST00000421709.1
 NR4A2
 nuclear receptor subfamily 4, group A, member 2
chr7_+_104654623 0.01 ENST00000311117.3
ENST00000334877.4
ENST00000257745.4
ENST00000334914.7
ENST00000478990.1
ENST00000495267.1
ENST00000476671.1
 KMT2E
 lysine (K)-specific methyltransferase 2E
chr1_-_205719295 0.01 ENST00000367142.4
 NUCKS1
 nuclear casein kinase and cyclin-dependent kinase substrate 1
chr17_+_28804380 0.01 ENST00000225724.5
ENST00000451249.2
ENST00000467337.2
ENST00000581721.1
ENST00000414833.2
 GOSR1
 golgi SNAP receptor complex member 1
chr10_-_120514720 0.01 ENST00000369151.3
ENST00000340214.4
 CACUL1
 CDK2-associated, cullin domain 1
chr4_-_11431389 0.01 ENST00000002596.5
 HS3ST1
 heparan sulfate (glucosamine) 3-O-sulfotransferase 1
chr2_-_39348137 0.01 ENST00000426016.1
 SOS1
 son of sevenless homolog 1 (Drosophila)
chr8_+_128426535 0.01 ENST00000465342.2
 POU5F1B
 POU class 5 homeobox 1B
chr7_-_150652924 0.01 ENST00000330883.4
 KCNH2
 potassium voltage-gated channel, subfamily H (eag-related), member 2
chr5_-_32444828 0.01 ENST00000265069.8
 ZFR
 zinc finger RNA binding protein
chr11_-_68609377 0.01 ENST00000265641.5
ENST00000376618.2
 CPT1A
 carnitine palmitoyltransferase 1A (liver)
chr5_-_65017921 0.01 ENST00000381007.4
 SGTB
 small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
chr18_+_43753974 0.01 ENST00000282059.6
ENST00000321319.6
 C18orf25
 chromosome 18 open reading frame 25
chr8_+_54764346 0.01 ENST00000297313.3
ENST00000344277.6
 RGS20
 regulator of G-protein signaling 20
chr4_+_41992489 0.01 ENST00000264451.7
 SLC30A9
 solute carrier family 30 (zinc transporter), member 9
chr12_+_69864129 0.01 ENST00000547219.1
ENST00000299293.2
ENST00000549921.1
ENST00000550316.1
ENST00000548154.1
ENST00000547414.1
ENST00000550389.1
ENST00000550937.1
ENST00000549092.1
ENST00000550169.1
 FRS2
 fibroblast growth factor receptor substrate 2
chr7_+_94285637 0.01 ENST00000482108.1
ENST00000488574.1
 PEG10
 paternally expressed 10
chr2_-_200322723 0.01 ENST00000417098.1
 SATB2
 SATB homeobox 2
chr1_+_52521928 0.01 ENST00000489308.2
 BTF3L4
 basic transcription factor 3-like 4
chr3_+_51575596 0.01 ENST00000409535.2
 RAD54L2
 RAD54-like 2 (S. cerevisiae)
chr3_-_71774516 0.01 ENST00000425534.3
 EIF4E3
 eukaryotic translation initiation factor 4E family member 3
chr1_+_203274639 0.01 ENST00000290551.4
 BTG2
 BTG family, member 2
chr3_-_125094093 0.01 ENST00000484491.1
ENST00000492394.1
ENST00000471196.1
ENST00000468369.1
ENST00000544464.1
ENST00000485866.1
ENST00000360647.4
 ZNF148
 zinc finger protein 148
chr2_+_192542850 0.01 ENST00000410026.2
 NABP1
 nucleic acid binding protein 1
chr3_-_47823298 0.01 ENST00000254480.5
 SMARCC1
 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
chr4_+_145567173 0.01 ENST00000296575.3
 HHIP
 hedgehog interacting protein
chr3_-_15901278 0.01 ENST00000399451.2
 ANKRD28
 ankyrin repeat domain 28
chr10_+_101419187 0.01 ENST00000370489.4
 ENTPD7
 ectonucleoside triphosphate diphosphohydrolase 7
chr1_-_85462623 0.01 ENST00000370608.3
 MCOLN2
 mucolipin 2
chr7_-_151217001 0.01 ENST00000262187.5
 RHEB
 Ras homolog enriched in brain
chr17_+_35766965 0.01 ENST00000394395.2
ENST00000589153.1
ENST00000586023.1
 TADA2A
 transcriptional adaptor 2A
chr1_-_153588334 0.01 ENST00000476873.1
 S100A14
 S100 calcium binding protein A14
chr18_+_34409069 0.01 ENST00000543923.1
ENST00000280020.5
ENST00000435985.2
ENST00000592521.1
ENST00000587139.1
 KIAA1328
 KIAA1328
chr1_+_29063271 0.01 ENST00000373812.3
 YTHDF2
 YTH domain family, member 2
chr5_-_43313574 0.01 ENST00000325110.6
ENST00000433297.2
 HMGCS1
 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
chrX_-_70288234 0.01 ENST00000276105.3
ENST00000374274.3
 SNX12
 sorting nexin 12
chr2_+_155554797 0.01 ENST00000295101.2
 KCNJ3
 potassium inwardly-rectifying channel, subfamily J, member 3
chrX_-_74376108 0.00 ENST00000339447.4
ENST00000373394.3
ENST00000529949.1
ENST00000534524.1
ENST00000253577.3
 ABCB7
 ATP-binding cassette, sub-family B (MDR/TAP), member 7
chr7_-_141401951 0.00 ENST00000536163.1
 KIAA1147
 KIAA1147
chr15_+_68346501 0.00 ENST00000249636.6
 PIAS1
 protein inhibitor of activated STAT, 1
chr2_-_43453734 0.00 ENST00000282388.3
 ZFP36L2
 ZFP36 ring finger protein-like 2
chr12_-_31479045 0.00 ENST00000539409.1
ENST00000395766.1
 FAM60A
 family with sequence similarity 60, member A
chr12_-_67072714 0.00 ENST00000545666.1
ENST00000398016.3
ENST00000359742.4
ENST00000286445.7
ENST00000538211.1
 GRIP1
 glutamate receptor interacting protein 1
chr1_+_202976493 0.00 ENST00000367242.3
 TMEM183A
 transmembrane protein 183A
chr12_+_27396901 0.00 ENST00000541191.1
ENST00000389032.3
 STK38L
 serine/threonine kinase 38 like
chr1_+_161284047 0.00 ENST00000367975.2
ENST00000342751.4
ENST00000432287.2
ENST00000392169.2
ENST00000513009.1
 SDHC
 succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa
chr18_+_56338618 0.00 ENST00000348428.3
 MALT1
 mucosa associated lymphoid tissue lymphoma translocation gene 1
chr11_+_65101225 0.00 ENST00000528416.1
ENST00000415073.2
ENST00000252268.4
 DPF2
 D4, zinc and double PHD fingers family 2
chr10_-_105615164 0.00 ENST00000355946.2
ENST00000369774.4
 SH3PXD2A
 SH3 and PX domains 2A
chr1_+_36273743 0.00 ENST00000373210.3
 AGO4
 argonaute RISC catalytic component 4
chr3_-_79068594 0.00 ENST00000436010.2
 ROBO1
 roundabout, axon guidance receptor, homolog 1 (Drosophila)
chr22_+_32340481 0.00 ENST00000397492.1
 YWHAH
 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
chr1_-_35658736 0.00 ENST00000357214.5
 SFPQ
 splicing factor proline/glutamine-rich
chr10_+_22605304 0.00 ENST00000475460.2
ENST00000602390.1
ENST00000489125.2
ENST00000456711.1
ENST00000444869.1
 COMMD3-BMI1
COMMD3
 COMMD3-BMI1 readthrough
COMM domain containing 3
chr7_+_138145076 0.00 ENST00000343526.4
 TRIM24
 tripartite motif containing 24
chr5_+_74632993 0.00 ENST00000287936.4
 HMGCR
 3-hydroxy-3-methylglutaryl-CoA reductase
chr9_+_131445928 0.00 ENST00000372692.4
 SET
 SET nuclear oncogene
chrX_+_73641286 0.00 ENST00000587091.1
 SLC16A2
 solute carrier family 16, member 2 (thyroid hormone transporter)
chr11_+_48002076 0.00 ENST00000418331.2
ENST00000440289.2
 PTPRJ
 protein tyrosine phosphatase, receptor type, J
chr9_+_128024067 0.00 ENST00000461379.1
ENST00000394084.1
ENST00000394105.2
ENST00000470056.1
ENST00000394104.2
ENST00000265956.4
ENST00000394083.2
ENST00000495955.1
ENST00000467750.1
ENST00000297933.6
 GAPVD1
 GTPase activating protein and VPS9 domains 1
chr12_-_66524482 0.00 ENST00000446587.2
ENST00000266604.2
 LLPH
 LLP homolog, long-term synaptic facilitation (Aplysia)
chr11_-_102962929 0.00 ENST00000260247.5
 DCUN1D5
 DCN1, defective in cullin neddylation 1, domain containing 5

Gene Ontology Analysis

Gene overrepresentation in biological_process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0071638 negative regulation of monocyte chemotactic protein-1 production(GO:0071638)
0.0 0.1 GO:0060414 aorta smooth muscle tissue morphogenesis(GO:0060414)
0.0 0.1 GO:1903215 negative regulation of protein targeting to mitochondrion(GO:1903215)
0.0 0.1 GO:0048631 regulation of skeletal muscle tissue growth(GO:0048631)
0.0 0.0 GO:0071879 positive regulation of adrenergic receptor signaling pathway(GO:0071879)
0.0 0.0 GO:0006679 glucosylceramide biosynthetic process(GO:0006679)
0.0 0.0 GO:1902725 negative regulation of satellite cell differentiation(GO:1902725)

Gene overrepresentation in molecular_function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0004687 myosin light chain kinase activity(GO:0004687)