ISMARA results: AAGGUGC

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NHBE cells infected with SARS-CoV-2 Analysis Results (GEO series: GSE147507)

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Results for AAGGUGC

Z-value: 0.24

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miRNA associated with seed AAGGUGC

Name	miRBASE accession
hsa-miR-18a-5p miRBase	MIMAT0000072
hsa-miR-18b-5p miRBase	MIMAT0001412
hsa-miR-4735-3p miRBase	MIMAT0019861

Activity profile of AAGGUGC motif

Sorted Z-values of AAGGUGC motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
chr5_-_142065612 Show fit	0.11	ENST00000360966.5 ENST00000411960.1	FGF1 Ensembl NCBI GeneCards UniProt NextProt Show fit	fibroblast growth factor 1 (acidic)
chr3_-_123603137 Show fit	0.10	ENST00000360304.3 ENST00000359169.1 ENST00000346322.5 ENST00000360772.3	MYLK Ensembl NCBI GeneCards UniProt NextProt Show fit	myosin light chain kinase
chr9_-_99180597 Show fit	0.08	ENST00000375256.4	ZNF367 Ensembl NCBI GeneCards UniProt NextProt Show fit	zinc finger protein 367
chr13_-_77601282 Show fit	0.05	ENST00000355619.5	FBXL3 Ensembl NCBI GeneCards UniProt NextProt Show fit	F-box and leucine-rich repeat protein 3
chr9_-_123639600 Show fit	0.05	ENST00000373896.3	PHF19 Ensembl NCBI GeneCards UniProt NextProt Show fit	PHD finger protein 19
chr5_+_78532003 Show fit	0.05	ENST00000396137.4	JMY Ensembl NCBI GeneCards UniProt NextProt Show fit	junction mediating and regulatory protein, p53 cofactor
chr12_+_19592602 Show fit	0.04	ENST00000398864.3 ENST00000266508.9	AEBP2 Ensembl NCBI GeneCards UniProt NextProt Show fit	AE binding protein 2
chr7_-_121036337 Show fit	0.04	ENST00000426156.1 ENST00000359943.3 ENST00000412653.1	FAM3C Ensembl NCBI GeneCards UniProt NextProt Show fit	family with sequence similarity 3, member C
chr6_+_122720681 Show fit	0.04	ENST00000368455.4 ENST00000452194.1	HSF2 Ensembl NCBI GeneCards UniProt NextProt Show fit	heat shock transcription factor 2
chr4_-_185395672 Show fit	0.04	ENST00000393593.3	IRF2 Ensembl NCBI GeneCards UniProt NextProt Show fit	interferon regulatory factor 2

Showing 1 to 10 of 125 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AAGGUGC

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Gene Ontology Analysis

Gene overrepresentation in biological_process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0060414	aorta smooth muscle tissue morphogenesis(GO:0060414)

Showing 1 to 1 of 1 entries