GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Runx2 | mm39_v1_chr17_-_45125468_45125525 | 0.64 | 2.4e-05 | Click! |
Bcl11a | mm39_v1_chr11_+_24028022_24028076 | 0.64 | 2.4e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr18_-_35782412 Show fit | 27.38 |
ENSMUST00000025211.6
|
marginal zone B and B1 cell-specific protein 1 |
|
chr11_-_87766350 Show fit | 23.50 |
ENSMUST00000049768.4
|
eosinophil peroxidase |
|
chr7_-_140596811 Show fit | 22.16 |
ENSMUST00000081924.5
|
interferon induced transmembrane protein 6 |
|
chr11_+_87684548 Show fit | 21.25 |
ENSMUST00000143021.9
|
myeloperoxidase |
|
chr11_+_87684299 Show fit | 20.70 |
ENSMUST00000020779.11
|
myeloperoxidase |
|
chr19_-_20368029 Show fit | 19.60 |
ENSMUST00000235280.2
|
annexin A1 |
|
chr7_-_103477126 Show fit | 18.99 |
ENSMUST00000023934.8
|
hemoglobin, beta adult s chain |
|
chr17_+_33857030 Show fit | 18.86 |
ENSMUST00000052079.8
|
PML-RAR alpha-regulated adaptor molecule 1 |
|
chr5_+_90916370 Show fit | 17.82 |
ENSMUST00000031319.8
|
pro-platelet basic protein |
|
chr7_+_142559414 Show fit | 17.68 |
ENSMUST00000082008.12
ENSMUST00000105925.8 ENSMUST00000105924.8 |
tetraspanin 32 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
7.3 | 80.3 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
0.2 | 44.6 | GO:0050853 | B cell receptor signaling pathway(GO:0050853) |
14.0 | 41.9 | GO:0002148 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
5.5 | 27.4 | GO:0002378 | immunoglobulin biosynthetic process(GO:0002378) |
2.4 | 24.2 | GO:2000467 | positive regulation of glycogen (starch) synthase activity(GO:2000467) |
7.6 | 22.9 | GO:0002215 | defense response to nematode(GO:0002215) |
0.8 | 21.2 | GO:0030502 | negative regulation of bone mineralization(GO:0030502) |
6.9 | 20.7 | GO:0015891 | iron chelate transport(GO:0015688) siderophore transport(GO:0015891) |
3.9 | 19.6 | GO:0097350 | neutrophil clearance(GO:0097350) |
1.4 | 18.6 | GO:0043313 | regulation of neutrophil degranulation(GO:0043313) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
13.4 | 67.2 | GO:0070442 | integrin alphaIIb-beta3 complex(GO:0070442) |
3.3 | 52.3 | GO:0005766 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.1 | 33.2 | GO:0009898 | cytoplasmic side of plasma membrane(GO:0009898) |
2.3 | 25.1 | GO:0042629 | mast cell granule(GO:0042629) |
0.2 | 23.2 | GO:0019814 | immunoglobulin complex(GO:0019814) immunoglobulin complex, circulating(GO:0042571) |
1.3 | 22.8 | GO:0001931 | uropod(GO:0001931) cell trailing edge(GO:0031254) |
0.3 | 20.7 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
2.0 | 20.5 | GO:0019815 | B cell receptor complex(GO:0019815) |
3.7 | 18.6 | GO:0031838 | haptoglobin-hemoglobin complex(GO:0031838) |
0.6 | 18.3 | GO:0031528 | microvillus membrane(GO:0031528) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 63.4 | GO:0004601 | peroxidase activity(GO:0004601) |
0.3 | 56.1 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.6 | 27.5 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.2 | 27.0 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.2 | 25.3 | GO:0002020 | protease binding(GO:0002020) |
3.0 | 24.4 | GO:0008865 | fructokinase activity(GO:0008865) mannokinase activity(GO:0019158) |
0.7 | 22.8 | GO:0043274 | phospholipase binding(GO:0043274) |
0.3 | 19.7 | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity(GO:0004693) |
2.2 | 19.6 | GO:0019834 | phospholipase A2 inhibitor activity(GO:0019834) |
4.7 | 19.0 | GO:0031720 | haptoglobin binding(GO:0031720) hemoglobin alpha binding(GO:0031721) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 43.6 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.5 | 33.0 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.5 | 27.1 | PID CXCR3 PATHWAY | CXCR3-mediated signaling events |
0.3 | 25.3 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.3 | 21.7 | PID ILK PATHWAY | Integrin-linked kinase signaling |
0.2 | 19.5 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.4 | 18.9 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.4 | 17.1 | PID IGF1 PATHWAY | IGF1 pathway |
0.4 | 16.9 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
0.3 | 16.9 | PID BCR 5PATHWAY | BCR signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.4 | 23.0 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.8 | 22.8 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.6 | 21.6 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.4 | 21.5 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.4 | 21.4 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.2 | 21.1 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
1.2 | 20.9 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.5 | 19.7 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.4 | 19.7 | REACTOME G1 PHASE | Genes involved in G1 Phase |
0.3 | 19.2 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |