mm39_v1_chr10_+_79716876_79716893	11.262	Zkscan1	ENSMUST00000166201.2|Prtn3|ENSMUSG00000057729.13|proteinase 3
mm39_v1_chr17_-_33937565_33937664	8.58688	Zkscan1	ENSMUST00000174040.2|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000173015.8|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000066121.13|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000186022.7|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000173329.8|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2	ENSMUST00000172767.9|Marchf2|ENSMUSG00000079557.12|membrane associated ring-CH-type finger 2
mm39_v1_chr15_-_74983786_74983825	8.19881	Zkscan1	ENSMUST00000191451.2|Ly6c2|ENSMUSG00000022584.15|lymphocyte antigen 6 complex, locus C2	ENSMUST00000100542.10|Ly6c2|ENSMUSG00000022584.15|lymphocyte antigen 6 complex, locus C2
mm39_v1_chr8_-_72178340_72178378	6.77942	Zkscan1	ENSMUST00000153800.8|Fcho1|ENSMUSG00000070000.14|FCH domain only 1	ENSMUST00000146100.8|Fcho1|ENSMUSG00000070000.14|FCH domain only 1
mm39_v1_chr15_-_78456898_78456988	5.97381	Zkscan1	ENSMUST00000043214.8|Rac2|ENSMUSG00000033220.8|Rac family small GTPase 2
mm39_v1_chr2_+_84564394_84564451	5.67728	Zkscan1	ENSMUST00000238573.2|Ypel4|ENSMUSG00000034059.15|yippee like 4	ENSMUST00000090729.9|Ypel4|ENSMUSG00000034059.15|yippee like 4
mm39_v1_chr17_+_29042640_29042681	5.48431	Zkscan1	ENSMUST00000233088.2|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3	ENSMUST00000233182.2|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3	ENSMUST00000233520.2|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr9_+_51124983_51125008	5.31013	Zkscan1	ENSMUST00000034554.9|Pou2af1|ENSMUSG00000032053.9|POU domain, class 2, associating factor 1
mm39_v1_chrX_-_48886577_48886632	5.26657	Zkscan1	ENSMUST00000033442.14|Igsf1|ENSMUSG00000031111.17|immunoglobulin superfamily, member 1	ENSMUST00000114891.2|Igsf1|ENSMUSG00000031111.17|immunoglobulin superfamily, member 1
mm39_v1_chr15_+_75027089_75027179	5.10982	Zkscan1	ENSMUST00000190262.2|Ly6g|ENSMUSG00000022582.5|lymphocyte antigen 6 complex, locus G
mm39_v1_chr4_-_140805613_140805668	4.58937	Zkscan1	ENSMUST00000030760.15|Necap2|ENSMUSG00000028923.15|NECAP endocytosis associated 2
mm39_v1_chr15_-_74920518_74920690	4.42255	Zkscan1	ENSMUST00000185372.2|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000187347.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000188845.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000185200.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000179762.8|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000191216.7|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1	ENSMUST00000065408.16|Ly6c1|ENSMUSG00000079018.11|lymphocyte antigen 6 complex, locus C1
mm39_v1_chr17_+_29042544_29042575	4.37849	Zkscan1	ENSMUST00000140587.9|Brpf3|ENSMUSG00000063952.17|bromodomain and PHD finger containing, 3
mm39_v1_chr7_-_132415257_132415400	4.28746	Zkscan1	ENSMUST00000097999.9|Fam53b|ENSMUSG00000030956.16|family with sequence similarity 53, member B
mm39_v1_chr8_+_95712151_95712197	4.09582	Zkscan1	ENSMUST00000212799.2|Adgrg1|ENSMUSG00000031785.17|adhesion G protein-coupled receptor G1
mm39_v1_chr19_-_61216834_61216882	4.02833	Zkscan1	ENSMUST00000076046.7|Csf2ra|ENSMUSG00000059326.8|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)
mm39_v1_chr12_-_79054050_79054133	3.67209	Zkscan1	ENSMUST00000056660.13|Tmem229b|ENSMUSG00000046157.14|transmembrane protein 229B	ENSMUST00000174721.8|Tmem229b|ENSMUSG00000046157.14|transmembrane protein 229B
mm39_v1_chr9_-_103357564_103357619	3.42128	Zkscan1	ENSMUST00000124310.5|Bfsp2|ENSMUSG00000032556.12|beaded filament structural protein 2, phakinin
mm39_v1_chr13_+_50571889_50571950	3.33353	Zkscan1	ENSMUST00000046974.5|Fbxw17|ENSMUSG00000037816.11|F-box and WD-40 domain protein 17
mm39_v1_chr2_+_118428690_118428707	3.2784	Zkscan1	ENSMUST00000038341.8|Bub1b|ENSMUSG00000040084.10|BUB1B, mitotic checkpoint serine/threonine kinase
mm39_v1_chr10_-_79624758_79624819	3.26471	Zkscan1	ENSMUST00000020573.13|Prss57|ENSMUSG00000020323.15|protease, serine 57
mm39_v1_chr5_+_125518736_125518814	3.22218	Zkscan1	ENSMUST00000198811.2|Bri3bp|ENSMUSG00000037905.14|Bri3 binding protein
mm39_v1_chr10_-_81360059_81360093	3.16532	Zkscan1	ENSMUST00000043709.8|Gna15|ENSMUSG00000034792.9|guanine nucleotide binding protein, alpha 15
mm39_v1_chr6_-_83513222_83513252	3.11502	Zkscan1	ENSMUST00000075161.12|Actg2|ENSMUSG00000059430.15|actin, gamma 2, smooth muscle, enteric
mm39_v1_chr5_-_140307280_140307341	3.0122	Zkscan1	ENSMUST00000031534.9|Mad1l1|ENSMUSG00000029554.16|MAD1 mitotic arrest deficient 1-like 1
mm39_v1_chr7_-_132414823_132414891	2.99893	Zkscan1	ENSMUST00000106165.8|Fam53b|ENSMUSG00000030956.16|family with sequence similarity 53, member B
mm39_v1_chr7_-_126399778_126399923	2.94997	Zkscan1	ENSMUST00000141355.4|Aldoa|ENSMUSG00000030695.17|aldolase A, fructose-bisphosphate
mm39_v1_chrX_+_20736405_20736466	2.89643	Zkscan1	ENSMUST00000115342.10|Timp1|ENSMUSG00000001131.12|tissue inhibitor of metalloproteinase 1	ENSMUST00000009530.5|Timp1|ENSMUSG00000001131.12|tissue inhibitor of metalloproteinase 1
mm39_v1_chr6_+_47854138_47854138	2.7989	Zkscan1	ENSMUST00000061890.8|Zfp282|ENSMUSG00000025821.10|zinc finger protein 282
mm39_v1_chr12_+_111387023_111387041	2.77893	Zkscan1	ENSMUST00000220852.2|Exoc3l4|ENSMUSG00000021280.10|exocyst complex component 3-like 4
mm39_v1_chr2_+_156681927_156681952	2.38954	Zkscan1	ENSMUST00000081335.13|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr2_+_156681991_156682062	2.31324	Zkscan1	ENSMUST00000073352.10|Tgif2|ENSMUSG00000062175.14|TGFB-induced factor homeobox 2
mm39_v1_chr6_-_83513184_83513213	2.30419	Zkscan1	ENSMUST00000205926.2|Actg2|ENSMUSG00000059430.15|actin, gamma 2, smooth muscle, enteric
mm39_v1_chr7_-_97811525_97811575	2.09636	Zkscan1	ENSMUST00000107112.2|Capn5|ENSMUSG00000035547.15|calpain 5
mm39_v1_chr19_+_53298906_53298983	2.06848	Zkscan1	ENSMUST00000003870.15|Mxi1|ENSMUSG00000025025.15|MAX interactor 1, dimerization protein
mm39_v1_chr19_+_12775938_12775961	1.98352	Zkscan1	ENSMUST00000025601.8|Lpxn|ENSMUSG00000024696.10|leupaxin
mm39_v1_chr7_+_96730763_96730793	1.95384	Zkscan1	ENSMUST00000004622.7|Gab2|ENSMUSG00000004508.7|growth factor receptor bound protein 2-associated protein 2
mm39_v1_chr11_+_104468107_104468213	1.82878	Zkscan1	ENSMUST00000106956.10|Myl4|ENSMUSG00000061086.13|myosin, light polypeptide 4
mm39_v1_chr15_-_74855264_74855280	1.8041	Zkscan1	ENSMUST00000023250.11|Ly6i|ENSMUSG00000022586.12|lymphocyte antigen 6 complex, locus I	ENSMUST00000166694.2|Ly6i|ENSMUSG00000022586.12|lymphocyte antigen 6 complex, locus I
mm39_v1_chr16_+_90182895_90182910	1.74714	Zkscan1	ENSMUST00000065856.8|Hunk|ENSMUSG00000053414.9|hormonally upregulated Neu-associated kinase
mm39_v1_chr9_+_118881838_118881870	1.47505	Zkscan1	ENSMUST00000051386.13|Vill|ENSMUSG00000038775.15|villin-like	ENSMUST00000074734.13|Vill|ENSMUSG00000038775.15|villin-like
mm39_v1_chr6_-_122317484_122317520	1.4223	Zkscan1	ENSMUST00000112600.9|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr10_-_79390911_79391033	1.38528	Zkscan1	ENSMUST00000170018.2|Mier2|ENSMUSG00000042570.15|MIER family member 2	ENSMUST00000062855.15|Mier2|ENSMUSG00000042570.15|MIER family member 2	ENSMUST00000165778.8|Mier2|ENSMUSG00000042570.15|MIER family member 2	ENSMUST00000165028.8|Mier2|ENSMUSG00000042570.15|MIER family member 2
mm39_v1_chr17_+_25105617_25105739	1.35462	Zkscan1	ENSMUST00000117890.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000168265.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000120943.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000068508.13|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3	ENSMUST00000119829.8|Spsb3|ENSMUSG00000024160.17|splA/ryanodine receptor domain and SOCS box containing 3
mm39_v1_chr5_+_123532819_123532892	1.25491	Zkscan1	ENSMUST00000111596.8|Mlxip|ENSMUSG00000038342.16|MLX interacting protein	ENSMUST00000068237.12|Mlxip|ENSMUSG00000038342.16|MLX interacting protein
mm39_v1_chr11_+_69871952_69872040	1.21912	Zkscan1	ENSMUST00000108593.8|Ctdnep1|ENSMUSG00000018559.17|CTD nuclear envelope phosphatase 1
mm39_v1_chr2_+_172235702_172235750	1.16123	Zkscan1	ENSMUST00000099061.9|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4	ENSMUST00000103073.9|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4
mm39_v1_chr7_-_132415408_132415462	1.15345	Zkscan1	ENSMUST00000134946.3|Fam53b|ENSMUSG00000030956.16|family with sequence similarity 53, member B
mm39_v1_chr11_+_78717398_78717444	1.14632	Zkscan1	ENSMUST00000147875.9|Lyrm9|ENSMUSG00000072640.12|LYR motif containing 9	ENSMUST00000141321.2|Lyrm9|ENSMUSG00000072640.12|LYR motif containing 9
mm39_v1_chr11_-_69872050_69872090	1.13831	Zkscan1	ENSMUST00000108594.8|Elp5|ENSMUSG00000018565.18|elongator acetyltransferase complex subunit 5
mm39_v1_chr7_+_28834276_28834323	1.12707	Zkscan1	ENSMUST00000161522.8|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000204845.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000205027.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000204194.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000203070.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4	ENSMUST00000203380.3|Rasgrp4|ENSMUSG00000030589.16|RAS guanyl releasing protein 4
mm39_v1_chr3_+_89043440_89043490	1.12359	Zkscan1	ENSMUST00000047111.13|Pklr|ENSMUSG00000041237.13|pyruvate kinase liver and red blood cell
mm39_v1_chr15_+_101308935_101308995	1.10722	Zkscan1	ENSMUST00000147662.8|Krt7|ENSMUSG00000023039.18|keratin 7
mm39_v1_chr2_+_172235820_172235884	1.0806	Zkscan1	ENSMUST00000109136.3|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4	ENSMUST00000228775.2|Cass4|ENSMUSG00000074570.15|Cas scaffolding protein family member 4
mm39_v1_chr2_+_31135813_31135913	1.07738	Zkscan1	ENSMUST00000000199.8|Ncs1|ENSMUSG00000062661.7|neuronal calcium sensor 1
mm39_v1_chr18_+_61238908_61238959	1.0278	Zkscan1	ENSMUST00000115268.4|Csf1r|ENSMUSG00000024621.17|colony stimulating factor 1 receptor
mm39_v1_chr5_+_64969679_64969727	1.01294	Zkscan1	ENSMUST00000166409.6|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)	ENSMUST00000197879.2|Klf3|ENSMUSG00000029178.15|Kruppel-like factor 3 (basic)
mm39_v1_chr2_+_90507552_90507580	1.00769	Zkscan1	ENSMUST00000057481.7|Nup160|ENSMUSG00000051329.14|nucleoporin 160
mm39_v1_chr12_+_116369017_116369083	0.988815	Zkscan1	ENSMUST00000084828.5|Ncapg2|ENSMUSG00000042029.8|non-SMC condensin II complex, subunit G2	ENSMUST00000222469.2|Ncapg2|ENSMUSG00000042029.8|non-SMC condensin II complex, subunit G2	ENSMUST00000221114.2|Ncapg2|ENSMUSG00000042029.8|non-SMC condensin II complex, subunit G2	ENSMUST00000221970.2|Ncapg2|ENSMUSG00000042029.8|non-SMC condensin II complex, subunit G2
mm39_v1_chr1_+_171668173_171668208	0.921483	Zkscan1	ENSMUST00000136479.8|Cd84|ENSMUSG00000038147.15|CD84 antigen
mm39_v1_chr8_-_70980584_70980633	0.897329	Zkscan1	ENSMUST00000138260.8|Kxd1|ENSMUSG00000055553.17|KxDL motif containing 1	ENSMUST00000117580.8|Kxd1|ENSMUSG00000055553.17|KxDL motif containing 1
mm39_v1_chr2_+_112092271_112092319	0.889922	Zkscan1	ENSMUST00000028553.4|Nop10|ENSMUSG00000027133.4|NOP10 ribonucleoprotein
mm39_v1_chr14_-_52553764_52553781	0.815314	Zkscan1	ENSMUST00000135523.5|Sall2|ENSMUSG00000049532.12|spalt like transcription factor 2
mm39_v1_chr4_-_63414188_63414270	0.805264	Zkscan1	ENSMUST00000063650.10|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000102867.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000107393.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000084510.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000095038.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000119294.8|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000095037.2|Whrn|ENSMUSG00000039137.19|whirlin	ENSMUST00000063672.10|Whrn|ENSMUSG00000039137.19|whirlin
mm39_v1_chr5_+_125518609_125518678	0.798701	Zkscan1	ENSMUST00000049040.14|Bri3bp|ENSMUSG00000037905.14|Bri3 binding protein
mm39_v1_chr19_+_41818409_41818487	0.754979	Zkscan1	ENSMUST00000087155.5|Frat1|ENSMUSG00000067199.5|frequently rearranged in advanced T cell lymphomas
mm39_v1_chr8_+_4303067_4303140	0.680735	Zkscan1	ENSMUST00000011981.5|Snapc2|ENSMUSG00000011837.5|small nuclear RNA activating complex, polypeptide 2	ENSMUST00000208316.2|Snapc2|ENSMUSG00000011837.5|small nuclear RNA activating complex, polypeptide 2
mm39_v1_chr11_+_23234644_23234669	0.663797	Zkscan1	ENSMUST00000150750.3|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr2_+_118730823_118730878	0.630923	Zkscan1	ENSMUST00000151162.2|Bahd1|ENSMUSG00000040007.9|bromo adjacent homology domain containing 1
mm39_v1_chrX_+_163156359_163156374	0.626815	Zkscan1	ENSMUST00000033751.8|Vegfd|ENSMUSG00000031380.11|vascular endothelial growth factor D
mm39_v1_chr4_+_141171965_141172025	0.62452	Zkscan1	ENSMUST00000006377.13|Zbtb17|ENSMUSG00000006215.13|zinc finger and BTB domain containing 17
mm39_v1_chr10_+_79889322_79889404	0.589111	Zkscan1	ENSMUST00000105372.9|Gpx4|ENSMUSG00000075706.12|glutathione peroxidase 4
mm39_v1_chr13_-_56283331_56283444	0.582417	Zkscan1	ENSMUST00000045788.9|Macroh2a1|ENSMUSG00000015937.16|macroH2A.1 histone	ENSMUST00000016081.13|Macroh2a1|ENSMUSG00000015937.16|macroH2A.1 histone
mm39_v1_chr19_+_44321531_44321531	0.567555	Zkscan1	ENSMUST00000058856.9|Scd4|ENSMUSG00000050195.9|stearoyl-coenzyme A desaturase 4
mm39_v1_chr6_-_122317457_122317471	0.555396	Zkscan1	ENSMUST00000160843.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr11_+_53992054_53992085	0.55332	Zkscan1	ENSMUST00000135653.8|P4ha2|ENSMUSG00000018906.15|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
mm39_v1_chrX_+_158155171_158155285	0.488522	Zkscan1	ENSMUST00000087143.7|Eif1ax|ENSMUSG00000067194.7|eukaryotic translation initiation factor 1A, X-linked
mm39_v1_chr5_-_134668152_134668344	0.482537	Zkscan1	ENSMUST00000036125.10|Eif4h|ENSMUSG00000040731.14|eukaryotic translation initiation factor 4H	ENSMUST00000202622.4|Eif4h|ENSMUSG00000040731.14|eukaryotic translation initiation factor 4H
mm39_v1_chr11_-_78056347_78056415	0.47503	Zkscan1	ENSMUST00000017530.4|Traf4|ENSMUSG00000017386.11|TNF receptor associated factor 4
mm39_v1_chr4_+_132948121_132948181	0.462179	Zkscan1	ENSMUST00000105910.2|Cd164l2|ENSMUSG00000028865.15|CD164 sialomucin-like 2
mm39_v1_chr1_-_93563406_93563444	0.449246	Zkscan1	ENSMUST00000027498.14|Stk25|ENSMUSG00000026277.15|serine/threonine kinase 25 (yeast)
mm39_v1_chr19_+_10914517_10914542	0.445689	Zkscan1	ENSMUST00000037261.4|Ptgdr2|ENSMUSG00000034117.4|prostaglandin D2 receptor 2
mm39_v1_chr4_+_101276474_101276547	0.444291	Zkscan1	ENSMUST00000102780.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106946.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4	ENSMUST00000106945.8|Ak4|ENSMUSG00000028527.19|adenylate kinase 4
mm39_v1_chr1_-_93563201_93563356	0.399338	Zkscan1	ENSMUST00000133769.8|Stk25|ENSMUSG00000026277.15|serine/threonine kinase 25 (yeast)
mm39_v1_chr11_-_78402931_78402998	0.368809	Zkscan1	ENSMUST00000052566.8|Tmem199|ENSMUSG00000051232.14|transmembrane protein 199
mm39_v1_chr15_-_74869684_74869880	0.346403	Zkscan1	ENSMUST00000190188.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000189068.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000186526.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187171.2|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A	ENSMUST00000187994.7|Ly6a|ENSMUSG00000075602.11|lymphocyte antigen 6 complex, locus A
mm39_v1_chr7_-_118091135_118091198	0.346204	Zkscan1	ENSMUST00000178344.3|Itpripl2|ENSMUSG00000095115.3|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm39_v1_chr5_-_131567526_131567557	0.322248	Zkscan1	ENSMUST00000161374.8|Auts2|ENSMUSG00000029673.20|autism susceptibility candidate 2
mm39_v1_chr9_+_118881926_118881965	0.30758	Zkscan1	ENSMUST00000131647.2|Vill|ENSMUSG00000038775.15|villin-like
mm39_v1_chr10_-_38998272_38998310	0.30618	Zkscan1	ENSMUST00000136546.8|Fam229b|ENSMUSG00000051736.9|family with sequence similarity 229, member B
mm39_v1_chr6_+_57234937_57234937	0.299755	Zkscan1	ENSMUST00000228297.2|Vmn1r15|ENSMUSG00000115199.2|vomeronasal 1 receptor 15
mm39_v1_chr14_-_40728839_40728933	0.284638	Zkscan1	ENSMUST00000152837.2|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A	ENSMUST00000134715.8|Prxl2a|ENSMUSG00000021792.16|peroxiredoxin like 2A
mm39_v1_chr7_-_28661648_28661674	0.283796	Zkscan1	ENSMUST00000127210.8|Actn4|ENSMUSG00000054808.16|actinin alpha 4
mm39_v1_chr15_-_82505132_82505147	0.263006	Zkscan1	ENSMUST00000109515.3|Cyp2d34|ENSMUSG00000094559.3|cytochrome P450, family 2, subfamily d, polypeptide 34
mm39_v1_chr15_-_79048674_79048696	0.261165	Zkscan1	ENSMUST00000230261.2|Sox10|ENSMUSG00000033006.11|SRY (sex determining region Y)-box 10	ENSMUST00000040019.5|Sox10|ENSMUSG00000033006.11|SRY (sex determining region Y)-box 10
mm39_v1_chr18_-_52662917_52662989	0.257098	Zkscan1	ENSMUST00000171470.8|Lox|ENSMUSG00000024529.15|lysyl oxidase
mm39_v1_chr10_+_90665270_90665343	0.245661	Zkscan1	ENSMUST00000182202.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B	ENSMUST00000182966.8|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr17_+_34258411_34258455	0.241412	Zkscan1	ENSMUST00000087497.11|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000131134.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000235819.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114255.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000114252.9|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2	ENSMUST00000237989.2|Col11a2|ENSMUSG00000024330.18|collagen, type XI, alpha 2
mm39_v1_chr9_+_98305014_98305014	0.241085	Zkscan1	ENSMUST00000052068.11|Rbp1|ENSMUSG00000046402.11|retinol binding protein 1, cellular
mm39_v1_chr7_-_28661751_28661765	0.225156	Zkscan1	ENSMUST00000068045.14|Actn4|ENSMUSG00000054808.16|actinin alpha 4	ENSMUST00000217157.2|Actn4|ENSMUSG00000054808.16|actinin alpha 4
mm39_v1_chr10_+_90665639_90665653	0.223879	Zkscan1	ENSMUST00000179337.9|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr4_+_109263820_109263961	0.2168	Zkscan1	ENSMUST00000124209.8|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A
mm39_v1_chr2_-_91795910_91795945	0.202967	Zkscan1	ENSMUST00000239257.2|Dgkz|ENSMUSG00000040479.13|diacylglycerol kinase zeta
mm39_v1_chr2_-_127571836_127571856	0.190443	Zkscan1	ENSMUST00000028856.3|Mall|ENSMUSG00000027377.3|mal, T cell differentiation protein-like
mm39_v1_chr19_-_53932581_53932659	0.174748	Zkscan1	ENSMUST00000236885.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000236098.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000236370.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1
mm39_v1_chr4_-_97472844_97472880	0.173358	Zkscan1	ENSMUST00000107067.8|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene	ENSMUST00000107068.9|E130114P18Rik|ENSMUSG00000048747.15|RIKEN cDNA E130114P18 gene
mm39_v1_chr15_+_16778187_16778187	0.1694	Zkscan1	ENSMUST00000026432.8|Cdh9|ENSMUSG00000025370.8|cadherin 9
mm39_v1_chr4_+_103476777_103476862	0.164676	Zkscan1	ENSMUST00000106827.8|Dab1|ENSMUSG00000028519.17|disabled 1
mm39_v1_chr6_+_83055321_83055371	0.161527	Zkscan1	ENSMUST00000165164.9|Pcgf1|ENSMUSG00000069678.11|polycomb group ring finger 1	ENSMUST00000092614.9|Pcgf1|ENSMUSG00000069678.11|polycomb group ring finger 1
mm39_v1_chr9_+_106245792_106245839	0.159603	Zkscan1	ENSMUST00000172306.3|Dusp7|ENSMUSG00000053716.10|dual specificity phosphatase 7
mm39_v1_chr1_+_90531183_90531250	0.157979	Zkscan1	ENSMUST00000186750.2|Cops8|ENSMUSG00000034432.12|COP9 signalosome subunit 8
mm39_v1_chr15_-_34356567_34356567	0.151257	Zkscan1	ENSMUST00000179647.2|9430069I07Rik|ENSMUSG00000094447.3|RIKEN cDNA 9430069I07 gene
mm39_v1_chr10_+_90665399_90665428	0.148727	Zkscan1	ENSMUST00000179694.9|Anks1b|ENSMUSG00000058589.15|ankyrin repeat and sterile alpha motif domain containing 1B
mm39_v1_chr11_+_120348919_120348973	0.139444	Zkscan1	ENSMUST00000058370.14|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000175970.8|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000176120.2|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137
mm39_v1_chrX_-_103244703_103244724	0.129634	Zkscan1	ENSMUST00000087879.11|Nexmif|ENSMUSG00000046449.16|neurite extension and migration factor
mm39_v1_chr2_-_73410632_73410697	0.123768	Zkscan1	ENSMUST00000028515.4|Chrna1|ENSMUSG00000027107.4|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm39_v1_chr19_-_53932867_53932919	0.117201	Zkscan1	ENSMUST00000235688.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1	ENSMUST00000235348.2|Bbip1|ENSMUSG00000084957.4|BBSome interacting protein 1
mm39_v1_chr11_-_78313043_78313066	0.108354	Zkscan1	ENSMUST00000001122.6|Slc13a2|ENSMUSG00000001095.6|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
mm39_v1_chr17_+_5045178_5045349	0.107695	Zkscan1	ENSMUST00000092723.11|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)	ENSMUST00000232180.2|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)	ENSMUST00000115797.9|Arid1b|ENSMUSG00000069729.15|AT rich interactive domain 1B (SWI-like)
mm39_v1_chr16_-_10265204_10265233	0.104045	Zkscan1	ENSMUST00000051118.7|Tvp23a|ENSMUSG00000050908.13|trans-golgi network vesicle protein 23A
mm39_v1_chr8_-_4375320_4375413	0.0999845	Zkscan1	ENSMUST00000098950.6|Elavl1|ENSMUSG00000040028.11|ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
mm39_v1_chr4_+_73931679_73931931	0.0916819	Zkscan1	ENSMUST00000098006.9|Frmd3|ENSMUSG00000049122.18|FERM domain containing 3	ENSMUST00000084474.6|Frmd3|ENSMUSG00000049122.18|FERM domain containing 3
mm39_v1_chr19_+_41471395_41471468	0.0881175	Zkscan1	ENSMUST00000237208.2|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor	ENSMUST00000238398.2|Lcor|ENSMUSG00000025019.18|ligand dependent nuclear receptor corepressor
mm39_v1_chr12_+_112586501_112586527	0.0821087	Zkscan1	ENSMUST00000180015.9|Adssl1|ENSMUSG00000011148.15|adenylosuccinate synthetase like 1
mm39_v1_chr2_+_153742294_153742315	0.0745025	Zkscan1	ENSMUST00000088955.12|Bpifb6|ENSMUSG00000068009.12|BPI fold containing family B, member 6	ENSMUST00000135501.3|Bpifb6|ENSMUSG00000068009.12|BPI fold containing family B, member 6
mm39_v1_chr6_+_90246088_90246088	0.0726978	Zkscan1	ENSMUST00000058039.3|Vmn1r54|ENSMUSG00000047203.4|vomeronasal 1 receptor 54
mm39_v1_chr19_+_43678109_43678133	0.0658741	Zkscan1	ENSMUST00000081079.6|Entpd7|ENSMUSG00000025192.14|ectonucleoside triphosphate diphosphohydrolase 7
mm39_v1_chr6_+_134012602_134012683	0.0620907	Zkscan1	ENSMUST00000081028.13|Etv6|ENSMUSG00000030199.17|ets variant 6	ENSMUST00000111963.8|Etv6|ENSMUSG00000030199.17|ets variant 6
mm39_v1_chr4_+_126156118_126156173	0.0557571	Zkscan1	ENSMUST00000030660.9|Trappc3|ENSMUSG00000028847.9|trafficking protein particle complex 3
mm39_v1_chr11_+_42310557_42310612	0.0509635	Zkscan1	ENSMUST00000007797.10|Gabrb2|ENSMUSG00000007653.13|gamma-aminobutyric acid (GABA) A receptor, subunit beta 2
mm39_v1_chr14_+_34395845_34395890	0.0431064	Zkscan1	ENSMUST00000048263.14|Wapl|ENSMUSG00000041408.19|WAPL cohesin release factor
mm39_v1_chr19_+_5138562_5138603	0.0376422	Zkscan1	ENSMUST00000238093.2|Yif1a|ENSMUSG00000024875.6|Yip1 interacting factor homolog A (S. cerevisiae)	ENSMUST00000025811.6|Yif1a|ENSMUSG00000024875.6|Yip1 interacting factor homolog A (S. cerevisiae)	ENSMUST00000237025.2|Yif1a|ENSMUSG00000024875.6|Yip1 interacting factor homolog A (S. cerevisiae)
mm39_v1_chrX_-_103244784_103244810	0.0288781	Zkscan1	ENSMUST00000118314.8|Nexmif|ENSMUSG00000046449.16|neurite extension and migration factor
mm39_v1_chr17_+_47604995_47604995	0.0278477	Zkscan1	ENSMUST00000190020.4|Trerf1|ENSMUSG00000064043.16|transcriptional regulating factor 1
mm39_v1_chr10_+_94350687_94350784	0.0188319	Zkscan1	ENSMUST00000065060.12|Tmcc3|ENSMUSG00000020023.19|transmembrane and coiled coil domains 3
