mm39_v1_chr9_+_98372575_98372590	5.27724	Nkx2-1	ENSMUST00000035029.3|Rbp2|ENSMUSG00000032454.10|retinol binding protein 2, cellular
mm39_v1_chr7_-_4755971_4756093	3.61316	Nkx2-1	ENSMUST00000183971.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182173.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182738.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182111.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000184143.8|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000182048.2|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2	ENSMUST00000063324.14|Cox6b2|ENSMUSG00000051811.15|cytochrome c oxidase subunit 6B2
mm39_v1_chr11_+_117740077_117740108	3.25758	Nkx2-1	ENSMUST00000081387.11|Birc5|ENSMUSG00000017716.16|baculoviral IAP repeat-containing 5
mm39_v1_chr10_+_75404482_75404508	2.95534	Nkx2-1	ENSMUST00000134503.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1	ENSMUST00000125770.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1	ENSMUST00000128886.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1	ENSMUST00000151212.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1
mm39_v1_chr9_+_56344700_56344741	2.95042	Nkx2-1	ENSMUST00000239472.2|ENSMUSG00000118653.2|ENSMUSG00000118653.2|ubiquitin-conjugating enzyme E2S (Ube2s) retrogene
mm39_v1_chr11_+_117740111_117740196	2.36491	Nkx2-1	ENSMUST00000093906.5|Birc5|ENSMUSG00000017716.16|baculoviral IAP repeat-containing 5
mm39_v1_chr9_-_44253630_44253678	2.29912	Nkx2-1	ENSMUST00000097558.5|Hmbs|ENSMUSG00000032126.17|hydroxymethylbilane synthase
mm39_v1_chr10_+_75404464_75404481	2.17518	Nkx2-1	ENSMUST00000145928.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1	ENSMUST00000131565.8|Ggt1|ENSMUSG00000006345.11|gamma-glutamyltransferase 1
mm39_v1_chr9_+_55997246_55997291	2.02713	Nkx2-1	ENSMUST00000059206.8|Pstpip1|ENSMUSG00000032322.15|proline-serine-threonine phosphatase-interacting protein 1
mm39_v1_chr10_+_81012465_81012485	2.00106	Nkx2-1	ENSMUST00000047864.11|Eef2|ENSMUSG00000034994.11|eukaryotic translation elongation factor 2
mm39_v1_chr18_-_68562385_68562392	1.75876	Nkx2-1	ENSMUST00000052347.8|Mc2r|ENSMUSG00000045569.8|melanocortin 2 receptor
mm39_v1_chr1_-_181669891_181669949	1.68847	Nkx2-1	ENSMUST00000193028.2|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000191878.6|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000005003.12|Lbr|ENSMUSG00000004880.12|lamin B receptor
mm39_v1_chrX_-_74174524_74174600	1.55578	Nkx2-1	ENSMUST00000114091.8|Mpp1|ENSMUSG00000031402.13|membrane protein, palmitoylated
mm39_v1_chr11_+_68989763_68989811	1.4204	Nkx2-1	ENSMUST00000021271.14|Per1|ENSMUSG00000020893.18|period circadian clock 1
mm39_v1_chr1_+_74193138_74193162	1.40416	Nkx2-1	ENSMUST00000027372.8|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2	ENSMUST00000106899.4|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2
mm39_v1_chr2_-_156848923_156849074	1.3298	Nkx2-1	ENSMUST00000146413.8|Dsn1|ENSMUSG00000027635.16|DSN1 homolog, MIS12 kinetochore complex component	ENSMUST00000103129.9|Dsn1|ENSMUSG00000027635.16|DSN1 homolog, MIS12 kinetochore complex component	ENSMUST00000103130.8|Dsn1|ENSMUSG00000027635.16|DSN1 homolog, MIS12 kinetochore complex component
mm39_v1_chr16_-_4340920_4340939	1.29255	Nkx2-1	ENSMUST00000090500.10|Srl|ENSMUSG00000022519.15|sarcalumenin	ENSMUST00000023161.8|Srl|ENSMUSG00000022519.15|sarcalumenin
mm39_v1_chr5_-_148988110_148988126	1.27408	Nkx2-1	ENSMUST00000110505.8|Hmgb1|ENSMUSG00000066551.13|high mobility group box 1
mm39_v1_chr11_+_70323452_70323533	1.26667	Nkx2-1	ENSMUST00000084954.13|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000108568.10|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000079056.9|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102564.11|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000124943.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000150076.8|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2	ENSMUST00000102563.2|Arrb2|ENSMUSG00000060216.16|arrestin, beta 2
mm39_v1_chr1_-_120432669_120432753	1.26595	Nkx2-1	ENSMUST00000027639.8|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr19_-_32443978_32443978	1.26505	Nkx2-1	ENSMUST00000078034.5|Rpl9-ps6|ENSMUSG00000062456.5|ribosomal protein L9, pseudogene 6
mm39_v1_chr11_-_96868483_96868537	1.17975	Nkx2-1	ENSMUST00000107624.8|Sp2|ENSMUSG00000018678.14|Sp2 transcription factor
mm39_v1_chr2_+_121337226_121337273	1.16988	Nkx2-1	ENSMUST00000099473.10|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76	ENSMUST00000110602.9|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr9_-_45923908_45923993	1.13596	Nkx2-1	ENSMUST00000217514.2|Pafah1b2|ENSMUSG00000003131.8|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm39_v1_chr13_+_23922783_23922798	1.10897	Nkx2-1	ENSMUST00000040914.3|H1f2|ENSMUSG00000036181.3|H1.2 linker histone, cluster member
mm39_v1_chr12_+_30961650_30961732	1.05986	Nkx2-1	ENSMUST00000020997.15|Sh3yl1|ENSMUSG00000020669.16|Sh3 domain YSC-like 1	ENSMUST00000110880.3|Sh3yl1|ENSMUSG00000020669.16|Sh3 domain YSC-like 1
mm39_v1_chr17_+_47983587_47983645	1.0146	Nkx2-1	ENSMUST00000152724.2|Usp49|ENSMUSG00000090115.8|ubiquitin specific peptidase 49
mm39_v1_chr11_+_32483290_32483338	0.971064	Nkx2-1	ENSMUST00000102821.4|Stk10|ENSMUSG00000020272.9|serine/threonine kinase 10
mm39_v1_chr7_+_127845984_127846120	0.91877	Nkx2-1	ENSMUST00000164710.8|Tgfb1i1|ENSMUSG00000030782.18|transforming growth factor beta 1 induced transcript 1	ENSMUST00000070656.12|Tgfb1i1|ENSMUSG00000030782.18|transforming growth factor beta 1 induced transcript 1
mm39_v1_chr12_-_30961570_30961624	0.917511	Nkx2-1	ENSMUST00000062740.15|Acp1|ENSMUSG00000044573.17|acid phosphatase 1, soluble	ENSMUST00000074038.7|Acp1|ENSMUSG00000044573.17|acid phosphatase 1, soluble
mm39_v1_chr2_-_170248421_170248438	0.900264	Nkx2-1	ENSMUST00000154650.8|Bcas1|ENSMUSG00000013523.14|breast carcinoma amplified sequence 1
mm39_v1_chr1_+_12788720_12788753	0.897692	Nkx2-1	ENSMUST00000088585.10|Sulf1|ENSMUSG00000016918.16|sulfatase 1
mm39_v1_chr15_-_64254754_64254784	0.85814	Nkx2-1	ENSMUST00000177374.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000110114.10|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000110115.9|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000023008.16|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr15_+_66542598_66542603	0.83789	Nkx2-1	ENSMUST00000065916.14|Tg|ENSMUSG00000053469.15|thyroglobulin
mm39_v1_chr5_-_110927803_110927833	0.786044	Nkx2-1	ENSMUST00000112426.8|Pus1|ENSMUSG00000029507.17|pseudouridine synthase 1
mm39_v1_chr10_+_22520910_22521008	0.765943	Nkx2-1	ENSMUST00000042261.5|Slc2a12|ENSMUSG00000037490.6|solute carrier family 2 (facilitated glucose transporter), member 12
mm39_v1_chr8_+_55024446_55024504	0.754707	Nkx2-1	ENSMUST00000239166.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5	ENSMUST00000239106.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5	ENSMUST00000239152.2|Asb5|ENSMUSG00000031519.5|ankyrin repeat and SOCs box-containing 5
mm39_v1_chr2_+_121337195_121337215	0.677976	Nkx2-1	ENSMUST00000028676.12|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr11_-_86148344_86148376	0.648643	Nkx2-1	ENSMUST00000136469.2|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2	ENSMUST00000018212.13|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2
mm39_v1_chr3_+_37474422_37474484	0.615107	Nkx2-1	ENSMUST00000029277.13|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5	ENSMUST00000198968.2|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5
mm39_v1_chr4_-_109522502_109522569	0.601607	Nkx2-1	ENSMUST00000063531.5|Cdkn2c|ENSMUSG00000028551.15|cyclin dependent kinase inhibitor 2C
mm39_v1_chr2_-_121337120_121337151	0.595442	Nkx2-1	ENSMUST00000089926.6|Mfap1a|ENSMUSG00000068479.6|microfibrillar-associated protein 1A
mm39_v1_chr9_-_71803354_71803393	0.594151	Nkx2-1	ENSMUST00000184448.8|Tcf12|ENSMUSG00000032228.17|transcription factor 12
mm39_v1_chr15_-_64254585_64254694	0.568438	Nkx2-1	ENSMUST00000176384.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1	ENSMUST00000175799.8|Asap1|ENSMUSG00000022377.17|ArfGAP with SH3 domain, ankyrin repeat and PH domain1
mm39_v1_chr1_-_120432477_120432497	0.559025	Nkx2-1	ENSMUST00000186432.3|Marco|ENSMUSG00000026390.8|macrophage receptor with collagenous structure
mm39_v1_chr7_-_118091135_118091198	0.541954	Nkx2-1	ENSMUST00000178344.3|Itpripl2|ENSMUSG00000095115.3|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm39_v1_chr9_-_121621544_121621573	0.530878	Nkx2-1	ENSMUST00000035110.11|Hhatl|ENSMUSG00000032523.12|hedgehog acyltransferase-like
mm39_v1_chrX_-_73009933_73009982	0.528514	Nkx2-1	ENSMUST00000114372.3|Hcfc1|ENSMUSG00000031386.15|host cell factor C1	ENSMUST00000033761.13|Hcfc1|ENSMUSG00000031386.15|host cell factor C1
mm39_v1_chr6_+_72281587_72281604	0.526325	Nkx2-1	ENSMUST00000183018.8|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B	ENSMUST00000182014.10|Sftpb|ENSMUSG00000056370.18|surfactant associated protein B
mm39_v1_chr2_-_121304521_121304548	0.512509	Nkx2-1	ENSMUST00000056732.4|Mfap1b|ENSMUSG00000048222.4|microfibrillar-associated protein 1B
mm39_v1_chr13_+_55782814_55782864	0.51001	Nkx2-1	ENSMUST00000172272.8|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000099479.4|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46	ENSMUST00000223736.2|Ddx46|ENSMUSG00000021500.18|DEAD box helicase 46
mm39_v1_chr6_-_38276157_38276225	0.481516	Nkx2-1	ENSMUST00000058524.3|Zc3hav1l|ENSMUSG00000047749.3|zinc finger CCCH-type, antiviral 1-like
mm39_v1_chr4_-_141602190_141602264	0.479693	Nkx2-1	ENSMUST00000036854.4|Efhd2|ENSMUSG00000040659.4|EF hand domain containing 2
mm39_v1_chr6_-_41613322_41613343	0.475842	Nkx2-1	ENSMUST00000031902.7|Trpv6|ENSMUSG00000029868.15|transient receptor potential cation channel, subfamily V, member 6
mm39_v1_chr3_+_159545309_159545390	0.473253	Nkx2-1	ENSMUST00000068952.10|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator	ENSMUST00000198878.2|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator
mm39_v1_chr3_-_108108113_108108175	0.443186	Nkx2-1	ENSMUST00000106655.2|Cyb561d1|ENSMUSG00000048796.8|cytochrome b-561 domain containing 1	ENSMUST00000065664.7|Cyb561d1|ENSMUSG00000048796.8|cytochrome b-561 domain containing 1
mm39_v1_chr19_-_5452521_5452556	0.432829	Nkx2-1	ENSMUST00000235569.2|Tsga10ip|ENSMUSG00000039330.6|testis specific 10 interacting protein
mm39_v1_chr6_-_113411489_113411574	0.424369	Nkx2-1	ENSMUST00000133348.2|Cidec|ENSMUSG00000030278.12|cell death-inducing DFFA-like effector c
mm39_v1_chr11_-_83353787_83353897	0.411318	Nkx2-1	ENSMUST00000021020.13|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000119346.2|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000103209.10|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)	ENSMUST00000108137.9|Mmp28|ENSMUSG00000020682.18|matrix metallopeptidase 28 (epilysin)
mm39_v1_chr5_+_145020640_145020725	0.408439	Nkx2-1	ENSMUST00000031625.15|Arpc1a|ENSMUSG00000029621.15|actin related protein 2/3 complex, subunit 1A
mm39_v1_chr12_-_111638722_111638772	0.405843	Nkx2-1	ENSMUST00000001304.9|Ckb|ENSMUSG00000001270.10|creatine kinase, brain
mm39_v1_chr10_+_87926932_87926939	0.394162	Nkx2-1	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr14_+_51351880_51351895	0.38825	Nkx2-1	ENSMUST00000100645.5|Eddm3b|ENSMUSG00000072575.5|epididymal protein 3B
mm39_v1_chr9_+_110595224_110595310	0.385803	Nkx2-1	ENSMUST00000136695.3|Myl3|ENSMUSG00000059741.14|myosin, light polypeptide 3
mm39_v1_chr6_+_127554931_127554943	0.380117	Nkx2-1	ENSMUST00000071563.5|Cracr2a|ENSMUSG00000061414.9|calcium release activated channel regulator 2A
mm39_v1_chr4_+_129948803_129948840	0.376961	Nkx2-1	ENSMUST00000123617.8|Col16a1|ENSMUSG00000040690.16|collagen, type XVI, alpha 1
mm39_v1_chr6_-_148847854_148847995	0.346129	Nkx2-1	ENSMUST00000139355.8|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000146457.2|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor	ENSMUST00000054080.15|Sinhcaf|ENSMUSG00000039985.15|SIN3-HDAC complex associated factor
mm39_v1_chrX_+_72935708_72935720	0.335743	Nkx2-1	ENSMUST00000033765.8|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2	ENSMUST00000101470.3|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2	ENSMUST00000114395.2|Avpr2|ENSMUSG00000031390.9|arginine vasopressin receptor 2
mm39_v1_chrX_+_143471903_143471903	0.316133	Nkx2-1	ENSMUST00000112843.2|Rtl4|ENSMUSG00000071679.5|retrotransposon Gag like 4
mm39_v1_chr17_-_26080429_26080484	0.304636	Nkx2-1	ENSMUST00000079461.15|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90	ENSMUST00000176923.9|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90
mm39_v1_chr11_+_100513747_100513837	0.30325	Nkx2-1	ENSMUST00000142993.2|Nkiras2|ENSMUSG00000017837.13|NFKB inhibitor interacting Ras-like protein 2
mm39_v1_chrX_+_161543384_161543417	0.297222	Nkx2-1	ENSMUST00000033720.12|Rbbp7|ENSMUSG00000031353.14|retinoblastoma binding protein 7, chromatin remodeling factor	ENSMUST00000112327.8|Rbbp7|ENSMUSG00000031353.14|retinoblastoma binding protein 7, chromatin remodeling factor
mm39_v1_chr11_-_86148379_86148416	0.278981	Nkx2-1	ENSMUST00000132024.8|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2	ENSMUST00000139285.8|Ints2|ENSMUSG00000018068.14|integrator complex subunit 2
mm39_v1_chr18_+_49965689_49965752	0.275759	Nkx2-1	ENSMUST00000180611.8|Dmxl1|ENSMUSG00000037416.14|Dmx-like 1
mm39_v1_chr3_+_68491487_68491514	0.266667	Nkx2-1	ENSMUST00000182997.3|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr11_+_69920849_69920924	0.265852	Nkx2-1	ENSMUST00000143920.4|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr1_-_136273811_136273884	0.258243	Nkx2-1	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr17_+_34062059_34062104	0.256332	Nkx2-1	ENSMUST00000002379.15|Cd320|ENSMUSG00000002308.17|CD320 antigen
mm39_v1_chr15_-_10470575_10470613	0.25448	Nkx2-1	ENSMUST00000136591.8|Dnajc21|ENSMUSG00000044224.17|DnaJ heat shock protein family (Hsp40) member C21
mm39_v1_chr13_+_93441447_93441786	0.253076	Nkx2-1	ENSMUST00000109497.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109498.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000060490.11|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109492.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109496.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109495.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr15_+_76594810_76594931	0.252224	Nkx2-1	ENSMUST00000136840.8|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14	ENSMUST00000127208.8|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14	ENSMUST00000036423.15|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14	ENSMUST00000137649.8|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14	ENSMUST00000155225.2|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14	ENSMUST00000155735.2|Lrrc14|ENSMUSG00000033728.15|leucine rich repeat containing 14
mm39_v1_chr15_-_76419131_76419155	0.241193	Nkx2-1	ENSMUST00000230604.2|Tmem249|ENSMUSG00000116376.2|transmembrane protein 249
mm39_v1_chrX_-_100463810_100463970	0.22944	Nkx2-1	ENSMUST00000118092.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000119699.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3
mm39_v1_chr1_+_85945790_85945806	0.226833	Nkx2-1	ENSMUST00000149469.3|Spata3|ENSMUSG00000026226.17|spermatogenesis associated 3
mm39_v1_chrX_+_161543423_161543484	0.222809	Nkx2-1	ENSMUST00000112326.8|Rbbp7|ENSMUSG00000031353.14|retinoblastoma binding protein 7, chromatin remodeling factor
mm39_v1_chr11_+_69920956_69920981	0.211634	Nkx2-1	ENSMUST00000232115.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chrX_-_110372843_110372892	0.209432	Nkx2-1	ENSMUST00000096348.10|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6	ENSMUST00000113428.9|Rps6ka6|ENSMUSG00000025665.17|ribosomal protein S6 kinase polypeptide 6
mm39_v1_chr19_-_8816530_8816632	0.207238	Nkx2-1	ENSMUST00000096259.6|Gng3|ENSMUSG00000071658.6|guanine nucleotide binding protein (G protein), gamma 3
mm39_v1_chr4_-_9643636_9643717	0.188771	Nkx2-1	ENSMUST00000108333.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108334.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000108335.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000152526.8|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase	ENSMUST00000103004.10|Asph|ENSMUSG00000028207.19|aspartate-beta-hydroxylase
mm39_v1_chr6_-_98319684_98319715	0.183185	Nkx2-1	ENSMUST00000164491.3|Mdfic2|ENSMUSG00000090667.3|MyoD family inhibitor domain containing 2
mm39_v1_chr12_+_91367764_91367796	0.1783	Nkx2-1	ENSMUST00000021346.14|Tshr|ENSMUSG00000020963.16|thyroid stimulating hormone receptor	ENSMUST00000021343.8|Tshr|ENSMUSG00000020963.16|thyroid stimulating hormone receptor
mm39_v1_chr1_-_173363523_173363579	0.169906	Nkx2-1	ENSMUST00000139092.8|Ifi214|ENSMUSG00000070501.15|interferon activated gene 214
mm39_v1_chr3_+_88439616_88439703	0.16835	Nkx2-1	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
mm39_v1_chr2_-_89779008_89779008	0.163919	Nkx2-1	ENSMUST00000214846.2|Olfr1259|ENSMUSG00000068806.6|olfactory receptor 1259
mm39_v1_chr12_-_11200306_11200374	0.163114	Nkx2-1	ENSMUST00000055673.2|Kcns3|ENSMUSG00000043673.12|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3
mm39_v1_chr11_+_69920542_69920663	0.157954	Nkx2-1	ENSMUST00000232266.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000132597.5|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr1_-_54233207_54233207	0.15746	Nkx2-1	ENSMUST00000120904.8|Hecw2|ENSMUSG00000042807.16|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
mm39_v1_chrX_+_56008685_56008685	0.156117	Nkx2-1	ENSMUST00000096431.10|Adgrg4|ENSMUSG00000053852.12|adhesion G protein-coupled receptor G4
mm39_v1_chr7_-_28824440_28824585	0.14735	Nkx2-1	ENSMUST00000214374.2|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle	ENSMUST00000179893.9|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle	ENSMUST00000032813.10|Ryr1|ENSMUSG00000030592.19|ryanodine receptor 1, skeletal muscle
mm39_v1_chr13_+_110039620_110039645	0.145598	Nkx2-1	ENSMUST00000120664.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr17_+_69071546_69071546	0.144465	Nkx2-1	ENSMUST00000233625.2|L3mbtl4|ENSMUSG00000041565.18|L3MBTL4 histone methyl-lysine binding protein
mm39_v1_chr2_-_157988303_157988356	0.138825	Nkx2-1	ENSMUST00000103122.10|Tgm2|ENSMUSG00000037820.16|transglutaminase 2, C polypeptide
mm39_v1_chr15_+_98532624_98532659	0.137853	Nkx2-1	ENSMUST00000003442.9|Cacnb3|ENSMUSG00000003352.15|calcium channel, voltage-dependent, beta 3 subunit
mm39_v1_chr2_-_120916316_120916327	0.135889	Nkx2-1	ENSMUST00000028721.8|Tgm5|ENSMUSG00000053675.9|transglutaminase 5
mm39_v1_chr12_-_84745388_84745605	0.129276	Nkx2-1	ENSMUST00000221905.2|Syndig1l|ENSMUSG00000071234.4|synapse differentiation inducing 1 like	ENSMUST00000222422.2|Syndig1l|ENSMUSG00000071234.4|synapse differentiation inducing 1 like	ENSMUST00000095550.4|Syndig1l|ENSMUSG00000071234.4|synapse differentiation inducing 1 like
mm39_v1_chr14_+_53007210_53007210	0.127364	Nkx2-1	ENSMUST00000178768.4|Trav7d-4|ENSMUSG00000094023.4|T cell receptor alpha variable 7D-4
mm39_v1_chr17_-_26204621_26204770	0.126842	Nkx2-1	ENSMUST00000041641.9|Capn15|ENSMUSG00000037326.11|calpain 15	ENSMUST00000212520.2|Capn15|ENSMUSG00000037326.11|calpain 15
mm39_v1_chrX_-_101950075_101950164	0.126455	Nkx2-1	ENSMUST00000120808.8|Dmrtc1a|ENSMUSG00000031323.9|DMRT-like family C1a	ENSMUST00000121197.8|Dmrtc1a|ENSMUSG00000031323.9|DMRT-like family C1a
mm39_v1_chrX_-_100463395_100463520	0.122633	Nkx2-1	ENSMUST00000117901.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000120201.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000117637.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000134005.2|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000121520.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3
mm39_v1_chr2_+_67276338_67276353	0.114373	Nkx2-1	ENSMUST00000239060.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000028410.4|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000112347.8|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000238878.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2
mm39_v1_chr15_+_80118269_80118372	0.10311	Nkx2-1	ENSMUST00000229138.2|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1	ENSMUST00000166030.2|Mief1|ENSMUSG00000022412.15|mitochondrial elongation factor 1
mm39_v1_chr6_-_41749300_41749300	0.0945503	Nkx2-1	ENSMUST00000050412.5|Olfr459|ENSMUSG00000045479.8|olfactory receptor 459
mm39_v1_chr6_-_40864428_40864428	0.0939589	Nkx2-1	ENSMUST00000031937.4|Moxd2|ENSMUSG00000029885.4|monooxygenase, DBH-like 2
mm39_v1_chr9_-_119812042_119812114	0.0916145	Nkx2-1	ENSMUST00000214058.2|Csrnp1|ENSMUSG00000032515.9|cysteine-serine-rich nuclear protein 1
mm39_v1_chr3_-_37180093_37180110	0.0805349	Nkx2-1	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr7_+_28392456_28392569	0.0801218	Nkx2-1	ENSMUST00000151227.2|Fbxo27|ENSMUSG00000037463.15|F-box protein 27	ENSMUST00000108281.8|Fbxo27|ENSMUSG00000037463.15|F-box protein 27
mm39_v1_chr16_+_17716480_17716523	0.0709178	Nkx2-1	ENSMUST00000055374.8|Tssk2|ENSMUSG00000045521.8|testis-specific serine kinase 2
mm39_v1_chr2_-_88937158_88937179	0.0637626	Nkx2-1	ENSMUST00000099806.3|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220	ENSMUST00000213288.2|Olfr1220|ENSMUSG00000101480.4|olfactory receptor 1220
mm39_v1_chr7_-_30443106_30443156	0.0461421	Nkx2-1	ENSMUST00000182634.8|Gapdhs|ENSMUSG00000061099.13|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
mm39_v1_chr13_-_34529157_34529257	0.0364189	Nkx2-1	ENSMUST00000040336.12|Slc22a23|ENSMUSG00000038267.16|solute carrier family 22, member 23
mm39_v1_chr6_-_52222776_52222806	0.0354247	Nkx2-1	ENSMUST00000048026.10|Hoxa11|ENSMUSG00000038210.11|homeobox A11
mm39_v1_chr4_+_45203914_45203931	0.0348216	Nkx2-1	ENSMUST00000107804.2|Frmpd1|ENSMUSG00000035615.13|FERM and PDZ domain containing 1
mm39_v1_chr2_-_57004933_57005050	0.0340884	Nkx2-1	ENSMUST00000028166.9|Nr4a2|ENSMUSG00000026826.14|nuclear receptor subfamily 4, group A, member 2
mm39_v1_chr14_-_70761507_70761524	0.0320532	Nkx2-1	ENSMUST00000022692.5|Sftpc|ENSMUSG00000022097.5|surfactant associated protein C
mm39_v1_chr7_-_45463701_45463745	0.026582	Nkx2-1	ENSMUST00000210898.2|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000107729.10|Cyth2|ENSMUSG00000003269.18|cytohesin 2	ENSMUST00000056820.13|Cyth2|ENSMUSG00000003269.18|cytohesin 2
mm39_v1_chr3_+_90201388_90201397	0.0263025	Nkx2-1	ENSMUST00000199607.5|Gatad2b|ENSMUSG00000042390.10|GATA zinc finger domain containing 2B
mm39_v1_chr6_-_125142539_125142577	0.0233463	Nkx2-1	ENSMUST00000183272.2|Gapdh|ENSMUSG00000057666.19|glyceraldehyde-3-phosphate dehydrogenase	ENSMUST00000182052.8|Gapdh|ENSMUSG00000057666.19|glyceraldehyde-3-phosphate dehydrogenase	ENSMUST00000182277.2|Gapdh|ENSMUSG00000057666.19|glyceraldehyde-3-phosphate dehydrogenase
mm39_v1_chr4_+_9269285_9269335	0.0185688	Nkx2-1	ENSMUST00000038841.14|Clvs1|ENSMUSG00000041216.16|clavesin 1
mm39_v1_chr14_+_40853734_40853751	0.00935237	Nkx2-1	ENSMUST00000022314.10|Sftpa1|ENSMUSG00000021789.15|surfactant associated protein A1	ENSMUST00000170719.2|Sftpa1|ENSMUSG00000021789.15|surfactant associated protein A1
mm39_v1_chr2_-_88963396_88963398	0.00541413	Nkx2-1	ENSMUST00000214027.2|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222	ENSMUST00000215816.3|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222
mm39_v1_chr6_+_113303929_113303974	0.00493416	Nkx2-1	ENSMUST00000032406.15|Ogg1|ENSMUSG00000030271.15|8-oxoguanine DNA-glycosylase 1
mm39_v1_chr7_+_34885782_34885833	0.00262155	Nkx2-1	ENSMUST00000135452.8|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	ENSMUST00000001854.12|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
