mm39_v1_chr18_-_38342815_38342839	2.94516	Hoxc13_Hoxd13	ENSMUST00000057185.13|Pcdh1|ENSMUSG00000051375.16|protocadherin 1
mm39_v1_chr4_-_141553306_141553471	2.33192	Hoxc13_Hoxd13	ENSMUST00000102481.4|Cela2a|ENSMUSG00000058579.6|chymotrypsin-like elastase family, member 2A
mm39_v1_chr17_-_31363245_31363262	2.30734	Hoxc13_Hoxd13	ENSMUST00000024826.8|Tff2|ENSMUSG00000024028.8|trefoil factor 2 (spasmolytic protein 1)
mm39_v1_chr5_-_66238313_66238442	2.0447	Hoxc13_Hoxd13	ENSMUST00000202700.4|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47	ENSMUST00000094757.9|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47	ENSMUST00000113724.6|Rbm47|ENSMUSG00000070780.12|RNA binding motif protein 47
mm39_v1_chr10_+_87695352_87695473	1.96029	Hoxc13_Hoxd13	ENSMUST00000121952.8|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1	ENSMUST00000126490.8|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr8_+_57004125_57004197	1.45895	Hoxc13_Hoxd13	ENSMUST00000110322.9|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000040218.13|Fbxo8|ENSMUSG00000038206.14|F-box protein 8	ENSMUST00000210863.2|Fbxo8|ENSMUSG00000038206.14|F-box protein 8
mm39_v1_chr9_-_51240201_51240229	1.29064	Hoxc13_Hoxd13	ENSMUST00000039959.11|1810046K07Rik|ENSMUSG00000036027.14|RIKEN cDNA 1810046K07 gene	ENSMUST00000238450.3|1810046K07Rik|ENSMUSG00000036027.14|RIKEN cDNA 1810046K07 gene
mm39_v1_chr8_-_70591799_70591812	1.26668	Hoxc13_Hoxd13	ENSMUST00000075724.9|Rfxank|ENSMUSG00000036120.11|regulatory factor X-associated ankyrin-containing protein
mm39_v1_chr10_+_87695886_87695985	1.26478	Hoxc13_Hoxd13	ENSMUST00000062862.13|Igf1|ENSMUSG00000020053.19|insulin-like growth factor 1
mm39_v1_chr13_-_63712140_63712140	1.25948	Hoxc13_Hoxd13	ENSMUST00000195756.6|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr7_+_28240262_28240340	1.19371	Hoxc13_Hoxd13	ENSMUST00000119180.4|Sycn|ENSMUSG00000084174.4|syncollin
mm39_v1_chr5_+_114284585_114284616	1.1927	Hoxc13_Hoxd13	ENSMUST00000102582.8|Acacb|ENSMUSG00000042010.17|acetyl-Coenzyme A carboxylase beta
mm39_v1_chr10_+_116111441_116111481	1.19078	Hoxc13_Hoxd13	ENSMUST00000218553.2|Ptprb|ENSMUSG00000020154.11|protein tyrosine phosphatase, receptor type, B
mm39_v1_chr6_+_108190163_108190231	1.13295	Hoxc13_Hoxd13	ENSMUST00000203615.3|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chr3_+_79793237_79793309	1.08196	Hoxc13_Hoxd13	ENSMUST00000029567.9|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr14_-_66361931_66361954	1.07903	Hoxc13_Hoxd13	ENSMUST00000070515.2|Ephx2|ENSMUSG00000022040.9|epoxide hydrolase 2, cytoplasmic
mm39_v1_chr17_+_35658131_35658171	1.0749	Hoxc13_Hoxd13	ENSMUST00000071951.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000116598.10|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000078205.14|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7	ENSMUST00000076256.8|H2-Q7|ENSMUSG00000060550.17|histocompatibility 2, Q region locus 7
mm39_v1_chr16_+_34815177_34815240	1.07253	Hoxc13_Hoxd13	ENSMUST00000231589.2|Mylk|ENSMUSG00000022836.12|myosin, light polypeptide kinase
mm39_v1_chr7_+_67297152_67297204	1.06653	Hoxc13_Hoxd13	ENSMUST00000032774.16|Ttc23|ENSMUSG00000030555.17|tetratricopeptide repeat domain 23	ENSMUST00000107471.8|Ttc23|ENSMUSG00000030555.17|tetratricopeptide repeat domain 23
mm39_v1_chr2_-_127634387_127634425	1.00235	Hoxc13_Hoxd13	ENSMUST00000135091.2|Mtln|ENSMUSG00000051319.7|mitoregulin
mm39_v1_chr8_-_70591746_70591782	0.978529	Hoxc13_Hoxd13	ENSMUST00000212320.2|Rfxank|ENSMUSG00000036120.11|regulatory factor X-associated ankyrin-containing protein
mm39_v1_chr7_-_73187369_73187513	0.926732	Hoxc13_Hoxd13	ENSMUST00000172704.6|Chd2|ENSMUSG00000078671.12|chromodomain helicase DNA binding protein 2
mm39_v1_chr5_-_122639840_122639958	0.921781	Hoxc13_Hoxd13	ENSMUST00000177974.8|Atp2a2|ENSMUSG00000029467.16|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
mm39_v1_chr6_-_24528012_24528033	0.864214	Hoxc13_Hoxd13	ENSMUST00000023851.9|Ndufa5|ENSMUSG00000023089.13|NADH:ubiquinone oxidoreductase subunit A5
mm39_v1_chr6_+_108190050_108190065	0.834497	Hoxc13_Hoxd13	ENSMUST00000032192.9|Itpr1|ENSMUSG00000030102.12|inositol 1,4,5-trisphosphate receptor 1
mm39_v1_chr1_+_181952302_181952383	0.832353	Hoxc13_Hoxd13	ENSMUST00000111018.2|Srp9|ENSMUSG00000026511.8|signal recognition particle 9	ENSMUST00000027792.6|Srp9|ENSMUSG00000026511.8|signal recognition particle 9
mm39_v1_chr10_+_116137277_116137333	0.759032	Hoxc13_Hoxd13	ENSMUST00000092167.7|Ptprb|ENSMUSG00000020154.11|protein tyrosine phosphatase, receptor type, B
mm39_v1_chr5_+_128677863_128677912	0.744234	Hoxc13_Hoxd13	ENSMUST00000117102.4|Fzd10|ENSMUSG00000081683.6|frizzled class receptor 10
mm39_v1_chr11_-_53321242_53321261	0.713757	Hoxc13_Hoxd13	ENSMUST00000109019.8|Uqcrq|ENSMUSG00000044894.15|ubiquinol-cytochrome c reductase, complex III subunit VII
mm39_v1_chr16_-_57051829_57051872	0.712916	Hoxc13_Hoxd13	ENSMUST00000023431.8|Tbc1d23|ENSMUSG00000022749.9|TBC1 domain family, member 23
mm39_v1_chr17_-_13981703_13981863	0.710672	Hoxc13_Hoxd13	ENSMUST00000127032.8|Tcte2|ENSMUSG00000038347.16|t-complex-associated testis expressed 2
mm39_v1_chr15_-_101336669_101336685	0.700266	Hoxc13_Hoxd13	ENSMUST00000081945.5|Krt87|ENSMUSG00000047641.9|keratin 87
mm39_v1_chr11_-_5492175_5492221	0.692061	Hoxc13_Hoxd13	ENSMUST00000020776.5|Ccdc117|ENSMUSG00000020482.5|coiled-coil domain containing 117
mm39_v1_chr5_+_90708962_90709076	0.623546	Hoxc13_Hoxd13	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr3_+_81904229_81904229	0.620965	Hoxc13_Hoxd13	ENSMUST00000029641.10|Asic5|ENSMUSG00000028008.11|acid-sensing (proton-gated) ion channel family member 5
mm39_v1_chr10_-_120815232_120815279	0.618373	Hoxc13_Hoxd13	ENSMUST00000119944.8|Lemd3|ENSMUSG00000048661.15|LEM domain containing 3	ENSMUST00000119093.2|Lemd3|ENSMUSG00000048661.15|LEM domain containing 3
mm39_v1_chr11_-_99907030_99907042	0.611461	Hoxc13_Hoxd13	ENSMUST00000018399.3|Krt33a|ENSMUSG00000035592.3|keratin 33A
mm39_v1_chr11_+_96085118_96085142	0.600636	Hoxc13_Hoxd13	ENSMUST00000062709.4|Hoxb13|ENSMUSG00000049604.4|homeobox B13
mm39_v1_chr16_-_57051727_57051768	0.589892	Hoxc13_Hoxd13	ENSMUST00000226586.2|Tbc1d23|ENSMUSG00000022749.9|TBC1 domain family, member 23
mm39_v1_chr19_+_18609343_18609372	0.58904	Hoxc13_Hoxd13	ENSMUST00000159572.9|Nmrk1|ENSMUSG00000037847.15|nicotinamide riboside kinase 1
mm39_v1_chr11_+_96177449_96177480	0.540602	Hoxc13_Hoxd13	ENSMUST00000049352.8|Hoxb7|ENSMUSG00000038721.9|homeobox B7
mm39_v1_chr11_-_99920694_99920713	0.540322	Hoxc13_Hoxd13	ENSMUST00000073890.4|Krt33b|ENSMUSG00000057723.4|keratin 33B
mm39_v1_chr13_-_17869314_17869371	0.539987	Hoxc13_Hoxd13	ENSMUST00000221598.2|Sugct|ENSMUSG00000055137.8|succinyl-CoA glutarate-CoA transferase	ENSMUST00000068545.6|Sugct|ENSMUSG00000055137.8|succinyl-CoA glutarate-CoA transferase	ENSMUST00000220514.2|Sugct|ENSMUSG00000055137.8|succinyl-CoA glutarate-CoA transferase
mm39_v1_chr18_+_36431732_36431732	0.529669	Hoxc13_Hoxd13	ENSMUST00000210490.3|Igip|ENSMUSG00000110185.3|IgA inducing protein
mm39_v1_chr6_-_52195663_52195696	0.502426	Hoxc13_Hoxd13	ENSMUST00000134367.4|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr4_+_54945038_54945087	0.467659	Hoxc13_Hoxd13	ENSMUST00000133895.8|Zfp462|ENSMUSG00000060206.12|zinc finger protein 462
mm39_v1_chr10_+_28544556_28544633	0.457441	Hoxc13_Hoxd13	ENSMUST00000161345.2|Themis|ENSMUSG00000049109.16|thymocyte selection associated
mm39_v1_chr16_+_41353360_41353429	0.434957	Hoxc13_Hoxd13	ENSMUST00000099761.10|Lsamp|ENSMUSG00000061080.12|limbic system-associated membrane protein
mm39_v1_chr1_+_60948149_60948193	0.407321	Hoxc13_Hoxd13	ENSMUST00000027164.9|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr13_-_51723473_51723523	0.404001	Hoxc13_Hoxd13	ENSMUST00000239056.2|Shc3|ENSMUSG00000021448.9|src homology 2 domain-containing transforming protein C3	ENSMUST00000223543.3|Shc3|ENSMUSG00000021448.9|src homology 2 domain-containing transforming protein C3
mm39_v1_chr1_+_107289659_107289659	0.401866	Hoxc13_Hoxd13	ENSMUST00000027566.3|Serpinb11|ENSMUSG00000026327.9|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 11
mm39_v1_chr12_+_11506053_11506080	0.399167	Hoxc13_Hoxd13	ENSMUST00000124065.2|Rad51ap2|ENSMUSG00000086022.2|RAD51 associated protein 2
mm39_v1_chr8_+_105991280_105991330	0.387986	Hoxc13_Hoxd13	ENSMUST00000036221.12|Fbxl8|ENSMUSG00000033313.12|F-box and leucine-rich repeat protein 8
mm39_v1_chr5_+_106024398_106024451	0.384953	Hoxc13_Hoxd13	ENSMUST00000150440.8|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326	ENSMUST00000031227.11|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326
mm39_v1_chr2_+_74528071_74528097	0.375533	Hoxc13_Hoxd13	ENSMUST00000059272.10|Hoxd9|ENSMUSG00000043342.10|homeobox D9
mm39_v1_chr1_-_138775317_138775457	0.373611	Hoxc13_Hoxd13	ENSMUST00000093486.10|Lhx9|ENSMUSG00000019230.15|LIM homeobox protein 9	ENSMUST00000046870.13|Lhx9|ENSMUSG00000019230.15|LIM homeobox protein 9
mm39_v1_chr2_-_111815654_111815654	0.362135	Hoxc13_Hoxd13	ENSMUST00000214537.2|Olfr1309|ENSMUSG00000109528.3|olfactory receptor 1309
mm39_v1_chr6_+_48425034_48425163	0.353721	Hoxc13_Hoxd13	ENSMUST00000212740.2|Sspo|ENSMUSG00000029797.14|SCO-spondin	ENSMUST00000169350.9|Sspo|ENSMUSG00000029797.14|SCO-spondin	ENSMUST00000043676.12|Sspo|ENSMUSG00000029797.14|SCO-spondin
mm39_v1_chr11_-_99979052_99979096	0.341556	Hoxc13_Hoxd13	ENSMUST00000107419.2|Krt32|ENSMUSG00000046095.6|keratin 32
mm39_v1_chr12_+_75355082_75355096	0.34149	Hoxc13_Hoxd13	ENSMUST00000118602.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000118966.8|Rhoj|ENSMUSG00000046768.14|ras homolog family member J	ENSMUST00000055390.6|Rhoj|ENSMUSG00000046768.14|ras homolog family member J
mm39_v1_chr8_-_25528972_25528986	0.320962	Hoxc13_Hoxd13	ENSMUST00000084031.6|Htra4|ENSMUSG00000037406.8|HtrA serine peptidase 4
mm39_v1_chr17_+_8502682_8502693	0.315977	Hoxc13_Hoxd13	ENSMUST00000124023.8|Mpc1|ENSMUSG00000023861.18|mitochondrial pyruvate carrier 1
mm39_v1_chr15_-_66158445_66158509	0.315779	Hoxc13_Hoxd13	ENSMUST00000070256.9|Kcnq3|ENSMUSG00000056258.10|potassium voltage-gated channel, subfamily Q, member 3
mm39_v1_chr10_-_128532126_128532142	0.2928	Hoxc13_Hoxd13	ENSMUST00000000727.4|Rab5b|ENSMUSG00000000711.4|RAB5B, member RAS oncogene family
mm39_v1_chr5_+_135093056_135093108	0.289415	Hoxc13_Hoxd13	ENSMUST00000071263.7|Dnajc30|ENSMUSG00000061118.9|DnaJ heat shock protein family (Hsp40) member C30
mm39_v1_chr2_-_34261121_34261265	0.287242	Hoxc13_Hoxd13	ENSMUST00000127353.3|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3	ENSMUST00000141653.3|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3
mm39_v1_chr5_+_17779273_17779291	0.28006	Hoxc13_Hoxd13	ENSMUST00000030568.14|Sema3c|ENSMUSG00000028780.14|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
mm39_v1_chr13_-_63712349_63712349	0.263038	Hoxc13_Hoxd13	ENSMUST00000192155.6|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr10_+_28544356_28544400	0.261218	Hoxc13_Hoxd13	ENSMUST00000060409.13|Themis|ENSMUSG00000049109.16|thymocyte selection associated	ENSMUST00000056097.11|Themis|ENSMUSG00000049109.16|thymocyte selection associated	ENSMUST00000105516.9|Themis|ENSMUSG00000049109.16|thymocyte selection associated
mm39_v1_chr5_+_150119860_150119931	0.254926	Hoxc13_Hoxd13	ENSMUST00000202600.4|Fry|ENSMUSG00000056602.14|FRY microtubule binding protein
mm39_v1_chr6_+_24528143_24528199	0.246882	Hoxc13_Hoxd13	ENSMUST00000031696.10|Asb15|ENSMUSG00000029685.16|ankyrin repeat and SOCS box-containing 15
mm39_v1_chr8_+_113296675_113296692	0.242468	Hoxc13_Hoxd13	ENSMUST00000034225.7|Cntnap4|ENSMUSG00000031772.18|contactin associated protein-like 4	ENSMUST00000118171.8|Cntnap4|ENSMUSG00000031772.18|contactin associated protein-like 4
mm39_v1_chr16_-_89305201_89305217	0.241498	Hoxc13_Hoxd13	ENSMUST00000056118.4|Krtap7-1|ENSMUSG00000056706.4|keratin associated protein 7-1
mm39_v1_chr11_-_99996452_99996471	0.228329	Hoxc13_Hoxd13	ENSMUST00000107416.3|Krt36|ENSMUSG00000020916.9|keratin 36
mm39_v1_chr17_+_8502594_8502661	0.22793	Hoxc13_Hoxd13	ENSMUST00000155364.8|Mpc1|ENSMUSG00000023861.18|mitochondrial pyruvate carrier 1	ENSMUST00000046754.15|Mpc1|ENSMUSG00000023861.18|mitochondrial pyruvate carrier 1
mm39_v1_chr17_-_52133594_52133629	0.226129	Hoxc13_Hoxd13	ENSMUST00000129667.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1	ENSMUST00000169480.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1	ENSMUST00000148559.2|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr11_-_99412084_99412121	0.225232	Hoxc13_Hoxd13	ENSMUST00000076948.2|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr1_-_39844467_39844493	0.219094	Hoxc13_Hoxd13	ENSMUST00000171319.4|Gm3646|ENSMUSG00000091937.4|predicted gene 3646
mm39_v1_chr9_-_110775143_110775226	0.217432	Hoxc13_Hoxd13	ENSMUST00000199782.2|Tdgf1|ENSMUSG00000032494.13|teratocarcinoma-derived growth factor 1	ENSMUST00000035075.13|Tdgf1|ENSMUSG00000032494.13|teratocarcinoma-derived growth factor 1
mm39_v1_chr16_+_23044763_23044828	0.215452	Hoxc13_Hoxd13	ENSMUST00000178797.8|St6gal1|ENSMUSG00000022885.17|beta galactoside alpha 2,6 sialyltransferase 1
mm39_v1_chr15_-_101482320_101482349	0.214353	Hoxc13_Hoxd13	ENSMUST00000042957.6|Krt75|ENSMUSG00000022986.6|keratin 75
mm39_v1_chr6_-_52194414_52194432	0.210941	Hoxc13_Hoxd13	ENSMUST00000140316.2|Hoxa7|ENSMUSG00000038236.9|homeobox A7
mm39_v1_chr1_+_53352780_53352841	0.205263	Hoxc13_Hoxd13	ENSMUST00000027265.10|Osgepl1|ENSMUSG00000026096.15|O-sialoglycoprotein endopeptidase-like 1	ENSMUST00000114484.8|Osgepl1|ENSMUSG00000026096.15|O-sialoglycoprotein endopeptidase-like 1
mm39_v1_chr3_-_88366159_88366205	0.201911	Hoxc13_Hoxd13	ENSMUST00000147200.8|Sema4a|ENSMUSG00000028064.18|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A	ENSMUST00000169222.8|Sema4a|ENSMUSG00000028064.18|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm39_v1_chr7_-_28329924_28329993	0.199621	Hoxc13_Hoxd13	ENSMUST00000159095.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159418.8|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000159560.3|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr7_-_30312246_30312305	0.197682	Hoxc13_Hoxd13	ENSMUST00000006476.6|Upk1a|ENSMUSG00000006313.6|uroplakin 1A
mm39_v1_chr4_+_21879660_21879726	0.193508	Hoxc13_Hoxd13	ENSMUST00000029909.3|Coq3|ENSMUSG00000028247.3|coenzyme Q3 methyltransferase
mm39_v1_chr5_+_48140480_48140504	0.186452	Hoxc13_Hoxd13	ENSMUST00000173107.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174313.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000174421.8|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2	ENSMUST00000170109.9|Slit2|ENSMUSG00000031558.16|slit guidance ligand 2
mm39_v1_chr2_-_45001141_45001186	0.182546	Hoxc13_Hoxd13	ENSMUST00000201969.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000201623.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr11_-_99412162_99412166	0.18225	Hoxc13_Hoxd13	ENSMUST00000107445.8|Krt39|ENSMUSG00000064165.9|keratin 39
mm39_v1_chr8_-_37200051_37200208	0.180132	Hoxc13_Hoxd13	ENSMUST00000098826.10|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr15_+_23036535_23036599	0.168814	Hoxc13_Hoxd13	ENSMUST00000164787.8|Cdh18|ENSMUSG00000040420.16|cadherin 18
mm39_v1_chr14_+_65903840_65903865	0.165103	Hoxc13_Hoxd13	ENSMUST00000022610.15|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr10_-_33920300_33920315	0.164697	Hoxc13_Hoxd13	ENSMUST00000048052.7|Calhm4|ENSMUSG00000039508.7|calcium homeostasis modulator family member 4
mm39_v1_chr14_+_58308004_58308004	0.159046	Hoxc13_Hoxd13	ENSMUST00000165526.9|Fgf9|ENSMUSG00000021974.16|fibroblast growth factor 9
mm39_v1_chr7_-_28330322_28330492	0.156348	Hoxc13_Hoxd13	ENSMUST00000040112.5|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant	ENSMUST00000239470.2|Acp7|ENSMUSG00000037469.12|acid phosphatase 7, tartrate resistant
mm39_v1_chr2_-_17465410_17465446	0.150444	Hoxc13_Hoxd13	ENSMUST00000145492.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr5_-_106606032_106606032	0.14942	Hoxc13_Hoxd13	ENSMUST00000086795.8|Barhl2|ENSMUSG00000034384.12|BarH like homeobox 2
mm39_v1_chr11_+_105885461_105885504	0.14648	Hoxc13_Hoxd13	ENSMUST00000190995.2|Ace3|ENSMUSG00000101605.2|angiotensin I converting enzyme (peptidyl-dipeptidase A) 3
mm39_v1_chr11_-_88608958_88609022	0.139756	Hoxc13_Hoxd13	ENSMUST00000107908.2|Msi2|ENSMUSG00000069769.14|musashi RNA-binding protein 2
mm39_v1_chr15_-_101441254_101441259	0.138304	Hoxc13_Hoxd13	ENSMUST00000023720.8|Krt84|ENSMUSG00000044294.9|keratin 84
mm39_v1_chr7_-_30750828_30750847	0.13478	Hoxc13_Hoxd13	ENSMUST00000206341.2|Fxyd7|ENSMUSG00000036578.8|FXYD domain-containing ion transport regulator 7
mm39_v1_chr7_-_102408573_102408684	0.131542	Hoxc13_Hoxd13	ENSMUST00000210453.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000232246.3|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000239110.2|Olfr560|ENSMUSG00000110008.6|olfactory receptor 560	ENSMUST00000060187.15|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78	ENSMUST00000168007.3|Olfr78|ENSMUSG00000043366.17|olfactory receptor 78
mm39_v1_chr12_-_34578842_34578903	0.126564	Hoxc13_Hoxd13	ENSMUST00000110819.4|Hdac9|ENSMUSG00000004698.12|histone deacetylase 9
mm39_v1_chr18_-_46413886_46413908	0.124147	Hoxc13_Hoxd13	ENSMUST00000236999.2|Pggt1b|ENSMUSG00000024477.5|protein geranylgeranyltransferase type I, beta subunit
mm39_v1_chr11_-_99941369_99941382	0.121923	Hoxc13_Hoxd13	ENSMUST00000007318.2|Krt31|ENSMUSG00000048981.2|keratin 31
mm39_v1_chr3_-_49711706_49711758	0.121354	Hoxc13_Hoxd13	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr4_+_134042423_134042437	0.116138	Hoxc13_Hoxd13	ENSMUST00000105875.8|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63	ENSMUST00000030638.7|Trim63|ENSMUSG00000028834.14|tripartite motif-containing 63
mm39_v1_chr8_-_15096046_15096092	0.116039	Hoxc13_Hoxd13	ENSMUST00000050493.4|BB014433|ENSMUSG00000049008.5|expressed sequence BB014433	ENSMUST00000123331.2|BB014433|ENSMUSG00000049008.5|expressed sequence BB014433
mm39_v1_chr1_+_60948307_60948330	0.115722	Hoxc13_Hoxd13	ENSMUST00000097720.4|Ctla4|ENSMUSG00000026011.14|cytotoxic T-lymphocyte-associated protein 4
mm39_v1_chr3_+_126391046_126391076	0.115143	Hoxc13_Hoxd13	ENSMUST00000106401.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr9_-_96601574_96601618	0.112187	Hoxc13_Hoxd13	ENSMUST00000128269.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr3_-_75359125_75359125	0.109218	Hoxc13_Hoxd13	ENSMUST00000204341.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chr11_-_23845207_23845280	0.108309	Hoxc13_Hoxd13	ENSMUST00000102863.3|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma	ENSMUST00000020513.10|Papolg|ENSMUSG00000020273.14|poly(A) polymerase gamma
mm39_v1_chr16_+_39804711_39804742	0.105001	Hoxc13_Hoxd13	ENSMUST00000187695.7|Lsamp|ENSMUSG00000061080.12|limbic system-associated membrane protein
mm39_v1_chr9_-_50571080_50571107	0.102186	Hoxc13_Hoxd13	ENSMUST00000034567.4|Dlat|ENSMUSG00000000168.11|dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)
mm39_v1_chr18_+_69478893_69478922	0.100593	Hoxc13_Hoxd13	ENSMUST00000202354.4|Tcf4|ENSMUSG00000053477.19|transcription factor 4
mm39_v1_chr14_-_118289557_118289597	0.0980977	Hoxc13_Hoxd13	ENSMUST00000022725.4|Dct|ENSMUSG00000022129.5|dopachrome tautomerase
mm39_v1_chr10_-_107321938_107321995	0.0933297	Hoxc13_Hoxd13	ENSMUST00000000445.2|Myf5|ENSMUSG00000000435.2|myogenic factor 5
mm39_v1_chrX_+_111150171_111150280	0.0920525	Hoxc13_Hoxd13	ENSMUST00000164272.3|4933403O08Rik|ENSMUSG00000079460.12|RIKEN cDNA 4933403O08 gene	ENSMUST00000132037.2|4933403O08Rik|ENSMUSG00000079460.12|RIKEN cDNA 4933403O08 gene
mm39_v1_chr11_-_99987051_99987068	0.0919897	Hoxc13_Hoxd13	ENSMUST00000103127.4|Krt35|ENSMUSG00000048013.10|keratin 35
mm39_v1_chr5_+_92957231_92957295	0.0905658	Hoxc13_Hoxd13	ENSMUST00000113054.9|Shroom3|ENSMUSG00000029381.17|shroom family member 3
mm39_v1_chr2_+_20727274_20727436	0.0903549	Hoxc13_Hoxd13	ENSMUST00000114607.8|Etl4|ENSMUSG00000036617.18|enhancer trap locus 4
mm39_v1_chr7_-_30750856_30750911	0.0882881	Hoxc13_Hoxd13	ENSMUST00000073892.6|Fxyd7|ENSMUSG00000036578.8|FXYD domain-containing ion transport regulator 7
mm39_v1_chr11_-_102298748_102298777	0.0861756	Hoxc13_Hoxd13	ENSMUST00000124755.2|Slc25a39|ENSMUSG00000018677.10|solute carrier family 25, member 39
mm39_v1_chr17_-_57307018_57307018	0.0855607	Hoxc13_Hoxd13	ENSMUST00000002740.3|Pspn|ENSMUSG00000002664.3|persephin
mm39_v1_chr9_+_110948492_110948516	0.0808804	Hoxc13_Hoxd13	ENSMUST00000217341.3|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chr7_-_133281790_133281790	0.0790469	Hoxc13_Hoxd13	ENSMUST00000033278.8|Mmp21|ENSMUSG00000030981.10|matrix metallopeptidase 21	ENSMUST00000122136.2|Mmp21|ENSMUSG00000030981.10|matrix metallopeptidase 21
mm39_v1_chr5_-_62923463_62923615	0.0756909	Hoxc13_Hoxd13	ENSMUST00000076623.8|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	ENSMUST00000159470.3|Arap2|ENSMUSG00000037999.14|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2
mm39_v1_chrX_-_135769285_135769504	0.0695378	Hoxc13_Hoxd13	ENSMUST00000058814.7|Rab9b|ENSMUSG00000043463.7|RAB9B, member RAS oncogene family
mm39_v1_chr11_-_102298281_102298370	0.0666309	Hoxc13_Hoxd13	ENSMUST00000107098.8|Slc25a39|ENSMUSG00000018677.10|solute carrier family 25, member 39	ENSMUST00000018821.9|Slc25a39|ENSMUSG00000018677.10|solute carrier family 25, member 39
mm39_v1_chr8_-_43981143_43981143	0.0655416	Hoxc13_Hoxd13	ENSMUST00000080135.5|Adam26b|ENSMUSG00000063900.6|a disintegrin and metallopeptidase domain 26B
mm39_v1_chr3_+_102642516_102642554	0.0641205	Hoxc13_Hoxd13	ENSMUST00000119902.6|Tspan2|ENSMUSG00000027858.14|tetraspanin 2
mm39_v1_chr8_+_34143266_34143266	0.0620202	Hoxc13_Hoxd13	ENSMUST00000033992.9|Gsr|ENSMUSG00000031584.17|glutathione reductase
mm39_v1_chr14_+_77394173_77394265	0.0602955	Hoxc13_Hoxd13	ENSMUST00000022589.9|Enox1|ENSMUSG00000022012.10|ecto-NOX disulfide-thiol exchanger 1
mm39_v1_chr17_+_37274714_37274729	0.0580616	Hoxc13_Hoxd13	ENSMUST00000209623.2|Polr1has|ENSMUSG00000036214.15|RNA polymerase I subunit H, antisense
mm39_v1_chr10_-_28862289_28862305	0.0557984	Hoxc13_Hoxd13	ENSMUST00000152363.8|2310057J18Rik|ENSMUSG00000015519.13|RIKEN cDNA 2310057J18 gene	ENSMUST00000015663.7|2310057J18Rik|ENSMUSG00000015519.13|RIKEN cDNA 2310057J18 gene
mm39_v1_chr5_-_135092904_135092971	0.0548257	Hoxc13_Hoxd13	ENSMUST00000111205.8|Bud23|ENSMUSG00000005378.18|BUD23, rRNA methyltransferase and ribosome maturation factor	ENSMUST00000141309.2|Bud23|ENSMUSG00000005378.18|BUD23, rRNA methyltransferase and ribosome maturation factor
mm39_v1_chr10_-_78688000_78688000	0.052059	Hoxc13_Hoxd13	ENSMUST00000205100.3|Olfr1356|ENSMUSG00000051190.9|olfactory receptor 1356
mm39_v1_chr3_+_126390951_126390964	0.0513262	Hoxc13_Hoxd13	ENSMUST00000171289.8|Camk2d|ENSMUSG00000053819.17|calcium/calmodulin-dependent protein kinase II, delta
mm39_v1_chr1_-_171854818_171854880	0.0390065	Hoxc13_Hoxd13	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr2_-_44912927_44912996	0.0371138	Hoxc13_Hoxd13	ENSMUST00000202432.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr13_-_21586858_21586925	0.0344684	Hoxc13_Hoxd13	ENSMUST00000117721.8|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000070785.16|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116433.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000223831.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000116434.11|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3	ENSMUST00000224820.2|Zkscan3|ENSMUSG00000021327.20|zinc finger with KRAB and SCAN domains 3
mm39_v1_chr9_+_38119661_38119661	0.030344	Hoxc13_Hoxd13	ENSMUST00000211975.3|Olfr893|ENSMUSG00000093901.4|olfactory receptor 893
mm39_v1_chr14_+_65903878_65903892	0.0260489	Hoxc13_Hoxd13	ENSMUST00000069226.7|Scara5|ENSMUSG00000022032.15|scavenger receptor class A, member 5
mm39_v1_chr6_-_112924205_112924239	0.0236088	Hoxc13_Hoxd13	ENSMUST00000088373.11|Srgap3|ENSMUSG00000030257.17|SLIT-ROBO Rho GTPase activating protein 3
mm39_v1_chr12_+_113038376_113038392	0.016639	Hoxc13_Hoxd13	ENSMUST00000109729.3|Tex22|ENSMUSG00000012211.14|testis expressed gene 22
mm39_v1_chr18_+_37488174_37488324	0.0105454	Hoxc13_Hoxd13	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr5_+_149942140_149942264	0.00904558	Hoxc13_Hoxd13	ENSMUST00000065745.10|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2	ENSMUST00000110496.5|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2	ENSMUST00000201612.2|Rxfp2|ENSMUSG00000053368.14|relaxin/insulin-like family peptide receptor 2
mm39_v1_chr13_-_40887444_40887467	0.00241034	Hoxc13_Hoxd13	ENSMUST00000224665.2|Tfap2a|ENSMUSG00000021359.17|transcription factor AP-2, alpha
