mm39_v1_chr1_-_51955054_51955118	5.15212	Gli2	ENSMUST00000018561.14|Myo1b|ENSMUSG00000018417.15|myosin IB	ENSMUST00000114537.9|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr3_+_97536120_97536180	4.98164	Gli2	ENSMUST00000107050.8|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5	ENSMUST00000029729.15|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5	ENSMUST00000107049.2|Fmo5|ENSMUSG00000028088.15|flavin containing monooxygenase 5
mm39_v1_chr4_-_154983533_154983592	4.85051	Gli2	ENSMUST00000030935.10|Prxl2b|ENSMUSG00000029059.10|peroxiredoxin like 2B	ENSMUST00000132281.2|Prxl2b|ENSMUSG00000029059.10|peroxiredoxin like 2B
mm39_v1_chr5_-_53370761_53370826	4.8105	Gli2	ENSMUST00000031090.8|Sel1l3|ENSMUSG00000029189.11|sel-1 suppressor of lin-12-like 3 (C. elegans)
mm39_v1_chr1_-_51955126_51955230	4.80116	Gli2	ENSMUST00000046390.14|Myo1b|ENSMUSG00000018417.15|myosin IB
mm39_v1_chr9_+_107454114_107454189	3.80443	Gli2	ENSMUST00000112387.9|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000123005.8|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000010195.14|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1	ENSMUST00000144392.2|Hyal1|ENSMUSG00000010051.16|hyaluronoglucosaminidase 1
mm39_v1_chr1_-_180027151_180027172	3.59171	Gli2	ENSMUST00000161743.3|Coq8a|ENSMUSG00000026489.14|coenzyme Q8A
mm39_v1_chr8_+_127790772_127791097	3.40402	Gli2	ENSMUST00000079777.12|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160272.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162907.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162536.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000026921.13|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162665.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162602.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160581.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000161355.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000162531.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000160766.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator	ENSMUST00000159537.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr9_+_100525807_100525823	3.2164	Gli2	ENSMUST00000133388.2|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr4_-_120955387_120955447	2.84327	Gli2	ENSMUST00000058754.9|Zmpste24|ENSMUSG00000043207.11|zinc metallopeptidase, STE24
mm39_v1_chr9_+_100525637_100525691	2.61866	Gli2	ENSMUST00000041418.13|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr2_-_157408239_157408281	2.49439	Gli2	ENSMUST00000109528.9|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein	ENSMUST00000088494.3|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein
mm39_v1_chr17_-_24428351_24428505	2.31197	Gli2	ENSMUST00000024931.6|Ntn3|ENSMUSG00000117406.2|netrin 3
mm39_v1_chr2_-_32271833_32271920	2.2474	Gli2	ENSMUST00000146423.2|1110008P14Rik|ENSMUSG00000039195.5|RIKEN cDNA 1110008P14 gene
mm39_v1_chr2_-_121786573_121786573	2.19465	Gli2	ENSMUST00000104936.4|Mageb3|ENSMUSG00000074881.5|MAGE family member B3
mm39_v1_chr12_-_70274433_70274457	2.18947	Gli2	ENSMUST00000071250.13|Pygl|ENSMUSG00000021069.18|liver glycogen phosphorylase
mm39_v1_chr2_+_69727599_69727647	2.18042	Gli2	ENSMUST00000131553.2|Ubr3|ENSMUSG00000044308.18|ubiquitin protein ligase E3 component n-recognin 3
mm39_v1_chr4_-_46536088_46536145	2.09162	Gli2	ENSMUST00000102924.3|Trim14|ENSMUSG00000039853.19|tripartite motif-containing 14	ENSMUST00000046897.13|Trim14|ENSMUSG00000039853.19|tripartite motif-containing 14
mm39_v1_chr9_+_100525501_100525594	2.08654	Gli2	ENSMUST00000146312.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1	ENSMUST00000129269.8|Stag1|ENSMUSG00000037286.16|stromal antigen 1
mm39_v1_chr9_+_108924457_108924480	2.06871	Gli2	ENSMUST00000072093.13|Plxnb1|ENSMUSG00000053646.14|plexin B1
mm39_v1_chr1_-_93406091_93406113	1.99491	Gli2	ENSMUST00000188165.2|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr11_+_118913788_118913932	1.98774	Gli2	ENSMUST00000026662.8|Cbx2|ENSMUSG00000025577.8|chromobox 2
mm39_v1_chr6_+_137731526_137731598	1.89924	Gli2	ENSMUST00000203216.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000087675.9|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)	ENSMUST00000203693.3|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr8_+_91635192_91635248	1.87012	Gli2	ENSMUST00000211403.2|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chrX_-_9529189_9529242	1.7922	Gli2	ENSMUST00000033519.3|Dynlt3|ENSMUSG00000031176.9|dynein light chain Tctex-type 3
mm39_v1_chr8_+_77628916_77629104	1.78248	Gli2	ENSMUST00000109912.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000128862.2|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2	ENSMUST00000109911.8|Nr3c2|ENSMUSG00000031618.14|nuclear receptor subfamily 3, group C, member 2
mm39_v1_chr7_-_81104423_81104512	1.749	Gli2	ENSMUST00000178892.3|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1	ENSMUST00000098331.10|Cpeb1|ENSMUSG00000025586.18|cytoplasmic polyadenylation element binding protein 1
mm39_v1_chr16_+_4825216_4825241	1.7428	Gli2	ENSMUST00000185147.8|Smim22|ENSMUSG00000096215.9|small integral membrane protein 22
mm39_v1_chr6_+_113448388_113448436	1.74129	Gli2	ENSMUST00000058300.14|Il17rc|ENSMUSG00000030281.17|interleukin 17 receptor C
mm39_v1_chr6_+_137731599_137731613	1.73962	Gli2	ENSMUST00000204356.2|Dera|ENSMUSG00000030225.12|deoxyribose-phosphate aldolase (putative)
mm39_v1_chr19_-_38113249_38113276	1.71329	Gli2	ENSMUST00000112335.4|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma
mm39_v1_chr1_-_175453117_175453201	1.64449	Gli2	ENSMUST00000027810.14|Fh1|ENSMUSG00000026526.15|fumarate hydratase 1
mm39_v1_chr2_+_160573604_160573691	1.6163	Gli2	ENSMUST00000174885.2|Plcg1|ENSMUSG00000016933.18|phospholipase C, gamma 1	ENSMUST00000109462.8|Plcg1|ENSMUSG00000016933.18|phospholipase C, gamma 1
mm39_v1_chr4_+_41760454_41760521	1.60104	Gli2	ENSMUST00000108040.8|Il11ra1|ENSMUSG00000073889.11|interleukin 11 receptor, alpha chain 1
mm39_v1_chr10_-_127099183_127099237	1.56057	Gli2	ENSMUST00000099172.5|Kif5a|ENSMUSG00000074657.6|kinesin family member 5A
mm39_v1_chr7_+_28240262_28240340	1.49653	Gli2	ENSMUST00000119180.4|Sycn|ENSMUSG00000084174.4|syncollin
mm39_v1_chrX_-_73067514_73067524	1.49587	Gli2	ENSMUST00000033769.15|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114352.8|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000068286.12|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114360.10|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1	ENSMUST00000114354.10|Irak1|ENSMUSG00000031392.19|interleukin-1 receptor-associated kinase 1
mm39_v1_chr11_+_72686990_72687072	1.4841	Gli2	ENSMUST00000069395.7|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1	ENSMUST00000172220.8|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chr10_+_83379805_83379873	1.44789	Gli2	ENSMUST00000038388.7|Washc4|ENSMUSG00000034560.7|WASH complex subunit 4
mm39_v1_chr2_-_37593287_37593302	1.43843	Gli2	ENSMUST00000072186.12|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr12_-_69771604_69771659	1.4312	Gli2	ENSMUST00000021370.10|L2hgdh|ENSMUSG00000020988.10|L-2-hydroxyglutarate dehydrogenase
mm39_v1_chr7_-_65020955_65021041	1.42789	Gli2	ENSMUST00000102592.10|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr10_-_127098932_127098970	1.40862	Gli2	ENSMUST00000217895.2|Kif5a|ENSMUSG00000074657.6|kinesin family member 5A
mm39_v1_chr13_-_54759086_54759112	1.40376	Gli2	ENSMUST00000049575.8|Cltb|ENSMUSG00000047547.15|clathrin, light polypeptide (Lcb)
mm39_v1_chr11_+_70735751_70735801	1.39229	Gli2	ENSMUST00000177731.8|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000108533.10|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000081362.13|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000178245.2|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1
mm39_v1_chr19_+_6097111_6097134	1.3848	Gli2	ENSMUST00000025723.9|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr1_-_93406515_93406544	1.36308	Gli2	ENSMUST00000170883.8|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein	ENSMUST00000189025.7|Hdlbp|ENSMUSG00000034088.16|high density lipoprotein (HDL) binding protein
mm39_v1_chr19_-_38113056_38113173	1.3295	Gli2	ENSMUST00000236283.2|Rbp4|ENSMUSG00000024990.14|retinol binding protein 4, plasma
mm39_v1_chr19_+_6097083_6097110	1.32288	Gli2	ENSMUST00000134667.8|Syvn1|ENSMUSG00000024807.19|synovial apoptosis inhibitor 1, synoviolin
mm39_v1_chr2_+_121786892_121786970	1.32264	Gli2	ENSMUST00000110578.8|Ctdspl2|ENSMUSG00000033411.17|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm39_v1_chr8_+_120173458_120173505	1.29052	Gli2	ENSMUST00000098363.10|Necab2|ENSMUSG00000031837.15|N-terminal EF-hand calcium binding protein 2
mm39_v1_chr13_-_54759145_54759200	1.2675	Gli2	ENSMUST00000091609.11|Cltb|ENSMUSG00000047547.15|clathrin, light polypeptide (Lcb)
mm39_v1_chr2_-_121211410_121211428	1.22862	Gli2	ENSMUST00000038389.15|Strc|ENSMUSG00000033498.15|stereocilin
mm39_v1_chrX_+_160500623_160500653	1.21582	Gli2	ENSMUST00000061514.8|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr15_+_41310815_41310878	1.20666	Gli2	ENSMUST00000090096.11|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1	ENSMUST00000110297.10|Oxr1|ENSMUSG00000022307.17|oxidation resistance 1
mm39_v1_chr9_+_44966464_44966494	1.20356	Gli2	ENSMUST00000114664.8|Mpzl3|ENSMUSG00000070305.11|myelin protein zero-like 3
mm39_v1_chr12_-_32000209_32000245	1.18818	Gli2	ENSMUST00000176084.2|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000176103.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000167458.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr8_+_127790626_127790666	1.17756	Gli2	ENSMUST00000162309.8|Pard3|ENSMUSG00000025812.19|par-3 family cell polarity regulator
mm39_v1_chr7_+_81220987_81221068	1.13726	Gli2	ENSMUST00000165460.2|Whamm|ENSMUSG00000045795.11|WAS protein homolog associated with actin, golgi membranes and microtubules
mm39_v1_chr4_-_140376047_140376093	1.12553	Gli2	ENSMUST00000105799.8|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like	ENSMUST00000039204.10|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like	ENSMUST00000097820.9|Arhgef10l|ENSMUSG00000040964.17|Rho guanine nucleotide exchange factor (GEF) 10-like
mm39_v1_chr4_+_155916087_155916155	1.10155	Gli2	ENSMUST00000105592.8|Aurkaip1|ENSMUSG00000065990.13|aurora kinase A interacting protein 1	ENSMUST00000105591.2|Aurkaip1|ENSMUSG00000065990.13|aurora kinase A interacting protein 1
mm39_v1_chr11_-_121279062_121279093	1.08357	Gli2	ENSMUST00000106107.3|Rab40b|ENSMUSG00000025170.14|Rab40B, member RAS oncogene family
mm39_v1_chr3_+_106943472_106943497	1.07894	Gli2	ENSMUST00000052718.5|Kcna3|ENSMUSG00000047959.5|potassium voltage-gated channel, shaker-related subfamily, member 3
mm39_v1_chr9_+_100956145_100956165	1.07468	Gli2	ENSMUST00000189616.2|Msl2|ENSMUSG00000066415.5|MSL complex subunit 2
mm39_v1_chr17_+_24851647_24851688	1.05101	Gli2	ENSMUST00000047611.4|Nthl1|ENSMUSG00000041429.4|nth (endonuclease III)-like 1 (E.coli)
mm39_v1_chr1_+_167177545_167177622	1.04507	Gli2	ENSMUST00000028004.11|Aldh9a1|ENSMUSG00000026687.15|aldehyde dehydrogenase 9, subfamily A1
mm39_v1_chr5_-_139805661_139805687	1.04115	Gli2	ENSMUST00000147328.2|Tmem184a|ENSMUSG00000036687.14|transmembrane protein 184a
mm39_v1_chr12_-_32000169_32000196	1.0342	Gli2	ENSMUST00000176520.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr7_-_144292257_144292286	0.94235	Gli2	ENSMUST00000121758.8|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel
mm39_v1_chr14_-_65187287_65187335	0.924555	Gli2	ENSMUST00000067843.10|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176489.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175905.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000022544.14|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000175744.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1	ENSMUST00000176128.8|Hmbox1|ENSMUSG00000021972.15|homeobox containing 1
mm39_v1_chr11_+_70735572_70735642	0.902921	Gli2	ENSMUST00000076270.13|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000179114.8|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000100928.11|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1
mm39_v1_chr17_+_28910393_28910419	0.894093	Gli2	ENSMUST00000124886.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14	ENSMUST00000114758.9|Mapk14|ENSMUSG00000053436.16|mitogen-activated protein kinase 14
mm39_v1_chr11_+_29476423_29476474	0.891393	Gli2	ENSMUST00000136351.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000020749.13|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000144321.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2	ENSMUST00000093239.11|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2
mm39_v1_chr8_-_27664651_27664680	0.88504	Gli2	ENSMUST00000054212.7|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000033878.14|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)	ENSMUST00000209377.2|Rab11fip1|ENSMUSG00000031488.15|RAB11 family interacting protein 1 (class I)
mm39_v1_chr1_-_172418058_172418149	0.873996	Gli2	ENSMUST00000065679.8|Slamf8|ENSMUSG00000053318.8|SLAM family member 8
mm39_v1_chr1_-_36484328_36484352	0.865207	Gli2	ENSMUST00000125304.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like	ENSMUST00000115011.8|Lman2l|ENSMUSG00000001143.14|lectin, mannose-binding 2-like
mm39_v1_chrX_-_140508177_140508259	0.844699	Gli2	ENSMUST00000067841.8|Irs4|ENSMUSG00000054667.8|insulin receptor substrate 4
mm39_v1_chr8_+_85786684_85786716	0.83744	Gli2	ENSMUST00000095220.4|Fbxw9|ENSMUSG00000008167.15|F-box and WD-40 domain protein 9
mm39_v1_chr18_+_61688329_61688361	0.832401	Gli2	ENSMUST00000165123.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chr7_-_65020655_65020763	0.823955	Gli2	ENSMUST00000032729.8|Tjp1|ENSMUSG00000030516.15|tight junction protein 1
mm39_v1_chr11_+_29476385_29476420	0.817697	Gli2	ENSMUST00000133452.8|Mtif2|ENSMUSG00000020459.15|mitochondrial translational initiation factor 2
mm39_v1_chr16_+_19579651_19579804	0.816011	Gli2	ENSMUST00000119468.2|B3gnt5|ENSMUSG00000022686.15|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
mm39_v1_chr7_+_101034604_101034759	0.808615	Gli2	ENSMUST00000130016.8|Arap1|ENSMUSG00000032812.19|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	ENSMUST00000134143.2|Arap1|ENSMUSG00000032812.19|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm39_v1_chr7_+_40547608_40547752	0.804237	Gli2	ENSMUST00000044705.12|Vstm2b|ENSMUSG00000039257.12|V-set and transmembrane domain containing 2B
mm39_v1_chr8_-_13939964_13940005	0.797365	Gli2	ENSMUST00000209371.2|Coprs|ENSMUSG00000031458.9|coordinator of PRMT5, differentiation stimulator
mm39_v1_chr11_+_72687080_72687093	0.78675	Gli2	ENSMUST00000207107.2|Zzef1|ENSMUSG00000055670.15|zinc finger, ZZ-type with EF hand domain 1
mm39_v1_chr13_-_48779047_48779071	0.743471	Gli2	ENSMUST00000222028.2|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr7_-_144292288_144292346	0.738623	Gli2	ENSMUST00000238848.2|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel	ENSMUST00000118556.9|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel	ENSMUST00000033393.15|Ano1|ENSMUSG00000031075.20|anoctamin 1, calcium activated chloride channel
mm39_v1_chr5_-_92231517_92231585	0.724762	Gli2	ENSMUST00000202258.4|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2	ENSMUST00000113127.7|G3bp2|ENSMUSG00000029405.17|GTPase activating protein (SH3 domain) binding protein 2
mm39_v1_chr4_+_43401232_43401293	0.723435	Gli2	ENSMUST00000125399.2|Rusc2|ENSMUSG00000035969.16|RUN and SH3 domain containing 2
mm39_v1_chr17_-_56916771_56916819	0.71413	Gli2	ENSMUST00000052832.6|Micos13|ENSMUSG00000049760.7|mitochondrial contact site and cristae organizing system subunit 13
mm39_v1_chr18_-_35348049_35348092	0.709528	Gli2	ENSMUST00000091636.5|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2	ENSMUST00000236680.2|Lrrtm2|ENSMUSG00000071862.4|leucine rich repeat transmembrane neuronal 2
mm39_v1_chr11_+_106256298_106256325	0.698849	Gli2	ENSMUST00000009354.10|Prr29|ENSMUSG00000009210.11|proline rich 29
mm39_v1_chr7_-_132724344_132724513	0.668878	Gli2	ENSMUST00000167218.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chrX_+_160500051_160500068	0.635821	Gli2	ENSMUST00000112338.2|Rai2|ENSMUSG00000043518.8|retinoic acid induced 2
mm39_v1_chr3_-_59102517_59102531	0.612922	Gli2	ENSMUST00000200095.2|Gpr87|ENSMUSG00000051431.8|G protein-coupled receptor 87
mm39_v1_chr8_-_13940234_13940300	0.612002	Gli2	ENSMUST00000033839.9|Coprs|ENSMUSG00000031458.9|coordinator of PRMT5, differentiation stimulator
mm39_v1_chr17_+_45874800_45874899	0.592909	Gli2	ENSMUST00000224905.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000226086.2|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2	ENSMUST00000041353.7|Slc35b2|ENSMUSG00000037089.12|solute carrier family 35, member B2
mm39_v1_chr2_+_180141686_180141769	0.588755	Gli2	ENSMUST00000029084.9|Ntsr1|ENSMUSG00000027568.10|neurotensin receptor 1
mm39_v1_chr11_+_68582897_68582912	0.587027	Gli2	ENSMUST00000108673.8|Myh10|ENSMUSG00000020900.16|myosin, heavy polypeptide 10, non-muscle
mm39_v1_chr10_-_34003933_34003983	0.584617	Gli2	ENSMUST00000062784.8|Calhm6|ENSMUSG00000046031.8|calcium homeostasis modulator family member 6
mm39_v1_chr7_-_132725041_132725068	0.573792	Gli2	ENSMUST00000171022.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr11_-_94595325_94595325	0.568585	Gli2	ENSMUST00000069852.2|Gm11541|ENSMUSG00000056008.2|predicted gene 11541
mm39_v1_chr13_-_48779072_48779140	0.543788	Gli2	ENSMUST00000035824.11|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr7_-_57159119_57159143	0.525915	Gli2	ENSMUST00000206382.2|Gabra5|ENSMUSG00000055078.8|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
mm39_v1_chr11_+_73220553_73220574	0.519646	Gli2	ENSMUST00000092926.11|Spata22|ENSMUSG00000112920.2|spermatogenesis associated 22	ENSMUST00000117445.2|Gm49340|ENSMUSG00000069825.13|predicted gene, 49340
mm39_v1_chrX_+_7439839_7439883	0.516556	Gli2	ENSMUST00000144719.9|Flicr|ENSMUSG00000039545.17|Foxp3 regulating long intergenic noncoding RNA	ENSMUST00000234896.2|Foxp3|ENSMUSG00000039521.14|forkhead box P3
mm39_v1_chrX_-_166165743_166165757	0.508494	Gli2	ENSMUST00000026839.5|Prps2|ENSMUSG00000025742.6|phosphoribosyl pyrophosphate synthetase 2
mm39_v1_chr16_+_8647959_8647966	0.503887	Gli2	ENSMUST00000023150.7|1810013L24Rik|ENSMUSG00000022507.7|RIKEN cDNA 1810013L24 gene
mm39_v1_chr8_+_10056631_10056652	0.492019	Gli2	ENSMUST00000207792.3|Tnfsf13b|ENSMUSG00000031497.11|tumor necrosis factor (ligand) superfamily, member 13b
mm39_v1_chr17_-_25716189_25716262	0.484225	Gli2	ENSMUST00000165183.10|Sstr5|ENSMUSG00000050824.13|somatostatin receptor 5	ENSMUST00000051864.5|Sstr5|ENSMUSG00000050824.13|somatostatin receptor 5
mm39_v1_chr12_-_32000534_32000558	0.484131	Gli2	ENSMUST00000172314.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr18_+_61688378_61688416	0.483566	Gli2	ENSMUST00000165721.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000115246.9|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000166990.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000163205.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1	ENSMUST00000170862.8|Csnk1a1|ENSMUSG00000024576.15|casein kinase 1, alpha 1
mm39_v1_chr3_-_85909798_85909843	0.480725	Gli2	ENSMUST00000061343.4|Prss48|ENSMUSG00000049013.4|protease, serine 48
mm39_v1_chr7_-_132725137_132725154	0.478269	Gli2	ENSMUST00000170459.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chr11_+_70506716_70506736	0.433745	Gli2	ENSMUST00000144960.2|4930544D05Rik|ENSMUSG00000087279.11|RIKEN cDNA 4930544D05 gene
mm39_v1_chr11_-_100741550_100741588	0.418952	Gli2	ENSMUST00000004143.3|Stat5b|ENSMUSG00000020919.12|signal transducer and activator of transcription 5B
mm39_v1_chr18_+_35347983_35348189	0.417562	Gli2	ENSMUST00000235449.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1	ENSMUST00000235269.2|Ctnna1|ENSMUSG00000037815.8|catenin (cadherin associated protein), alpha 1
mm39_v1_chr2_+_164328375_164328575	0.414575	Gli2	ENSMUST00000069385.15|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2	ENSMUST00000143690.8|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm39_v1_chr11_+_70453666_70453723	0.409888	Gli2	ENSMUST00000072237.13|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000072873.14|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr15_-_78602313_78602313	0.401326	Gli2	ENSMUST00000229441.2|Elfn2|ENSMUSG00000043460.8|leucine rich repeat and fibronectin type III, extracellular 2
mm39_v1_chr11_+_115921129_115921215	0.401143	Gli2	ENSMUST00000021116.12|Unk|ENSMUSG00000020770.14|unkempt family zinc finger	ENSMUST00000106452.2|Unk|ENSMUSG00000020770.14|unkempt family zinc finger
mm39_v1_chr9_+_62249730_62249755	0.396082	Gli2	ENSMUST00000156461.2|Anp32a|ENSMUSG00000032249.15|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
mm39_v1_chr2_+_164327988_164328051	0.393944	Gli2	ENSMUST00000109350.9|Dbndd2|ENSMUSG00000017734.16|dysbindin (dystrobrevin binding protein 1) domain containing 2
mm39_v1_chr12_+_38830081_38830116	0.362666	Gli2	ENSMUST00000095767.11|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr5_+_8943677_8943744	0.358333	Gli2	ENSMUST00000003717.13|Abcb4|ENSMUSG00000042476.13|ATP-binding cassette, sub-family B (MDR/TAP), member 4
mm39_v1_chr8_+_10056654_10056703	0.35446	Gli2	ENSMUST00000033892.9|Tnfsf13b|ENSMUSG00000031497.11|tumor necrosis factor (ligand) superfamily, member 13b
mm39_v1_chr7_+_12615091_12615132	0.354288	Gli2	ENSMUST00000144578.2|Zfp128|ENSMUSG00000060397.7|zinc finger protein 128
mm39_v1_chr5_-_24732200_24732200	0.351747	Gli2	ENSMUST00000088311.6|Gbx1|ENSMUSG00000067724.6|gastrulation brain homeobox 1
mm39_v1_chr16_-_3895642_3895693	0.342282	Gli2	ENSMUST00000006137.9|Trap1|ENSMUSG00000005981.12|TNF receptor-associated protein 1
mm39_v1_chr16_-_31133622_31133626	0.34066	Gli2	ENSMUST00000115230.2|Apod|ENSMUSG00000022548.15|apolipoprotein D	ENSMUST00000130560.8|Apod|ENSMUSG00000022548.15|apolipoprotein D
mm39_v1_chr6_-_124441731_124441753	0.337718	Gli2	ENSMUST00000008297.5|Clstn3|ENSMUSG00000008153.13|calsyntenin 3
mm39_v1_chr1_-_119924920_119924980	0.335051	Gli2	ENSMUST00000174370.8|Cfap221|ENSMUSG00000036962.13|cilia and flagella associated protein 221	ENSMUST00000174458.2|Cfap221|ENSMUSG00000036962.13|cilia and flagella associated protein 221
mm39_v1_chr8_+_71207326_71207400	0.33338	Gli2	ENSMUST00000110093.9|Rab3a|ENSMUSG00000031840.15|RAB3A, member RAS oncogene family	ENSMUST00000143118.3|Rab3a|ENSMUSG00000031840.15|RAB3A, member RAS oncogene family	ENSMUST00000034301.12|Rab3a|ENSMUSG00000031840.15|RAB3A, member RAS oncogene family	ENSMUST00000110090.8|Rab3a|ENSMUSG00000031840.15|RAB3A, member RAS oncogene family
mm39_v1_chr11_+_70453724_70453748	0.324887	Gli2	ENSMUST00000102559.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr8_+_27937691_27937709	0.323246	Gli2	ENSMUST00000081321.5|Poteg|ENSMUSG00000063932.6|POTE ankyrin domain family, member G
mm39_v1_chr7_+_44813363_44813448	0.322145	Gli2	ENSMUST00000085374.7|Slc17a7|ENSMUSG00000070570.6|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	ENSMUST00000209634.2|Slc17a7|ENSMUSG00000070570.6|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7
mm39_v1_chr11_-_68762664_68762701	0.31605	Gli2	ENSMUST00000101017.9|Ndel1|ENSMUSG00000018736.15|nudE neurodevelopment protein 1 like 1
mm39_v1_chr2_+_121786444_121786498	0.308314	Gli2	ENSMUST00000036647.13|Ctdspl2|ENSMUSG00000033411.17|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
mm39_v1_chr4_-_126150066_126150163	0.304173	Gli2	ENSMUST00000122129.8|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000061143.15|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1	ENSMUST00000106132.3|Map7d1|ENSMUSG00000028849.18|MAP7 domain containing 1
mm39_v1_chr7_+_130294262_130294305	0.292243	Gli2	ENSMUST00000033141.7|Tacc2|ENSMUSG00000030852.19|transforming, acidic coiled-coil containing protein 2
mm39_v1_chrX_-_95000496_95000561	0.291117	Gli2	ENSMUST00000079987.13|Las1l|ENSMUSG00000057421.13|LAS1-like (S. cerevisiae)	ENSMUST00000113864.3|Las1l|ENSMUSG00000057421.13|LAS1-like (S. cerevisiae)
mm39_v1_chr10_-_128727542_128727587	0.289543	Gli2	ENSMUST00000026408.7|Gdf11|ENSMUSG00000025352.7|growth differentiation factor 11
mm39_v1_chr7_+_140908033_140908097	0.279178	Gli2	ENSMUST00000133012.8|Tmem80|ENSMUSG00000025505.17|transmembrane protein 80	ENSMUST00000026578.14|Tmem80|ENSMUSG00000025505.17|transmembrane protein 80
mm39_v1_chr11_+_117198958_117199010	0.258319	Gli2	ENSMUST00000153668.8|Septin9|ENSMUSG00000059248.14|septin 9
mm39_v1_chr2_-_104542467_104542525	0.253078	Gli2	ENSMUST00000111118.8|Tcp11l1|ENSMUSG00000027175.11|t-complex 11 like 1	ENSMUST00000028597.4|Tcp11l1|ENSMUSG00000027175.11|t-complex 11 like 1
mm39_v1_chr5_-_71253107_71253206	0.25278	Gli2	ENSMUST00000197284.5|Gabra2|ENSMUSG00000000560.10|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 2
mm39_v1_chr5_+_147206769_147206912	0.24492	Gli2	ENSMUST00000085591.7|Pdx1|ENSMUSG00000029644.8|pancreatic and duodenal homeobox 1
mm39_v1_chr17_-_84495364_84495381	0.243478	Gli2	ENSMUST00000060366.7|Zfp36l2|ENSMUSG00000045817.9|zinc finger protein 36, C3H type-like 2
mm39_v1_chr11_+_70453806_70453896	0.238524	Gli2	ENSMUST00000079244.12|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)	ENSMUST00000102558.11|Mink1|ENSMUSG00000020827.19|misshapen-like kinase 1 (zebrafish)
mm39_v1_chr6_-_38614155_38614184	0.237285	Gli2	ENSMUST00000096030.7|Klrg2|ENSMUSG00000071537.7|killer cell lectin-like receptor subfamily G, member 2	ENSMUST00000201345.2|Klrg2|ENSMUSG00000071537.7|killer cell lectin-like receptor subfamily G, member 2
mm39_v1_chr17_-_52139693_52139706	0.228782	Gli2	ENSMUST00000144331.8|Satb1|ENSMUSG00000023927.16|special AT-rich sequence binding protein 1
mm39_v1_chr2_+_74566740_74566859	0.227979	Gli2	ENSMUST00000111982.8|Hoxd3|ENSMUSG00000079277.10|homeobox D3
mm39_v1_chr14_-_55354392_55354437	0.212657	Gli2	ENSMUST00000022819.13|Jph4|ENSMUSG00000022208.13|junctophilin 4
mm39_v1_chr5_+_73563418_73563611	0.197103	Gli2	ENSMUST00000031040.13|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog	ENSMUST00000065543.8|Cwh43|ENSMUSG00000029154.14|cell wall biogenesis 43 C-terminal homolog
mm39_v1_chr4_-_135699205_135699240	0.192047	Gli2	ENSMUST00000105852.8|Lypla2|ENSMUSG00000028670.15|lysophospholipase 2
mm39_v1_chr4_+_63133639_63133672	0.181616	Gli2	ENSMUST00000036300.13|Col27a1|ENSMUSG00000045672.16|collagen, type XXVII, alpha 1
mm39_v1_chr7_-_132725075_132725107	0.178867	Gli2	ENSMUST00000163601.8|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2	ENSMUST00000124096.8|Fgfr2|ENSMUSG00000030849.19|fibroblast growth factor receptor 2	ENSMUST00000033269.15|Ctbp2|ENSMUSG00000030970.17|C-terminal binding protein 2
mm39_v1_chrX_+_99773784_99773795	0.175868	Gli2	ENSMUST00000113744.2|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chr1_-_72576089_72576158	0.175462	Gli2	ENSMUST00000047786.6|Marchf4|ENSMUSG00000039372.6|membrane associated ring-CH-type finger 4
mm39_v1_chr4_+_116953218_116953280	0.15303	Gli2	ENSMUST00000030443.12|Ptch2|ENSMUSG00000028681.12|patched 2
mm39_v1_chr18_+_38383297_38383340	0.122411	Gli2	ENSMUST00000025314.7|Dele1|ENSMUSG00000024442.7|DAP3 binding cell death enhancer 1	ENSMUST00000236078.2|Dele1|ENSMUSG00000024442.7|DAP3 binding cell death enhancer 1
mm39_v1_chr9_+_107805647_107805684	0.120923	Gli2	ENSMUST00000085073.2|Actl11|ENSMUSG00000066368.2|actin-like 11
mm39_v1_chr2_-_120439764_120439798	0.106975	Gli2	ENSMUST00000102496.8|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57
mm39_v1_chr11_-_41891359_41891421	0.0955365	Gli2	ENSMUST00000070735.10|Gabrg2|ENSMUSG00000020436.18|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm39_v1_chr2_-_120439981_120440005	0.0939499	Gli2	ENSMUST00000133612.2|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57	ENSMUST00000102498.8|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57	ENSMUST00000102499.8|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57
mm39_v1_chr9_+_24009292_24009314	0.0859698	Gli2	ENSMUST00000133787.8|Npsr1|ENSMUSG00000043659.12|neuropeptide S receptor 1	ENSMUST00000059650.11|Npsr1|ENSMUSG00000043659.12|neuropeptide S receptor 1
mm39_v1_chr16_+_3648742_3648762	0.0832642	Gli2	ENSMUST00000214238.2|Olfr15|ENSMUSG00000059043.3|olfactory receptor 15	ENSMUST00000214590.2|Olfr15|ENSMUSG00000059043.3|olfactory receptor 15
mm39_v1_chr2_-_120439826_120439860	0.0755252	Gli2	ENSMUST00000102497.10|Lrrc57|ENSMUSG00000027286.17|leucine rich repeat containing 57
mm39_v1_chr12_+_38830283_38830348	0.0689372	Gli2	ENSMUST00000162563.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000161164.8|Etv1|ENSMUSG00000004151.18|ets variant 1	ENSMUST00000160996.8|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr1_+_55127110_55127291	0.0582527	Gli2	ENSMUST00000075242.7|Hspe1|ENSMUSG00000073676.5|heat shock protein 1 (chaperonin 10)
mm39_v1_chr9_+_20943350_20943381	0.0527528	Gli2	ENSMUST00000019616.6|Icam5|ENSMUSG00000032174.6|intercellular adhesion molecule 5, telencephalin
mm39_v1_chrX_+_99773523_99773567	0.046252	Gli2	ENSMUST00000019503.14|Gdpd2|ENSMUSG00000019359.15|glycerophosphodiester phosphodiesterase domain containing 2
mm39_v1_chr4_+_155915729_155915808	0.0428254	Gli2	ENSMUST00000139651.8|Aurkaip1|ENSMUSG00000065990.13|aurora kinase A interacting protein 1	ENSMUST00000084097.12|Aurkaip1|ENSMUSG00000065990.13|aurora kinase A interacting protein 1
mm39_v1_chr1_+_97697881_97697935	0.0397114	Gli2	ENSMUST00000112844.10|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000112842.8|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1	ENSMUST00000027571.13|Gin1|ENSMUSG00000026333.15|gypsy retrotransposon integrase 1
mm39_v1_chr4_+_134879807_134879865	0.0328493	Gli2	ENSMUST00000119564.2|Runx3|ENSMUSG00000070691.11|runt related transcription factor 3
mm39_v1_chr9_-_69668204_69668222	0.0300404	Gli2	ENSMUST00000071281.5|Foxb1|ENSMUSG00000059246.5|forkhead box B1
mm39_v1_chr4_+_40472180_40472180	0.01753	Gli2	ENSMUST00000049655.3|Tmem215|ENSMUSG00000046593.4|transmembrane protein 215
mm39_v1_chr2_+_71042050_71042138	0.00693669	Gli2	ENSMUST00000112142.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112139.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112140.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2	ENSMUST00000112138.8|Dync1i2|ENSMUSG00000027012.16|dynein cytoplasmic 1 intermediate chain 2
mm39_v1_chr11_-_118800314_118800398	0.00340986	Gli2	ENSMUST00000117731.8|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000106278.9|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000120061.8|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3	ENSMUST00000017576.11|Rbfox3|ENSMUSG00000025576.18|RNA binding protein, fox-1 homolog (C. elegans) 3
mm39_v1_chr17_-_24851549_24851577	0.00292573	Gli2	ENSMUST00000227607.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2	ENSMUST00000227509.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2	ENSMUST00000227745.2|Tsc2|ENSMUSG00000002496.11|TSC complex subunit 2
