mm39_v1_chr4_-_87724533_87724562	1.75638	Foxq1	ENSMUST00000126353.8|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3	ENSMUST00000149357.8|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr7_+_110371811_110371962	1.57062	Foxq1	ENSMUST00000005829.13|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr4_-_87724512_87724531	1.38465	Foxq1	ENSMUST00000148059.2|Mllt3|ENSMUSG00000028496.18|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3
mm39_v1_chr3_+_129326004_129326089	1.34961	Foxq1	ENSMUST00000199910.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000197070.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)	ENSMUST00000071402.7|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr10_+_115653152_115653229	1.12977	Foxq1	ENSMUST00000080630.11|Tspan8|ENSMUSG00000034127.16|tetraspanin 8	ENSMUST00000179196.3|Tspan8|ENSMUSG00000034127.16|tetraspanin 8	ENSMUST00000035563.15|Tspan8|ENSMUSG00000034127.16|tetraspanin 8
mm39_v1_chr3_+_135531409_135531425	0.862145	Foxq1	ENSMUST00000180196.8|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr14_+_26722319_26722463	0.860638	Foxq1	ENSMUST00000035433.10|Hesx1|ENSMUSG00000040726.11|homeobox gene expressed in ES cells
mm39_v1_chr11_-_82719850_82719869	0.683183	Foxq1	ENSMUST00000021036.13|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000074515.11|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein	ENSMUST00000103218.3|Rffl|ENSMUSG00000020696.19|ring finger and FYVE like domain containing protein
mm39_v1_chr18_+_11790409_11790561	0.578458	Foxq1	ENSMUST00000047322.8|Rbbp8|ENSMUSG00000041238.17|retinoblastoma binding protein 8, endonuclease
mm39_v1_chr15_+_102368510_102368560	0.567038	Foxq1	ENSMUST00000164688.2|Prr13|ENSMUSG00000023048.14|proline rich 13
mm39_v1_chr1_+_51328265_51328301	0.553606	Foxq1	ENSMUST00000051572.8|Cavin2|ENSMUSG00000045954.8|caveolae associated 2
mm39_v1_chr7_+_78563513_78563612	0.55064	Foxq1	ENSMUST00000038142.15|Isg20|ENSMUSG00000039236.19|interferon-stimulated protein
mm39_v1_chr6_+_42241916_42241968	0.550255	Foxq1	ENSMUST00000031895.13|Casp2|ENSMUSG00000029863.14|caspase 2
mm39_v1_chr9_-_100388857_100388909	0.53667	Foxq1	ENSMUST00000112874.4|Nck1|ENSMUSG00000032475.16|non-catalytic region of tyrosine kinase adaptor protein 1
mm39_v1_chr1_+_134343107_134343146	0.531669	Foxq1	ENSMUST00000027727.15|Adipor1|ENSMUSG00000026457.15|adiponectin receptor 1
mm39_v1_chr1_+_134343152_134343242	0.531643	Foxq1	ENSMUST00000112237.2|Adipor1|ENSMUSG00000026457.15|adiponectin receptor 1
mm39_v1_chr9_+_56344700_56344741	0.524437	Foxq1	ENSMUST00000239472.2|ENSMUSG00000118653.2|ENSMUSG00000118653.2|ubiquitin-conjugating enzyme E2S (Ube2s) retrogene
mm39_v1_chr2_-_163486998_163487064	0.514069	Foxq1	ENSMUST00000017851.4|Serinc3|ENSMUSG00000017707.10|serine incorporator 3
mm39_v1_chr9_-_105398346_105398464	0.501214	Foxq1	ENSMUST00000176770.8|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering	ENSMUST00000085133.13|Atp2c1|ENSMUSG00000032570.18|ATPase, Ca++-sequestering
mm39_v1_chr13_-_59930059_59930059	0.495274	Foxq1	ENSMUST00000225581.2|Gm49354|ENSMUSG00000114763.2|predicted gene, 49354
mm39_v1_chr15_+_54274151_54274193	0.495129	Foxq1	ENSMUST00000036737.4|Colec10|ENSMUSG00000038591.4|collectin sub-family member 10
mm39_v1_chr19_+_45433899_45433982	0.485087	Foxq1	ENSMUST00000224478.2|Btrc|ENSMUSG00000025217.16|beta-transducin repeat containing protein
mm39_v1_chr10_-_116385007_116385068	0.4744	Foxq1	ENSMUST00000164088.8|Cnot2|ENSMUSG00000020166.16|CCR4-NOT transcription complex, subunit 2
mm39_v1_chr11_-_62283431_62283485	0.472199	Foxq1	ENSMUST00000151498.9|Ncor1|ENSMUSG00000018501.18|nuclear receptor co-repressor 1
mm39_v1_chr12_+_71936500_71936514	0.463699	Foxq1	ENSMUST00000221317.2|Daam1|ENSMUSG00000034574.11|dishevelled associated activator of morphogenesis 1
mm39_v1_chr7_+_79836581_79836651	0.450683	Foxq1	ENSMUST00000032754.9|Sema4b|ENSMUSG00000030539.14|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B
mm39_v1_chr5_-_115236354_115236354	0.448819	Foxq1	ENSMUST00000100848.3|Gm10401|ENSMUSG00000072693.3|predicted gene 10401
mm39_v1_chr3_+_129326285_129326376	0.436915	Foxq1	ENSMUST00000197235.5|Elovl6|ENSMUSG00000041220.11|ELOVL family member 6, elongation of long chain fatty acids (yeast)
mm39_v1_chr8_-_54091980_54092100	0.428461	Foxq1	ENSMUST00000047768.11|Neil3|ENSMUSG00000039396.12|nei like 3 (E. coli)
mm39_v1_chr5_+_67473069_67473149	0.387622	Foxq1	ENSMUST00000202770.2|Slc30a9|ENSMUSG00000029221.16|solute carrier family 30 (zinc transporter), member 9
mm39_v1_chr4_+_109200225_109200278	0.387508	Foxq1	ENSMUST00000030281.12|Eps15|ENSMUSG00000028552.14|epidermal growth factor receptor pathway substrate 15
mm39_v1_chr6_+_58573656_58573695	0.386639	Foxq1	ENSMUST00000031822.13|Abcg2|ENSMUSG00000029802.14|ATP binding cassette subfamily G member 2 (Junior blood group)
mm39_v1_chr12_-_101924407_101924505	0.380117	Foxq1	ENSMUST00000159883.2|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000160251.8|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000161011.8|Atxn3|ENSMUSG00000021189.12|ataxin 3	ENSMUST00000021606.12|Atxn3|ENSMUSG00000021189.12|ataxin 3
mm39_v1_chr7_+_35148188_35148227	0.366223	Foxq1	ENSMUST00000118383.8|Slc7a9|ENSMUSG00000030492.17|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm39_v1_chr7_+_35148461_35148474	0.360412	Foxq1	ENSMUST00000118969.8|Slc7a9|ENSMUSG00000030492.17|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm39_v1_chr12_-_4957212_4957274	0.350858	Foxq1	ENSMUST00000142867.8|Ubxn2a|ENSMUSG00000020634.13|UBX domain protein 2A
mm39_v1_chr7_+_35148579_35148595	0.334589	Foxq1	ENSMUST00000032703.10|Slc7a9|ENSMUSG00000030492.17|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm39_v1_chrX_+_138464065_138464088	0.327182	Foxq1	ENSMUST00000113027.8|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr10_+_87926932_87926939	0.325163	Foxq1	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr5_-_138169253_138169296	0.318784	Foxq1	ENSMUST00000139983.8|Mcm7|ENSMUSG00000029730.17|minichromosome maintenance complex component 7
mm39_v1_chr6_+_128376729_128376788	0.309664	Foxq1	ENSMUST00000001561.12|Nrip2|ENSMUSG00000001520.13|nuclear receptor interacting protein 2
mm39_v1_chr10_-_5144699_5144765	0.304074	Foxq1	ENSMUST00000215467.2|Syne1|ENSMUSG00000096054.4|spectrin repeat containing, nuclear envelope 1
mm39_v1_chrX_-_9335525_9335571	0.298874	Foxq1	ENSMUST00000015484.10|Cybb|ENSMUSG00000015340.11|cytochrome b-245, beta polypeptide
mm39_v1_chr2_+_60040231_60040288	0.298796	Foxq1	ENSMUST00000102748.11|Marchf7|ENSMUSG00000026977.18|membrane associated ring-CH-type finger 7
mm39_v1_chr2_-_51039112_51039127	0.291891	Foxq1	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr1_-_136273811_136273884	0.284125	Foxq1	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr1_-_82746169_82746186	0.274007	Foxq1	ENSMUST00000027331.3|Tm4sf20|ENSMUSG00000026149.3|transmembrane 4 L six family member 20
mm39_v1_chr18_+_51250748_51250822	0.274004	Foxq1	ENSMUST00000116639.4|Prr16|ENSMUSG00000073565.6|proline rich 16
mm39_v1_chr18_+_13107535_13107731	0.269195	Foxq1	ENSMUST00000234035.2|Impact|ENSMUSG00000024423.7|impact, RWD domain protein	ENSMUST00000235053.2|Impact|ENSMUSG00000024423.7|impact, RWD domain protein
mm39_v1_chr9_+_108437485_108437650	0.265369	Foxq1	ENSMUST00000081111.14|Impdh2|ENSMUSG00000062867.14|inosine monophosphate dehydrogenase 2	ENSMUST00000193421.2|Impdh2|ENSMUSG00000062867.14|inosine monophosphate dehydrogenase 2
mm39_v1_chr15_-_12549963_12549995	0.263601	Foxq1	ENSMUST00000189324.2|Pdzd2|ENSMUSG00000022197.17|PDZ domain containing 2
mm39_v1_chr4_+_132366298_132366430	0.248018	Foxq1	ENSMUST00000135299.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000020197.14|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000180250.8|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000081726.13|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3	ENSMUST00000079157.11|Eya3|ENSMUSG00000028886.16|EYA transcriptional coactivator and phosphatase 3
mm39_v1_chr12_-_91745903_91745918	0.24637	Foxq1	ENSMUST00000170077.2|Ston2|ENSMUSG00000020961.16|stonin 2
mm39_v1_chr8_+_46111703_46111764	0.245382	Foxq1	ENSMUST00000134675.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000139869.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000126067.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr2_-_25498459_25498533	0.244574	Foxq1	ENSMUST00000058137.9|Rabl6|ENSMUSG00000015087.15|RAB, member RAS oncogene family-like 6
mm39_v1_chr2_-_37537224_37537297	0.242564	Foxq1	ENSMUST00000028279.10|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr6_+_128376844_128376933	0.242326	Foxq1	ENSMUST00000120405.4|Nrip2|ENSMUSG00000001520.13|nuclear receptor interacting protein 2
mm39_v1_chr1_+_43137852_43137871	0.242219	Foxq1	ENSMUST00000010434.8|AI597479|ENSMUSG00000010290.8|expressed sequence AI597479
mm39_v1_chr11_-_45845992_45846020	0.235462	Foxq1	ENSMUST00000109254.2|Thg1l|ENSMUSG00000011254.17|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm39_v1_chr19_-_29721012_29721012	0.231055	Foxq1	ENSMUST00000175764.9|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr2_-_37593287_37593302	0.226658	Foxq1	ENSMUST00000072186.12|Strbp|ENSMUSG00000026915.17|spermatid perinuclear RNA binding protein
mm39_v1_chr5_-_130284366_130284379	0.226034	Foxq1	ENSMUST00000026387.11|Sbds|ENSMUSG00000025337.11|SBDS ribosome maturation factor
mm39_v1_chrX_+_162694397_162694435	0.225775	Foxq1	ENSMUST00000140845.2|Ap1s2|ENSMUSG00000031367.16|adaptor-related protein complex 1, sigma 2 subunit
mm39_v1_chr8_+_46111778_46111841	0.224661	Foxq1	ENSMUST00000143820.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr13_+_94954202_94954242	0.21412	Foxq1	ENSMUST00000220825.2|Tbca|ENSMUSG00000042043.7|tubulin cofactor A
mm39_v1_chr18_-_88945571_88945605	0.213311	Foxq1	ENSMUST00000147313.2|Socs6|ENSMUSG00000056153.16|suppressor of cytokine signaling 6
mm39_v1_chr2_-_84652890_84652996	0.210282	Foxq1	ENSMUST00000028471.6|Smtnl1|ENSMUSG00000027077.8|smoothelin-like 1
mm39_v1_chr6_+_136530970_136531002	0.205713	Foxq1	ENSMUST00000189535.2|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr1_-_44140820_44140833	0.203672	Foxq1	ENSMUST00000152239.8|Tex30|ENSMUSG00000026049.12|testis expressed 30
mm39_v1_chr2_-_87868043_87868043	0.200909	Foxq1	ENSMUST00000129056.3|Olfr73|ENSMUSG00000075140.5|olfactory receptor 73
mm39_v1_chr17_+_19724994_19725062	0.195372	Foxq1	ENSMUST00000166081.3|Vmn2r100|ENSMUSG00000091859.3|vomeronasal 2, receptor 100	ENSMUST00000231465.2|Vmn2r100|ENSMUSG00000091859.3|vomeronasal 2, receptor 100
mm39_v1_chr1_+_87332638_87332686	0.19261	Foxq1	ENSMUST00000173152.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2	ENSMUST00000173663.2|Gigyf2|ENSMUSG00000048000.16|GRB10 interacting GYF protein 2
mm39_v1_chr4_-_131565542_131565603	0.189674	Foxq1	ENSMUST00000030741.9|Ptpru|ENSMUSG00000028909.18|protein tyrosine phosphatase, receptor type, U	ENSMUST00000105987.9|Ptpru|ENSMUSG00000028909.18|protein tyrosine phosphatase, receptor type, U
mm39_v1_chr2_-_77349909_77349991	0.187441	Foxq1	ENSMUST00000111830.9|Zfp385b|ENSMUSG00000027016.18|zinc finger protein 385B
mm39_v1_chr17_-_34337446_34337475	0.187111	Foxq1	ENSMUST00000095347.13|Brd2|ENSMUSG00000024335.21|bromodomain containing 2
mm39_v1_chr4_-_43584386_43584494	0.184678	Foxq1	ENSMUST00000107884.3|Msmp|ENSMUSG00000078719.3|microseminoprotein, prostate associated
mm39_v1_chr14_-_9015639_9015752	0.180656	Foxq1	ENSMUST00000112656.4|Synpr|ENSMUSG00000056296.18|synaptoporin
mm39_v1_chr12_+_25024913_25024992	0.178488	Foxq1	ENSMUST00000066652.7|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000220459.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220	ENSMUST00000222941.2|Kidins220|ENSMUSG00000036333.12|kinase D-interacting substrate 220
mm39_v1_chr2_+_87853118_87853118	0.172181	Foxq1	ENSMUST00000214438.2|Olfr1161|ENSMUSG00000045150.6|olfactory receptor 1161
mm39_v1_chr12_-_85317359_85317430	0.171752	Foxq1	ENSMUST00000166821.8|Mlh3|ENSMUSG00000021245.16|mutL homolog 3	ENSMUST00000019378.8|Mlh3|ENSMUSG00000021245.16|mutL homolog 3	ENSMUST00000220854.2|Mlh3|ENSMUSG00000021245.16|mutL homolog 3
mm39_v1_chr17_+_18269686_18269686	0.168952	Foxq1	ENSMUST00000176802.3|Vmn2r124|ENSMUSG00000094396.4|vomeronasal 2, receptor 124
mm39_v1_chr3_+_68491487_68491514	0.168835	Foxq1	ENSMUST00000182997.3|Schip1|ENSMUSG00000027777.16|schwannomin interacting protein 1
mm39_v1_chr7_+_16807965_16808014	0.165597	Foxq1	ENSMUST00000071399.13|Psg16|ENSMUSG00000066760.13|pregnancy specific glycoprotein 16	ENSMUST00000118367.3|Psg16|ENSMUSG00000066760.13|pregnancy specific glycoprotein 16
mm39_v1_chr16_-_88360037_88360088	0.161839	Foxq1	ENSMUST00000049697.5|Cldn8|ENSMUSG00000050520.5|claudin 8
mm39_v1_chr13_+_28441511_28441583	0.158115	Foxq1	ENSMUST00000223428.2|Rps18-ps5|ENSMUSG00000113061.2|ribosomal protein S18, pseudogene 5
mm39_v1_chr19_-_45619559_45619597	0.157403	Foxq1	ENSMUST00000160718.9|Fbxw4|ENSMUSG00000040913.12|F-box and WD-40 domain protein 4
mm39_v1_chr2_+_60040291_60040417	0.155528	Foxq1	ENSMUST00000102747.8|Marchf7|ENSMUSG00000026977.18|membrane associated ring-CH-type finger 7
mm39_v1_chr2_-_181223787_181223801	0.15342	Foxq1	ENSMUST00000057816.15|Uckl1|ENSMUSG00000089917.8|uridine-cytidine kinase 1-like 1
mm39_v1_chr4_-_129015682_129015856	0.152973	Foxq1	ENSMUST00000139450.8|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000125931.9|Hpca|ENSMUSG00000028785.14|hippocalcin	ENSMUST00000116444.10|Hpca|ENSMUSG00000028785.14|hippocalcin
mm39_v1_chr16_+_43184507_43184567	0.151363	Foxq1	ENSMUST00000148775.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chr15_-_55411560_55411560	0.150381	Foxq1	ENSMUST00000165356.2|Mrpl13|ENSMUSG00000022370.14|mitochondrial ribosomal protein L13
mm39_v1_chr8_-_34574970_34575006	0.149093	Foxq1	ENSMUST00000118811.8|Dctn6|ENSMUSG00000031516.12|dynactin 6
mm39_v1_chr14_-_50380137_50380137	0.146404	Foxq1	ENSMUST00000213685.2|Olfr728|ENSMUSG00000050030.6|olfactory receptor 728
mm39_v1_chrX_-_69408627_69408718	0.146258	Foxq1	ENSMUST00000101509.9|Ids|ENSMUSG00000035847.16|iduronate 2-sulfatase
mm39_v1_chr13_+_23715220_23715265	0.142575	Foxq1	ENSMUST00000102972.6|H4c8|ENSMUSG00000060981.8|H4 clustered histone 8
mm39_v1_chr16_+_5703134_5703219	0.1423	Foxq1	ENSMUST00000230658.2|Rbfox1|ENSMUSG00000008658.17|RNA binding protein, fox-1 homolog (C. elegans) 1
mm39_v1_chr15_-_50746202_50746218	0.141933	Foxq1	ENSMUST00000184885.8|Trps1|ENSMUSG00000038679.17|transcriptional repressor GATA binding 1
mm39_v1_chr5_+_102629365_102629425	0.141597	Foxq1	ENSMUST00000112854.8|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24
mm39_v1_chr2_-_45000389_45000766	0.137847	Foxq1	ENSMUST00000201804.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000028229.13|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000202187.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000153561.6|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000201490.2|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr6_+_103487541_103487551	0.137136	Foxq1	ENSMUST00000203912.3|Chl1|ENSMUSG00000030077.12|cell adhesion molecule L1-like
mm39_v1_chr11_-_99511257_99511262	0.136146	Foxq1	ENSMUST00000073853.3|Gm11562|ENSMUSG00000062278.3|predicted gene 11562
mm39_v1_chr16_-_78887971_78887995	0.132353	Foxq1	ENSMUST00000023566.11|Tmprss15|ENSMUSG00000022857.14|transmembrane protease, serine 15	ENSMUST00000060402.6|Tmprss15|ENSMUSG00000022857.14|transmembrane protease, serine 15
mm39_v1_chr18_+_37622518_37622518	0.130754	Foxq1	ENSMUST00000055949.4|Pcdhb18|ENSMUSG00000048347.6|protocadherin beta 18
mm39_v1_chr9_-_112016834_112016930	0.128377	Foxq1	ENSMUST00000111872.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21	ENSMUST00000164754.9|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21
mm39_v1_chr18_+_37100672_37100704	0.125824	Foxq1	ENSMUST00000193777.6|Pcdha6|ENSMUSG00000103707.6|protocadherin alpha 6	ENSMUST00000193389.2|Pcdha6|ENSMUSG00000103707.6|protocadherin alpha 6
mm39_v1_chr11_+_99770013_99770013	0.119372	Foxq1	ENSMUST00000078442.4|Gm11567|ENSMUSG00000059845.6|predicted gene 11567
mm39_v1_chr4_+_108704982_108705092	0.11446	Foxq1	ENSMUST00000102738.4|Kti12|ENSMUSG00000073775.5|KTI12 homolog, chromatin associated
mm39_v1_chr1_-_132635042_132635064	0.113387	Foxq1	ENSMUST00000043189.14|Nfasc|ENSMUSG00000026442.15|neurofascin
mm39_v1_chr3_+_31150982_31151003	0.112414	Foxq1	ENSMUST00000118204.2|Skil|ENSMUSG00000027660.17|SKI-like
mm39_v1_chr10_+_69761784_69761963	0.112139	Foxq1	ENSMUST00000181974.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182795.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial	ENSMUST00000182437.8|Ank3|ENSMUSG00000069601.15|ankyrin 3, epithelial
mm39_v1_chr12_+_33364288_33364326	0.111103	Foxq1	ENSMUST00000144586.2|Atxn7l1|ENSMUSG00000020564.18|ataxin 7-like 1
mm39_v1_chr4_-_3872105_3872105	0.108513	Foxq1	ENSMUST00000105158.2|Mos|ENSMUSG00000078365.6|Moloney sarcoma oncogene
mm39_v1_chr16_+_91188609_91188657	0.108102	Foxq1	ENSMUST00000160764.2|Gm21970|ENSMUSG00000093701.8|predicted gene 21970
mm39_v1_chr6_-_53955647_53955656	0.105814	Foxq1	ENSMUST00000204674.3|Cpvl|ENSMUSG00000052955.6|carboxypeptidase, vitellogenic-like	ENSMUST00000166545.2|Cpvl|ENSMUSG00000052955.6|carboxypeptidase, vitellogenic-like	ENSMUST00000203101.3|Cpvl|ENSMUSG00000052955.6|carboxypeptidase, vitellogenic-like
mm39_v1_chr8_+_79236051_79236204	0.105269	Foxq1	ENSMUST00000209992.2|Slc10a7|ENSMUSG00000031684.12|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm39_v1_chr4_+_109092459_109092459	0.105057	Foxq1	ENSMUST00000106631.9|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr4_+_109092610_109092610	0.102104	Foxq1	ENSMUST00000106628.8|Calr4|ENSMUSG00000028558.15|calreticulin 4
mm39_v1_chr2_-_7400690_7400735	0.100916	Foxq1	ENSMUST00000182404.8|Celf2|ENSMUSG00000002107.19|CUGBP, Elav-like family member 2
mm39_v1_chr1_-_132635078_132635144	0.100882	Foxq1	ENSMUST00000187861.7|Nfasc|ENSMUSG00000026442.15|neurofascin
mm39_v1_chr2_+_109522781_109522889	0.0978942	Foxq1	ENSMUST00000111050.10|Bdnf|ENSMUSG00000048482.15|brain derived neurotrophic factor
mm39_v1_chr17_+_30845909_30845965	0.0967581	Foxq1	ENSMUST00000236140.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000236118.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8	ENSMUST00000235390.2|Dnah8|ENSMUSG00000033826.11|dynein, axonemal, heavy chain 8
mm39_v1_chr1_-_43235914_43235928	0.0965886	Foxq1	ENSMUST00000187357.2|Fhl2|ENSMUSG00000008136.15|four and a half LIM domains 2
mm39_v1_chr8_-_3904309_3904309	0.0946833	Foxq1	ENSMUST00000033888.5|Cd209e|ENSMUSG00000040197.5|CD209e antigen
mm39_v1_chr6_+_88199250_88199278	0.0916813	Foxq1	ENSMUST00000061866.6|Dnajb8|ENSMUSG00000048206.7|DnaJ heat shock protein family (Hsp40) member B8
mm39_v1_chr14_-_54651442_54651542	0.0904596	Foxq1	ENSMUST00000227334.2|Slc7a7|ENSMUSG00000000958.11|solute carrier family 7 (cationic amino acid transporter, y+ system), member 7
mm39_v1_chr1_-_82748964_82749031	0.0898331	Foxq1	ENSMUST00000223838.2|Gm47791|ENSMUSG00000114299.2|predicted gene, 47791
mm39_v1_chr14_+_53698556_53698556	0.0896313	Foxq1	ENSMUST00000181728.3|Trav7-4|ENSMUSG00000094766.4|T cell receptor alpha variable 7-4
mm39_v1_chr15_-_12549350_12549369	0.0878604	Foxq1	ENSMUST00000190929.2|Pdzd2|ENSMUSG00000022197.17|PDZ domain containing 2
mm39_v1_chr18_+_57601541_57601614	0.0878565	Foxq1	ENSMUST00000091892.4|Ctxn3|ENSMUSG00000069372.4|cortexin 3	ENSMUST00000209782.2|Ctxn3|ENSMUSG00000069372.4|cortexin 3
mm39_v1_chr3_-_64252048_64252048	0.0859042	Foxq1	ENSMUST00000234658.2|Vmn2r128|ENSMUSG00000091967.6|vomeronasal 2 receptor 128
mm39_v1_chr4_-_45532470_45532470	0.0848219	Foxq1	ENSMUST00000147448.2|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr17_-_30845845_30845879	0.0843335	Foxq1	ENSMUST00000235547.2|Glo1|ENSMUSG00000024026.14|glyoxalase 1	ENSMUST00000188852.2|1700097N02Rik|ENSMUSG00000099474.2|RIKEN cDNA 1700097N02 gene
mm39_v1_chr1_-_169938298_169938393	0.084298	Foxq1	ENSMUST00000192312.6|Ddr2|ENSMUSG00000026674.10|discoidin domain receptor family, member 2
mm39_v1_chr3_+_53396120_53396148	0.0839549	Foxq1	ENSMUST00000029307.4|Stoml3|ENSMUSG00000027744.5|stomatin (Epb7.2)-like 3
mm39_v1_chr19_-_36896999_36897023	0.0839374	Foxq1	ENSMUST00000238948.2|Fgfbp3|ENSMUSG00000047632.12|fibroblast growth factor binding protein 3	ENSMUST00000057337.9|Fgfbp3|ENSMUSG00000047632.12|fibroblast growth factor binding protein 3
mm39_v1_chr1_-_169938060_169938130	0.0816684	Foxq1	ENSMUST00000027985.8|Ddr2|ENSMUSG00000026674.10|discoidin domain receptor family, member 2	ENSMUST00000194690.6|Ddr2|ENSMUSG00000026674.10|discoidin domain receptor family, member 2
mm39_v1_chr3_-_108062172_108062223	0.0801134	Foxq1	ENSMUST00000062028.8|Gpr61|ENSMUSG00000046793.9|G protein-coupled receptor 61
mm39_v1_chr16_-_59138611_59138611	0.0799564	Foxq1	ENSMUST00000216261.2|Olfr204|ENSMUSG00000095928.4|olfactory receptor 204
mm39_v1_chr10_+_80591030_80591073	0.0781364	Foxq1	ENSMUST00000105336.9|Dot1l|ENSMUSG00000061589.15|DOT1-like, histone H3 methyltransferase (S. cerevisiae)
mm39_v1_chr6_+_97968737_97968882	0.0762346	Foxq1	ENSMUST00000043628.13|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000203938.2|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr2_-_87985537_87985537	0.0749974	Foxq1	ENSMUST00000216951.2|Olfr1167|ENSMUSG00000100899.3|olfactory receptor 1167
mm39_v1_chr17_+_12803019_12803082	0.0746664	Foxq1	ENSMUST00000046959.9|Slc22a2|ENSMUSG00000040966.11|solute carrier family 22 (organic cation transporter), member 2	ENSMUST00000233066.2|Slc22a2|ENSMUSG00000040966.11|solute carrier family 22 (organic cation transporter), member 2
mm39_v1_chr9_-_39486831_39486865	0.0745028	Foxq1	ENSMUST00000216298.2|Olfr959|ENSMUSG00000059366.4|olfactory receptor 959	ENSMUST00000215194.2|Olfr959|ENSMUSG00000059366.4|olfactory receptor 959
mm39_v1_chr6_+_36364990_36365019	0.0725833	Foxq1	ENSMUST00000172278.8|Chrm2|ENSMUSG00000045613.10|cholinergic receptor, muscarinic 2, cardiac
mm39_v1_chr9_-_118917275_118917348	0.0720613	Foxq1	ENSMUST00000214470.2|Plcd1|ENSMUSG00000010660.4|phospholipase C, delta 1
mm39_v1_chr18_+_37610858_37610888	0.0702798	Foxq1	ENSMUST00000051442.7|Pcdhb16|ENSMUSG00000047910.7|protocadherin beta 16
mm39_v1_chr12_+_8027640_8027660	0.0697609	Foxq1	ENSMUST00000171271.8|Apob|ENSMUSG00000020609.15|apolipoprotein B	ENSMUST00000037811.13|Apob|ENSMUSG00000020609.15|apolipoprotein B
mm39_v1_chr2_+_89708781_89708781	0.069633	Foxq1	ENSMUST00000111519.3|Olfr1257|ENSMUSG00000049057.5|olfactory receptor 1257
mm39_v1_chrM_+_5319_5333	0.069078	Foxq1	ENSMUST00000082402.1|mt-Co1|ENSMUSG00000064351.1|mitochondrially encoded cytochrome c oxidase I
mm39_v1_chr18_-_89787603_89787682	0.0689871	Foxq1	ENSMUST00000097495.5|Dok6|ENSMUSG00000073514.5|docking protein 6
mm39_v1_chr3_+_79791798_79791904	0.0681448	Foxq1	ENSMUST00000118853.8|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B	ENSMUST00000145992.2|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr7_+_90075762_90075785	0.0677035	Foxq1	ENSMUST00000061391.9|Ccdc89|ENSMUSG00000044362.9|coiled-coil domain containing 89
mm39_v1_chr6_-_23655130_23655140	0.0672994	Foxq1	ENSMUST00000104979.2|Rnf148|ENSMUSG00000078179.2|ring finger protein 148
mm39_v1_chr5_-_124717146_124717194	0.0665043	Foxq1	ENSMUST00000031334.15|Eif2b1|ENSMUSG00000029388.15|eukaryotic translation initiation factor 2B, subunit 1 (alpha)
mm39_v1_chr5_-_73787646_73787691	0.0659095	Foxq1	ENSMUST00000152215.3|Lrrc66|ENSMUSG00000067206.4|leucine rich repeat containing 66
mm39_v1_chr10_+_59942274_59942290	0.0653837	Foxq1	ENSMUST00000165024.3|Spock2|ENSMUSG00000058297.17|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
mm39_v1_chr9_+_38259707_38259707	0.0643808	Foxq1	ENSMUST00000217063.2|Olfr898|ENSMUSG00000094588.3|olfactory receptor 898
mm39_v1_chr1_-_13442658_13442681	0.0638398	Foxq1	ENSMUST00000081713.11|Ncoa2|ENSMUSG00000005886.15|nuclear receptor coactivator 2
mm39_v1_chr7_-_133384449_133384492	0.0620521	Foxq1	ENSMUST00000063669.8|Dhx32|ENSMUSG00000030986.14|DEAH (Asp-Glu-Ala-His) box polypeptide 32
mm39_v1_chr9_-_56759229_56759296	0.0618317	Foxq1	ENSMUST00000055036.7|Odf3l1|ENSMUSG00000045620.8|outer dense fiber of sperm tails 3-like 1
mm39_v1_chr14_-_8146867_8146935	0.0597479	Foxq1	ENSMUST00000217035.2|Olfr31|ENSMUSG00000072707.4|olfactory receptor 31	ENSMUST00000206009.3|Olfr31|ENSMUSG00000072707.4|olfactory receptor 31
mm39_v1_chr16_-_26345493_26345524	0.0579005	Foxq1	ENSMUST00000165687.3|Tmem207|ENSMUSG00000091972.3|transmembrane protein 207
mm39_v1_chr3_-_141637245_141637284	0.0578896	Foxq1	ENSMUST00000106232.8|Bmpr1b|ENSMUSG00000052430.16|bone morphogenetic protein receptor, type 1B
mm39_v1_chrY_+_13042891_13042891	0.057094	Foxq1	ENSMUST00000194687.2|Gm20807|ENSMUSG00000104267.2|predicted gene, 20807
mm39_v1_chrY_-_10536042_10536042	0.0559399	Foxq1	ENSMUST00000187245.2|Gm20737|ENSMUSG00000095950.3|predicted gene, 20737
mm39_v1_chr2_-_104324035_104324098	0.0549449	Foxq1	ENSMUST00000111124.8|Hipk3|ENSMUSG00000027177.15|homeodomain interacting protein kinase 3
mm39_v1_chr1_+_6285082_6285232	0.0541547	Foxq1	ENSMUST00000160062.8|Rb1cc1|ENSMUSG00000025907.15|RB1-inducible coiled-coil 1
mm39_v1_chr1_+_156666485_156666548	0.0530982	Foxq1	ENSMUST00000111720.2|Angptl1|ENSMUSG00000033544.7|angiopoietin-like 1
mm39_v1_chr5_-_87847268_87847286	0.0515799	Foxq1	ENSMUST00000196869.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000199624.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000198057.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000082370.10|Csn2|ENSMUSG00000063157.10|casein beta
mm39_v1_chr18_-_3280999_3281088	0.0511866	Foxq1	ENSMUST00000049942.13|Crem|ENSMUSG00000063889.17|cAMP responsive element modulator
mm39_v1_chr6_-_130258891_130258891	0.0503322	Foxq1	ENSMUST00000112020.2|Klra10|ENSMUSG00000072718.7|killer cell lectin-like receptor subfamily A, member 10
mm39_v1_chr3_+_145693582_145693657	0.0502462	Foxq1	ENSMUST00000039517.11|Syde2|ENSMUSG00000036863.13|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
mm39_v1_chr11_+_77656414_77656468	0.0478488	Foxq1	ENSMUST00000164315.2|Myo18a|ENSMUSG00000000631.21|myosin XVIIIA
mm39_v1_chr1_+_13738967_13739019	0.0470407	Foxq1	ENSMUST00000088542.4|Xkr9|ENSMUSG00000067813.4|X-linked Kx blood group related 9
mm39_v1_chr10_-_85752932_85753002	0.0460012	Foxq1	ENSMUST00000218969.2|Prdm4|ENSMUSG00000035529.11|PR domain containing 4
mm39_v1_chr3_-_97329336_97329336	0.0436768	Foxq1	ENSMUST00000199297.4|Olfr1402|ENSMUSG00000051392.6|olfactory receptor 1402
mm39_v1_chrX_-_140979913_140979927	0.0428718	Foxq1	ENSMUST00000042530.4|Gucy2f|ENSMUSG00000042282.5|guanylate cyclase 2f
mm39_v1_chr9_+_45230370_45230398	0.0418031	Foxq1	ENSMUST00000034597.8|Tmprss13|ENSMUSG00000037129.8|transmembrane protease, serine 13
mm39_v1_chr6_-_28134544_28134544	0.0396741	Foxq1	ENSMUST00000115323.8|Grm8|ENSMUSG00000024211.16|glutamate receptor, metabotropic 8
mm39_v1_chr19_+_23881821_23882000	0.0383177	Foxq1	ENSMUST00000237688.2|Apba1|ENSMUSG00000024897.10|amyloid beta (A4) precursor protein binding, family  A, member 1
mm39_v1_chr17_-_37938000_37938090	0.0379894	Foxq1	ENSMUST00000223366.2|Olfr115|ENSMUSG00000092413.7|olfactory receptor 115	ENSMUST00000216128.2|Olfr116|ENSMUSG00000061336.4|olfactory receptor 116
mm39_v1_chr2_+_173579285_173579304	0.0356433	Foxq1	ENSMUST00000067530.6|Vapb|ENSMUSG00000054455.6|vesicle-associated membrane protein, associated protein B and C
mm39_v1_chr8_-_37420293_37420314	0.0348761	Foxq1	ENSMUST00000179501.2|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr13_-_67785843_67785892	0.0324929	Foxq1	ENSMUST00000225627.2|Gm49345|ENSMUSG00000114923.2|predicted gene, 49345	ENSMUST00000224814.2|Gm49345|ENSMUSG00000114923.2|predicted gene, 49345
mm39_v1_chr19_+_11872971_11872971	0.0315615	Foxq1	ENSMUST00000072784.4|Olfr1420|ENSMUSG00000060878.5|olfactory receptor 1420
mm39_v1_chr9_-_39188114_39188114	0.0303332	Foxq1	ENSMUST00000216698.2|Olfr945|ENSMUSG00000063380.4|olfactory receptor 945
mm39_v1_chr5_+_91175323_91175351	0.0303069	Foxq1	ENSMUST00000202724.4|Epgn|ENSMUSG00000035020.12|epithelial mitogen	ENSMUST00000041516.9|Epgn|ENSMUSG00000035020.12|epithelial mitogen
mm39_v1_chr2_-_88963396_88963398	0.0292818	Foxq1	ENSMUST00000214027.2|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222	ENSMUST00000215816.3|Olfr1222|ENSMUSG00000075101.5|olfactory receptor 1222
mm39_v1_chr2_+_24166920_24167026	0.0278719	Foxq1	ENSMUST00000168941.8|Il1f5|ENSMUSG00000026983.11|interleukin 1 family, member 5 (delta)	ENSMUST00000028360.8|Il1f5|ENSMUSG00000026983.11|interleukin 1 family, member 5 (delta)	ENSMUST00000123053.8|Il1f5|ENSMUSG00000026983.11|interleukin 1 family, member 5 (delta)
mm39_v1_chr14_+_53691753_53691784	0.0274427	Foxq1	ENSMUST00000180711.3|Trav6-4|ENSMUSG00000094468.6|T cell receptor alpha variable 6-4	ENSMUST00000184650.2|Trav6-4|ENSMUSG00000094468.6|T cell receptor alpha variable 6-4
mm39_v1_chr6_+_24733239_24733248	0.0273317	Foxq1	ENSMUST00000031690.6|Hyal6|ENSMUSG00000029679.8|hyaluronoglucosaminidase 6
mm39_v1_chrX_+_37689503_37689568	0.0270638	Foxq1	ENSMUST00000000365.3|Mcts1|ENSMUSG00000000355.14|malignant T cell amplified sequence 1
mm39_v1_chr13_+_22534534_22534534	0.0269243	Foxq1	ENSMUST00000226909.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198	ENSMUST00000227167.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198	ENSMUST00000226786.2|Vmn1r198|ENSMUSG00000095125.3|vomeronasal 1 receptor 198
mm39_v1_chr9_-_60048503_60048529	0.0261228	Foxq1	ENSMUST00000034829.6|Thsd4|ENSMUSG00000032289.16|thrombospondin, type I, domain containing 4
mm39_v1_chr6_+_123149847_123149855	0.0257121	Foxq1	ENSMUST00000088455.6|Clec4b2|ENSMUSG00000067767.6|C-type lectin domain family 4, member b2
mm39_v1_chr7_-_140597837_140597936	0.0257071	Foxq1	ENSMUST00000209328.2|Ifitm6|ENSMUSG00000059108.5|interferon induced transmembrane protein 6
mm39_v1_chr2_-_86061745_86061745	0.0254596	Foxq1	ENSMUST00000216056.2|Olfr1047|ENSMUSG00000075196.4|olfactory receptor 1047
mm39_v1_chr6_+_56933451_56933451	0.0247944	Foxq1	ENSMUST00000096612.4|Vmn1r4|ENSMUSG00000071893.8|vomeronasal 1 receptor 4
mm39_v1_chr7_+_101032021_101032047	0.0246847	Foxq1	ENSMUST00000141083.9|Arap1|ENSMUSG00000032812.19|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
mm39_v1_chr2_+_112114906_112114956	0.0245605	Foxq1	ENSMUST00000053666.8|Slc12a6|ENSMUSG00000027130.16|solute carrier family 12, member 6
mm39_v1_chr3_+_79792238_79792397	0.0242611	Foxq1	ENSMUST00000135021.2|Gask1b|ENSMUSG00000027955.17|golgi associated kinase 1B
mm39_v1_chr9_+_38259893_38259893	0.0239903	Foxq1	ENSMUST00000216304.2|Olfr898|ENSMUSG00000094588.3|olfactory receptor 898
mm39_v1_chrX_-_140508177_140508259	0.0237203	Foxq1	ENSMUST00000067841.8|Irs4|ENSMUSG00000054667.8|insulin receptor substrate 4
mm39_v1_chr13_+_98490742_98490758	0.0232263	Foxq1	ENSMUST00000105098.6|Foxd1|ENSMUSG00000078302.6|forkhead box D1
mm39_v1_chr2_+_23097482_23097509	0.0228069	Foxq1	ENSMUST00000028113.10|Potegl|ENSMUSG00000026774.12|POTE ankyrin domain family, member G like	ENSMUST00000114505.2|Potegl|ENSMUSG00000026774.12|POTE ankyrin domain family, member G like
mm39_v1_chr13_+_83723743_83723796	0.022788	Foxq1	ENSMUST00000198217.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000199210.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr8_+_47439916_47439946	0.022064	Foxq1	ENSMUST00000039840.15|Enpp6|ENSMUSG00000038173.16|ectonucleotide pyrophosphatase/phosphodiesterase 6
mm39_v1_chr5_+_122781941_122782072	0.0216719	Foxq1	ENSMUST00000100737.10|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000121489.8|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000031425.15|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7	ENSMUST00000086247.6|P2rx7|ENSMUSG00000029468.18|purinergic receptor P2X, ligand-gated ion channel, 7
mm39_v1_chrX_-_74423647_74423647	0.0216453	Foxq1	ENSMUST00000114085.9|F8|ENSMUSG00000031196.14|coagulation factor VIII
mm39_v1_chr10_+_102376109_102376142	0.0215384	Foxq1	ENSMUST00000055355.6|Rassf9|ENSMUSG00000044921.6|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
mm39_v1_chr16_+_43184191_43184251	0.0201362	Foxq1	ENSMUST00000156367.8|Zbtb20|ENSMUSG00000022708.17|zinc finger and BTB domain containing 20
mm39_v1_chrX_+_94942639_94942639	0.0194703	Foxq1	ENSMUST00000082183.8|Zc3h12b|ENSMUSG00000035045.18|zinc finger CCCH-type containing 12B
mm39_v1_chr11_-_100713348_100713405	0.0192317	Foxq1	ENSMUST00000107358.9|Stat5b|ENSMUSG00000020919.12|signal transducer and activator of transcription 5B
mm39_v1_chr7_+_102731092_102731092	0.0177126	Foxq1	ENSMUST00000214215.2|Olfr584|ENSMUSG00000073959.6|olfactory receptor 584
mm39_v1_chr13_+_92442488_92442488	0.0175491	Foxq1	ENSMUST00000188317.2|Gm20379|ENSMUSG00000100622.2|predicted gene, 20379
mm39_v1_chr7_-_84805206_84805206	0.0174947	Foxq1	ENSMUST00000168730.3|Vmn2r67|ENSMUSG00000095664.3|vomeronasal 2, receptor 67	ENSMUST00000233734.2|Vmn2r67|ENSMUSG00000095664.3|vomeronasal 2, receptor 67
mm39_v1_chr5_+_24679154_24679212	0.0165911	Foxq1	ENSMUST00000199856.2|Agap3|ENSMUSG00000023353.15|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
mm39_v1_chr5_+_4073343_4073415	0.0151846	Foxq1	ENSMUST00000238634.2|Akap9|ENSMUSG00000040407.19|A kinase (PRKA) anchor protein (yotiao) 9
mm39_v1_chr7_+_23833572_23833667	0.014294	Foxq1	ENSMUST00000205680.2|Zfp235|ENSMUSG00000047603.10|zinc finger protein 235	ENSMUST00000056549.9|Zfp235|ENSMUSG00000047603.10|zinc finger protein 235
mm39_v1_chrY_-_10752450_10752450	0.0142805	Foxq1	ENSMUST00000187434.2|Gm20777|ENSMUSG00000094813.3|predicted gene, 20777
mm39_v1_chr2_+_76236870_76236936	0.0142045	Foxq1	ENSMUST00000077972.11|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111929.8|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6	ENSMUST00000111930.9|Osbpl6|ENSMUSG00000042359.19|oxysterol binding protein-like 6
mm39_v1_chr4_-_119031375_119031418	0.0133048	Foxq1	ENSMUST00000106355.5|Zfp691|ENSMUSG00000045268.14|zinc finger protein 691
mm39_v1_chr17_-_37922942_37922942	0.0130469	Foxq1	ENSMUST00000221552.2|Olfr115|ENSMUSG00000092413.7|olfactory receptor 115
mm39_v1_chr5_+_104447037_104447162	0.0123221	Foxq1	ENSMUST00000031246.9|Ibsp|ENSMUSG00000029306.9|integrin binding sialoprotein
mm39_v1_chr7_+_18910340_18910365	0.0118731	Foxq1	ENSMUST00000117338.8|Eml2|ENSMUSG00000040811.16|echinoderm microtubule associated protein like 2
mm39_v1_chr6_-_130210285_130210285	0.0116904	Foxq1	ENSMUST00000032286.7|Klra7|ENSMUSG00000067599.14|killer cell lectin-like receptor, subfamily A, member 7
mm39_v1_chr8_-_33374282_33374329	0.0115521	Foxq1	ENSMUST00000209107.4|Nrg1|ENSMUSG00000062991.10|neuregulin 1	ENSMUST00000209022.3|Nrg1|ENSMUSG00000062991.10|neuregulin 1
mm39_v1_chr11_+_16207705_16207808	0.00997901	Foxq1	ENSMUST00000109645.9|Vstm2a|ENSMUSG00000048834.17|V-set and transmembrane domain containing 2A	ENSMUST00000109647.3|Vstm2a|ENSMUSG00000048834.17|V-set and transmembrane domain containing 2A
mm39_v1_chr6_+_38895902_38895964	0.00967086	Foxq1	ENSMUST00000003017.13|Tbxas1|ENSMUSG00000029925.14|thromboxane A synthase 1, platelet
mm39_v1_chr1_+_66426127_66426159	0.00887675	Foxq1	ENSMUST00000145419.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr18_+_37575553_37575553	0.00645142	Foxq1	ENSMUST00000056915.3|Pcdhb13|ENSMUSG00000047307.3|protocadherin beta 13
mm39_v1_chr9_-_56151334_56151382	0.00641717	Foxq1	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr11_-_59484115_59484115	0.00548865	Foxq1	ENSMUST00000215626.2|Olfr223|ENSMUSG00000048919.6|olfactory receptor 223
mm39_v1_chr2_-_86791037_86791037	0.00476925	Foxq1	ENSMUST00000213456.2|Olfr1099|ENSMUSG00000075168.5|olfactory receptor 1099
mm39_v1_chr3_+_99792699_99792735	0.00473576	Foxq1	ENSMUST00000164539.2|Spag17|ENSMUSG00000027867.11|sperm associated antigen 17
mm39_v1_chr11_+_96024612_96024612	0.00272864	Foxq1	ENSMUST00000167258.8|Ttll6|ENSMUSG00000038756.14|tubulin tyrosine ligase-like family, member 6
mm39_v1_chr2_+_177783713_177783731	0.00266657	Foxq1	ENSMUST00000103066.10|Phactr3|ENSMUSG00000027525.19|phosphatase and actin regulator 3
