mm39_v1_chr2_+_172864153_172864231	13.3285	Nkx2-9	ENSMUST00000173997.2|Rbm38|ENSMUSG00000027510.18|RNA binding motif protein 38
mm39_v1_chr4_-_119047202_119047213	12.2808	Nkx2-9	ENSMUST00000239029.2|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein	ENSMUST00000138395.9|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein	ENSMUST00000156746.3|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein
mm39_v1_chr4_-_119047167_119047178	10.554	Nkx2-9	ENSMUST00000030396.15|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein
mm39_v1_chr9_+_98372575_98372590	10.0593	Nkx2-9	ENSMUST00000035029.3|Rbp2|ENSMUSG00000032454.10|retinol binding protein 2, cellular
mm39_v1_chr4_-_119047180_119047200	8.61408	Nkx2-9	ENSMUST00000150864.3|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein	ENSMUST00000141227.9|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein
mm39_v1_chr2_+_103799873_103799876	8.55949	Nkx2-9	ENSMUST00000123437.8|Lmo2|ENSMUSG00000032698.16|LIM domain only 2
mm39_v1_chr4_-_119047146_119047161	8.51345	Nkx2-9	ENSMUST00000124626.9|Ermap|ENSMUSG00000028644.18|erythroblast membrane-associated protein
mm39_v1_chr11_+_117740111_117740196	7.56183	Nkx2-9	ENSMUST00000093906.5|Birc5|ENSMUSG00000017716.16|baculoviral IAP repeat-containing 5
mm39_v1_chr9_+_54606832_54606849	4.5718	Nkx2-9	ENSMUST00000070070.8|Dnaja4|ENSMUSG00000032285.16|DnaJ heat shock protein family (Hsp40) member A4
mm39_v1_chr10_-_62258195_62258270	4.19267	Nkx2-9	ENSMUST00000020277.9|Hkdc1|ENSMUSG00000020080.9|hexokinase domain containing 1
mm39_v1_chr9_+_72345801_72345880	4.12722	Nkx2-9	ENSMUST00000184604.8|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1	ENSMUST00000034746.10|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1
mm39_v1_chr12_+_24758724_24758769	4.03231	Nkx2-9	ENSMUST00000153058.8|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr11_+_117740077_117740108	3.95092	Nkx2-9	ENSMUST00000081387.11|Birc5|ENSMUSG00000017716.16|baculoviral IAP repeat-containing 5
mm39_v1_chr12_+_24758968_24759028	3.67261	Nkx2-9	ENSMUST00000154588.2|Rrm2|ENSMUSG00000020649.12|ribonucleotide reductase M2
mm39_v1_chr1_-_181669891_181669949	3.58097	Nkx2-9	ENSMUST00000193028.2|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000191878.6|Lbr|ENSMUSG00000004880.12|lamin B receptor	ENSMUST00000005003.12|Lbr|ENSMUSG00000004880.12|lamin B receptor
mm39_v1_chrX_-_101232978_101233000	3.31666	Nkx2-9	ENSMUST00000033683.8|Rps4x|ENSMUSG00000031320.10|ribosomal protein S4, X-linked
mm39_v1_chr16_-_58344548_58344561	3.15738	Nkx2-9	ENSMUST00000114357.10|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr19_-_40576782_40576815	3.07839	Nkx2-9	ENSMUST00000176939.8|Aldh18a1|ENSMUSG00000025007.14|aldehyde dehydrogenase 18 family, member A1
mm39_v1_chr11_-_68864666_68864690	3.00899	Nkx2-9	ENSMUST00000038644.5|Rangrf|ENSMUSG00000032892.15|RAN guanine nucleotide release factor
mm39_v1_chr16_-_58344602_58344611	2.90303	Nkx2-9	ENSMUST00000114358.9|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr4_-_61259997_61259999	2.83125	Nkx2-9	ENSMUST00000071005.9|Mup14|ENSMUSG00000073830.12|major urinary protein 14	ENSMUST00000075206.12|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chrX_+_134894573_134894573	2.7397	Nkx2-9	ENSMUST00000058119.9|Arxes2|ENSMUSG00000048040.9|adipocyte-related X-chromosome expressed sequence 2
mm39_v1_chr4_-_60777462_60777462	2.65472	Nkx2-9	ENSMUST00000211875.2|Mup22|ENSMUSG00000110439.2|major urinary protein 22
mm39_v1_chr4_-_60222580_60222599	2.63188	Nkx2-9	ENSMUST00000095058.5|Mup8|ENSMUSG00000078687.10|major urinary protein 8	ENSMUST00000163931.8|Mup8|ENSMUSG00000078687.10|major urinary protein 8
mm39_v1_chr15_+_79575046_79575109	2.60985	Nkx2-9	ENSMUST00000046463.10|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr4_-_61259801_61259801	2.56387	Nkx2-9	ENSMUST00000125461.8|Mup14|ENSMUSG00000073830.12|major urinary protein 14
mm39_v1_chr4_-_61700450_61700506	2.49655	Nkx2-9	ENSMUST00000107477.2|Mup19|ENSMUSG00000078673.11|major urinary protein 19	ENSMUST00000080606.9|Mup19|ENSMUSG00000078673.11|major urinary protein 19
mm39_v1_chr7_-_19411866_19411877	2.41025	Nkx2-9	ENSMUST00000142352.9|Apoc2|ENSMUSG00000002992.18|apolipoprotein C-II
mm39_v1_chr11_+_114559350_114559452	2.39149	Nkx2-9	ENSMUST00000106602.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000077915.10|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000106599.8|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38	ENSMUST00000082092.5|Rpl38|ENSMUSG00000057322.13|ribosomal protein L38
mm39_v1_chr1_+_63215976_63216078	2.2322	Nkx2-9	ENSMUST00000129339.8|Eef1b2|ENSMUSG00000025967.17|eukaryotic translation elongation factor 1 beta 2
mm39_v1_chr7_+_45084257_45084295	2.22616	Nkx2-9	ENSMUST00000003964.17|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr6_-_40976413_40976427	2.18656	Nkx2-9	ENSMUST00000166306.3|Gm2663|ENSMUSG00000096525.3|predicted gene 2663
mm39_v1_chr9_-_45923908_45923993	2.15035	Nkx2-9	ENSMUST00000217514.2|Pafah1b2|ENSMUSG00000003131.8|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm39_v1_chr13_+_93441447_93441786	2.10421	Nkx2-9	ENSMUST00000109497.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109498.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000060490.11|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109492.9|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109496.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1	ENSMUST00000109495.8|Homer1|ENSMUSG00000007617.19|homer scaffolding protein 1
mm39_v1_chr6_-_142453531_142453688	2.09433	Nkx2-9	ENSMUST00000134191.3|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239397.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000239395.2|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B	ENSMUST00000032373.12|Ldhb|ENSMUSG00000030246.13|lactate dehydrogenase B
mm39_v1_chr1_+_74193138_74193162	2.05312	Nkx2-9	ENSMUST00000027372.8|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2	ENSMUST00000106899.4|Cxcr2|ENSMUSG00000026180.9|chemokine (C-X-C motif) receptor 2
mm39_v1_chr1_+_128031055_128031097	1.92131	Nkx2-9	ENSMUST00000188381.7|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1	ENSMUST00000187900.7|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1	ENSMUST00000036288.11|R3hdm1|ENSMUSG00000056211.14|R3H domain containing 1
mm39_v1_chr1_-_156301821_156301901	1.91013	Nkx2-9	ENSMUST00000188027.2|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1	ENSMUST00000187507.7|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1	ENSMUST00000189661.7|Soat1|ENSMUSG00000026600.13|sterol O-acyltransferase 1
mm39_v1_chr7_+_45084300_45084314	1.89566	Nkx2-9	ENSMUST00000211150.2|Gys1|ENSMUSG00000003865.17|glycogen synthase 1, muscle
mm39_v1_chr9_-_99592116_99592138	1.83855	Nkx2-9	ENSMUST00000035048.12|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr16_-_58344497_58344542	1.82483	Nkx2-9	ENSMUST00000151510.2|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000126978.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	ENSMUST00000123918.8|St3gal6|ENSMUSG00000022747.18|ST3 beta-galactoside alpha-2,3-sialyltransferase 6
mm39_v1_chr2_+_121337226_121337273	1.74609	Nkx2-9	ENSMUST00000099473.10|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76	ENSMUST00000110602.9|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr17_+_24939225_24939236	1.72294	Nkx2-9	ENSMUST00000146867.2|Rps2|ENSMUSG00000044533.16|ribosomal protein S2
mm39_v1_chr7_-_110462446_110462465	1.67418	Nkx2-9	ENSMUST00000033050.5|Lyve1|ENSMUSG00000030787.5|lymphatic vessel endothelial hyaluronan receptor 1
mm39_v1_chr19_-_5779648_5779717	1.61139	Nkx2-9	ENSMUST00000116558.3|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000099955.4|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B	ENSMUST00000161368.2|Fam89b|ENSMUSG00000024939.7|family with sequence similarity 89, member B
mm39_v1_chr4_-_43010225_43010355	1.56868	Nkx2-9	ENSMUST00000030165.5|Fancg|ENSMUSG00000028453.11|Fanconi anemia, complementation group G
mm39_v1_chr3_+_113824181_113824220	1.51482	Nkx2-9	ENSMUST00000123619.8|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1	ENSMUST00000092155.12|Col11a1|ENSMUSG00000027966.21|collagen, type XI, alpha 1
mm39_v1_chr7_-_33929667_33929704	1.50746	Nkx2-9	ENSMUST00000206415.2|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr11_-_80670815_80670871	1.45504	Nkx2-9	ENSMUST00000041065.14|Myo1d|ENSMUSG00000035441.15|myosin ID	ENSMUST00000070997.6|Myo1d|ENSMUSG00000035441.15|myosin ID
mm39_v1_chr7_-_33929708_33929761	1.39899	Nkx2-9	ENSMUST00000038027.6|Gpi1|ENSMUSG00000036427.6|glucose-6-phosphate isomerase 1
mm39_v1_chr9_-_99592058_99592075	1.32	Nkx2-9	ENSMUST00000136429.8|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr1_-_136273811_136273884	1.19531	Nkx2-9	ENSMUST00000048309.12|Camsap2|ENSMUSG00000041570.15|calmodulin regulated spectrin-associated protein family, member 2
mm39_v1_chr6_-_113411489_113411574	1.17628	Nkx2-9	ENSMUST00000133348.2|Cidec|ENSMUSG00000030278.12|cell death-inducing DFFA-like effector c
mm39_v1_chr11_+_30904390_30904445	1.17519	Nkx2-9	ENSMUST00000020551.13|Asb3|ENSMUSG00000020305.14|ankyrin repeat and SOCS box-containing 3	ENSMUST00000117883.2|Asb3|ENSMUSG00000020305.14|ankyrin repeat and SOCS box-containing 3
mm39_v1_chr3_+_37474422_37474484	1.15699	Nkx2-9	ENSMUST00000029277.13|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5	ENSMUST00000198968.2|Spata5|ENSMUSG00000027722.15|spermatogenesis associated 5
mm39_v1_chr2_+_121337195_121337215	1.15323	Nkx2-9	ENSMUST00000028676.12|Wdr76|ENSMUSG00000027242.15|WD repeat domain 76
mm39_v1_chr10_+_79518138_79518308	1.14026	Nkx2-9	ENSMUST00000166603.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000219791.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000219930.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34	ENSMUST00000218964.2|Cdc34|ENSMUSG00000020307.16|cell division cycle 34
mm39_v1_chr10_+_87926932_87926939	1.10837	Nkx2-9	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chr12_-_113561594_113561603	1.06004	Nkx2-9	ENSMUST00000103444.3|Ighv5-4|ENSMUSG00000095612.3|immunoglobulin heavy variable 5-4
mm39_v1_chr7_+_88079465_88079495	1.05691	Nkx2-9	ENSMUST00000107256.4|Rab38|ENSMUSG00000030559.9|RAB38, member RAS oncogene family
mm39_v1_chr12_-_113666198_113666282	1.01448	Nkx2-9	ENSMUST00000103450.4|Ighv5-12|ENSMUSG00000095429.2|immunoglobulin heavy variable 5-12
mm39_v1_chr10_+_68559553_68559587	1.00505	Nkx2-9	ENSMUST00000080995.8|Tmem26|ENSMUSG00000060044.9|transmembrane protein 26
mm39_v1_chr8_+_96360081_96360215	1.00103	Nkx2-9	ENSMUST00000034094.11|Gins3|ENSMUSG00000031669.11|GINS complex subunit 3 (Psf3 homolog)	ENSMUST00000212434.2|Gins3|ENSMUSG00000031669.11|GINS complex subunit 3 (Psf3 homolog)
mm39_v1_chr18_-_43610829_43610868	0.955248	Nkx2-9	ENSMUST00000057110.11|Eif3j2|ENSMUSG00000043424.11|eukaryotic translation initiation factor 3, subunit J2
mm39_v1_chr6_-_38331482_38331538	0.929569	Nkx2-9	ENSMUST00000031850.10|Zc3hav1|ENSMUSG00000029826.15|zinc finger CCCH type, antiviral 1	ENSMUST00000114898.3|Zc3hav1|ENSMUSG00000029826.15|zinc finger CCCH type, antiviral 1
mm39_v1_chr13_-_59890564_59890564	0.899761	Nkx2-9	ENSMUST00000055343.3|1700014D04Rik|ENSMUSG00000051054.5|RIKEN cDNA 1700014D04 gene
mm39_v1_chr6_+_135339929_135339959	0.893411	Nkx2-9	ENSMUST00000032330.16|Emp1|ENSMUSG00000030208.16|epithelial membrane protein 1
mm39_v1_chrX_+_41238193_41238289	0.893166	Nkx2-9	ENSMUST00000115073.9|Stag2|ENSMUSG00000025862.15|stromal antigen 2	ENSMUST00000115072.8|Stag2|ENSMUSG00000025862.15|stromal antigen 2
mm39_v1_chr6_-_78445846_78445861	0.887843	Nkx2-9	ENSMUST00000032089.3|Reg3g|ENSMUSG00000030017.3|regenerating islet-derived 3 gamma
mm39_v1_chr5_-_138185438_138185499	0.877113	Nkx2-9	ENSMUST00000110937.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000139276.2|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000048698.14|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6	ENSMUST00000123415.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr9_-_56068282_56068360	0.8766	Nkx2-9	ENSMUST00000034876.10|Tspan3|ENSMUSG00000032324.12|tetraspanin 3
mm39_v1_chr6_+_33226020_33226087	0.855473	Nkx2-9	ENSMUST00000052266.15|Exoc4|ENSMUSG00000029763.18|exocyst complex component 4	ENSMUST00000090381.11|Exoc4|ENSMUSG00000029763.18|exocyst complex component 4	ENSMUST00000115080.2|Exoc4|ENSMUSG00000029763.18|exocyst complex component 4
mm39_v1_chr12_-_113589576_113589657	0.841942	Nkx2-9	ENSMUST00000103446.2|Ighv5-6|ENSMUSG00000094951.2|immunoglobulin heavy variable 5-6
mm39_v1_chr9_+_57411279_57411353	0.805281	Nkx2-9	ENSMUST00000080514.9|Rpp25|ENSMUSG00000062309.9|ribonuclease P/MRP 25 subunit
mm39_v1_chr12_-_114443071_114443116	0.787343	Nkx2-9	ENSMUST00000103492.2|Ighv10-1|ENSMUSG00000095981.2|immunoglobulin heavy variable 10-1
mm39_v1_chr12_-_113802603_113802664	0.775429	Nkx2-9	ENSMUST00000103458.3|Ighv5-16|ENSMUSG00000094194.3|immunoglobulin heavy variable 5-16	ENSMUST00000193652.2|Ighv5-16|ENSMUSG00000094194.3|immunoglobulin heavy variable 5-16
mm39_v1_chr8_-_81607140_81607163	0.763177	Nkx2-9	ENSMUST00000210676.2|Gab1|ENSMUSG00000031714.10|growth factor receptor bound protein 2-associated protein 1
mm39_v1_chr11_-_103844870_103844882	0.746483	Nkx2-9	ENSMUST00000103075.11|Nsf|ENSMUSG00000034187.19|N-ethylmaleimide sensitive fusion protein
mm39_v1_chr18_-_60981981_60982050	0.745625	Nkx2-9	ENSMUST00000177172.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1	ENSMUST00000175934.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1	ENSMUST00000176630.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1
mm39_v1_chr2_-_121337120_121337151	0.739961	Nkx2-9	ENSMUST00000089926.6|Mfap1a|ENSMUSG00000068479.6|microfibrillar-associated protein 1A
mm39_v1_chr8_-_81607109_81607129	0.711943	Nkx2-9	ENSMUST00000034150.10|Gab1|ENSMUSG00000031714.10|growth factor receptor bound protein 2-associated protein 1
mm39_v1_chr11_-_32217547_32217707	0.676974	Nkx2-9	ENSMUST00000109389.9|Nprl3|ENSMUSG00000020289.16|nitrogen permease regulator-like 3	ENSMUST00000129010.2|Nprl3|ENSMUSG00000020289.16|nitrogen permease regulator-like 3	ENSMUST00000020530.12|Nprl3|ENSMUSG00000020289.16|nitrogen permease regulator-like 3
mm39_v1_chr12_-_113700190_113700279	0.669951	Nkx2-9	ENSMUST00000103452.3|Ighv5-9-1|ENSMUSG00000095210.3|immunoglobulin heavy variable 5-9-1	ENSMUST00000192264.2|Ighv5-9-1|ENSMUSG00000095210.3|immunoglobulin heavy variable 5-9-1
mm39_v1_chr12_-_115825934_115825975	0.660956	Nkx2-9	ENSMUST00000198777.2|Ighv1-77|ENSMUSG00000096452.3|immunoglobulin heavy variable 1-77
mm39_v1_chr8_+_70945806_70945817	0.631091	Nkx2-9	ENSMUST00000008032.14|Crlf1|ENSMUSG00000007888.16|cytokine receptor-like factor 1
mm39_v1_chr10_+_94034817_94034905	0.591621	Nkx2-9	ENSMUST00000020209.16|Ndufa12|ENSMUSG00000020022.18|NADH:ubiquinone oxidoreductase subunit A12	ENSMUST00000179990.8|Ndufa12|ENSMUSG00000020022.18|NADH:ubiquinone oxidoreductase subunit A12
mm39_v1_chr12_-_113823290_113823320	0.585142	Nkx2-9	ENSMUST00000103459.5|Ighv5-17|ENSMUSG00000095571.3|immunoglobulin heavy variable 5-17
mm39_v1_chr19_+_12257218_12257303	0.55301	Nkx2-9	ENSMUST00000207186.4|Olfr1434|ENSMUSG00000095640.5|olfactory receptor 1434	ENSMUST00000207915.2|Olfr1434|ENSMUSG00000095640.5|olfactory receptor 1434
mm39_v1_chr11_+_106680062_106680141	0.545867	Nkx2-9	ENSMUST00000103068.10|Cep95|ENSMUSG00000018372.14|centrosomal protein 95	ENSMUST00000018516.11|Cep95|ENSMUSG00000018372.14|centrosomal protein 95
mm39_v1_chr18_+_37102969_37102969	0.542753	Nkx2-9	ENSMUST00000194544.2|Gm37013|ENSMUSG00000102836.2|predicted gene, 37013
mm39_v1_chr3_-_154760978_154761044	0.536207	Nkx2-9	ENSMUST00000064076.6|Tnni3k|ENSMUSG00000040086.14|TNNI3 interacting kinase
mm39_v1_chr2_-_105832353_105832353	0.524416	Nkx2-9	ENSMUST00000155811.2|Dnajc24|ENSMUSG00000027166.15|DnaJ heat shock protein family (Hsp40) member C24
mm39_v1_chr5_-_138185686_138185724	0.515542	Nkx2-9	ENSMUST00000110936.8|Taf6|ENSMUSG00000036980.14|TATA-box binding protein associated factor 6
mm39_v1_chr6_+_136530970_136531002	0.503971	Nkx2-9	ENSMUST00000189535.2|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr7_+_75259778_75259829	0.503208	Nkx2-9	ENSMUST00000207923.2|Akap13|ENSMUSG00000066406.17|A kinase (PRKA) anchor protein 13
mm39_v1_chrX_-_94701983_94702115	0.494668	Nkx2-9	ENSMUST00000119640.8|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing	ENSMUST00000120620.8|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing	ENSMUST00000044382.7|Zc4h2|ENSMUSG00000035062.14|zinc finger, C4H2 domain containing
mm39_v1_chr4_-_61753422_61753470	0.491539	Nkx2-9	ENSMUST00000082287.3|Mup5|ENSMUSG00000058523.3|major urinary protein 5
mm39_v1_chr11_-_106679983_106680018	0.489365	Nkx2-9	ENSMUST00000129585.8|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chr14_+_53007210_53007210	0.488907	Nkx2-9	ENSMUST00000178768.4|Trav7d-4|ENSMUSG00000094023.4|T cell receptor alpha variable 7D-4
mm39_v1_chr16_+_17716480_17716523	0.482288	Nkx2-9	ENSMUST00000055374.8|Tssk2|ENSMUSG00000045521.8|testis-specific serine kinase 2
mm39_v1_chrX_+_7744535_7744553	0.471038	Nkx2-9	ENSMUST00000033495.15|Pim2|ENSMUSG00000031155.18|proviral integration site 2
mm39_v1_chr12_-_113860566_113860630	0.444791	Nkx2-9	ENSMUST00000103474.5|Ighv7-1|ENSMUSG00000076665.5|immunoglobulin heavy variable 7-1
mm39_v1_chr11_+_69920849_69920924	0.431293	Nkx2-9	ENSMUST00000143920.4|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr13_+_109397184_109397214	0.419934	Nkx2-9	ENSMUST00000153234.8|Pde4d|ENSMUSG00000021699.18|phosphodiesterase 4D, cAMP specific
mm39_v1_chr4_+_88760098_88760098	0.418351	Nkx2-9	ENSMUST00000094973.5|Ifna4|ENSMUSG00000070904.5|interferon alpha 4
mm39_v1_chr4_+_129714494_129714503	0.410792	Nkx2-9	ENSMUST00000165853.2|Ptp4a2|ENSMUSG00000028788.15|protein tyrosine phosphatase 4a2
mm39_v1_chr3_+_159545309_159545390	0.390233	Nkx2-9	ENSMUST00000068952.10|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator	ENSMUST00000198878.2|Wls|ENSMUSG00000028173.11|wntless WNT ligand secretion mediator
mm39_v1_chrX_-_101950075_101950164	0.38922	Nkx2-9	ENSMUST00000120808.8|Dmrtc1a|ENSMUSG00000031323.9|DMRT-like family C1a	ENSMUST00000121197.8|Dmrtc1a|ENSMUSG00000031323.9|DMRT-like family C1a
mm39_v1_chr17_-_26080429_26080484	0.378511	Nkx2-9	ENSMUST00000079461.15|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90	ENSMUST00000176923.9|Wdr90|ENSMUSG00000073434.13|WD repeat domain 90
mm39_v1_chr19_-_12147438_12147476	0.374404	Nkx2-9	ENSMUST00000207679.3|Olfr1555-ps1|ENSMUSG00000108889.3|olfactory receptor 1555, pseudogene 1	ENSMUST00000219261.2|Olfr1555-ps1|ENSMUSG00000108889.3|olfactory receptor 1555, pseudogene 1
mm39_v1_chr11_+_69920956_69920981	0.370944	Nkx2-9	ENSMUST00000232115.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr12_-_114502585_114502602	0.370381	Nkx2-9	ENSMUST00000103496.4|Ighv1-7|ENSMUSG00000095200.3|immunoglobulin heavy variable V1-7
mm39_v1_chr11_+_69920542_69920663	0.367514	Nkx2-9	ENSMUST00000232266.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000132597.5|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr7_+_30121147_30121167	0.36741	Nkx2-9	ENSMUST00000108176.9|Nfkbid|ENSMUSG00000036931.16|nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta
mm39_v1_chr14_+_54440591_54440591	0.348502	Nkx2-9	ENSMUST00000103725.2|Traj16|ENSMUSG00000076913.2|T cell receptor alpha joining 16
mm39_v1_chr3_-_75389047_75389048	0.336064	Nkx2-9	ENSMUST00000193989.4|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49	ENSMUST00000203169.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chr9_+_44238089_44238168	0.33196	Nkx2-9	ENSMUST00000054708.5|Dpagt1|ENSMUSG00000032123.6|dolichyl-phosphate (UDP-N-acetylglucosamine) acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
mm39_v1_chr1_-_74639723_74639781	0.328799	Nkx2-9	ENSMUST00000127938.8|Rnf25|ENSMUSG00000026171.13|ring finger protein 25	ENSMUST00000154874.8|Rnf25|ENSMUSG00000026171.13|ring finger protein 25
mm39_v1_chr18_-_65527078_65527137	0.323914	Nkx2-9	ENSMUST00000035548.16|Alpk2|ENSMUSG00000032845.17|alpha-kinase 2
mm39_v1_chr5_-_24650164_24650285	0.314117	Nkx2-9	ENSMUST00000115043.8|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000115041.2|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase	ENSMUST00000030800.13|Fastk|ENSMUSG00000028959.15|Fas-activated serine/threonine kinase
mm39_v1_chr12_-_115410489_115410525	0.299742	Nkx2-9	ENSMUST00000194581.2|Ighv1-62-2|ENSMUSG00000096078.3|immunoglobulin heavy variable 1-62-2
mm39_v1_chr1_+_59296065_59296066	0.298736	Nkx2-9	ENSMUST00000160662.8|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15	ENSMUST00000114248.3|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15
mm39_v1_chr9_-_48822399_48822441	0.293813	Nkx2-9	ENSMUST00000003826.8|Htr3a|ENSMUSG00000032269.9|5-hydroxytryptamine (serotonin) receptor 3A
mm39_v1_chr12_-_114487525_114487579	0.292617	Nkx2-9	ENSMUST00000103495.3|Ighv10-3|ENSMUSG00000095700.3|immunoglobulin heavy variable V10-3
mm39_v1_chr13_-_64645606_64645606	0.279258	Nkx2-9	ENSMUST00000180282.2|Fam240b|ENSMUSG00000096537.7|family with sequence similarity 240 member B
mm39_v1_chr10_-_129951252_129951252	0.260514	Nkx2-9	ENSMUST00000213145.2|Olfr823|ENSMUSG00000096747.3|olfactory receptor 823
mm39_v1_chr11_+_69917640_69917825	0.254435	Nkx2-9	ENSMUST00000135916.9|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4	ENSMUST00000232659.2|Dlg4|ENSMUSG00000020886.18|discs large MAGUK scaffold protein 4
mm39_v1_chr5_+_91222470_91222487	0.252812	Nkx2-9	ENSMUST00000031324.6|Ereg|ENSMUSG00000029377.6|epiregulin
mm39_v1_chr7_-_101667346_101667414	0.252477	Nkx2-9	ENSMUST00000209844.2|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein	ENSMUST00000211502.2|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein	ENSMUST00000094134.5|Il18bp|ENSMUSG00000070427.5|interleukin 18 binding protein
mm39_v1_chr9_+_108368032_108368072	0.249301	Nkx2-9	ENSMUST00000166103.9|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000085044.14|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000193678.6|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19	ENSMUST00000178075.8|Usp19|ENSMUSG00000006676.17|ubiquitin specific peptidase 19
mm39_v1_chr12_-_75463555_75463555	0.240253	Nkx2-9	ENSMUST00000051079.4|Gphb5|ENSMUSG00000048982.4|glycoprotein hormone beta 5
mm39_v1_chr3_-_59009231_59009249	0.228517	Nkx2-9	ENSMUST00000085040.5|Gpr171|ENSMUSG00000050075.9|G protein-coupled receptor 171
mm39_v1_chr11_+_76792977_76792993	0.223153	Nkx2-9	ENSMUST00000102495.8|Tmigd1|ENSMUSG00000020839.17|transmembrane and immunoglobulin domain containing 1
mm39_v1_chrX_+_13499008_13499040	0.210056	Nkx2-9	ENSMUST00000096492.4|Gpr34|ENSMUSG00000040229.12|G protein-coupled receptor 34
mm39_v1_chr1_+_61017057_61017096	0.204016	Nkx2-9	ENSMUST00000027162.12|Icos|ENSMUSG00000026009.15|inducible T cell co-stimulator	ENSMUST00000102827.4|Icos|ENSMUSG00000026009.15|inducible T cell co-stimulator
mm39_v1_chr2_+_67004178_67004218	0.202175	Nkx2-9	ENSMUST00000239009.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2	ENSMUST00000238912.2|Xirp2|ENSMUSG00000027022.15|xin actin-binding repeat containing 2
mm39_v1_chr17_+_35878332_35878347	0.200198	Nkx2-9	ENSMUST00000044326.5|2300002M23Rik|ENSMUSG00000039269.6|RIKEN cDNA 2300002M23 gene
mm39_v1_chr17_-_26204621_26204770	0.195812	Nkx2-9	ENSMUST00000041641.9|Capn15|ENSMUSG00000037326.11|calpain 15	ENSMUST00000212520.2|Capn15|ENSMUSG00000037326.11|calpain 15
mm39_v1_chr11_-_22932090_22932382	0.189968	Nkx2-9	ENSMUST00000160826.2|Commd1b|ENSMUSG00000098650.2|COMM domain containing 1B	ENSMUST00000093270.6|Commd1|ENSMUSG00000051355.19|COMM domain containing 1	ENSMUST00000071068.9|Commd1|ENSMUSG00000051355.19|COMM domain containing 1	ENSMUST00000159081.8|Commd1|ENSMUSG00000051355.19|COMM domain containing 1
mm39_v1_chr13_-_32960379_32960415	0.185613	Nkx2-9	ENSMUST00000230119.2|Mylk4|ENSMUSG00000044951.18|myosin light chain kinase family, member 4
mm39_v1_chr15_-_98816012_98816112	0.179995	Nkx2-9	ENSMUST00000023736.10|Lmbr1l|ENSMUSG00000022999.16|limb region 1 like
mm39_v1_chr11_-_106679312_106679358	0.178481	Nkx2-9	ENSMUST00000021062.12|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chr3_-_37180093_37180110	0.165362	Nkx2-9	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr6_-_141954471_141954471	0.165171	Nkx2-9	ENSMUST00000111832.3|Gm6614|ENSMUSG00000079263.9|predicted gene 6614
mm39_v1_chr5_-_35259847_35259864	0.161854	Nkx2-9	ENSMUST00000153664.2|Lrpap1|ENSMUSG00000029103.17|low density lipoprotein receptor-related protein associated protein 1
mm39_v1_chr16_-_48232770_48232785	0.157094	Nkx2-9	ENSMUST00000212197.2|Gm5485|ENSMUSG00000110573.2|predicted gene 5485
mm39_v1_chr12_-_114793177_114793369	0.148052	Nkx2-9	ENSMUST00000103511.2|Ighv1-31|ENSMUSG00000096649.3|immunoglobulin heavy variable 1-31	ENSMUST00000195735.2|Ighv1-31|ENSMUSG00000096649.3|immunoglobulin heavy variable 1-31
mm39_v1_chr7_-_133966588_133966613	0.104083	Nkx2-9	ENSMUST00000172947.8|D7Ertd443e|ENSMUSG00000030994.17|DNA segment, Chr 7, ERATO Doi 443, expressed
mm39_v1_chr17_-_37548054_37548221	0.0694426	Nkx2-9	ENSMUST00000213328.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000214848.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000214622.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000073667.6|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97	ENSMUST00000216225.2|Olfr97|ENSMUSG00000058802.6|olfactory receptor 97
mm39_v1_chr6_-_42453259_42453269	0.0668481	Nkx2-9	ENSMUST00000204324.3|Olfr457|ENSMUSG00000091983.4|olfactory receptor 457	ENSMUST00000203396.3|Olfr457|ENSMUSG00000091983.4|olfactory receptor 457
mm39_v1_chr7_+_34885782_34885833	0.0656211	Nkx2-9	ENSMUST00000135452.8|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10	ENSMUST00000001854.12|Slc7a10|ENSMUSG00000030495.13|solute carrier family 7 (cationic amino acid transporter, y+ system), member 10
mm39_v1_chr16_+_24266829_24266903	0.0634107	Nkx2-9	ENSMUST00000078988.10|Lpp|ENSMUSG00000033306.16|LIM domain containing preferred translocation partner in lipoma
mm39_v1_chr12_-_114579763_114579763	0.0590975	Nkx2-9	ENSMUST00000103500.2|Ighv1-12|ENSMUSG00000095416.7|immunoglobulin heavy variable V1-12
mm39_v1_chr4_-_88602149_88602149	0.0525066	Nkx2-9	ENSMUST00000105147.2|Ifna2|ENSMUSG00000078354.2|interferon alpha 2
mm39_v1_chr12_+_103281188_103281224	0.0486776	Nkx2-9	ENSMUST00000189885.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A	ENSMUST00000179363.2|Fam181a|ENSMUSG00000096753.8|family with sequence similarity 181, member A
mm39_v1_chr17_+_34062059_34062104	0.0481815	Nkx2-9	ENSMUST00000002379.15|Cd320|ENSMUSG00000002308.17|CD320 antigen
mm39_v1_chr11_-_102837514_102837551	0.0453618	Nkx2-9	ENSMUST00000057849.6|C1ql1|ENSMUSG00000045532.6|complement component 1, q subcomponent-like 1
mm39_v1_chr17_-_32491339_32491407	0.0446395	Nkx2-9	ENSMUST00000237008.2|Brd4|ENSMUSG00000024002.19|bromodomain containing 4
mm39_v1_chr1_+_24216691_24216737	0.0324319	Nkx2-9	ENSMUST00000054588.15|Col9a1|ENSMUSG00000026147.17|collagen, type IX, alpha 1
mm39_v1_chr12_-_115567853_115568053	0.0263344	Nkx2-9	ENSMUST00000103538.3|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67	ENSMUST00000198646.2|Ighv1-67|ENSMUSG00000095863.3|immunoglobulin heavy variable V1-67
mm39_v1_chr6_+_42263644_42263790	0.0229275	Nkx2-9	ENSMUST00000163936.8|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1
mm39_v1_chr7_-_103814019_103814039	0.0203708	Nkx2-9	ENSMUST00000154555.2|Olfm5|ENSMUSG00000044265.17|olfactomedin 5	ENSMUST00000051137.15|Olfm5|ENSMUSG00000044265.17|olfactomedin 5
mm39_v1_chr6_+_42263609_42263627	0.0202363	Nkx2-9	ENSMUST00000238845.2|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1	ENSMUST00000031894.13|Clcn1|ENSMUSG00000029862.17|chloride channel, voltage-sensitive 1
mm39_v1_chr5_+_117552042_117552076	0.0145578	Nkx2-9	ENSMUST00000180430.2|Ksr2|ENSMUSG00000061578.9|kinase suppressor of ras 2
mm39_v1_chr8_+_67150055_67150080	0.0103824	Nkx2-9	ENSMUST00000039303.7|Npy1r|ENSMUSG00000036437.7|neuropeptide Y receptor Y1
mm39_v1_chr14_+_53210216_53210216	0.00663813	Nkx2-9	ENSMUST00000103599.3|Trav3d-3|ENSMUSG00000093953.3|T cell receptor alpha variable 3D-3
mm39_v1_chr6_-_71609881_71609974	0.000190813	Nkx2-9	ENSMUST00000065509.11|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A	ENSMUST00000207023.2|Kdm3a|ENSMUSG00000053470.14|lysine (K)-specific demethylase 3A
