mm39_v1_chr6_-_41681273_41681285	4.08425	Nkx2-2	ENSMUST00000031899.14|Kel|ENSMUSG00000029866.14|Kell blood group
mm39_v1_chr2_+_174292471_174292502	3.94321	Nkx2-2	ENSMUST00000016399.6|Tubb1|ENSMUSG00000016255.6|tubulin, beta 1 class VI
mm39_v1_chr9_+_72345801_72345880	3.18771	Nkx2-2	ENSMUST00000184604.8|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1	ENSMUST00000034746.10|Mns1|ENSMUSG00000032221.15|meiosis-specific nuclear structural protein 1
mm39_v1_chr11_+_78192355_78192432	2.37756	Nkx2-2	ENSMUST00000045026.4|Spag5|ENSMUSG00000002055.10|sperm associated antigen 5
mm39_v1_chr6_+_86055018_86055046	2.32651	Nkx2-2	ENSMUST00000205034.3|Add2|ENSMUSG00000030000.11|adducin 2 (beta)	ENSMUST00000203724.3|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chr4_+_46039202_46039213	2.27622	Nkx2-2	ENSMUST00000156200.8|Tmod1|ENSMUSG00000028328.14|tropomodulin 1
mm39_v1_chr6_-_70769135_70769216	2.04114	Nkx2-2	ENSMUST00000066134.6|Rpia|ENSMUSG00000053604.6|ribose 5-phosphate isomerase A
mm39_v1_chr11_-_79971750_79971828	1.99136	Nkx2-2	ENSMUST00000103233.10|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3	ENSMUST00000061283.15|Crlf3|ENSMUSG00000017561.17|cytokine receptor-like factor 3
mm39_v1_chr6_-_136834725_136834747	1.92492	Nkx2-2	ENSMUST00000032341.3|Art4|ENSMUSG00000030217.3|ADP-ribosyltransferase 4
mm39_v1_chr1_+_40478787_40478815	1.91923	Nkx2-2	ENSMUST00000097772.10|Il1rl1|ENSMUSG00000026069.16|interleukin 1 receptor-like 1
mm39_v1_chr6_+_86055048_86055071	1.88773	Nkx2-2	ENSMUST00000032069.8|Add2|ENSMUSG00000030000.11|adducin 2 (beta)
mm39_v1_chr7_+_110371811_110371962	1.88087	Nkx2-2	ENSMUST00000005829.13|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr17_+_18108102_18108150	1.80525	Nkx2-2	ENSMUST00000054871.12|Fpr3|ENSMUSG00000079700.8|formyl peptide receptor 3	ENSMUST00000064068.5|Fpr2|ENSMUSG00000052270.8|formyl peptide receptor 2
mm39_v1_chr17_+_43879496_43879565	1.67858	Nkx2-2	ENSMUST00000169694.2|Pla2g7|ENSMUSG00000023913.18|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm39_v1_chr12_+_105996961_105996984	1.6393	Nkx2-2	ENSMUST00000220629.2|Vrk1|ENSMUSG00000021115.16|vaccinia related kinase 1
mm39_v1_chr5_-_34326847_34326878	1.63673	Nkx2-2	ENSMUST00000202042.2|Haus3|ENSMUSG00000079555.3|HAUS augmin-like complex, subunit 3	ENSMUST00000060049.8|Haus3|ENSMUSG00000079555.3|HAUS augmin-like complex, subunit 3
mm39_v1_chr17_+_18108086_18108099	1.61147	Nkx2-2	ENSMUST00000149944.2|Fpr2|ENSMUSG00000052270.8|formyl peptide receptor 2
mm39_v1_chr10_-_93727003_93727064	1.59917	Nkx2-2	ENSMUST00000180840.8|Metap2|ENSMUSG00000036112.16|methionine aminopeptidase 2
mm39_v1_chr2_+_83474779_83474837	1.5883	Nkx2-2	ENSMUST00000081591.7|Zc3h15|ENSMUSG00000027091.15|zinc finger CCCH-type containing 15
mm39_v1_chr11_+_23234644_23234669	1.58003	Nkx2-2	ENSMUST00000150750.3|Xpo1|ENSMUSG00000020290.15|exportin 1
mm39_v1_chr19_-_60770628_60770681	1.57638	Nkx2-2	ENSMUST00000238125.2|Eif3a|ENSMUSG00000024991.9|eukaryotic translation initiation factor 3, subunit A
mm39_v1_chr2_-_140012447_140012489	1.55066	Nkx2-2	ENSMUST00000046030.8|Esf1|ENSMUSG00000045624.16|ESF1 nucleolar pre-rRNA processing protein homolog
mm39_v1_chr3_-_104771716_104771821	1.43172	Nkx2-2	ENSMUST00000195912.2|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1	ENSMUST00000094028.10|Capza1|ENSMUSG00000070372.12|capping protein (actin filament) muscle Z-line, alpha 1
mm39_v1_chr5_-_110987441_110987600	1.42389	Nkx2-2	ENSMUST00000145318.2|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr14_-_56026266_56026328	1.42021	Nkx2-2	ENSMUST00000168716.8|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3	ENSMUST00000178399.3|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3	ENSMUST00000022830.14|Ripk3|ENSMUSG00000022221.15|receptor-interacting serine-threonine kinase 3
mm39_v1_chr17_+_48653493_48653521	1.37266	Nkx2-2	ENSMUST00000113237.4|Trem2|ENSMUSG00000023992.15|triggering receptor expressed on myeloid cells 2
mm39_v1_chr17_+_43879366_43879384	1.27978	Nkx2-2	ENSMUST00000167418.8|Pla2g7|ENSMUSG00000023913.18|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
mm39_v1_chr5_+_110987839_110987888	1.27774	Nkx2-2	ENSMUST00000200172.2|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2	ENSMUST00000066160.3|Chek2|ENSMUSG00000029521.8|checkpoint kinase 2
mm39_v1_chr5_-_110987604_110987653	1.26883	Nkx2-2	ENSMUST00000056937.12|Hscb|ENSMUSG00000043510.13|HscB iron-sulfur cluster co-chaperone
mm39_v1_chr5_-_69749617_69749683	1.25948	Nkx2-2	ENSMUST00000173927.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000120789.8|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2	ENSMUST00000031117.13|Gnpda2|ENSMUSG00000029209.16|glucosamine-6-phosphate deaminase 2
mm39_v1_chr1_-_80255156_80255168	1.23241	Nkx2-2	ENSMUST00000168372.2|Cul3|ENSMUSG00000004364.15|cullin 3
mm39_v1_chr11_+_48691175_48691201	1.21665	Nkx2-2	ENSMUST00000020640.8|Rack1|ENSMUSG00000020372.16|receptor for activated C kinase 1
mm39_v1_chr15_-_10470575_10470613	1.20769	Nkx2-2	ENSMUST00000136591.8|Dnajc21|ENSMUSG00000044224.17|DnaJ heat shock protein family (Hsp40) member C21
mm39_v1_chrX_+_141608694_141608737	1.20763	Nkx2-2	ENSMUST00000112888.2|Tmem164|ENSMUSG00000047045.18|transmembrane protein 164
mm39_v1_chr13_+_104315301_104315374	1.20237	Nkx2-2	ENSMUST00000022225.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23	ENSMUST00000069187.12|Trim23|ENSMUSG00000021712.16|tripartite motif-containing 23
mm39_v1_chr9_+_51124983_51125008	1.19762	Nkx2-2	ENSMUST00000034554.9|Pou2af1|ENSMUSG00000032053.9|POU domain, class 2, associating factor 1
mm39_v1_chr13_+_38220971_38220971	1.18813	Nkx2-2	ENSMUST00000021866.10|Riok1|ENSMUSG00000021428.10|RIO kinase 1
mm39_v1_chr9_-_45896663_45896712	1.17644	Nkx2-2	ENSMUST00000214179.2|Pafah1b2|ENSMUSG00000003131.8|platelet-activating factor acetylhydrolase, isoform 1b, subunit 2
mm39_v1_chr1_-_152262425_152262436	1.1452	Nkx2-2	ENSMUST00000015124.15|Tsen15|ENSMUSG00000014980.15|tRNA splicing endonuclease subunit 15
mm39_v1_chr10_-_117681864_117681940	1.06022	Nkx2-2	ENSMUST00000064667.9|Rap1b|ENSMUSG00000052681.9|RAS related protein 1b
mm39_v1_chr13_-_76166789_76166866	1.0538	Nkx2-2	ENSMUST00000179078.9|Rfesd|ENSMUSG00000043190.15|Rieske (Fe-S) domain containing	ENSMUST00000167271.9|Rfesd|ENSMUSG00000043190.15|Rieske (Fe-S) domain containing
mm39_v1_chr11_-_79414542_79414588	1.04873	Nkx2-2	ENSMUST00000179322.2|Evi2b|ENSMUSG00000093938.3|ecotropic viral integration site 2b
mm39_v1_chr3_-_130524024_130524047	1.04622	Nkx2-2	ENSMUST00000079085.11|Rpl34|ENSMUSG00000062006.13|ribosomal protein L34
mm39_v1_chrX_+_74425990_74426005	1.00661	Nkx2-2	ENSMUST00000033541.5|Fundc2|ENSMUSG00000031198.5|FUN14 domain containing 2
mm39_v1_chr12_+_73948143_73948166	0.995535	Nkx2-2	ENSMUST00000110461.8|Hif1a|ENSMUSG00000021109.14|hypoxia inducible factor 1, alpha subunit
mm39_v1_chr13_-_21637830_21637870	0.993449	Nkx2-2	ENSMUST00000032820.15|Zscan26|ENSMUSG00000022228.15|zinc finger and SCAN domain containing 26
mm39_v1_chr17_+_71923210_71923254	0.988339	Nkx2-2	ENSMUST00000047086.10|Wdr43|ENSMUSG00000041057.11|WD repeat domain 43
mm39_v1_chr13_-_21637874_21637931	0.986768	Nkx2-2	ENSMUST00000110485.3|Zscan26|ENSMUSG00000022228.15|zinc finger and SCAN domain containing 26
mm39_v1_chr15_+_79578141_79578186	0.983283	Nkx2-2	ENSMUST00000230898.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1	ENSMUST00000229046.2|Gtpbp1|ENSMUSG00000042535.10|GTP binding protein 1
mm39_v1_chr14_-_72840373_72840471	0.969781	Nkx2-2	ENSMUST00000162825.8|Fndc3a|ENSMUSG00000033487.15|fibronectin type III domain containing 3A
mm39_v1_chr3_+_10431961_10432047	0.962843	Nkx2-2	ENSMUST00000029049.7|Chmp4c|ENSMUSG00000027536.7|charged multivesicular body protein 4C
mm39_v1_chr9_+_35470752_35470802	0.944381	Nkx2-2	ENSMUST00000034615.10|Pus3|ENSMUSG00000032103.11|pseudouridine synthase 3	ENSMUST00000121246.2|Pus3|ENSMUSG00000032103.11|pseudouridine synthase 3
mm39_v1_chr7_-_43182595_43182615	0.939644	Nkx2-2	ENSMUST00000205503.2|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chr10_+_25317309_25317509	0.93226	Nkx2-2	ENSMUST00000217929.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000220121.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr2_+_173918715_173918859	0.925926	Nkx2-2	ENSMUST00000087908.10|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000044638.13|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000156054.2|Stx16|ENSMUSG00000027522.16|syntaxin 16
mm39_v1_chr1_-_85664246_85664357	0.919476	Nkx2-2	ENSMUST00000064788.14|A630001G21Rik|ENSMUSG00000052760.17|RIKEN cDNA A630001G21 gene
mm39_v1_chr14_+_24540745_24540761	0.914098	Nkx2-2	ENSMUST00000112384.10|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chr13_-_113237505_113237522	0.91184	Nkx2-2	ENSMUST00000224282.2|Gzma|ENSMUSG00000023132.9|granzyme A	ENSMUST00000023897.7|Gzma|ENSMUSG00000023132.9|granzyme A
mm39_v1_chr14_+_24540815_24540835	0.882112	Nkx2-2	ENSMUST00000224568.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chr6_+_21985902_21985971	0.878939	Nkx2-2	ENSMUST00000115383.9|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr18_+_6765145_6765263	0.877742	Nkx2-2	ENSMUST00000234810.2|Rab18|ENSMUSG00000073639.7|RAB18, member RAS oncogene family	ENSMUST00000234626.2|Rab18|ENSMUSG00000073639.7|RAB18, member RAS oncogene family	ENSMUST00000097680.7|Rab18|ENSMUSG00000073639.7|RAB18, member RAS oncogene family
mm39_v1_chr14_+_24540777_24540798	0.869645	Nkx2-2	ENSMUST00000169826.3|Rps24|ENSMUSG00000025290.18|ribosomal protein S24	ENSMUST00000225023.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24	ENSMUST00000223999.2|Rps24|ENSMUSG00000025290.18|ribosomal protein S24
mm39_v1_chr6_-_120334382_120334396	0.869097	Nkx2-2	ENSMUST00000032283.12|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr13_-_20008397_20008439	0.867213	Nkx2-2	ENSMUST00000222664.2|Gpr141|ENSMUSG00000053101.4|G protein-coupled receptor 141	ENSMUST00000065335.3|Gpr141|ENSMUSG00000053101.4|G protein-coupled receptor 141
mm39_v1_chr6_+_8520006_8520058	0.860055	Nkx2-2	ENSMUST00000162567.8|Glcci1|ENSMUSG00000029638.18|glucocorticoid induced transcript 1	ENSMUST00000161217.8|Glcci1|ENSMUSG00000029638.18|glucocorticoid induced transcript 1
mm39_v1_chr8_+_124059414_124059480	0.857082	Nkx2-2	ENSMUST00000010298.7|Spire2|ENSMUSG00000010154.8|spire type actin nucleation factor 2
mm39_v1_chr1_+_40478926_40478943	0.853439	Nkx2-2	ENSMUST00000173514.8|Il1rl1|ENSMUSG00000026069.16|interleukin 1 receptor-like 1
mm39_v1_chr1_-_152262339_152262363	0.835441	Nkx2-2	ENSMUST00000162371.2|Tsen15|ENSMUSG00000014980.15|tRNA splicing endonuclease subunit 15
mm39_v1_chr14_-_104760051_104760143	0.827877	Nkx2-2	ENSMUST00000022716.4|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000228448.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1	ENSMUST00000227640.2|Obi1|ENSMUSG00000022120.5|ORC ubiquitin ligase 1
mm39_v1_chr4_-_15149755_15149794	0.820663	Nkx2-2	ENSMUST00000108273.2|Necab1|ENSMUSG00000040536.16|N-terminal EF-hand calcium binding protein 1
mm39_v1_chr3_-_146476331_146476536	0.817822	Nkx2-2	ENSMUST00000106138.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr16_-_30152708_30152708	0.816346	Nkx2-2	ENSMUST00000229503.2|Atp13a3|ENSMUSG00000022533.15|ATPase type 13A3
mm39_v1_chr4_+_124923785_124923863	0.805989	Nkx2-2	ENSMUST00000030684.8|Gnl2|ENSMUSG00000028869.14|guanine nucleotide binding protein-like 2 (nucleolar)
mm39_v1_chr19_-_6065872_6065927	0.803547	Nkx2-2	ENSMUST00000164843.10|Capn1|ENSMUSG00000024942.20|calpain 1
mm39_v1_chr10_-_88601443_88601534	0.801119	Nkx2-2	ENSMUST00000220188.2|Utp20|ENSMUSG00000004356.9|UTP20 small subunit processome component	ENSMUST00000218967.2|Utp20|ENSMUSG00000004356.9|UTP20 small subunit processome component
mm39_v1_chrX_+_163763588_163763721	0.760553	Nkx2-2	ENSMUST00000167446.8|Fancb|ENSMUSG00000047757.18|Fanconi anemia, complementation group B	ENSMUST00000057150.8|Fancb|ENSMUSG00000047757.18|Fanconi anemia, complementation group B
mm39_v1_chr7_-_122969064_122969144	0.745616	Nkx2-2	ENSMUST00000207010.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000167309.8|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000205262.2|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000106442.9|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17	ENSMUST00000098060.5|Arhgap17|ENSMUSG00000030766.16|Rho GTPase activating protein 17
mm39_v1_chr3_-_146475974_146476016	0.73858	Nkx2-2	ENSMUST00000106137.8|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr6_+_5390386_5390427	0.727981	Nkx2-2	ENSMUST00000183358.2|Asb4|ENSMUSG00000042607.16|ankyrin repeat and SOCS box-containing 4
mm39_v1_chr8_+_95393349_95393397	0.718935	Nkx2-2	ENSMUST00000109527.6|Arl2bp|ENSMUSG00000031776.18|ADP-ribosylation factor-like 2 binding protein
mm39_v1_chr2_+_170353338_170353480	0.718245	Nkx2-2	ENSMUST00000136839.2|Pfdn4|ENSMUSG00000052033.14|prefoldin 4	ENSMUST00000109148.8|Pfdn4|ENSMUSG00000052033.14|prefoldin 4	ENSMUST00000170167.8|Pfdn4|ENSMUSG00000052033.14|prefoldin 4
mm39_v1_chr10_+_22236451_22236451	0.714255	Nkx2-2	ENSMUST00000182677.8|Raet1d|ENSMUSG00000078452.11|retinoic acid early transcript delta
mm39_v1_chr1_-_173703424_173703430	0.710419	Nkx2-2	ENSMUST00000186442.7|Mndal|ENSMUSG00000090272.10|myeloid nuclear differentiation antigen like
mm39_v1_chr12_+_33003882_33003890	0.706305	Nkx2-2	ENSMUST00000076698.13|Sypl|ENSMUSG00000020570.16|synaptophysin-like protein
mm39_v1_chr15_+_6552270_6552346	0.690587	Nkx2-2	ENSMUST00000226412.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr6_+_21986445_21986595	0.679421	Nkx2-2	ENSMUST00000115382.8|Cped1|ENSMUSG00000062980.16|cadherin-like and PC-esterase domain containing 1
mm39_v1_chr13_+_23940964_23940996	0.66809	Nkx2-2	ENSMUST00000102965.4|H4c2|ENSMUSG00000069266.6|H4 clustered histone 2
mm39_v1_chr17_-_66191912_66191949	0.657491	Nkx2-2	ENSMUST00000024905.11|Ralbp1|ENSMUSG00000024096.18|ralA binding protein 1
mm39_v1_chr6_-_120334400_120334450	0.649894	Nkx2-2	ENSMUST00000112703.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr8_+_41692755_41692815	0.649361	Nkx2-2	ENSMUST00000210862.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000045218.9|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1	ENSMUST00000211247.2|Pcm1|ENSMUSG00000031592.11|pericentriolar material 1
mm39_v1_chr1_-_9818601_9818676	0.618503	Nkx2-2	ENSMUST00000057438.7|Vcpip1|ENSMUSG00000045210.9|valosin containing protein (p97)/p47 complex interacting protein 1
mm39_v1_chr14_+_76714350_76714371	0.611745	Nkx2-2	ENSMUST00000140251.9|Tsc22d1|ENSMUSG00000022010.20|TSC22 domain family, member 1
mm39_v1_chr13_-_103901010_103901090	0.610308	Nkx2-2	ENSMUST00000210489.2|Srek1|ENSMUSG00000032621.9|splicing regulatory glutamine/lysine-rich protein 1
mm39_v1_chr7_-_100504610_100504648	0.599277	Nkx2-2	ENSMUST00000156855.8|Relt|ENSMUSG00000008318.11|RELT tumor necrosis factor receptor
mm39_v1_chr2_+_62494622_62494644	0.597588	Nkx2-2	ENSMUST00000028257.3|Gca|ENSMUSG00000026893.5|grancalcin
mm39_v1_chr4_+_59626185_59626262	0.595004	Nkx2-2	ENSMUST00000070150.11|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene	ENSMUST00000052420.7|E130308A19Rik|ENSMUSG00000045071.15|RIKEN cDNA E130308A19 gene
mm39_v1_chr10_-_13199971_13200069	0.59431	Nkx2-2	ENSMUST00000105543.9|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr2_+_3705824_3705844	0.588156	Nkx2-2	ENSMUST00000115054.9|Fam107b|ENSMUSG00000026655.16|family with sequence similarity 107, member B
mm39_v1_chr3_-_59127571_59127680	0.576235	Nkx2-2	ENSMUST00000199675.2|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12	ENSMUST00000170388.6|P2ry12|ENSMUSG00000036353.14|purinergic receptor P2Y, G-protein coupled 12
mm39_v1_chr3_-_72875187_72875202	0.575868	Nkx2-2	ENSMUST00000167334.8|Sis|ENSMUSG00000027790.15|sucrase isomaltase (alpha-glucosidase)
mm39_v1_chrX_+_105070865_105070899	0.568518	Nkx2-2	ENSMUST00000113557.8|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr13_+_35059285_35059285	0.561315	Nkx2-2	ENSMUST00000077853.5|Prpf4b|ENSMUSG00000021413.10|pre-mRNA processing factor 4B
mm39_v1_chr4_+_3940747_3940854	0.560751	Nkx2-2	ENSMUST00000119403.2|Chchd7|ENSMUSG00000042198.13|coiled-coil-helix-coiled-coil-helix domain containing 7
mm39_v1_chrX_+_105070907_105070929	0.545884	Nkx2-2	ENSMUST00000055941.7|Atp7a|ENSMUSG00000033792.13|ATPase, Cu++ transporting, alpha polypeptide
mm39_v1_chr2_+_43638814_43638887	0.543318	Nkx2-2	ENSMUST00000112824.8|Arhgap15|ENSMUSG00000049744.16|Rho GTPase activating protein 15	ENSMUST00000055776.8|Arhgap15|ENSMUSG00000049744.16|Rho GTPase activating protein 15
mm39_v1_chr8_-_23747023_23747047	0.539371	Nkx2-2	ENSMUST00000121783.7|Golga7|ENSMUSG00000015341.18|golgi autoantigen, golgin subfamily a, 7
mm39_v1_chr2_-_58050494_58050507	0.525761	Nkx2-2	ENSMUST00000028175.7|Cytip|ENSMUSG00000026832.13|cytohesin 1 interacting protein
mm39_v1_chr8_-_23747057_23747102	0.524928	Nkx2-2	ENSMUST00000051094.9|Golga7|ENSMUSG00000015341.18|golgi autoantigen, golgin subfamily a, 7
mm39_v1_chr15_+_66542598_66542603	0.523745	Nkx2-2	ENSMUST00000065916.14|Tg|ENSMUSG00000053469.15|thyroglobulin
mm39_v1_chr5_+_76677150_76677228	0.516767	Nkx2-2	ENSMUST00000087133.11|Exoc1|ENSMUSG00000036435.14|exocyst complex component 1	ENSMUST00000113493.8|Exoc1|ENSMUSG00000036435.14|exocyst complex component 1	ENSMUST00000049469.13|Exoc1|ENSMUSG00000036435.14|exocyst complex component 1
mm39_v1_chrX_+_67864699_67864699	0.510413	Nkx2-2	ENSMUST00000096420.3|Gm14698|ENSMUSG00000071748.3|predicted gene 14698
mm39_v1_chr11_+_52265090_52265147	0.509435	Nkx2-2	ENSMUST00000020673.3|Vdac1|ENSMUSG00000020402.12|voltage-dependent anion channel 1
mm39_v1_chr7_+_120634834_120634885	0.509128	Nkx2-2	ENSMUST00000207351.2|Mettl9|ENSMUSG00000030876.8|methyltransferase like 9
mm39_v1_chr6_+_88442391_88442477	0.509095	Nkx2-2	ENSMUST00000032165.16|Ruvbl1|ENSMUSG00000030079.16|RuvB-like protein 1
mm39_v1_chr18_+_4993795_4993818	0.503573	Nkx2-2	ENSMUST00000153016.8|Svil|ENSMUSG00000024236.19|supervillin
mm39_v1_chr11_-_90281721_90281753	0.495634	Nkx2-2	ENSMUST00000004051.8|Hlf|ENSMUSG00000003949.17|hepatic leukemia factor
mm39_v1_chr19_-_11243530_11243605	0.491244	Nkx2-2	ENSMUST00000169159.3|Ms4a1|ENSMUSG00000024673.10|membrane-spanning 4-domains, subfamily A, member 1
mm39_v1_chr13_+_47347301_47347313	0.488911	Nkx2-2	ENSMUST00000110111.4|Rnf144b|ENSMUSG00000038068.16|ring finger protein 144B
mm39_v1_chr11_-_45845992_45846020	0.488356	Nkx2-2	ENSMUST00000109254.2|Thg1l|ENSMUSG00000011254.17|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
mm39_v1_chr11_+_75521800_75521902	0.488123	Nkx2-2	ENSMUST00000006286.9|Inpp5k|ENSMUSG00000006127.10|inositol polyphosphate 5-phosphatase K
mm39_v1_chr2_-_77776675_77776716	0.485683	Nkx2-2	ENSMUST00000111821.9|Cwc22|ENSMUSG00000027014.15|CWC22 spliceosome-associated protein	ENSMUST00000111818.8|Cwc22|ENSMUSG00000027014.15|CWC22 spliceosome-associated protein
mm39_v1_chrX_+_100317629_100317640	0.478703	Nkx2-2	ENSMUST00000117706.8|Med12|ENSMUSG00000079487.12|mediator complex subunit 12
mm39_v1_chr14_-_54923517_54923625	0.470009	Nkx2-2	ENSMUST00000125265.2|Acin1|ENSMUSG00000022185.20|apoptotic chromatin condensation inducer 1
mm39_v1_chr13_-_67080968_67081133	0.465449	Nkx2-2	ENSMUST00000172597.8|Mterf3|ENSMUSG00000021519.12|mitochondrial transcription termination factor 3	ENSMUST00000173773.2|Mterf3|ENSMUSG00000021519.12|mitochondrial transcription termination factor 3
mm39_v1_chr7_+_46490899_46490962	0.456734	Nkx2-2	ENSMUST00000147535.8|Ldha|ENSMUSG00000063229.16|lactate dehydrogenase A
mm39_v1_chrX_+_9751861_9751861	0.452457	Nkx2-2	ENSMUST00000067529.9|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5	ENSMUST00000086165.4|Sytl5|ENSMUSG00000054453.12|synaptotagmin-like 5
mm39_v1_chr6_+_68233361_68233373	0.452187	Nkx2-2	ENSMUST00000103320.3|Igkv14-111|ENSMUSG00000095771.3|immunoglobulin kappa variable 14-111
mm39_v1_chr4_+_125918333_125918348	0.450413	Nkx2-2	ENSMUST00000106162.8|Csf3r|ENSMUSG00000028859.15|colony stimulating factor 3 receptor (granulocyte)
mm39_v1_chr2_-_73284262_73284323	0.448537	Nkx2-2	ENSMUST00000102679.8|Wipf1|ENSMUSG00000075284.11|WAS/WASL interacting protein family, member 1
mm39_v1_chr7_-_43182504_43182580	0.437683	Nkx2-2	ENSMUST00000004728.12|Cd33|ENSMUSG00000004609.12|CD33 antigen
mm39_v1_chrX_-_100463810_100463970	0.43536	Nkx2-2	ENSMUST00000118092.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000119699.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3
mm39_v1_chr12_-_72455708_72455828	0.433456	Nkx2-2	ENSMUST00000078505.14|Rtn1|ENSMUSG00000021087.19|reticulon 1
mm39_v1_chr2_+_163503415_163503419	0.426655	Nkx2-2	ENSMUST00000135537.8|Pkig|ENSMUSG00000035268.15|protein kinase inhibitor, gamma
mm39_v1_chr17_+_29833760_29833796	0.426616	Nkx2-2	ENSMUST00000024817.15|Rnf8|ENSMUSG00000090083.12|ring finger protein 8	ENSMUST00000162588.3|Rnf8|ENSMUSG00000090083.12|ring finger protein 8
mm39_v1_chr12_+_59176506_59176541	0.425387	Nkx2-2	ENSMUST00000175912.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000176892.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr12_+_59176543_59176604	0.416359	Nkx2-2	ENSMUST00000069430.15|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000177370.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr17_+_71326510_71326517	0.410063	Nkx2-2	ENSMUST00000073211.13|Myom1|ENSMUSG00000024049.16|myomesin 1	ENSMUST00000024847.14|Myom1|ENSMUSG00000024049.16|myomesin 1
mm39_v1_chr9_-_119151428_119151517	0.397887	Nkx2-2	ENSMUST00000040853.11|Oxsr1|ENSMUSG00000036737.13|oxidative-stress responsive 1
mm39_v1_chr2_+_173918089_173918149	0.396554	Nkx2-2	ENSMUST00000155000.8|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000134876.8|Stx16|ENSMUSG00000027522.16|syntaxin 16	ENSMUST00000147038.8|Stx16|ENSMUSG00000027522.16|syntaxin 16
mm39_v1_chr10_-_13264574_13264714	0.38686	Nkx2-2	ENSMUST00000079698.7|Phactr2|ENSMUSG00000062866.17|phosphatase and actin regulator 2
mm39_v1_chr18_+_23886765_23886782	0.382029	Nkx2-2	ENSMUST00000115830.8|Mapre2|ENSMUSG00000024277.15|microtubule-associated protein, RP/EB family, member 2
mm39_v1_chr19_+_45035942_45036015	0.377297	Nkx2-2	ENSMUST00000237222.2|Sfxn3|ENSMUSG00000025212.18|sideroflexin 3	ENSMUST00000111954.11|Sfxn3|ENSMUSG00000025212.18|sideroflexin 3
mm39_v1_chr6_-_120334302_120334364	0.370615	Nkx2-2	ENSMUST00000163827.8|Ccdc77|ENSMUSG00000030177.15|coiled-coil domain containing 77
mm39_v1_chr10_-_59277570_59277630	0.369005	Nkx2-2	ENSMUST00000009798.5|Oit3|ENSMUSG00000009654.5|oncoprotein induced transcript 3
mm39_v1_chr9_-_107512566_107512584	0.368746	Nkx2-2	ENSMUST00000055704.12|Gnai2|ENSMUSG00000032562.14|guanine nucleotide binding protein (G protein), alpha inhibiting 2
mm39_v1_chr2_+_51962831_51962866	0.364985	Nkx2-2	ENSMUST00000112693.10|Rif1|ENSMUSG00000036202.17|replication timing regulatory factor 1
mm39_v1_chr7_+_128289261_128289304	0.362903	Nkx2-2	ENSMUST00000151237.5|Inpp5f|ENSMUSG00000042105.19|inositol polyphosphate-5-phosphatase F
mm39_v1_chr9_-_39863342_39863342	0.362236	Nkx2-2	ENSMUST00000216647.2|Olfr975|ENSMUSG00000043331.7|olfactory receptor 975
mm39_v1_chr6_-_97408367_97408417	0.358588	Nkx2-2	ENSMUST00000124050.3|Frmd4b|ENSMUSG00000030064.17|FERM domain containing 4B
mm39_v1_chr2_+_22959452_22959467	0.358558	Nkx2-2	ENSMUST00000155602.4|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr11_-_70895213_70895329	0.358055	Nkx2-2	ENSMUST00000124464.2|Dhx33|ENSMUSG00000040620.16|DEAH (Asp-Glu-Ala-His) box polypeptide 33	ENSMUST00000108527.8|Dhx33|ENSMUSG00000040620.16|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm39_v1_chr2_-_152857239_152857347	0.356959	Nkx2-2	ENSMUST00000028972.9|Pdrg1|ENSMUSG00000027472.15|p53 and DNA damage regulated 1
mm39_v1_chr11_+_57409484_57409521	0.354652	Nkx2-2	ENSMUST00000108849.8|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3	ENSMUST00000020830.14|Mfap3|ENSMUSG00000020522.14|microfibrillar-associated protein 3
mm39_v1_chr7_+_29467971_29467985	0.344111	Nkx2-2	ENSMUST00000032802.5|Zfp84|ENSMUSG00000046185.11|zinc finger protein 84
mm39_v1_chr3_-_79439181_79439193	0.332841	Nkx2-2	ENSMUST00000239298.2|Fnip2|ENSMUSG00000061175.13|folliculin interacting protein 2
mm39_v1_chr16_-_57427179_57427243	0.3288	Nkx2-2	ENSMUST00000114371.5|Cmss1|ENSMUSG00000022748.9|cms small ribosomal subunit 1	ENSMUST00000232413.2|Cmss1|ENSMUSG00000022748.9|cms small ribosomal subunit 1
mm39_v1_chrX_-_100463395_100463520	0.328431	Nkx2-2	ENSMUST00000117901.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000120201.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000117637.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000134005.2|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3	ENSMUST00000121520.8|Zmym3|ENSMUSG00000031310.17|zinc finger, MYM-type 3
mm39_v1_chr13_+_24798591_24798617	0.327863	Nkx2-2	ENSMUST00000091694.10|Ripor2|ENSMUSG00000036006.21|RHO family interacting cell polarization regulator 2
mm39_v1_chr1_+_179788675_179788675	0.326079	Nkx2-2	ENSMUST00000076687.12|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000097450.10|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000212756.2|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr18_-_84969601_84969661	0.325052	Nkx2-2	ENSMUST00000025547.4|Timm21|ENSMUSG00000024645.6|translocase of inner mitochondrial membrane 21
mm39_v1_chr19_+_34078333_34078399	0.324943	Nkx2-2	ENSMUST00000025685.8|Lipm|ENSMUSG00000056078.7|lipase, family member M
mm39_v1_chr9_-_96601574_96601618	0.322041	Nkx2-2	ENSMUST00000128269.8|Zbtb38|ENSMUSG00000040433.17|zinc finger and BTB domain containing 38
mm39_v1_chr17_+_43671314_43671345	0.321683	Nkx2-2	ENSMUST00000226087.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr2_+_127750978_127750978	0.314075	Nkx2-2	ENSMUST00000110344.2|Acoxl|ENSMUSG00000027380.11|acyl-Coenzyme A oxidase-like
mm39_v1_chr13_+_23755551_23755571	0.312521	Nkx2-2	ENSMUST00000079251.8|H2bc8|ENSMUSG00000058385.9|H2B clustered histone 8
mm39_v1_chr7_+_99934685_99934778	0.310404	Nkx2-2	ENSMUST00000057023.12|P4ha3|ENSMUSG00000051048.18|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide III
mm39_v1_chr10_+_87926932_87926939	0.30876	Nkx2-2	ENSMUST00000048621.8|Pmch|ENSMUSG00000035383.8|pro-melanin-concentrating hormone
mm39_v1_chrM_+_11735_11751	0.307741	Nkx2-2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm39_v1_chr6_+_145899155_145899310	0.304081	Nkx2-2	ENSMUST00000111701.2|Sspn|ENSMUSG00000030255.14|sarcospan
mm39_v1_chr15_-_36792649_36792674	0.303504	Nkx2-2	ENSMUST00000126184.2|Ywhaz|ENSMUSG00000022285.18|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm39_v1_chr14_-_49482846_49482931	0.301095	Nkx2-2	ENSMUST00000227113.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000130853.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000228936.2|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198	ENSMUST00000022398.15|ccdc198|ENSMUSG00000021850.15|coiled-coil domain containing 198
mm39_v1_chr9_+_3335135_3335161	0.298173	Nkx2-2	ENSMUST00000212294.2|Alkbh8|ENSMUSG00000025899.15|alkB homolog 8, tRNA methyltransferase
mm39_v1_chr1_-_65162267_65162373	0.287917	Nkx2-2	ENSMUST00000050047.4|D630023F18Rik|ENSMUSG00000044816.11|RIKEN cDNA D630023F18 gene	ENSMUST00000148020.8|D630023F18Rik|ENSMUSG00000044816.11|RIKEN cDNA D630023F18 gene
mm39_v1_chr6_+_136530970_136531002	0.280682	Nkx2-2	ENSMUST00000189535.2|Atf7ip|ENSMUSG00000030213.13|activating transcription factor 7 interacting protein
mm39_v1_chr17_+_71326542_71326558	0.27577	Nkx2-2	ENSMUST00000179759.3|Myom1|ENSMUSG00000024049.16|myomesin 1
mm39_v1_chr8_+_88925821_88925852	0.267873	Nkx2-2	ENSMUST00000066748.10|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000119033.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B	ENSMUST00000118952.8|Tent4b|ENSMUSG00000036779.13|terminal nucleotidyltransferase 4B
mm39_v1_chr6_+_67768007_67768030	0.26545	Nkx2-2	ENSMUST00000196006.5|Igkv14-130|ENSMUSG00000096461.6|immunoglobulin kappa variable 14-130	ENSMUST00000103307.3|Igkv14-130|ENSMUSG00000096461.6|immunoglobulin kappa variable 14-130
mm39_v1_chr8_-_25438784_25438846	0.26034	Nkx2-2	ENSMUST00000119720.8|Adam32|ENSMUSG00000037437.19|a disintegrin and metallopeptidase domain 32	ENSMUST00000121438.9|Adam32|ENSMUSG00000037437.19|a disintegrin and metallopeptidase domain 32
mm39_v1_chr1_-_87936242_87936278	0.24959	Nkx2-2	ENSMUST00000187758.7|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40	ENSMUST00000040783.11|Usp40|ENSMUSG00000005501.15|ubiquitin specific peptidase 40
mm39_v1_chr2_+_130509530_130509530	0.245036	Nkx2-2	ENSMUST00000103193.5|Itpa|ENSMUSG00000074797.12|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)
mm39_v1_chr9_+_38766356_38766356	0.243068	Nkx2-2	ENSMUST00000104874.3|Olfr26|ENSMUSG00000047667.6|olfactory receptor 26
mm39_v1_chr14_-_101846459_101846511	0.237108	Nkx2-2	ENSMUST00000161991.8|Tbc1d4|ENSMUSG00000033083.17|TBC1 domain family, member 4
mm39_v1_chr12_-_83534482_83534504	0.235341	Nkx2-2	ENSMUST00000177959.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3	ENSMUST00000178756.8|Dpf3|ENSMUSG00000021221.16|D4, zinc and double PHD fingers, family 3
mm39_v1_chr15_-_102259158_102259209	0.233061	Nkx2-2	ENSMUST00000231061.2|Aaas|ENSMUSG00000036678.9|achalasia, adrenocortical insufficiency, alacrimia	ENSMUST00000041208.9|Aaas|ENSMUSG00000036678.9|achalasia, adrenocortical insufficiency, alacrimia
mm39_v1_chr6_-_69020489_69020543	0.232146	Nkx2-2	ENSMUST00000103342.4|Igkv4-79|ENSMUSG00000076541.4|immunoglobulin kappa variable 4-79
mm39_v1_chr13_-_8908798_8908865	0.231407	Nkx2-2	ENSMUST00000176329.8|Wdr37|ENSMUSG00000021147.18|WD repeat domain 37
mm39_v1_chr11_+_118334297_118334364	0.228067	Nkx2-2	ENSMUST00000133558.3|C1qtnf1|ENSMUSG00000017446.15|C1q and tumor necrosis factor related protein 1
mm39_v1_chr9_+_105272507_105272614	0.226389	Nkx2-2	ENSMUST00000035181.10|Aste1|ENSMUSG00000032567.17|asteroid homolog 1	ENSMUST00000123807.8|Aste1|ENSMUSG00000032567.17|asteroid homolog 1
mm39_v1_chr1_-_155910546_155910563	0.225735	Nkx2-2	ENSMUST00000169241.8|Tor1aip1|ENSMUSG00000026466.17|torsin A interacting protein 1
mm39_v1_chr2_-_26270612_26270666	0.220874	Nkx2-2	ENSMUST00000114115.9|Snapc4|ENSMUSG00000036281.14|small nuclear RNA activating complex, polypeptide 4	ENSMUST00000035427.11|Snapc4|ENSMUSG00000036281.14|small nuclear RNA activating complex, polypeptide 4
mm39_v1_chr11_-_110142565_110142602	0.212739	Nkx2-2	ENSMUST00000044003.14|Abca6|ENSMUSG00000044749.14|ATP-binding cassette, sub-family A (ABC1), member 6
mm39_v1_chr7_-_43906802_43906802	0.212357	Nkx2-2	ENSMUST00000107945.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4	ENSMUST00000118216.8|Acp4|ENSMUSG00000012777.15|acid phosphatase 4
mm39_v1_chr6_+_67873135_67873156	0.203969	Nkx2-2	ENSMUST00000103310.3|Igkv14-126|ENSMUSG00000094345.3|immunoglobulin kappa variable 14-126
mm39_v1_chr3_+_68776884_68776921	0.203503	Nkx2-2	ENSMUST00000054551.3|1110032F04Rik|ENSMUSG00000046999.3|RIKEN cDNA 1110032F04 gene
mm39_v1_chr5_+_100187844_100187938	0.203502	Nkx2-2	ENSMUST00000169390.8|Enoph1|ENSMUSG00000029326.14|enolase-phosphatase 1	ENSMUST00000031268.8|Enoph1|ENSMUSG00000029326.14|enolase-phosphatase 1
mm39_v1_chr10_+_57521930_57521954	0.203049	Nkx2-2	ENSMUST00000177325.8|Pkib|ENSMUSG00000019876.16|protein kinase inhibitor beta, cAMP dependent, testis specific
mm39_v1_chr14_+_61835675_61835702	0.202664	Nkx2-2	ENSMUST00000165015.9|Trim13|ENSMUSG00000035235.14|tripartite motif-containing 13
mm39_v1_chr16_-_85347305_85347321	0.202375	Nkx2-2	ENSMUST00000175700.8|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1	ENSMUST00000114174.3|Cyyr1|ENSMUSG00000041134.16|cysteine and tyrosine-rich protein 1
mm39_v1_chr2_+_22959223_22959339	0.19948	Nkx2-2	ENSMUST00000114523.10|Acbd5|ENSMUSG00000026781.18|acyl-Coenzyme A binding domain containing 5
mm39_v1_chr7_+_101512922_101512978	0.19917	Nkx2-2	ENSMUST00000209334.2|Anapc15|ENSMUSG00000030649.19|anaphase promoting complex C subunit 15
mm39_v1_chr6_-_102441628_102441628	0.197952	Nkx2-2	ENSMUST00000032159.7|Cntn3|ENSMUSG00000030075.11|contactin 3
mm39_v1_chr19_+_13208692_13208692	0.196046	Nkx2-2	ENSMUST00000207246.4|Olfr1463|ENSMUSG00000096365.5|olfactory receptor 1463
mm39_v1_chr2_-_125602234_125602321	0.195871	Nkx2-2	ENSMUST00000139944.2|Secisbp2l|ENSMUSG00000035093.17|SECIS binding protein 2-like
mm39_v1_chr8_+_107757847_107757862	0.195165	Nkx2-2	ENSMUST00000034388.10|Vps4a|ENSMUSG00000031913.10|vacuolar protein sorting 4A
mm39_v1_chr19_-_46950948_46951018	0.194949	Nkx2-2	ENSMUST00000236924.2|Nt5c2|ENSMUSG00000025041.18|5'-nucleotidase, cytosolic II
mm39_v1_chr1_-_39616445_39616508	0.193676	Nkx2-2	ENSMUST00000062525.11|Rnf149|ENSMUSG00000048234.14|ring finger protein 149
mm39_v1_chr11_+_68393845_68393902	0.182786	Nkx2-2	ENSMUST00000102613.8|Pik3r6|ENSMUSG00000046207.15|phosphoinositide-3-kinase regulatory subunit 5	ENSMUST00000060441.7|Pik3r6|ENSMUSG00000046207.15|phosphoinositide-3-kinase regulatory subunit 5
mm39_v1_chr4_+_133097013_133097020	0.180516	Nkx2-2	ENSMUST00000030669.8|Slc9a1|ENSMUSG00000028854.10|solute carrier family 9 (sodium/hydrogen exchanger), member 1
mm39_v1_chr6_+_29859685_29859709	0.171515	Nkx2-2	ENSMUST00000134438.2|Ahcyl2|ENSMUSG00000029772.18|S-adenosylhomocysteine hydrolase-like 2
mm39_v1_chr2_-_87838612_87838612	0.170708	Nkx2-2	ENSMUST00000215457.2|Olfr1160|ENSMUSG00000075141.6|olfactory receptor 1160
mm39_v1_chr11_+_120348919_120348973	0.158455	Nkx2-2	ENSMUST00000058370.14|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000175970.8|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137	ENSMUST00000176120.2|Ccdc137|ENSMUSG00000049957.15|coiled-coil domain containing 137
mm39_v1_chr8_-_37420293_37420314	0.150967	Nkx2-2	ENSMUST00000179501.2|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr2_-_111253457_111253460	0.149712	Nkx2-2	ENSMUST00000213210.2|Olfr1286|ENSMUSG00000096703.4|olfactory receptor 1286	ENSMUST00000184954.4|Olfr1286|ENSMUSG00000096703.4|olfactory receptor 1286
mm39_v1_chr7_+_127836502_127836559	0.148856	Nkx2-2	ENSMUST00000044660.6|Armc5|ENSMUSG00000042178.7|armadillo repeat containing 5
mm39_v1_chr9_+_104930438_104930502	0.144059	Nkx2-2	ENSMUST00000149243.8|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3	ENSMUST00000035177.15|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3	ENSMUST00000214036.2|Mrpl3|ENSMUSG00000032563.17|mitochondrial ribosomal protein L3
mm39_v1_chr3_+_75982890_75982890	0.143517	Nkx2-2	ENSMUST00000160261.8|Fstl5|ENSMUSG00000034098.15|follistatin-like 5
mm39_v1_chr17_+_38112070_38112070	0.138772	Nkx2-2	ENSMUST00000217365.2|Olfr124|ENSMUSG00000044985.7|olfactory receptor 124
mm39_v1_chr2_+_21210527_21210598	0.138183	Nkx2-2	ENSMUST00000054591.10|Thnsl1|ENSMUSG00000048550.18|threonine synthase-like 1 (bacterial)	ENSMUST00000102952.8|Thnsl1|ENSMUSG00000048550.18|threonine synthase-like 1 (bacterial)	ENSMUST00000138965.8|Thnsl1|ENSMUSG00000048550.18|threonine synthase-like 1 (bacterial)	ENSMUST00000138914.8|Thnsl1|ENSMUSG00000048550.18|threonine synthase-like 1 (bacterial)	ENSMUST00000102951.2|Thnsl1|ENSMUSG00000048550.18|threonine synthase-like 1 (bacterial)
mm39_v1_chr3_-_115800989_115801060	0.13806	Nkx2-2	ENSMUST00000067485.4|Slc30a7|ENSMUSG00000054414.5|solute carrier family 30 (zinc transporter), member 7
mm39_v1_chr17_-_37523969_37524009	0.137778	Nkx2-2	ENSMUST00000060728.7|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95	ENSMUST00000216318.2|Olfr95|ENSMUSG00000049561.10|olfactory receptor 95
mm39_v1_chr12_-_100865783_100865840	0.136313	Nkx2-2	ENSMUST00000053668.10|Gpr68|ENSMUSG00000047415.13|G protein-coupled receptor 68
mm39_v1_chr11_+_96209093_96209093	0.133856	Nkx2-2	ENSMUST00000049241.9|Hoxb4|ENSMUSG00000038692.9|homeobox B4
mm39_v1_chr3_-_92594516_92594518	0.132392	Nkx2-2	ENSMUST00000029524.4|Lce1d|ENSMUSG00000103243.2|late cornified envelope 1D
mm39_v1_chr17_+_79359617_79359696	0.128781	Nkx2-2	ENSMUST00000233916.2|Qpct|ENSMUSG00000024084.9|glutaminyl-peptide cyclotransferase (glutaminyl cyclase)
mm39_v1_chr2_-_77776719_77776737	0.127256	Nkx2-2	ENSMUST00000065889.10|Cwc22|ENSMUSG00000027014.15|CWC22 spliceosome-associated protein
mm39_v1_chr5_+_31771281_31771323	0.124796	Nkx2-2	ENSMUST00000031024.14|Mrpl33|ENSMUSG00000106918.4|mitochondrial ribosomal protein L33	ENSMUST00000202033.2|Gm43809|ENSMUSG00000105617.5|predicted gene 43809
mm39_v1_chr6_+_67816777_67816777	0.124515	Nkx2-2	ENSMUST00000200578.5|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129	ENSMUST00000103308.3|Igkv9-129|ENSMUSG00000093906.6|immunoglobulin kappa variable 9-129
mm39_v1_chr10_+_126814542_126814618	0.121773	Nkx2-2	ENSMUST00000105256.10|Ctdsp2|ENSMUSG00000078429.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm39_v1_chr1_-_66984178_66984302	0.11919	Nkx2-2	ENSMUST00000027151.12|Myl1|ENSMUSG00000061816.16|myosin, light polypeptide 1
mm39_v1_chr3_-_57559088_57559148	0.119148	Nkx2-2	ENSMUST00000160959.8|Commd2|ENSMUSG00000036513.16|COMM domain containing 2
mm39_v1_chr7_-_103094646_103094646	0.110221	Nkx2-2	ENSMUST00000215417.2|Olfr605|ENSMUSG00000109659.4|olfactory receptor 605
mm39_v1_chr16_+_14523696_14523722	0.10896	Nkx2-2	ENSMUST00000023356.8|Snai2|ENSMUSG00000022676.8|snail family zinc finger 2
mm39_v1_chr18_-_61919707_61919773	0.107783	Nkx2-2	ENSMUST00000120472.2|Afap1l1|ENSMUSG00000033032.16|actin filament associated protein 1-like 1
mm39_v1_chr11_+_88864753_88864787	0.105624	Nkx2-2	ENSMUST00000036649.8|Coil|ENSMUSG00000033983.15|coilin
mm39_v1_chr1_+_106866678_106866693	0.102617	Nkx2-2	ENSMUST00000112724.3|Serpinb12|ENSMUSG00000059956.15|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm39_v1_chr10_-_89568106_89568187	0.0974185	Nkx2-2	ENSMUST00000020109.5|Actr6|ENSMUSG00000019948.5|ARP6 actin-related protein 6
mm39_v1_chr19_+_55169148_55169317	0.0963226	Nkx2-2	ENSMUST00000154886.8|Tectb|ENSMUSG00000024979.14|tectorin beta	ENSMUST00000120936.8|Tectb|ENSMUSG00000024979.14|tectorin beta	ENSMUST00000025936.12|Tectb|ENSMUSG00000024979.14|tectorin beta
mm39_v1_chr10_+_79500387_79500398	0.0924588	Nkx2-2	ENSMUST00000020554.8|Madcam1|ENSMUSG00000020310.10|mucosal vascular addressin cell adhesion molecule 1
mm39_v1_chr9_-_108305683_108305683	0.0924392	Nkx2-2	ENSMUST00000076592.4|Iho1|ENSMUSG00000047220.6|interactor of HORMAD1 1
mm39_v1_chr1_-_155910567_155910626	0.0840455	Nkx2-2	ENSMUST00000141878.8|Tor1aip1|ENSMUSG00000026466.17|torsin A interacting protein 1
mm39_v1_chr9_+_3005126_3005159	0.0831576	Nkx2-2	ENSMUST00000179881.2|Gm11168|ENSMUSG00000096385.8|predicted gene 11168
mm39_v1_chr4_-_45532470_45532470	0.0797255	Nkx2-2	ENSMUST00000147448.2|Shb|ENSMUSG00000044813.16|src homology 2 domain-containing transforming protein B
mm39_v1_chr1_-_39616369_39616393	0.0775723	Nkx2-2	ENSMUST00000195705.2|Rnf149|ENSMUSG00000048234.14|ring finger protein 149
mm39_v1_chr7_+_19079058_19079074	0.0768226	Nkx2-2	ENSMUST00000160369.8|Ercc1|ENSMUSG00000003549.10|excision repair cross-complementing rodent repair deficiency, complementation group 1
mm39_v1_chr9_+_39818632_39818632	0.0761063	Nkx2-2	ENSMUST00000214904.2|Olfr229|ENSMUSG00000095390.3|olfactory receptor 229
mm39_v1_chr8_-_79975199_79975209	0.0738797	Nkx2-2	ENSMUST00000034109.6|1700011L22Rik|ENSMUSG00000031682.6|RIKEN cDNA 1700011L22 gene
mm39_v1_chr16_+_14398085_14398085	0.0737792	Nkx2-2	ENSMUST00000147024.8|A630010A05Rik|ENSMUSG00000075395.12|RIKEN cDNA A630010A05 gene
mm39_v1_chr16_-_16345197_16345282	0.0705195	Nkx2-2	ENSMUST00000069284.14|Fgd4|ENSMUSG00000022788.17|FYVE, RhoGEF and PH domain containing 4
mm39_v1_chr18_-_12438695_12438854	0.0700304	Nkx2-2	ENSMUST00000122408.8|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000234183.2|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000142066.2|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29	ENSMUST00000118525.9|Ankrd29|ENSMUSG00000057766.15|ankyrin repeat domain 29
mm39_v1_chrX_+_106192510_106192569	0.0682974	Nkx2-2	ENSMUST00000147521.8|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B	ENSMUST00000167673.2|P2ry10b|ENSMUSG00000054293.11|purinergic receptor P2Y, G-protein coupled 10B
mm39_v1_chr1_-_165830187_165830247	0.067078	Nkx2-2	ENSMUST00000184643.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160908.8|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000027850.15|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1	ENSMUST00000160260.9|Pou2f1|ENSMUSG00000026565.19|POU domain, class 2, transcription factor 1
mm39_v1_chr13_-_76453191_76453191	0.0660461	Nkx2-2	ENSMUST00000208418.2|Fam81b|ENSMUSG00000109228.3|family with sequence similarity 81, member B
mm39_v1_chr3_-_92922976_92922999	0.0657498	Nkx2-2	ENSMUST00000107301.2|Crct1|ENSMUSG00000027913.6|cysteine-rich C-terminal 1	ENSMUST00000029521.5|Crct1|ENSMUSG00000027913.6|cysteine-rich C-terminal 1
mm39_v1_chr10_-_129577771_129577790	0.0646372	Nkx2-2	ENSMUST00000215142.3|Olfr806|ENSMUSG00000071065.7|olfactory receptor 806	ENSMUST00000213239.2|Olfr806|ENSMUSG00000071065.7|olfactory receptor 806
mm39_v1_chr4_-_43010225_43010355	0.0637511	Nkx2-2	ENSMUST00000030165.5|Fancg|ENSMUSG00000028453.11|Fanconi anemia, complementation group G
mm39_v1_chr9_+_3034599_3034599	0.0632266	Nkx2-2	ENSMUST00000178641.2|Gm17535|ENSMUSG00000096736.2|predicted gene, 17535
mm39_v1_chr12_+_38831093_38831128	0.0624419	Nkx2-2	ENSMUST00000161513.9|Etv1|ENSMUSG00000004151.18|ets variant 1
mm39_v1_chr5_+_106024398_106024451	0.0599552	Nkx2-2	ENSMUST00000150440.8|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326	ENSMUST00000031227.11|Zfp326|ENSMUSG00000029290.13|zinc finger protein 326
mm39_v1_chr6_+_68402550_68402568	0.0599388	Nkx2-2	ENSMUST00000103323.3|Igkv16-104|ENSMUSG00000076522.3|immunoglobulin kappa variable 16-104
mm39_v1_chr14_+_53994813_53994813	0.0598436	Nkx2-2	ENSMUST00000180380.3|Trav13-4-dv7|ENSMUSG00000094562.6|T cell receptor alpha variable 13-4-DV7
mm39_v1_chr1_-_66902429_66902444	0.0574707	Nkx2-2	ENSMUST00000027153.6|Acadl|ENSMUSG00000026003.6|acyl-Coenzyme A dehydrogenase, long-chain
mm39_v1_chr3_+_40585435_40585581	0.0541255	Nkx2-2	ENSMUST00000061590.6|Intu|ENSMUSG00000060798.8|inturned planar cell polarity protein
mm39_v1_chr6_+_97968737_97968882	0.0499633	Nkx2-2	ENSMUST00000043628.13|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor	ENSMUST00000203938.2|Mitf|ENSMUSG00000035158.16|melanogenesis associated transcription factor
mm39_v1_chr5_+_67126304_67126475	0.0498556	Nkx2-2	ENSMUST00000132991.5|Limch1|ENSMUSG00000037736.21|LIM and calponin homology domains 1
mm39_v1_chr9_+_19493913_19493913	0.0497578	Nkx2-2	ENSMUST00000215587.2|Olfr855|ENSMUSG00000043087.6|olfactory receptor 855
mm39_v1_chr8_+_46984016_46984101	0.0491296	Nkx2-2	ENSMUST00000152423.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr2_-_24985137_24985151	0.0489606	Nkx2-2	ENSMUST00000114373.8|Noxa1|ENSMUSG00000036805.14|NADPH oxidase activator 1
mm39_v1_chr1_-_97904958_97905006	0.0470816	Nkx2-2	ENSMUST00000161567.8|Pam|ENSMUSG00000026335.17|peptidylglycine alpha-amidating monooxygenase
mm39_v1_chr18_+_44403169_44403203	0.0456139	Nkx2-2	ENSMUST00000042747.4|Npy6r|ENSMUSG00000038071.4|neuropeptide Y receptor Y6
mm39_v1_chrX_+_84091915_84092019	0.0433881	Nkx2-2	ENSMUST00000239019.2|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy	ENSMUST00000113992.3|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy	ENSMUST00000113991.8|Dmd|ENSMUSG00000045103.20|dystrophin, muscular dystrophy
mm39_v1_chr13_+_14804739_14804881	0.0414188	Nkx2-2	ENSMUST00000178289.3|AW209491|ENSMUSG00000039182.7|expressed sequence AW209491	ENSMUST00000038690.6|AW209491|ENSMUSG00000039182.7|expressed sequence AW209491	ENSMUST00000222052.2|AW209491|ENSMUSG00000039182.7|expressed sequence AW209491
mm39_v1_chr14_-_59632830_59632830	0.0395053	Nkx2-2	ENSMUST00000166912.3|Phf11c|ENSMUSG00000091144.3|PHD finger protein 11C
mm39_v1_chr2_-_105734829_105734909	0.0388924	Nkx2-2	ENSMUST00000122965.8|Elp4|ENSMUSG00000027167.12|elongator acetyltransferase complex subunit 4
mm39_v1_chr18_-_73887528_73887575	0.0374801	Nkx2-2	ENSMUST00000041138.3|Elac1|ENSMUSG00000036941.3|elaC ribonuclease Z 1
mm39_v1_chr6_+_85428464_85428496	0.0349517	Nkx2-2	ENSMUST00000032078.9|Cct7|ENSMUSG00000030007.9|chaperonin containing Tcp1, subunit 7 (eta)
mm39_v1_chr19_-_8109346_8109346	0.0281793	Nkx2-2	ENSMUST00000065651.5|Slc22a28|ENSMUSG00000063590.4|solute carrier family 22, member 28
mm39_v1_chr7_+_121333700_121333711	0.0275505	Nkx2-2	ENSMUST00000000221.6|Scnn1g|ENSMUSG00000000216.9|sodium channel, nonvoltage-gated 1 gamma
mm39_v1_chr11_+_66847446_66847493	0.0252181	Nkx2-2	ENSMUST00000211300.2|Tmem238l|ENSMUSG00000085683.3|transmembrane protein 238 like	ENSMUST00000150220.2|Tmem238l|ENSMUSG00000085683.3|transmembrane protein 238 like
mm39_v1_chr3_-_84212069_84212116	0.0241811	Nkx2-2	ENSMUST00000107692.8|Trim2|ENSMUSG00000027993.17|tripartite motif-containing 2
mm39_v1_chr17_+_79919267_79919292	0.0224955	Nkx2-2	ENSMUST00000223924.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr7_-_42442949_42442949	0.0208147	Nkx2-2	ENSMUST00000169130.3|Vmn2r62|ENSMUSG00000091926.4|vomeronasal 2, receptor 62
mm39_v1_chr8_+_40807344_40807344	0.0206668	Nkx2-2	ENSMUST00000136835.2|Micu3|ENSMUSG00000039478.16|mitochondrial calcium uptake family, member 3
mm39_v1_chr1_+_72750418_72750454	0.0148209	Nkx2-2	ENSMUST00000059980.11|Rpl37a|ENSMUSG00000046330.11|ribosomal protein L37a
mm39_v1_chr5_-_88675700_88675750	0.0136998	Nkx2-2	ENSMUST00000087033.6|Jchain|ENSMUSG00000067149.7|immunoglobulin joining chain
mm39_v1_chr2_-_113844100_113844116	0.00810768	Nkx2-2	ENSMUST00000090275.5|Gjd2|ENSMUSG00000068615.5|gap junction protein, delta 2
mm39_v1_chr7_-_48145873_48145873	0.00802896	Nkx2-2	ENSMUST00000186394.2|Mrgprx2|ENSMUSG00000074109.5|MAS-related GPR, member X2
mm39_v1_chr11_-_73800125_73800125	0.00790672	Nkx2-2	ENSMUST00000215690.2|Olfr395|ENSMUSG00000062186.3|olfactory receptor 395
mm39_v1_chr3_-_98471301_98471301	0.00391082	Nkx2-2	ENSMUST00000058728.10|Gm10681|ENSMUSG00000095388.8|predicted gene 10681
mm39_v1_chr3_+_94350622_94350652	0.00368016	Nkx2-2	ENSMUST00000029786.14|Mrpl9|ENSMUSG00000028140.14|mitochondrial ribosomal protein L9	ENSMUST00000196143.2|Mrpl9|ENSMUSG00000028140.14|mitochondrial ribosomal protein L9
mm39_v1_chr6_+_68495964_68495996	0.00276708	Nkx2-2	ENSMUST00000199510.5|Igkv14-100|ENSMUSG00000096515.6|immunoglobulin kappa chain variable 14-100	ENSMUST00000103325.3|Igkv14-100|ENSMUSG00000096515.6|immunoglobulin kappa chain variable 14-100
mm39_v1_chr6_+_40619913_40619937	0.00117862	Nkx2-2	ENSMUST00000238599.2|Mgam|ENSMUSG00000068587.11|maltase-glucoamylase
