mm39_v1_chr7_-_142215595_142215617	3.98202	Hoxa9_Hoxb9	ENSMUST00000145896.3|Igf2|ENSMUSG00000048583.17|insulin-like growth factor 2
mm39_v1_chr1_-_45542442_45542442	1.32426	Hoxa9_Hoxb9	ENSMUST00000086430.5|Col5a2|ENSMUSG00000026042.17|collagen, type V, alpha 2
mm39_v1_chr17_-_43813664_43813703	1.3087	Hoxa9_Hoxb9	ENSMUST00000024707.9|Mep1a|ENSMUSG00000023914.17|meprin 1 alpha	ENSMUST00000117137.8|Mep1a|ENSMUSG00000023914.17|meprin 1 alpha
mm39_v1_chr18_+_20380397_20380397	0.948223	Hoxa9_Hoxb9	ENSMUST00000054128.7|Dsg1c|ENSMUSG00000034774.7|desmoglein 1 gamma
mm39_v1_chr10_+_128745214_128745313	0.683198	Hoxa9_Hoxb9	ENSMUST00000220308.2|Cd63|ENSMUSG00000025351.15|CD63 antigen
mm39_v1_chr2_-_151586063_151586125	0.671133	Hoxa9_Hoxb9	ENSMUST00000109869.2|Psmf1|ENSMUSG00000032869.16|proteasome (prosome, macropain) inhibitor subunit 1
mm39_v1_chr2_+_163348728_163348780	0.530606	Hoxa9_Hoxb9	ENSMUST00000143911.8|Hnf4a|ENSMUSG00000017950.17|hepatic nuclear factor 4, alpha
mm39_v1_chr3_+_98187743_98187760	0.517385	Hoxa9_Hoxb9	ENSMUST00000120541.8|Hmgcs2|ENSMUSG00000027875.13|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	ENSMUST00000090746.3|Hmgcs2|ENSMUSG00000027875.13|3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2
mm39_v1_chr8_-_4155758_4155835	0.457548	Hoxa9_Hoxb9	ENSMUST00000138439.2|Cd209f|ENSMUSG00000051906.16|CD209f antigen	ENSMUST00000145007.8|Cd209f|ENSMUSG00000051906.16|CD209f antigen
mm39_v1_chr2_+_58645189_58645224	0.449176	Hoxa9_Hoxb9	ENSMUST00000102755.4|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000230627.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000229923.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr19_-_7319157_7319195	0.416208	Hoxa9_Hoxb9	ENSMUST00000164205.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000165286.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000168324.2|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2	ENSMUST00000032557.15|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr2_+_58644922_58644954	0.393725	Hoxa9_Hoxb9	ENSMUST00000059102.13|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr14_-_70561231_70561263	0.389682	Hoxa9_Hoxb9	ENSMUST00000151011.8|Slc39a14|ENSMUSG00000022094.16|solute carrier family 39 (zinc transporter), member 14
mm39_v1_chr19_-_56536646_56536696	0.384344	Hoxa9_Hoxb9	ENSMUST00000182276.2|Dclre1a|ENSMUSG00000025077.14|DNA cross-link repair 1A
mm39_v1_chr6_+_29694181_29694247	0.364174	Hoxa9_Hoxb9	ENSMUST00000046750.14|Tspan33|ENSMUSG00000001763.15|tetraspanin 33	ENSMUST00000115250.4|Tspan33|ENSMUSG00000001763.15|tetraspanin 33
mm39_v1_chr2_+_80145805_80145855	0.363908	Hoxa9_Hoxb9	ENSMUST00000028392.8|Dnajc10|ENSMUSG00000027006.14|DnaJ heat shock protein family (Hsp40) member C10
mm39_v1_chr4_-_136329953_136330071	0.363731	Hoxa9_Hoxb9	ENSMUST00000105847.8|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A	ENSMUST00000116273.9|Kdm1a|ENSMUSG00000036940.16|lysine (K)-specific demethylase 1A
mm39_v1_chrX_-_133442596_133442649	0.343439	Hoxa9_Hoxb9	ENSMUST00000054213.5|Timm8a1|ENSMUSG00000048007.5|translocase of inner mitochondrial membrane 8A1
mm39_v1_chr17_+_36172210_36172232	0.333891	Hoxa9_Hoxb9	ENSMUST00000074259.15|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)	ENSMUST00000174873.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr5_+_145141333_145141478	0.332534	Hoxa9_Hoxb9	ENSMUST00000085671.10|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5	ENSMUST00000031601.8|Zkscan5|ENSMUSG00000055991.16|zinc finger with KRAB and SCAN domains 5
mm39_v1_chr8_+_4184652_4184725	0.327773	Hoxa9_Hoxb9	ENSMUST00000130372.3|Cd209g|ENSMUSG00000079168.5|CD209g antigen
mm39_v1_chr3_+_57332735_57332873	0.322083	Hoxa9_Hoxb9	ENSMUST00000029377.8|Tm4sf4|ENSMUSG00000027801.8|transmembrane 4 superfamily member 4
mm39_v1_chr15_+_6552270_6552346	0.3118	Hoxa9_Hoxb9	ENSMUST00000226412.2|Fyb|ENSMUSG00000022148.17|FYN binding protein
mm39_v1_chr15_-_51855073_51855159	0.307399	Hoxa9_Hoxb9	ENSMUST00000022927.11|Rad21|ENSMUSG00000022314.11|RAD21 cohesin complex component
mm39_v1_chr9_-_56151334_56151382	0.294644	Hoxa9_Hoxb9	ENSMUST00000188142.7|Peak1|ENSMUSG00000074305.10|pseudopodium-enriched atypical kinase 1
mm39_v1_chr6_-_87958611_87958626	0.289886	Hoxa9_Hoxb9	ENSMUST00000056403.7|H1f10|ENSMUSG00000044927.7|H1.10 linker histone
mm39_v1_chr2_-_27354006_27354128	0.277729	Hoxa9_Hoxb9	ENSMUST00000164296.8|Brd3|ENSMUSG00000026918.17|bromodomain containing 3
mm39_v1_chr15_+_81820954_81821038	0.268543	Hoxa9_Hoxb9	ENSMUST00000038757.8|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding	ENSMUST00000230633.2|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding
mm39_v1_chr3_+_66892979_66893026	0.267493	Hoxa9_Hoxb9	ENSMUST00000162362.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065074.14|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065047.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr6_-_139478919_139478974	0.263675	Hoxa9_Hoxb9	ENSMUST00000170650.3|Rergl|ENSMUSG00000092164.3|RERG/RAS-like
mm39_v1_chr9_-_63929308_63929357	0.262304	Hoxa9_Hoxb9	ENSMUST00000179458.2|Smad6|ENSMUSG00000036867.8|SMAD family member 6	ENSMUST00000041029.6|Smad6|ENSMUSG00000036867.8|SMAD family member 6
mm39_v1_chr2_-_51039112_51039127	0.259904	Hoxa9_Hoxb9	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr2_-_80277969_80277969	0.254538	Hoxa9_Hoxb9	ENSMUST00000028389.4|Frzb|ENSMUSG00000027004.4|frizzled-related protein
mm39_v1_chr19_+_56536685_56536716	0.246714	Hoxa9_Hoxb9	ENSMUST00000071423.7|Nhlrc2|ENSMUSG00000025078.10|NHL repeat containing 2
mm39_v1_chr4_+_132857816_132857901	0.230541	Hoxa9_Hoxb9	ENSMUST00000084241.12|Wasf2|ENSMUSG00000028868.14|WASP family, member 2	ENSMUST00000138831.2|Wasf2|ENSMUSG00000028868.14|WASP family, member 2
mm39_v1_chr1_+_88139678_88139707	0.227168	Hoxa9_Hoxb9	ENSMUST00000073049.7|Ugt1a1|ENSMUSG00000089960.2|UDP glucuronosyltransferase 1 family, polypeptide A1
mm39_v1_chr1_-_125362321_125362383	0.223912	Hoxa9_Hoxb9	ENSMUST00000191544.7|Actr3|ENSMUSG00000026341.17|ARP3 actin-related protein 3
mm39_v1_chr14_-_31503869_31503892	0.223214	Hoxa9_Hoxb9	ENSMUST00000227089.2|Ankrd28|ENSMUSG00000014496.9|ankyrin repeat domain 28
mm39_v1_chr9_-_107648144_107648206	0.222918	Hoxa9_Hoxb9	ENSMUST00000183248.3|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182022.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000035199.13|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5	ENSMUST00000182659.8|Rbm5|ENSMUSG00000032580.13|RNA binding motif protein 5
mm39_v1_chr2_+_29509704_29509922	0.214246	Hoxa9_Hoxb9	ENSMUST00000095087.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000091146.12|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000102872.11|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1	ENSMUST00000147755.10|Rapgef1|ENSMUSG00000039844.21|Rap guanine nucleotide exchange factor (GEF) 1
mm39_v1_chr7_+_27977141_27977194	0.204761	Hoxa9_Hoxb9	ENSMUST00000094651.4|Eid2b|ENSMUSG00000070705.4|EP300 interacting inhibitor of differentiation 2B
mm39_v1_chr7_-_101519973_101519995	0.203551	Hoxa9_Hoxb9	ENSMUST00000126204.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000155311.2|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000106983.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000123630.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr17_+_36172235_36172378	0.202557	Hoxa9_Hoxb9	ENSMUST00000172931.2|Nrm|ENSMUSG00000059791.15|nurim (nuclear envelope membrane protein)
mm39_v1_chr17_-_71305003_71305049	0.195958	Hoxa9_Hoxb9	ENSMUST00000024846.13|Myl12a|ENSMUSG00000024048.16|myosin, light chain 12A, regulatory, non-sarcomeric	ENSMUST00000232766.2|Myl12a|ENSMUSG00000024048.16|myosin, light chain 12A, regulatory, non-sarcomeric
mm39_v1_chr19_-_56536443_56536480	0.195704	Hoxa9_Hoxb9	ENSMUST00000182059.2|Dclre1a|ENSMUSG00000025077.14|DNA cross-link repair 1A
mm39_v1_chrX_+_55493325_55493325	0.193951	Hoxa9_Hoxb9	ENSMUST00000079663.7|Gm2174|ENSMUSG00000058932.7|predicted gene 2174
mm39_v1_chr10_+_3822667_3822789	0.192395	Hoxa9_Hoxb9	ENSMUST00000136671.8|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	ENSMUST00000042438.13|Plekhg1|ENSMUSG00000040624.19|pleckstrin homology domain containing, family G (with RhoGef domain) member 1
mm39_v1_chr17_-_35081129_35081155	0.190721	Hoxa9_Hoxb9	ENSMUST00000154526.8|Cfb|ENSMUSG00000090231.11|complement factor B
mm39_v1_chr2_+_84818538_84818559	0.188279	Hoxa9_Hoxb9	ENSMUST00000028466.12|Prg3|ENSMUSG00000027072.14|proteoglycan 3
mm39_v1_chr15_+_3300249_3300488	0.185727	Hoxa9_Hoxb9	ENSMUST00000082424.12|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159158.9|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159216.10|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000160311.3|Selenop|ENSMUSG00000064373.14|selenoprotein P
mm39_v1_chr5_+_137786031_137786069	0.179463	Hoxa9_Hoxb9	ENSMUST00000035852.14|Zcwpw1|ENSMUSG00000037108.14|zinc finger, CW type with PWWP domain 1
mm39_v1_chr11_-_83421333_83421353	0.173263	Hoxa9_Hoxb9	ENSMUST00000035938.3|Ccl5|ENSMUSG00000035042.3|chemokine (C-C motif) ligand 5
mm39_v1_chr17_-_35081456_35081546	0.171184	Hoxa9_Hoxb9	ENSMUST00000025229.11|Cfb|ENSMUSG00000090231.11|complement factor B	ENSMUST00000176203.9|Cfb|ENSMUSG00000090231.11|complement factor B	ENSMUST00000128767.8|Cfb|ENSMUSG00000090231.11|complement factor B
mm39_v1_chr3_+_66893280_66893326	0.167877	Hoxa9_Hoxb9	ENSMUST00000161726.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000160504.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr3_+_66893031_66893073	0.166951	Hoxa9_Hoxb9	ENSMUST00000046542.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000162693.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr1_+_107439145_107439227	0.166854	Hoxa9_Hoxb9	ENSMUST00000009356.11|Serpinb2|ENSMUSG00000062345.11|serine (or cysteine) peptidase inhibitor, clade B, member 2	ENSMUST00000064916.9|Serpinb2|ENSMUSG00000062345.11|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm39_v1_chr1_-_97689263_97689391	0.164011	Hoxa9_Hoxb9	ENSMUST00000171129.8|Ppip5k2|ENSMUSG00000040648.16|diphosphoinositol pentakisphosphate kinase 2
mm39_v1_chr11_-_99134885_99134964	0.163168	Hoxa9_Hoxb9	ENSMUST00000103132.10|Krt222|ENSMUSG00000035849.15|keratin 222	ENSMUST00000038214.7|Krt222|ENSMUSG00000035849.15|keratin 222
mm39_v1_chr4_-_49597837_49597876	0.162329	Hoxa9_Hoxb9	ENSMUST00000042750.3|Pgap4|ENSMUSG00000039611.3|post-GPI attachment to proteins GalNAc transferase 4
mm39_v1_chr13_-_101829070_101829109	0.157645	Hoxa9_Hoxb9	ENSMUST00000187009.7|Pik3r1|ENSMUSG00000041417.16|phosphoinositide-3-kinase regulatory subunit 1
mm39_v1_chr7_-_101513300_101513363	0.150302	Hoxa9_Hoxb9	ENSMUST00000106981.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr19_-_7319211_7319228	0.149375	Hoxa9_Hoxb9	ENSMUST00000171393.8|Mark2|ENSMUSG00000024969.16|MAP/microtubule affinity regulating kinase 2
mm39_v1_chr3_+_108561247_108561280	0.14256	Hoxa9_Hoxb9	ENSMUST00000124384.8|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1	ENSMUST00000029483.15|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr7_-_101519914_101519935	0.1411	Hoxa9_Hoxb9	ENSMUST00000106985.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)	ENSMUST00000151706.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr17_+_14087827_14087878	0.140321	Hoxa9_Hoxb9	ENSMUST00000239324.2|Afdn|ENSMUSG00000068036.17|afadin, adherens junction formation factor
mm39_v1_chr3_+_82933383_82933522	0.133142	Hoxa9_Hoxb9	ENSMUST00000029630.15|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain	ENSMUST00000166581.4|Fga|ENSMUSG00000028001.17|fibrinogen alpha chain
mm39_v1_chr3_+_32490525_32490525	0.130833	Hoxa9_Hoxb9	ENSMUST00000108242.2|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
mm39_v1_chr5_-_73349191_73349276	0.129283	Hoxa9_Hoxb9	ENSMUST00000176910.3|Fryl|ENSMUSG00000070733.14|FRY like transcription coactivator
mm39_v1_chr14_+_20724378_20724497	0.118343	Hoxa9_Hoxb9	ENSMUST00000224492.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000223751.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000225108.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)	ENSMUST00000224754.2|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)
mm39_v1_chr19_-_33764859_33764859	0.118138	Hoxa9_Hoxb9	ENSMUST00000148137.9|Lipo1|ENSMUSG00000079342.12|lipase, member O1
mm39_v1_chr6_-_122317484_122317520	0.111275	Hoxa9_Hoxb9	ENSMUST00000112600.9|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr4_-_135780660_135780715	0.109827	Hoxa9_Hoxb9	ENSMUST00000102536.11|Rpl11|ENSMUSG00000059291.16|ribosomal protein L11
mm39_v1_chr17_+_33857030_33857086	0.105947	Hoxa9_Hoxb9	ENSMUST00000052079.8|Pram1|ENSMUSG00000032739.17|PML-RAR alpha-regulated adaptor molecule 1
mm39_v1_chr17_-_29226700_29226804	0.105217	Hoxa9_Hoxb9	ENSMUST00000233441.2|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr9_+_103917821_103917861	0.103922	Hoxa9_Hoxb9	ENSMUST00000216593.2|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)	ENSMUST00000147249.3|Gm28305|ENSMUSG00000101152.2|predicted gene 28305
mm39_v1_chr18_+_37898633_37898633	0.100433	Hoxa9_Hoxb9	ENSMUST00000044851.8|Pcdhga12|ENSMUSG00000102428.2|protocadherin gamma subfamily A, 12
mm39_v1_chr6_-_141719536_141719536	0.100053	Hoxa9_Hoxb9	ENSMUST00000148411.2|Gm5724|ENSMUSG00000084927.2|predicted gene 5724
mm39_v1_chr1_-_128030148_128030223	0.0981905	Hoxa9_Hoxb9	ENSMUST00000086614.12|Zranb3|ENSMUSG00000036086.17|zinc finger, RAN-binding domain containing 3
mm39_v1_chr6_+_108771840_108771885	0.0977324	Hoxa9_Hoxb9	ENSMUST00000204483.2|Arl8b|ENSMUSG00000030105.9|ADP-ribosylation factor-like 8B
mm39_v1_chr3_+_108561223_108561244	0.0971085	Hoxa9_Hoxb9	ENSMUST00000106609.8|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr7_-_101519872_101519890	0.0949117	Hoxa9_Hoxb9	ENSMUST00000106986.9|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chrX_+_158623460_158623477	0.0943303	Hoxa9_Hoxb9	ENSMUST00000112451.8|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1	ENSMUST00000112453.9|Sh3kbp1|ENSMUSG00000040990.18|SH3-domain kinase binding protein 1
mm39_v1_chr17_+_87270504_87270537	0.0931168	Hoxa9_Hoxb9	ENSMUST00000024956.15|Rhoq|ENSMUSG00000024143.16|ras homolog family member Q
mm39_v1_chr2_-_109111064_109111112	0.0927905	Hoxa9_Hoxb9	ENSMUST00000147770.2|Mettl15|ENSMUSG00000057234.10|methyltransferase like 15
mm39_v1_chr9_+_19620729_19620729	0.0917325	Hoxa9_Hoxb9	ENSMUST00000217450.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857	ENSMUST00000212013.4|Olfr857|ENSMUSG00000094678.6|olfactory receptor 857
mm39_v1_chr7_-_80055168_80055187	0.088949	Hoxa9_Hoxb9	ENSMUST00000107362.10|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)	ENSMUST00000135306.3|Furin|ENSMUSG00000030530.16|furin (paired basic amino acid cleaving enzyme)
mm39_v1_chr9_+_121196034_121196108	0.0885312	Hoxa9_Hoxb9	ENSMUST00000210636.2|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1	ENSMUST00000045903.8|Trak1|ENSMUSG00000032536.13|trafficking protein, kinesin binding 1
mm39_v1_chr1_-_156546600_156546656	0.0862813	Hoxa9_Hoxb9	ENSMUST00000122424.8|Fam20b|ENSMUSG00000033557.18|FAM20B, glycosaminoglycan xylosylkinase	ENSMUST00000086153.8|Fam20b|ENSMUSG00000033557.18|FAM20B, glycosaminoglycan xylosylkinase
mm39_v1_chr11_+_66969119_66969133	0.0862425	Hoxa9_Hoxb9	ENSMUST00000108689.8|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic	ENSMUST00000007301.14|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic	ENSMUST00000165221.2|Myh3|ENSMUSG00000020908.15|myosin, heavy polypeptide 3, skeletal muscle, embryonic
mm39_v1_chr4_+_44012638_44012694	0.0823834	Hoxa9_Hoxb9	ENSMUST00000107847.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000170241.8|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107849.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107851.10|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)	ENSMUST00000107845.4|Clta|ENSMUSG00000028478.19|clathrin, light polypeptide (Lca)
mm39_v1_chr3_+_108561294_108561306	0.0822262	Hoxa9_Hoxb9	ENSMUST00000106613.2|Clcc1|ENSMUSG00000027884.17|chloride channel CLIC-like 1
mm39_v1_chr14_+_20724366_20724376	0.0819509	Hoxa9_Hoxb9	ENSMUST00000048657.10|Sec24c|ENSMUSG00000039367.12|Sec24 related gene family, member C (S. cerevisiae)
mm39_v1_chr9_+_7571397_7571490	0.0779633	Hoxa9_Hoxb9	ENSMUST00000120900.8|Mmp27|ENSMUSG00000070323.12|matrix metallopeptidase 27	ENSMUST00000151853.8|Mmp27|ENSMUSG00000070323.12|matrix metallopeptidase 27	ENSMUST00000152878.3|Mmp27|ENSMUSG00000070323.12|matrix metallopeptidase 27
mm39_v1_chr7_-_135130374_135130389	0.0769836	Hoxa9_Hoxb9	ENSMUST00000053716.8|Clrn3|ENSMUSG00000050866.8|clarin 3
mm39_v1_chr6_-_56681657_56681698	0.0763431	Hoxa9_Hoxb9	ENSMUST00000176595.3|Lsm5|ENSMUSG00000091625.9|LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated	ENSMUST00000170382.5|Lsm5|ENSMUSG00000091625.9|LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated	ENSMUST00000203958.2|Lsm5|ENSMUSG00000091625.9|LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
mm39_v1_chr19_-_57185988_57186063	0.0757683	Hoxa9_Hoxb9	ENSMUST00000099294.9|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr3_-_113367891_113367921	0.0735509	Hoxa9_Hoxb9	ENSMUST00000142505.9|Amy1|ENSMUSG00000074264.13|amylase 1, salivary
mm39_v1_chr16_-_19241884_19241884	0.0734505	Hoxa9_Hoxb9	ENSMUST00000206110.4|Olfr165|ENSMUSG00000050158.8|olfactory receptor 165
mm39_v1_chr7_+_142086880_142086911	0.0713168	Hoxa9_Hoxb9	ENSMUST00000210803.2|Mrpl23|ENSMUSG00000037772.14|mitochondrial ribosomal protein L23
mm39_v1_chr13_-_59890564_59890564	0.0707915	Hoxa9_Hoxb9	ENSMUST00000055343.3|1700014D04Rik|ENSMUSG00000051054.5|RIKEN cDNA 1700014D04 gene
mm39_v1_chr5_+_31609772_31609795	0.0695532	Hoxa9_Hoxb9	ENSMUST00000202061.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512	ENSMUST00000076264.8|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512	ENSMUST00000201450.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512
mm39_v1_chr7_+_142086749_142086787	0.0680352	Hoxa9_Hoxb9	ENSMUST00000038675.7|Mrpl23|ENSMUSG00000037772.14|mitochondrial ribosomal protein L23
mm39_v1_chr4_-_49549489_49549546	0.0665015	Hoxa9_Hoxb9	ENSMUST00000029987.10|Aldob|ENSMUSG00000028307.10|aldolase B, fructose-bisphosphate
mm39_v1_chr9_-_101076198_101076278	0.0642644	Hoxa9_Hoxb9	ENSMUST00000066773.9|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr8_-_34333573_34333699	0.0632241	Hoxa9_Hoxb9	ENSMUST00000183062.2|Rbpms|ENSMUSG00000031586.18|RNA binding protein gene with multiple splicing
mm39_v1_chr4_+_145311759_145311791	0.06035	Hoxa9_Hoxb9	ENSMUST00000119718.8|Zfp268|ENSMUSG00000078502.11|zinc finger protein 268
mm39_v1_chr6_+_67838100_67838143	0.0600782	Hoxa9_Hoxb9	ENSMUST00000200586.2|Igkv17-127|ENSMUSG00000076508.4|immunoglobulin kappa variable 17-127	ENSMUST00000103309.3|Igkv17-127|ENSMUSG00000076508.4|immunoglobulin kappa variable 17-127
mm39_v1_chr8_+_10027707_10027725	0.0581569	Hoxa9_Hoxb9	ENSMUST00000139793.8|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13	ENSMUST00000048216.6|Abhd13|ENSMUSG00000040396.13|abhydrolase domain containing 13
mm39_v1_chr13_-_111686445_111686481	0.0573127	Hoxa9_Hoxb9	ENSMUST00000132880.3|Gm15290|ENSMUSG00000085634.3|predicted gene 15290	ENSMUST00000231096.2|Gm49496|ENSMUSG00000116016.2|predicted gene, 49496
mm39_v1_chrX_+_158086253_158086277	0.0572646	Hoxa9_Hoxb9	ENSMUST00000112491.2|Rps6ka3|ENSMUSG00000031309.16|ribosomal protein S6 kinase polypeptide 3
mm39_v1_chr17_+_37274714_37274729	0.0559381	Hoxa9_Hoxb9	ENSMUST00000209623.2|Polr1has|ENSMUSG00000036214.15|RNA polymerase I subunit H, antisense
mm39_v1_chr2_-_45002902_45003021	0.0530971	Hoxa9_Hoxb9	ENSMUST00000076836.13|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000176732.8|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2	ENSMUST00000200844.4|Zeb2|ENSMUSG00000026872.19|zinc finger E-box binding homeobox 2
mm39_v1_chr5_+_31609802_31609860	0.0517977	Hoxa9_Hoxb9	ENSMUST00000202244.4|Zfp512|ENSMUSG00000062761.8|zinc finger protein 512
mm39_v1_chr19_-_57185928_57185969	0.0491276	Hoxa9_Hoxb9	ENSMUST00000111544.8|Ablim1|ENSMUSG00000025085.17|actin-binding LIM protein 1
mm39_v1_chr2_+_85804239_85804239	0.0491015	Hoxa9_Hoxb9	ENSMUST00000217244.2|Olfr1029|ENSMUSG00000059873.5|olfactory receptor 1029
mm39_v1_chr11_+_67061837_67061866	0.0483564	Hoxa9_Hoxb9	ENSMUST00000170159.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr7_+_44711853_44711950	0.0482497	Hoxa9_Hoxb9	ENSMUST00000107829.9|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000003513.11|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000211465.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000210088.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein	ENSMUST00000210520.2|Nosip|ENSMUSG00000003421.14|nitric oxide synthase interacting protein
mm39_v1_chr10_+_17672004_17672088	0.0480955	Hoxa9_Hoxb9	ENSMUST00000037964.7|Txlnb|ENSMUSG00000039891.7|taxilin beta
mm39_v1_chr11_+_67061908_67062046	0.047733	Hoxa9_Hoxb9	ENSMUST00000018641.8|Myh2|ENSMUSG00000033196.18|myosin, heavy polypeptide 2, skeletal muscle, adult
mm39_v1_chr7_+_110367375_110367413	0.0476481	Hoxa9_Hoxb9	ENSMUST00000170374.8|Ampd3|ENSMUSG00000005686.18|adenosine monophosphate deaminase 3
mm39_v1_chr6_+_134958681_134958681	0.0467505	Hoxa9_Hoxb9	ENSMUST00000167323.3|Apold1|ENSMUSG00000090698.3|apolipoprotein L domain containing 1
mm39_v1_chr4_+_115594918_115594949	0.0457662	Hoxa9_Hoxb9	ENSMUST00000106525.9|Efcab14|ENSMUSG00000034210.15|EF-hand calcium binding domain 14
mm39_v1_chr15_-_78947038_78947142	0.0449447	Hoxa9_Hoxb9	ENSMUST00000151889.8|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54	ENSMUST00000040676.11|Ankrd54|ENSMUSG00000033055.13|ankyrin repeat domain 54
mm39_v1_chr2_+_85809620_85809620	0.0446155	Hoxa9_Hoxb9	ENSMUST00000056849.3|Olfr1030|ENSMUSG00000044923.5|olfactory receptor 1030
mm39_v1_chr5_+_63969706_63969891	0.0445312	Hoxa9_Hoxb9	ENSMUST00000081747.8|0610040J01Rik|ENSMUSG00000060512.8|RIKEN cDNA 0610040J01 gene	ENSMUST00000196575.5|0610040J01Rik|ENSMUSG00000060512.8|RIKEN cDNA 0610040J01 gene
mm39_v1_chrX_+_110920704_110920704	0.0444894	Hoxa9_Hoxb9	ENSMUST00000131304.2|Tex16|ENSMUSG00000034555.15|testis expressed gene 16
mm39_v1_chr7_-_19967753_19967753	0.0443722	Hoxa9_Hoxb9	ENSMUST00000168580.2|Vmn1r242|ENSMUSG00000094757.2|vomeronasal 1 receptor 242
mm39_v1_chr4_+_115594951_115594993	0.0434643	Hoxa9_Hoxb9	ENSMUST00000106522.9|Efcab14|ENSMUSG00000034210.15|EF-hand calcium binding domain 14
mm39_v1_chr2_-_88768449_88768455	0.0424598	Hoxa9_Hoxb9	ENSMUST00000215205.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211	ENSMUST00000213412.2|Olfr1211|ENSMUSG00000075112.3|olfactory receptor 1211
mm39_v1_chr6_-_70217956_70217956	0.0423293	Hoxa9_Hoxb9	ENSMUST00000196275.2|Gm43218|ENSMUSG00000105432.2|predicted gene 43218
mm39_v1_chr5_+_143864993_143864993	0.0415975	Hoxa9_Hoxb9	ENSMUST00000172367.3|Gm42421|ENSMUSG00000104633.2|predicted gene, 42421
mm39_v1_chr16_+_18247666_18247684	0.0390602	Hoxa9_Hoxb9	ENSMUST00000144233.3|Txnrd2|ENSMUSG00000075704.18|thioredoxin reductase 2
mm39_v1_chr10_+_25308466_25308518	0.0381092	Hoxa9_Hoxb9	ENSMUST00000219224.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000219166.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr6_+_51500881_51500915	0.0379246	Hoxa9_Hoxb9	ENSMUST00000049152.15|Snx10|ENSMUSG00000038301.16|sorting nexin 10
mm39_v1_chr4_-_58787716_58787716	0.0376346	Hoxa9_Hoxb9	ENSMUST00000216719.2|Olfr267|ENSMUSG00000043385.5|olfactory receptor 267
mm39_v1_chr16_+_26281885_26282006	0.0372473	Hoxa9_Hoxb9	ENSMUST00000161053.8|Cldn16|ENSMUSG00000038148.14|claudin 16	ENSMUST00000115302.2|Cldn16|ENSMUSG00000038148.14|claudin 16
mm39_v1_chr1_-_171854818_171854880	0.0371673	Hoxa9_Hoxb9	ENSMUST00000138714.2|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000027837.13|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2	ENSMUST00000111264.8|Vangl2|ENSMUSG00000026556.16|VANGL planar cell polarity 2
mm39_v1_chr9_-_60594742_60594955	0.0363222	Hoxa9_Hoxb9	ENSMUST00000114032.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000166168.8|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49	ENSMUST00000132366.2|Lrrc49|ENSMUSG00000047766.16|leucine rich repeat containing 49
mm39_v1_chr12_+_71184614_71184614	0.0345072	Hoxa9_Hoxb9	ENSMUST00000045907.16|2700049A03Rik|ENSMUSG00000034601.18|RIKEN cDNA 2700049A03 gene
mm39_v1_chr4_+_146586445_146586484	0.0338414	Hoxa9_Hoxb9	ENSMUST00000105735.9|Zfp981|ENSMUSG00000056300.15|zinc finger protein 981
mm39_v1_chr6_-_24168082_24168096	0.0305635	Hoxa9_Hoxb9	ENSMUST00000031713.9|Slc13a1|ENSMUSG00000029700.12|solute carrier family 13 (sodium/sulfate symporters), member 1
mm39_v1_chr7_+_55699883_55700001	0.0301907	Hoxa9_Hoxb9	ENSMUST00000205653.2|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2	ENSMUST00000076226.13|Herc2|ENSMUSG00000030451.17|HECT and RLD domain containing E3 ubiquitin protein ligase 2
mm39_v1_chr6_+_70675416_70675434	0.0300253	Hoxa9_Hoxb9	ENSMUST00000103403.3|Igkv3-2|ENSMUSG00000095351.3|immunoglobulin kappa variable 3-2
mm39_v1_chr9_+_38259707_38259707	0.0296814	Hoxa9_Hoxb9	ENSMUST00000217063.2|Olfr898|ENSMUSG00000094588.3|olfactory receptor 898
mm39_v1_chr8_+_121215155_121215229	0.0296278	Hoxa9_Hoxb9	ENSMUST00000034279.16|Gse1|ENSMUSG00000031822.21|genetic suppressor element 1, coiled-coil protein
mm39_v1_chr19_+_13628455_13628455	0.028233	Hoxa9_Hoxb9	ENSMUST00000213900.2|Olfr1490|ENSMUSG00000061387.4|olfactory receptor 1490
mm39_v1_chr1_+_59296065_59296066	0.0275083	Hoxa9_Hoxb9	ENSMUST00000160662.8|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15	ENSMUST00000114248.3|Cdk15|ENSMUSG00000026023.17|cyclin-dependent kinase 15
mm39_v1_chr11_+_115294560_115294603	0.026715	Hoxa9_Hoxb9	ENSMUST00000153983.8|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58	ENSMUST00000106539.10|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58	ENSMUST00000103036.5|Mrpl58|ENSMUSG00000018858.16|mitochondrial ribosomal protein L58
mm39_v1_chr13_-_48746836_48746881	0.0265531	Hoxa9_Hoxb9	ENSMUST00000238995.2|Ptpdc1|ENSMUSG00000038042.12|protein tyrosine phosphatase domain containing 1
mm39_v1_chr19_+_13208692_13208692	0.0264709	Hoxa9_Hoxb9	ENSMUST00000207246.4|Olfr1463|ENSMUSG00000096365.5|olfactory receptor 1463
mm39_v1_chr18_-_31450095_31450186	0.0261661	Hoxa9_Hoxb9	ENSMUST00000139924.2|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2	ENSMUST00000153060.8|Rit2|ENSMUSG00000057455.13|Ras-like without CAAX 2
mm39_v1_chr2_+_89821565_89821582	0.0260704	Hoxa9_Hoxb9	ENSMUST00000111509.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261	ENSMUST00000213909.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr9_+_111014254_111014265	0.0241004	Hoxa9_Hoxb9	ENSMUST00000198986.2|Lrrfip2|ENSMUSG00000032497.20|leucine rich repeat (in FLII) interacting protein 2
mm39_v1_chr16_-_19132814_19132814	0.0227978	Hoxa9_Hoxb9	ENSMUST00000216157.2|Olfr164|ENSMUSG00000050742.6|olfactory receptor 164
mm39_v1_chrY_-_9132561_9132561	0.022478	Hoxa9_Hoxb9	ENSMUST00000171947.3|Gm21292|ENSMUSG00000091077.4|predicted gene, 21292
mm39_v1_chr1_+_66403774_66403822	0.0223766	Hoxa9_Hoxb9	ENSMUST00000077355.12|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2	ENSMUST00000114012.8|Map2|ENSMUSG00000015222.19|microtubule-associated protein 2
mm39_v1_chr2_-_32977182_32977265	0.0201119	Hoxa9_Hoxb9	ENSMUST00000102810.10|Garnl3|ENSMUSG00000038860.16|GTPase activating RANGAP domain-like 3
mm39_v1_chrY_+_2904133_2904133	0.01913	Hoxa9_Hoxb9	ENSMUST00000166474.3|Gm10352|ENSMUSG00000091987.9|predicted gene 10352
mm39_v1_chr11_-_99996452_99996471	0.0185669	Hoxa9_Hoxb9	ENSMUST00000107416.3|Krt36|ENSMUSG00000020916.9|keratin 36
mm39_v1_chr11_-_99941369_99941382	0.0179477	Hoxa9_Hoxb9	ENSMUST00000007318.2|Krt31|ENSMUSG00000048981.2|keratin 31
mm39_v1_chr6_-_70364222_70364236	0.0172494	Hoxa9_Hoxb9	ENSMUST00000103392.3|Igkv8-16|ENSMUSG00000076591.4|immunoglobulin kappa variable 8-16	ENSMUST00000195945.2|Igkv8-16|ENSMUSG00000076591.4|immunoglobulin kappa variable 8-16
mm39_v1_chrX_+_110801086_110801086	0.016246	Hoxa9_Hoxb9	ENSMUST00000207962.2|Gm45194|ENSMUSG00000109156.2|predicted gene 45194
mm39_v1_chr9_-_101128976_101129003	0.0162022	Hoxa9_Hoxb9	ENSMUST00000075941.12|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr2_-_181240921_181241028	0.0161287	Hoxa9_Hoxb9	ENSMUST00000060173.9|Samd10|ENSMUSG00000038605.12|sterile alpha motif domain containing 10
mm39_v1_chr10_-_130265572_130265572	0.0150245	Hoxa9_Hoxb9	ENSMUST00000171811.4|Vmn2r85|ENSMUSG00000092048.4|vomeronasal 2, receptor 85
mm39_v1_chr16_+_88574717_88574784	0.013968	Hoxa9_Hoxb9	ENSMUST00000009191.4|Gm5965|ENSMUSG00000009047.5|predicted gene 5965	ENSMUST00000238221.2|Gm5965|ENSMUSG00000009047.5|predicted gene 5965
mm39_v1_chr6_+_146944253_146944298	0.0137255	Hoxa9_Hoxb9	ENSMUST00000036111.10|Mrps35|ENSMUSG00000040112.10|mitochondrial ribosomal protein S35
mm39_v1_chr3_+_108498595_108498727	0.013533	Hoxa9_Hoxb9	ENSMUST00000051145.15|Wdr47|ENSMUSG00000040389.16|WD repeat domain 47
mm39_v1_chr10_+_129153986_129153986	0.0133444	Hoxa9_Hoxb9	ENSMUST00000215503.2|Olfr780|ENSMUSG00000049573.4|olfactory receptor 780
mm39_v1_chr10_+_129306867_129306867	0.0131977	Hoxa9_Hoxb9	ENSMUST00000213222.2|Olfr788|ENSMUSG00000049217.5|olfactory receptor 788
mm39_v1_chr17_-_29226965_29226976	0.0112355	Hoxa9_Hoxb9	ENSMUST00000009138.13|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38	ENSMUST00000119274.3|Stk38|ENSMUSG00000024006.18|serine/threonine kinase 38
mm39_v1_chr3_-_95014218_95014241	0.0106635	Hoxa9_Hoxb9	ENSMUST00000107233.9|Pip5k1a|ENSMUSG00000028126.17|phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha
mm39_v1_chr16_-_22630327_22630327	0.0100504	Hoxa9_Hoxb9	ENSMUST00000040592.6|Crygs|ENSMUSG00000033501.6|crystallin, gamma S
mm39_v1_chr7_-_101519791_101519841	0.00792265	Hoxa9_Hoxb9	ENSMUST00000124026.8|Folr1|ENSMUSG00000001827.13|folate receptor 1 (adult)
mm39_v1_chr3_+_84859453_84859493	0.00740313	Hoxa9_Hoxb9	ENSMUST00000029727.8|Fbxw7|ENSMUSG00000028086.16|F-box and WD-40 domain protein 7
mm39_v1_chr6_-_122317457_122317471	0.00734447	Hoxa9_Hoxb9	ENSMUST00000160843.8|Phc1|ENSMUSG00000040669.15|polyhomeotic 1
mm39_v1_chr6_+_70565173_70565173	0.00627605	Hoxa9_Hoxb9	ENSMUST00000103398.2|Igkv3-9|ENSMUSG00000095338.2|immunoglobulin kappa variable 3-9
mm39_v1_chr2_+_89821818_89821818	0.00575471	Hoxa9_Hoxb9	ENSMUST00000216953.3|Olfr1261|ENSMUSG00000061295.6|olfactory receptor 1261
mm39_v1_chr15_+_81821112_81821183	0.00514753	Hoxa9_Hoxb9	ENSMUST00000135663.2|Csdc2|ENSMUSG00000042109.9|cold shock domain containing C2, RNA binding
mm39_v1_chr6_+_70648743_70648772	0.0048469	Hoxa9_Hoxb9	ENSMUST00000103401.3|Igkv3-4|ENSMUSG00000096715.3|immunoglobulin kappa variable 3-4
mm39_v1_chr2_+_36674288_36674368	0.00464034	Hoxa9_Hoxb9	ENSMUST00000213498.2|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348	ENSMUST00000214909.3|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348	ENSMUST00000215199.2|Olfr348|ENSMUSG00000049315.5|olfactory receptor 348
mm39_v1_chr3_+_137770813_137770839	0.00433157	Hoxa9_Hoxb9	ENSMUST00000163080.3|1110002E22Rik|ENSMUSG00000090066.3|RIKEN cDNA 1110002E22 gene
mm39_v1_chr13_+_83723743_83723796	0.00393924	Hoxa9_Hoxb9	ENSMUST00000198217.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000199210.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chr19_-_13075176_13075255	0.00135518	Hoxa9_Hoxb9	ENSMUST00000208913.2|Olfr1457|ENSMUSG00000061637.6|olfactory receptor 1457	ENSMUST00000215229.2|Olfr1457|ENSMUSG00000061637.6|olfactory receptor 1457
mm39_v1_chr7_-_20646272_20646272	2.86877e-05	Hoxa9_Hoxb9	ENSMUST00000172322.2|Vmn1r118|ENSMUSG00000094589.2|vomeronasal 1 receptor 118
mm39_v1_chr7_-_20437141_20437141	2.86803e-05	Hoxa9_Hoxb9	ENSMUST00000179511.2|Vmn1r111|ENSMUSG00000095768.2|vomeronasal 1 receptor 111
mm39_v1_chr7_-_21280015_21280015	2.86803e-05	Hoxa9_Hoxb9	ENSMUST00000179390.2|Vmn1r131|ENSMUSG00000093941.2|vomeronasal 1 receptor 131
mm39_v1_chr7_-_21728322_21728322	2.86803e-05	Hoxa9_Hoxb9	ENSMUST00000179206.2|Vmn1r138|ENSMUSG00000095163.2|vomeronasal 1 receptor 138
mm39_v1_chr7_-_22391742_22391742	2.86803e-05	Hoxa9_Hoxb9	ENSMUST00000178871.2|Vmn1r257|ENSMUSG00000095081.2|vomeronasal 1 receptor 257
mm39_v1_chr7_-_22951107_22951107	2.86803e-05	Hoxa9_Hoxb9	ENSMUST00000164045.2|Vmn1r166|ENSMUSG00000096073.2|vomeronasal 1 receptor 166
mm39_v1_chr7_-_21928909_21928909	2.81035e-05	Hoxa9_Hoxb9	ENSMUST00000167253.2|Vmn1r252|ENSMUSG00000094149.2|vomeronasal 1 receptor 252
