mm39_v1_chr17_-_12894716_12894731	16.3352	Foxa3	ENSMUST00000024596.10|Slc22a1|ENSMUSG00000023829.10|solute carrier family 22 (organic cation transporter), member 1
mm39_v1_chr10_+_127734384_127734401	11.3185	Foxa3	ENSMUST00000047134.8|Sdr9c7|ENSMUSG00000040127.14|4short chain dehydrogenase/reductase family 9C, member 7
mm39_v1_chr3_+_138121245_138121271	10.5359	Foxa3	ENSMUST00000161312.8|Adh4|ENSMUSG00000037797.15|alcohol dehydrogenase 4 (class II), pi polypeptide	ENSMUST00000013458.9|Adh4|ENSMUSG00000037797.15|alcohol dehydrogenase 4 (class II), pi polypeptide
mm39_v1_chr19_+_20579322_20579343	9.81508	Foxa3	ENSMUST00000087638.4|Aldh1a1|ENSMUSG00000053279.9|aldehyde dehydrogenase family 1, subfamily A1
mm39_v1_chr12_-_84497718_84497792	8.9292	Foxa3	ENSMUST00000085192.7|Aldh6a1|ENSMUSG00000021238.12|aldehyde dehydrogenase family 6, subfamily A1	ENSMUST00000220491.2|Aldh6a1|ENSMUSG00000021238.12|aldehyde dehydrogenase family 6, subfamily A1
mm39_v1_chr17_-_31363245_31363262	8.80673	Foxa3	ENSMUST00000024826.8|Tff2|ENSMUSG00000024028.8|trefoil factor 2 (spasmolytic protein 1)
mm39_v1_chr19_+_30210320_30210342	8.45721	Foxa3	ENSMUST00000025797.7|Mbl2|ENSMUSG00000024863.7|mannose-binding lectin (protein C) 2
mm39_v1_chr15_+_4756684_4756713	7.76347	Foxa3	ENSMUST00000161997.8|C6|ENSMUSG00000022181.17|complement component 6	ENSMUST00000022788.15|C6|ENSMUSG00000022181.17|complement component 6
mm39_v1_chr15_+_4756657_4756682	7.56388	Foxa3	ENSMUST00000162585.8|C6|ENSMUSG00000022181.17|complement component 6
mm39_v1_chr19_-_20704896_20704932	7.2193	Foxa3	ENSMUST00000025656.4|Aldh1a7|ENSMUSG00000024747.4|aldehyde dehydrogenase family 1, subfamily A7
mm39_v1_chr3_-_20329823_20329897	7.11076	Foxa3	ENSMUST00000011607.6|Cpb1|ENSMUSG00000011463.6|carboxypeptidase B1 (tissue)
mm39_v1_chr15_-_96929086_96929102	7.02008	Foxa3	ENSMUST00000230086.2|Slc38a4|ENSMUSG00000022464.15|solute carrier family 38, member 4
mm39_v1_chr9_+_46139878_46140019	6.72894	Foxa3	ENSMUST00000034588.9|Apoa1|ENSMUSG00000032083.9|apolipoprotein A-I	ENSMUST00000132155.2|Apoa1|ENSMUSG00000032083.9|apolipoprotein A-I
mm39_v1_chr7_+_130633776_130633806	6.60442	Foxa3	ENSMUST00000084509.7|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1	ENSMUST00000213064.3|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1	ENSMUST00000208311.4|Dmbt1|ENSMUSG00000047517.14|deleted in malignant brain tumors 1
mm39_v1_chr2_+_58645189_58645224	6.53968	Foxa3	ENSMUST00000102755.4|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000230627.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2	ENSMUST00000229923.2|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr17_+_25097199_25097239	6.13615	Foxa3	ENSMUST00000050714.8|Igfals|ENSMUSG00000046070.10|insulin-like growth factor binding protein, acid labile subunit
mm39_v1_chr3_-_113166153_113166153	6.06434	Foxa3	ENSMUST00000098673.5|Amy2a5|ENSMUSG00000074268.5|amylase 2a5
mm39_v1_chr3_+_137983250_137983256	5.95073	Foxa3	ENSMUST00000004232.10|Adh1|ENSMUSG00000074207.11|alcohol dehydrogenase 1 (class I)
mm39_v1_chr9_-_71070506_71070572	5.93344	Foxa3	ENSMUST00000074465.9|Aqp9|ENSMUSG00000032204.14|aquaporin 9
mm39_v1_chr2_-_134396268_134396289	5.89459	Foxa3	ENSMUST00000028704.3|Hao1|ENSMUSG00000027261.3|hydroxyacid oxidase 1, liver
mm39_v1_chr12_-_81014849_81014860	5.86888	Foxa3	ENSMUST00000095572.5|Slc10a1|ENSMUSG00000021135.9|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm39_v1_chr12_-_81014755_81014806	5.69847	Foxa3	ENSMUST00000218342.2|Slc10a1|ENSMUSG00000021135.9|solute carrier family 10 (sodium/bile acid cotransporter family), member 1
mm39_v1_chr12_-_103739847_103739869	5.49396	Foxa3	ENSMUST00000078869.6|Serpina1d|ENSMUSG00000071177.5|serine (or cysteine) peptidase inhibitor, clade A, member 1D
mm39_v1_chr2_+_58644922_58644954	5.27566	Foxa3	ENSMUST00000059102.13|Upp2|ENSMUSG00000026839.18|uridine phosphorylase 2
mm39_v1_chr1_+_88093726_88093759	5.20254	Foxa3	ENSMUST00000097659.5|Ugt1a5|ENSMUSG00000089943.2|UDP glucuronosyltransferase 1 family, polypeptide A5
mm39_v1_chr4_-_6275629_6275634	5.12723	Foxa3	ENSMUST00000029905.2|Cyp7a1|ENSMUSG00000028240.3|cytochrome P450, family 7, subfamily a, polypeptide 1
mm39_v1_chr15_+_3300249_3300488	4.88706	Foxa3	ENSMUST00000082424.12|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159158.9|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000159216.10|Selenop|ENSMUSG00000064373.14|selenoprotein P	ENSMUST00000160311.3|Selenop|ENSMUSG00000064373.14|selenoprotein P
mm39_v1_chr4_+_104623505_104623592	4.75665	Foxa3	ENSMUST00000031663.10|C8b|ENSMUSG00000029656.14|complement component 8, beta polypeptide	ENSMUST00000065072.7|C8b|ENSMUSG00000029656.14|complement component 8, beta polypeptide
mm39_v1_chr12_+_8027767_8027792	4.68762	Foxa3	ENSMUST00000037520.14|Apob|ENSMUSG00000020609.15|apolipoprotein B
mm39_v1_chr12_+_8062331_8062359	4.63085	Foxa3	ENSMUST00000171239.2|Apob|ENSMUSG00000020609.15|apolipoprotein B
mm39_v1_chr12_+_8027640_8027660	4.5187	Foxa3	ENSMUST00000171271.8|Apob|ENSMUSG00000020609.15|apolipoprotein B	ENSMUST00000037811.13|Apob|ENSMUSG00000020609.15|apolipoprotein B
mm39_v1_chr2_+_67948057_67948057	4.39327	Foxa3	ENSMUST00000112346.3|B3galt1|ENSMUSG00000034780.7|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
mm39_v1_chr14_-_30665232_30665251	4.20827	Foxa3	ENSMUST00000006704.17|Itih1|ENSMUSG00000006529.17|inter-alpha trypsin inhibitor, heavy chain 1	ENSMUST00000163118.2|Itih1|ENSMUSG00000006529.17|inter-alpha trypsin inhibitor, heavy chain 1
mm39_v1_chr18_-_39051695_39051824	4.1628	Foxa3	ENSMUST00000040647.11|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr7_-_105249308_105249344	4.09885	Foxa3	ENSMUST00000210531.2|Hpx|ENSMUSG00000030895.10|hemopexin	ENSMUST00000033185.10|Hpx|ENSMUSG00000030895.10|hemopexin
mm39_v1_chr6_-_23132977_23132991	3.86362	Foxa3	ENSMUST00000031707.14|Aass|ENSMUSG00000029695.14|aminoadipate-semialdehyde synthase
mm39_v1_chr17_-_79292856_79292898	3.8087	Foxa3	ENSMUST00000118991.2|Prkd3|ENSMUSG00000024070.16|protein kinase D3
mm39_v1_chr4_-_57916283_57916306	3.6008	Foxa3	ENSMUST00000063816.6|D630039A03Rik|ENSMUSG00000052117.6|RIKEN cDNA D630039A03 gene
mm39_v1_chr19_-_58442866_58442905	3.54889	Foxa3	ENSMUST00000169850.8|Gfra1|ENSMUSG00000025089.16|glial cell line derived neurotrophic factor family receptor alpha 1
mm39_v1_chr17_+_12597490_12597508	3.53297	Foxa3	ENSMUST00000014578.7|Plg|ENSMUSG00000059481.6|plasminogen
mm39_v1_chr18_-_32271224_32271252	3.49092	Foxa3	ENSMUST00000234657.2|Proc|ENSMUSG00000024386.10|protein C	ENSMUST00000234386.2|Proc|ENSMUSG00000024386.10|protein C	ENSMUST00000234651.2|Proc|ENSMUSG00000024386.10|protein C
mm39_v1_chr11_-_69696428_69696498	3.49083	Foxa3	ENSMUST00000051025.5|Tmem102|ENSMUSG00000089876.4|transmembrane protein 102
mm39_v1_chr15_-_54783357_54783438	3.44161	Foxa3	ENSMUST00000167541.3|Enpp2|ENSMUSG00000022425.17|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENSMUST00000171545.9|Enpp2|ENSMUSG00000022425.17|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENSMUST00000041591.16|Enpp2|ENSMUSG00000022425.17|ectonucleotide pyrophosphatase/phosphodiesterase 2	ENSMUST00000173516.8|Enpp2|ENSMUSG00000022425.17|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm39_v1_chr3_+_20011405_20011448	3.43781	Foxa3	ENSMUST00000108325.9|Cp|ENSMUSG00000003617.17|ceruloplasmin
mm39_v1_chrX_+_138464065_138464088	3.34403	Foxa3	ENSMUST00000113027.8|Rnf128|ENSMUSG00000031438.12|ring finger protein 128
mm39_v1_chr6_+_34575435_34575521	3.33162	Foxa3	ENSMUST00000079391.10|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000142512.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115027.8|Cald1|ENSMUSG00000029761.17|caldesmon 1	ENSMUST00000115026.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr8_+_46944000_46944032	3.32899	Foxa3	ENSMUST00000110372.9|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1	ENSMUST00000130563.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr1_+_130793406_130793505	3.22237	Foxa3	ENSMUST00000038829.7|Fcmr|ENSMUSG00000042474.7|Fc fragment of IgM receptor
mm39_v1_chr10_-_95678786_95678808	3.20847	Foxa3	ENSMUST00000211096.2|Gm33543|ENSMUSG00000110353.2|predicted gene, 33543
mm39_v1_chr3_-_146302343_146302367	3.17006	Foxa3	ENSMUST00000029836.9|Dnase2b|ENSMUSG00000028185.13|deoxyribonuclease II beta
mm39_v1_chr4_-_63072367_63072410	3.15782	Foxa3	ENSMUST00000030041.5|Ambp|ENSMUSG00000028356.5|alpha 1 microglobulin/bikunin precursor
mm39_v1_chr11_+_78389913_78389958	3.12466	Foxa3	ENSMUST00000017488.5|Vtn|ENSMUSG00000017344.5|vitronectin
mm39_v1_chr3_+_20011251_20011296	3.07465	Foxa3	ENSMUST00000108328.8|Cp|ENSMUSG00000003617.17|ceruloplasmin
mm39_v1_chr5_+_90708962_90709076	3.05971	Foxa3	ENSMUST00000094615.8|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1	ENSMUST00000200765.2|Albfm1|ENSMUSG00000070690.8|albumin superfamily member 1
mm39_v1_chr9_-_103099262_103099357	2.99068	Foxa3	ENSMUST00000170904.2|Trf|ENSMUSG00000032554.16|transferrin
mm39_v1_chr8_+_46984016_46984101	2.95863	Foxa3	ENSMUST00000152423.2|Acsl1|ENSMUSG00000018796.14|acyl-CoA synthetase long-chain family member 1
mm39_v1_chr4_+_150938376_150938525	2.88534	Foxa3	ENSMUST00000073600.9|Errfi1|ENSMUSG00000028967.11|ERBB receptor feedback inhibitor 1
mm39_v1_chr5_-_87054796_87054815	2.83025	Foxa3	ENSMUST00000031181.16|Ugt2b34|ENSMUSG00000029260.16|UDP glucuronosyltransferase 2 family, polypeptide B34	ENSMUST00000113333.2|Ugt2b34|ENSMUSG00000029260.16|UDP glucuronosyltransferase 2 family, polypeptide B34
mm39_v1_chr3_+_20011201_20011237	2.82758	Foxa3	ENSMUST00000091309.12|Cp|ENSMUSG00000003617.17|ceruloplasmin	ENSMUST00000108329.8|Cp|ENSMUSG00000003617.17|ceruloplasmin	ENSMUST00000003714.13|Cp|ENSMUSG00000003617.17|ceruloplasmin
mm39_v1_chr19_-_58444336_58444346	2.77908	Foxa3	ENSMUST00000131877.2|Gfra1|ENSMUSG00000025089.16|glial cell line derived neurotrophic factor family receptor alpha 1
mm39_v1_chr18_+_36797113_36797177	2.73596	Foxa3	ENSMUST00000036765.8|Eif4ebp3|ENSMUSG00000090264.2|eukaryotic translation initiation factor 4E binding protein 3
mm39_v1_chr10_-_53952686_53952719	2.62793	Foxa3	ENSMUST00000220088.2|Man1a|ENSMUSG00000003746.17|mannosidase 1, alpha
mm39_v1_chr2_-_104573179_104573223	2.61074	Foxa3	ENSMUST00000028595.8|Depdc7|ENSMUSG00000027173.8|DEP domain containing 7
mm39_v1_chr3_+_107137924_107137933	2.60068	Foxa3	ENSMUST00000179399.3|A630076J17Rik|ENSMUSG00000094613.3|RIKEN cDNA A630076J17 gene
mm39_v1_chr11_+_78356523_78356561	2.29403	Foxa3	ENSMUST00000001126.4|Slc46a1|ENSMUSG00000020829.10|solute carrier family 46, member 1
mm39_v1_chr19_+_44980565_44980575	2.27793	Foxa3	ENSMUST00000179305.2|Sema4g|ENSMUSG00000025207.17|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
mm39_v1_chr9_-_44714263_44714369	2.23368	Foxa3	ENSMUST00000044694.8|Ttc36|ENSMUSG00000039438.8|tetratricopeptide repeat domain 36
mm39_v1_chr4_+_104770653_104770776	2.14704	Foxa3	ENSMUST00000106803.9|Fyb2|ENSMUSG00000078612.10|FYN binding protein 2	ENSMUST00000106804.2|Fyb2|ENSMUSG00000078612.10|FYN binding protein 2
mm39_v1_chr3_-_148696155_148696197	2.03958	Foxa3	ENSMUST00000196526.5|Adgrl2|ENSMUSG00000028184.13|adhesion G protein-coupled receptor L2	ENSMUST00000200543.5|Adgrl2|ENSMUSG00000028184.13|adhesion G protein-coupled receptor L2	ENSMUST00000200154.5|Adgrl2|ENSMUSG00000028184.13|adhesion G protein-coupled receptor L2
mm39_v1_chr4_+_148686985_148687041	2.02595	Foxa3	ENSMUST00000105701.9|Masp2|ENSMUSG00000028979.18|mannan-binding lectin serine peptidase 2	ENSMUST00000052060.7|Masp2|ENSMUSG00000028979.18|mannan-binding lectin serine peptidase 2
mm39_v1_chrX_+_141011173_141011246	2.0229	Foxa3	ENSMUST00000112914.8|Nxt2|ENSMUSG00000042271.14|nuclear transport factor 2-like export factor 2
mm39_v1_chr8_-_26275182_26275315	1.95171	Foxa3	ENSMUST00000038498.10|Bag4|ENSMUSG00000037316.10|BCL2-associated athanogene 4
mm39_v1_chr2_-_91025492_91025534	1.86253	Foxa3	ENSMUST00000111354.2|Nr1h3|ENSMUSG00000002108.11|nuclear receptor subfamily 1, group H, member 3
mm39_v1_chrX_+_141010919_141010946	1.78771	Foxa3	ENSMUST00000042329.12|Nxt2|ENSMUSG00000042271.14|nuclear transport factor 2-like export factor 2
mm39_v1_chr15_-_5137975_5138050	1.67179	Foxa3	ENSMUST00000118365.3|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr17_-_34847354_34847484	1.56415	Foxa3	ENSMUST00000167097.9|Ppt2|ENSMUSG00000015474.17|palmitoyl-protein thioesterase 2
mm39_v1_chr17_+_29077385_29077473	1.56407	Foxa3	ENSMUST00000056866.8|Pnpla1|ENSMUSG00000043286.13|patatin-like phospholipase domain containing 1
mm39_v1_chr1_+_172525613_172525630	1.54302	Foxa3	ENSMUST00000038495.5|Crp|ENSMUSG00000037942.6|C-reactive protein, pentraxin-related
mm39_v1_chr4_+_101574601_101574659	1.53	Foxa3	ENSMUST00000102777.10|Lepr|ENSMUSG00000057722.18|leptin receptor	ENSMUST00000106921.9|Lepr|ENSMUSG00000057722.18|leptin receptor	ENSMUST00000037552.10|Lepr|ENSMUSG00000057722.18|leptin receptor	ENSMUST00000145024.2|Lepr|ENSMUSG00000057722.18|leptin receptor
mm39_v1_chr11_+_108811168_108811184	1.49495	Foxa3	ENSMUST00000052915.14|Axin2|ENSMUSG00000000142.16|axin 2
mm39_v1_chr7_+_18962252_18962271	1.49275	Foxa3	ENSMUST00000063976.9|Opa3|ENSMUSG00000052214.10|optic atrophy 3
mm39_v1_chr3_+_85878376_85878482	1.46237	Foxa3	ENSMUST00000238443.2|Sh3d19|ENSMUSG00000028082.15|SH3 domain protein D19
mm39_v1_chr16_+_17149235_17149292	1.41428	Foxa3	ENSMUST00000023450.15|Serpind1|ENSMUSG00000022766.15|serine (or cysteine) peptidase inhibitor, clade D, member 1	ENSMUST00000231884.2|Serpind1|ENSMUSG00000022766.15|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm39_v1_chr6_+_34686373_34686381	1.39899	Foxa3	ENSMUST00000115021.8|Cald1|ENSMUSG00000029761.17|caldesmon 1
mm39_v1_chr15_-_5137951_5137971	1.37579	Foxa3	ENSMUST00000141020.2|Card6|ENSMUSG00000041849.8|caspase recruitment domain family, member 6
mm39_v1_chr18_+_56533389_56533447	1.34733	Foxa3	ENSMUST00000237355.2|Gramd3|ENSMUSG00000001700.11|GRAM domain containing 3	ENSMUST00000237422.2|Gramd3|ENSMUSG00000001700.11|GRAM domain containing 3
mm39_v1_chr1_+_75119472_75119624	1.34416	Foxa3	ENSMUST00000189650.7|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2
mm39_v1_chrX_-_55643429_55643467	1.31057	Foxa3	ENSMUST00000059899.3|Mmgt1|ENSMUSG00000061273.4|membrane magnesium transporter 1
mm39_v1_chr12_-_108241597_108241684	1.26961	Foxa3	ENSMUST00000222310.2|Ccdc85c|ENSMUSG00000084883.3|coiled-coil domain containing 85C
mm39_v1_chrX_+_108138965_108138981	1.24972	Foxa3	ENSMUST00000033598.9|Sh3bgrl|ENSMUSG00000031246.15|SH3-binding domain glutamic acid-rich protein like
mm39_v1_chr12_+_84498196_84498292	1.24861	Foxa3	ENSMUST00000137170.3|Lin52|ENSMUSG00000085793.3|lin-52 homolog (C. elegans)
mm39_v1_chr9_+_53212871_53212970	1.2431	Foxa3	ENSMUST00000051014.2|Exph5|ENSMUSG00000034584.4|exophilin 5
mm39_v1_chr10_-_57408512_57408583	1.18871	Foxa3	ENSMUST00000169122.8|Serinc1|ENSMUSG00000019877.11|serine incorporator 1
mm39_v1_chr17_-_80203457_80203552	1.17692	Foxa3	ENSMUST00000068282.7|Atl2|ENSMUSG00000059811.14|atlastin GTPase 2	ENSMUST00000112437.8|Atl2|ENSMUSG00000059811.14|atlastin GTPase 2
mm39_v1_chr12_+_59178072_59178255	1.17278	Foxa3	ENSMUST00000176464.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000170992.9|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000176322.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr1_+_75119419_75119443	1.13712	Foxa3	ENSMUST00000097694.11|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2	ENSMUST00000190240.7|Retreg2|ENSMUSG00000049339.17|reticulophagy regulator family member 2
mm39_v1_chr18_-_84104507_84104529	1.1158	Foxa3	ENSMUST00000060303.10|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr2_+_140237229_140237359	1.11396	Foxa3	ENSMUST00000110067.8|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2	ENSMUST00000110063.8|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2	ENSMUST00000110064.8|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2	ENSMUST00000110062.8|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2	ENSMUST00000043836.8|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2	ENSMUST00000078027.12|Macrod2|ENSMUSG00000068205.15|mono-ADP ribosylhydrolase 2
mm39_v1_chr5_+_88731386_88731449	1.10304	Foxa3	ENSMUST00000031229.11|Rufy3|ENSMUSG00000029291.12|RUN and FYVE domain containing 3
mm39_v1_chr2_-_90309509_90309522	1.09468	Foxa3	ENSMUST00000111495.9|Ptprj|ENSMUSG00000025314.17|protein tyrosine phosphatase, receptor type, J
mm39_v1_chr2_+_164675697_164675736	1.07693	Foxa3	ENSMUST00000143780.9|Ctsa|ENSMUSG00000017760.17|cathepsin A
mm39_v1_chr11_+_108811626_108811667	1.05233	Foxa3	ENSMUST00000140821.2|Axin2|ENSMUSG00000000142.16|axin 2
mm39_v1_chr11_-_69553390_69553423	1.0457	Foxa3	ENSMUST00000129224.8|Mpdu1|ENSMUSG00000018761.15|mannose-P-dolichol utilization defect 1	ENSMUST00000155200.8|Mpdu1|ENSMUSG00000018761.15|mannose-P-dolichol utilization defect 1
mm39_v1_chr15_-_99717956_99718037	1.03775	Foxa3	ENSMUST00000109024.9|Lima1|ENSMUSG00000023022.15|LIM domain and actin binding 1
mm39_v1_chr7_+_18962301_18962342	1.03686	Foxa3	ENSMUST00000161711.2|Opa3|ENSMUSG00000052214.10|optic atrophy 3
mm39_v1_chrX_+_149377416_149377474	1.00667	Foxa3	ENSMUST00000112713.3|Pfkfb1|ENSMUSG00000025271.14|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm39_v1_chr19_-_12773472_12773510	1.00602	Foxa3	ENSMUST00000038627.9|Zfp91|ENSMUSG00000024695.17|zinc finger protein 91
mm39_v1_chr5_+_102629240_102629257	1.00192	Foxa3	ENSMUST00000073302.12|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24	ENSMUST00000094559.9|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24
mm39_v1_chr15_-_6904450_6904450	0.994722	Foxa3	ENSMUST00000022746.13|Osmr|ENSMUSG00000022146.13|oncostatin M receptor	ENSMUST00000176826.2|Osmr|ENSMUSG00000022146.13|oncostatin M receptor
mm39_v1_chr4_+_45965327_45965342	0.98825	Foxa3	ENSMUST00000107777.9|Tdrd7|ENSMUSG00000035517.18|tudor domain containing 7
mm39_v1_chr12_+_59178258_59178288	0.976943	Foxa3	ENSMUST00000177162.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr10_-_57408585_57408626	0.969157	Foxa3	ENSMUST00000020027.11|Serinc1|ENSMUSG00000019877.11|serine incorporator 1
mm39_v1_chr2_+_153003212_153003227	0.94896	Foxa3	ENSMUST00000089027.3|Tm9sf4|ENSMUSG00000068040.11|transmembrane 9 superfamily member 4
mm39_v1_chr11_-_69553451_69553468	0.917148	Foxa3	ENSMUST00000018905.12|Mpdu1|ENSMUSG00000018761.15|mannose-P-dolichol utilization defect 1
mm39_v1_chr5_+_88731366_88731382	0.908636	Foxa3	ENSMUST00000199312.5|Rufy3|ENSMUSG00000029291.12|RUN and FYVE domain containing 3
mm39_v1_chr17_+_43671314_43671345	0.887377	Foxa3	ENSMUST00000226087.2|Adgrf5|ENSMUSG00000056492.7|adhesion G protein-coupled receptor F5
mm39_v1_chr14_-_40907106_40907128	0.88685	Foxa3	ENSMUST00000077136.5|Sftpd|ENSMUSG00000021795.11|surfactant associated protein D
mm39_v1_chr16_+_51851588_51851705	0.854351	Foxa3	ENSMUST00000114471.3|Cblb|ENSMUSG00000022637.12|Casitas B-lineage lymphoma b
mm39_v1_chr9_+_7692087_7692104	0.824081	Foxa3	ENSMUST00000018767.8|Mmp7|ENSMUSG00000018623.10|matrix metallopeptidase 7
mm39_v1_chr12_-_32000209_32000245	0.818618	Foxa3	ENSMUST00000176084.2|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000176103.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000167458.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr6_+_29348068_29348123	0.814427	Foxa3	ENSMUST00000173216.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000173694.5|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000172974.8|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000031779.17|Calu|ENSMUSG00000029767.17|calumenin	ENSMUST00000090481.14|Calu|ENSMUSG00000029767.17|calumenin
mm39_v1_chr11_-_54751738_54751738	0.806539	Foxa3	ENSMUST00000144164.9|Lyrm7|ENSMUSG00000020268.15|LYR motif containing 7
mm39_v1_chr18_-_84104574_84104615	0.795034	Foxa3	ENSMUST00000175783.3|Tshz1|ENSMUSG00000046982.12|teashirt zinc finger family member 1
mm39_v1_chr10_+_21868114_21868133	0.781807	Foxa3	ENSMUST00000150089.8|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1	ENSMUST00000100036.10|Sgk1|ENSMUSG00000019970.16|serum/glucocorticoid regulated kinase 1
mm39_v1_chr1_+_157353696_157353724	0.778838	Foxa3	ENSMUST00000111700.8|Sec16b|ENSMUSG00000026589.15|SEC16 homolog B (S. cerevisiae)
mm39_v1_chr15_+_9071331_9071361	0.756212	Foxa3	ENSMUST00000190591.10|Nadk2|ENSMUSG00000022253.18|NAD kinase 2, mitochondrial
mm39_v1_chr14_-_121976273_121976372	0.75552	Foxa3	ENSMUST00000212376.3|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9	ENSMUST00000239077.2|Dock9|ENSMUSG00000025558.20|dedicator of cytokinesis 9
mm39_v1_chr12_-_32000169_32000196	0.718888	Foxa3	ENSMUST00000176520.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr2_-_77349909_77349991	0.715458	Foxa3	ENSMUST00000111830.9|Zfp385b|ENSMUSG00000027016.18|zinc finger protein 385B
mm39_v1_chr15_-_3333003_3333044	0.694151	Foxa3	ENSMUST00000165386.2|Ccdc152|ENSMUSG00000091119.3|coiled-coil domain containing 152
mm39_v1_chr14_+_103284413_103284456	0.671424	Foxa3	ENSMUST00000022722.7|Acod1|ENSMUSG00000022126.7|aconitate decarboxylase 1
mm39_v1_chr13_+_89687915_89687915	0.669124	Foxa3	ENSMUST00000022108.9|Hapln1|ENSMUSG00000021613.10|hyaluronan and proteoglycan link protein 1
mm39_v1_chr9_+_32135540_32135560	0.667512	Foxa3	ENSMUST00000168954.9|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr7_+_92469100_92469128	0.637726	Foxa3	ENSMUST00000107180.8|Rab30|ENSMUSG00000030643.15|RAB30, member RAS oncogene family	ENSMUST00000107179.2|Rab30|ENSMUSG00000030643.15|RAB30, member RAS oncogene family
mm39_v1_chr13_+_24118417_24118445	0.635321	Foxa3	ENSMUST00000072391.2|H2ac1|ENSMUSG00000060081.2|H2A clustered histone 1
mm39_v1_chr17_+_34457868_34457938	0.613518	Foxa3	ENSMUST00000095342.11|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000167280.8|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus	ENSMUST00000236838.2|H2-Ob|ENSMUSG00000041538.17|histocompatibility 2, O region beta locus
mm39_v1_chr12_-_87247082_87247228	0.589015	Foxa3	ENSMUST00000037418.7|Tmed8|ENSMUSG00000034111.7|transmembrane p24 trafficking protein 8
mm39_v1_chr13_+_36301331_36301395	0.588866	Foxa3	ENSMUST00000021857.13|Fars2|ENSMUSG00000021420.14|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm39_v1_chr12_+_112645237_112645312	0.581317	Foxa3	ENSMUST00000174780.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000169593.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42	ENSMUST00000173942.2|Zbtb42|ENSMUSG00000037638.6|zinc finger and BTB domain containing 42
mm39_v1_chr1_-_168259264_168259319	0.580176	Foxa3	ENSMUST00000176790.8|Pbx1|ENSMUSG00000052534.16|pre B cell leukemia homeobox 1
mm39_v1_chr5_+_102629365_102629425	0.571412	Foxa3	ENSMUST00000112854.8|Arhgap24|ENSMUSG00000057315.15|Rho GTPase activating protein 24
mm39_v1_chr2_-_51039112_51039127	0.561432	Foxa3	ENSMUST00000154545.2|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3	ENSMUST00000017288.9|Rnd3|ENSMUSG00000017144.9|Rho family GTPase 3
mm39_v1_chr13_-_96678987_96679032	0.560578	Foxa3	ENSMUST00000022172.12|Polk|ENSMUSG00000021668.16|polymerase (DNA directed), kappa
mm39_v1_chr3_-_146487102_146487187	0.558589	Foxa3	ENSMUST00000005164.12|Prkacb|ENSMUSG00000005034.16|protein kinase, cAMP dependent, catalytic, beta
mm39_v1_chr11_-_46280336_46280351	0.529955	Foxa3	ENSMUST00000020664.13|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr11_+_96024612_96024612	0.506761	Foxa3	ENSMUST00000167258.8|Ttll6|ENSMUSG00000038756.14|tubulin tyrosine ligase-like family, member 6
mm39_v1_chr7_-_144761806_144761823	0.488177	Foxa3	ENSMUST00000208788.2|Smim38|ENSMUSG00000109305.2|small integral membrane protein 38
mm39_v1_chr9_+_78020554_78020659	0.457375	Foxa3	ENSMUST00000009972.6|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000117330.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1	ENSMUST00000044551.8|Cilk1|ENSMUSG00000009828.16|ciliogenesis associated kinase 1
mm39_v1_chr2_-_70885877_70885956	0.441758	Foxa3	ENSMUST00000090849.6|Mettl8|ENSMUSG00000041975.18|methyltransferase like 8	ENSMUST00000100037.9|Mettl8|ENSMUSG00000041975.18|methyltransferase like 8	ENSMUST00000112186.9|Mettl8|ENSMUSG00000041975.18|methyltransferase like 8
mm39_v1_chr17_-_43003135_43003180	0.43734	Foxa3	ENSMUST00000170723.8|Adgrf4|ENSMUSG00000023918.13|adhesion G protein-coupled receptor F4	ENSMUST00000164524.2|Adgrf4|ENSMUSG00000023918.13|adhesion G protein-coupled receptor F4	ENSMUST00000024711.11|Adgrf4|ENSMUSG00000023918.13|adhesion G protein-coupled receptor F4	ENSMUST00000167993.8|Adgrf4|ENSMUSG00000023918.13|adhesion G protein-coupled receptor F4
mm39_v1_chr4_+_137720326_137720359	0.428505	Foxa3	ENSMUST00000139759.8|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3	ENSMUST00000058133.10|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3	ENSMUST00000105830.9|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3	ENSMUST00000084215.12|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3
mm39_v1_chr17_-_31383976_31384033	0.426392	Foxa3	ENSMUST00000235870.2|Tff1|ENSMUSG00000024032.8|trefoil factor 1
mm39_v1_chr11_-_46280298_46280332	0.401695	Foxa3	ENSMUST00000109237.9|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr3_+_30800474_30800489	0.388898	Foxa3	ENSMUST00000108262.10|Samd7|ENSMUSG00000051860.14|sterile alpha motif domain containing 7
mm39_v1_chr11_+_23615612_23615697	0.387742	Foxa3	ENSMUST00000109525.8|Pus10|ENSMUSG00000020280.13|pseudouridylate synthase 10	ENSMUST00000020520.11|Pus10|ENSMUSG00000020280.13|pseudouridylate synthase 10
mm39_v1_chr15_+_54274151_54274193	0.377533	Foxa3	ENSMUST00000036737.4|Colec10|ENSMUSG00000038591.4|collectin sub-family member 10
mm39_v1_chr11_-_46280281_46280295	0.373664	Foxa3	ENSMUST00000101306.4|Itk|ENSMUSG00000020395.14|IL2 inducible T cell kinase
mm39_v1_chr7_+_101879176_101879230	0.367739	Foxa3	ENSMUST00000120119.9|Pgap2|ENSMUSG00000030990.19|post-GPI attachment to proteins 2
mm39_v1_chr12_+_87247297_87247318	0.35726	Foxa3	ENSMUST00000182869.2|Samd15|ENSMUSG00000090812.9|sterile alpha motif domain containing 15
mm39_v1_chr13_-_96678844_96678851	0.35298	Foxa3	ENSMUST00000223475.2|Polk|ENSMUSG00000021668.16|polymerase (DNA directed), kappa
mm39_v1_chr9_+_106247943_106248054	0.333896	Foxa3	ENSMUST00000173748.2|Dusp7|ENSMUSG00000053716.10|dual specificity phosphatase 7
mm39_v1_chr15_+_9071655_9071713	0.333762	Foxa3	ENSMUST00000227682.3|Nadk2|ENSMUSG00000022253.18|NAD kinase 2, mitochondrial
mm39_v1_chr1_+_32211792_32211968	0.333654	Foxa3	ENSMUST00000027226.12|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000189878.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000188257.7|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2	ENSMUST00000185666.2|Khdrbs2|ENSMUSG00000026058.12|KH domain containing, RNA binding, signal transduction associated 2
mm39_v1_chr5_+_38233901_38233917	0.322145	Foxa3	ENSMUST00000146864.6|Stx18|ENSMUSG00000029125.15|syntaxin 18
mm39_v1_chr10_-_128579879_128579954	0.32123	Foxa3	ENSMUST00000026414.9|Dgka|ENSMUSG00000025357.9|diacylglycerol kinase, alpha
mm39_v1_chr4_-_127247864_127247882	0.30634	Foxa3	ENSMUST00000106090.8|Gjb4|ENSMUSG00000046623.9|gap junction protein, beta 4	ENSMUST00000060419.2|Gjb4|ENSMUSG00000046623.9|gap junction protein, beta 4
mm39_v1_chr11_+_96177449_96177480	0.306314	Foxa3	ENSMUST00000049352.8|Hoxb7|ENSMUSG00000038721.9|homeobox B7
mm39_v1_chr10_-_128755127_128755174	0.299323	Foxa3	ENSMUST00000149961.2|Rdh5|ENSMUSG00000025350.16|retinol dehydrogenase 5	ENSMUST00000026406.14|Rdh5|ENSMUSG00000025350.16|retinol dehydrogenase 5
mm39_v1_chr2_+_65499097_65499113	0.290045	Foxa3	ENSMUST00000200829.4|Scn2a|ENSMUSG00000075318.14|sodium channel, voltage-gated, type II, alpha
mm39_v1_chr10_+_25308466_25308518	0.284588	Foxa3	ENSMUST00000219224.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2	ENSMUST00000219166.2|Epb41l2|ENSMUSG00000019978.17|erythrocyte membrane protein band 4.1 like 2
mm39_v1_chr6_-_99005212_99005274	0.281602	Foxa3	ENSMUST00000177437.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1	ENSMUST00000177229.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1	ENSMUST00000124058.8|Foxp1|ENSMUSG00000030067.18|forkhead box P1
mm39_v1_chr3_-_27764522_27764547	0.279632	Foxa3	ENSMUST00000195008.6|Fndc3b|ENSMUSG00000039286.13|fibronectin type III domain containing 3B
mm39_v1_chr18_+_40390013_40390076	0.278571	Foxa3	ENSMUST00000096572.2|Kctd16|ENSMUSG00000051401.8|potassium channel tetramerisation domain containing 16	ENSMUST00000236889.2|Kctd16|ENSMUSG00000051401.8|potassium channel tetramerisation domain containing 16
mm39_v1_chr3_+_66893280_66893326	0.25137	Foxa3	ENSMUST00000161726.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000160504.2|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr9_+_32135781_32135888	0.233185	Foxa3	ENSMUST00000183121.2|Arhgap32|ENSMUSG00000041444.15|Rho GTPase activating protein 32
mm39_v1_chr14_+_32321341_32321498	0.22727	Foxa3	ENSMUST00000187377.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000189022.8|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1	ENSMUST00000186452.7|Prrxl1|ENSMUSG00000041730.15|paired related homeobox protein-like 1
mm39_v1_chr8_-_48166955_48166973	0.221383	Foxa3	ENSMUST00000212175.2|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein	ENSMUST00000038738.7|Cdkn2aip|ENSMUSG00000038069.7|CDKN2A interacting protein
mm39_v1_chr4_+_126156118_126156173	0.219974	Foxa3	ENSMUST00000030660.9|Trappc3|ENSMUSG00000028847.9|trafficking protein particle complex 3
mm39_v1_chrX_-_107877909_107877987	0.218319	Foxa3	ENSMUST00000101283.4|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3	ENSMUST00000150434.8|Brwd3|ENSMUSG00000063663.12|bromodomain and WD repeat domain containing 3
mm39_v1_chr2_+_130975417_130975417	0.200455	Foxa3	ENSMUST00000110225.2|Gm11037|ENSMUSG00000079039.2|predicted gene 11037
mm39_v1_chr11_+_94455865_94455882	0.191953	Foxa3	ENSMUST00000040418.9|Chad|ENSMUSG00000039084.9|chondroadherin
mm39_v1_chr16_-_43484494_43484522	0.183666	Foxa3	ENSMUST00000096065.6|Tigit|ENSMUSG00000071552.6|T cell immunoreceptor with Ig and ITIM domains
mm39_v1_chr3_-_92346078_92346096	0.178626	Foxa3	ENSMUST00000062160.4|Sprr1b|ENSMUSG00000048455.10|small proline-rich protein 1B
mm39_v1_chr3_+_66893031_66893073	0.172035	Foxa3	ENSMUST00000046542.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000162693.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr12_-_32000534_32000558	0.168127	Foxa3	ENSMUST00000172314.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr3_+_33853941_33853981	0.166677	Foxa3	ENSMUST00000099153.10|Ttc14|ENSMUSG00000027677.18|tetratricopeptide repeat domain 14
mm39_v1_chr6_-_40590244_40590244	0.166424	Foxa3	ENSMUST00000076565.3|Tas2r138|ENSMUSG00000058250.3|taste receptor, type 2, member 138
mm39_v1_chr9_+_107457316_107457316	0.161565	Foxa3	ENSMUST00000093785.6|Naa80|ENSMUSG00000079334.9|N(alpha)-acetyltransferase 80, NatH catalytic subunit
mm39_v1_chr11_-_70560110_70560242	0.156579	Foxa3	ENSMUST00000129434.2|Spag7|ENSMUSG00000018287.13|sperm associated antigen 7	ENSMUST00000018431.13|Spag7|ENSMUSG00000018287.13|sperm associated antigen 7
mm39_v1_chr9_+_53757448_53757541	0.156137	Foxa3	ENSMUST00000048485.7|Sln|ENSMUSG00000042045.7|sarcolipin
mm39_v1_chr15_-_101778130_101778147	0.153292	Foxa3	ENSMUST00000087996.7|Krt77|ENSMUSG00000067594.7|keratin 77
mm39_v1_chr9_-_101076198_101076278	0.152475	Foxa3	ENSMUST00000066773.9|Ppp2r3a|ENSMUSG00000043154.16|protein phosphatase 2, regulatory subunit B'', alpha
mm39_v1_chr10_+_19497740_19497752	0.139666	Foxa3	ENSMUST00000036564.8|Il22ra2|ENSMUSG00000039760.9|interleukin 22 receptor, alpha 2
mm39_v1_chr18_+_38809771_38809771	0.139633	Foxa3	ENSMUST00000134388.2|9630014M24Rik|ENSMUSG00000118257.2|RIKEN cDNA 9630014M24 gene	ENSMUST00000148850.8|Arhgap26|ENSMUSG00000118193.2|Rho GTPase activating protein 26
mm39_v1_chr8_-_106723026_106723055	0.137993	Foxa3	ENSMUST00000227363.2|Dpep2|ENSMUSG00000115067.2|dipeptidase 2	ENSMUST00000081998.13|Dpep2|ENSMUSG00000115067.2|dipeptidase 2
mm39_v1_chr9_-_79920131_79920137	0.128562	Foxa3	ENSMUST00000217264.2|Filip1|ENSMUSG00000034898.18|filamin A interacting protein 1
mm39_v1_chr3_+_96127174_96127190	0.121483	Foxa3	ENSMUST00000073115.5|H2ac21|ENSMUSG00000063689.5|H2A clustered histone 21
mm39_v1_chr6_+_8948608_8948619	0.120156	Foxa3	ENSMUST00000160300.2|Nxph1|ENSMUSG00000046178.4|neurexophilin 1
mm39_v1_chr2_-_34261121_34261265	0.109656	Foxa3	ENSMUST00000127353.3|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3	ENSMUST00000141653.3|Pbx3|ENSMUSG00000038718.16|pre B cell leukemia homeobox 3
mm39_v1_chr13_+_83672965_83673010	0.106978	Foxa3	ENSMUST00000199432.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000198069.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000197681.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000197722.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C	ENSMUST00000197938.5|Mef2c|ENSMUSG00000005583.17|myocyte enhancer factor 2C
mm39_v1_chrX_-_144131890_144132085	0.102113	Foxa3	ENSMUST00000040084.10|Lhfpl1|ENSMUSG00000041700.10|lipoma HMGIC fusion partner-like 1	ENSMUST00000123443.2|Lhfpl1|ENSMUSG00000041700.10|lipoma HMGIC fusion partner-like 1
mm39_v1_chr2_+_69553141_69553189	0.101984	Foxa3	ENSMUST00000090858.10|Ppig|ENSMUSG00000042133.17|peptidyl-prolyl isomerase G (cyclophilin G)
mm39_v1_chr18_+_67266784_67266821	0.101854	Foxa3	ENSMUST00000236918.2|Gnal|ENSMUSG00000024524.18|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm39_v1_chr6_+_70699533_70699553	0.0974307	Foxa3	ENSMUST00000103405.2|Igkj1|ENSMUSG00000076604.2|immunoglobulin kappa joining 1
mm39_v1_chr2_-_167032068_167032093	0.0812136	Foxa3	ENSMUST00000059826.10|Kcnb1|ENSMUSG00000050556.10|potassium voltage gated channel, Shab-related subfamily, member 1
mm39_v1_chr4_+_42922253_42922268	0.0808546	Foxa3	ENSMUST00000139100.2|Phf24|ENSMUSG00000036062.14|PHD finger protein 24
mm39_v1_chr3_-_89671888_89671953	0.0790849	Foxa3	ENSMUST00000200558.5|Chrnb2|ENSMUSG00000027950.8|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)	ENSMUST00000029562.5|Chrnb2|ENSMUSG00000027950.8|cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal)
mm39_v1_chrX_+_139808351_139808384	0.0761367	Foxa3	ENSMUST00000033806.5|Vsig1|ENSMUSG00000031430.9|V-set and immunoglobulin domain containing 1
mm39_v1_chr1_-_64160557_64160650	0.073847	Foxa3	ENSMUST00000055001.10|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)	ENSMUST00000114086.8|Klf7|ENSMUSG00000025959.14|Kruppel-like factor 7 (ubiquitous)
mm39_v1_chr15_+_102315579_102315704	0.0698716	Foxa3	ENSMUST00000169619.2|Sp1|ENSMUSG00000001280.14|trans-acting transcription factor 1
mm39_v1_chr1_+_17215581_17215655	0.0646254	Foxa3	ENSMUST00000026879.8|Gdap1|ENSMUSG00000025777.9|ganglioside-induced differentiation-associated-protein 1
mm39_v1_chrX_-_104918911_104919032	0.063966	Foxa3	ENSMUST00000200471.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr1_+_165591315_165591353	0.0607196	Foxa3	ENSMUST00000111432.10|Creg1|ENSMUSG00000040713.13|cellular repressor of E1A-stimulated genes 1
mm39_v1_chr4_+_137720755_137720824	0.0552367	Foxa3	ENSMUST00000084214.12|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3	ENSMUST00000105831.9|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3	ENSMUST00000203828.3|Eif4g3|ENSMUSG00000028760.17|eukaryotic translation initiation factor 4 gamma, 3
mm39_v1_chr9_-_99599312_99599327	0.0546145	Foxa3	ENSMUST00000112882.9|Cldn18|ENSMUSG00000032473.14|claudin 18	ENSMUST00000131922.2|Cldn18|ENSMUSG00000032473.14|claudin 18
mm39_v1_chr9_-_112016966_112017005	0.0513034	Foxa3	ENSMUST00000178410.2|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21	ENSMUST00000172380.10|Arpp21|ENSMUSG00000032503.19|cyclic AMP-regulated phosphoprotein, 21
mm39_v1_chr18_+_36498826_36498838	0.0477718	Foxa3	ENSMUST00000144158.2|Cystm1|ENSMUSG00000046727.14|cysteine-rich transmembrane module containing 1
mm39_v1_chr5_-_28672091_28672254	0.0459319	Foxa3	ENSMUST00000002708.5|Shh|ENSMUSG00000002633.5|sonic hedgehog
mm39_v1_chr8_-_65582206_65582224	0.0457544	Foxa3	ENSMUST00000098713.5|Smim31|ENSMUSG00000074300.5|small integral membrane protein 31
mm39_v1_chr6_+_42377172_42377172	0.0383202	Foxa3	ENSMUST00000057398.4|Tas2r143|ENSMUSG00000046652.4|taste receptor, type 2, member 143
mm39_v1_chr6_-_98319684_98319715	0.0243908	Foxa3	ENSMUST00000164491.3|Mdfic2|ENSMUSG00000090667.3|MyoD family inhibitor domain containing 2
mm39_v1_chr11_-_69088635_69088669	0.022441	Foxa3	ENSMUST00000094078.4|Alox8|ENSMUSG00000020891.12|arachidonate 8-lipoxygenase	ENSMUST00000021262.10|Alox8|ENSMUSG00000020891.12|arachidonate 8-lipoxygenase
mm39_v1_chr2_+_96148418_96148561	0.0223591	Foxa3	ENSMUST00000135431.8|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C	ENSMUST00000162807.9|Lrrc4c|ENSMUSG00000050587.15|leucine rich repeat containing 4C
mm39_v1_chr10_-_81066607_81066667	0.0157741	Foxa3	ENSMUST00000047408.6|Atcay|ENSMUSG00000034958.12|ataxia, cerebellar, Cayman type
mm39_v1_chr6_+_34840151_34840197	0.0125673	Foxa3	ENSMUST00000202010.2|Tmem140|ENSMUSG00000057137.10|transmembrane protein 140
mm39_v1_chr12_+_31315270_31315321	0.0121254	Foxa3	ENSMUST00000002979.16|Lamb1|ENSMUSG00000002900.18|laminin B1	ENSMUST00000239496.2|Lamb1|ENSMUSG00000002900.18|laminin B1	ENSMUST00000170495.3|Lamb1|ENSMUSG00000002900.18|laminin B1
mm39_v1_chr19_+_26600820_26600872	0.0117725	Foxa3	ENSMUST00000176584.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr12_+_31315227_31315266	0.0109516	Foxa3	ENSMUST00000169088.8|Lamb1|ENSMUSG00000002900.18|laminin B1
mm39_v1_chr14_-_48900192_48900329	0.0109137	Foxa3	ENSMUST00000122009.8|Otx2|ENSMUSG00000021848.17|orthodenticle homeobox 2
mm39_v1_chr3_+_66892979_66893026	0.00986876	Foxa3	ENSMUST00000162362.8|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065074.14|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1	ENSMUST00000065047.13|Rsrc1|ENSMUSG00000034544.18|arginine/serine-rich coiled-coil 1
mm39_v1_chr3_+_65435878_65435892	0.00557317	Foxa3	ENSMUST00000130705.2|Tiparp|ENSMUSG00000034640.10|TCDD-inducible poly(ADP-ribose) polymerase
mm39_v1_chr2_+_119803230_119803384	0.00409872	Foxa3	ENSMUST00000229024.2|Mapkbp1|ENSMUSG00000033902.13|mitogen-activated protein kinase binding protein 1
mm39_v1_chr2_+_164339438_164339480	0.00389128	Foxa3	ENSMUST00000103101.11|Pigt|ENSMUSG00000017721.16|phosphatidylinositol glycan anchor biosynthesis, class T	ENSMUST00000117066.8|Pigt|ENSMUSG00000017721.16|phosphatidylinositol glycan anchor biosynthesis, class T
mm39_v1_chr10_+_59942274_59942290	0.000897491	Foxa3	ENSMUST00000165024.3|Spock2|ENSMUSG00000058297.17|sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2
