mm39_v1_chr19_+_39275518_39275548	21.5407	Emx1_Emx2	ENSMUST00000003137.15|Cyp2c29|ENSMUSG00000003053.18|cytochrome P450, family 2, subfamily c, polypeptide 29
mm39_v1_chr4_-_61972348_61972395	20.7892	Emx1_Emx2	ENSMUST00000074018.4|Mup20|ENSMUSG00000078672.3|major urinary protein 20
mm39_v1_chr4_-_60070411_60070475	20.3943	Emx1_Emx2	ENSMUST00000079697.10|Mup7|ENSMUSG00000073842.11|major urinary protein 7	ENSMUST00000125282.2|Mup7|ENSMUSG00000073842.11|major urinary protein 7	ENSMUST00000166098.8|Mup7|ENSMUSG00000073842.11|major urinary protein 7
mm39_v1_chr4_-_61357980_61357980	11.7282	Emx1_Emx2	ENSMUST00000095049.5|Mup15|ENSMUSG00000096674.2|major urinary protein 15
mm39_v1_chr13_+_4486105_4486145	8.73565	Emx1_Emx2	ENSMUST00000156277.2|Akr1c6|ENSMUSG00000021210.17|aldo-keto reductase family 1, member C6
mm39_v1_chr5_-_89605622_89605757	7.89162	Emx1_Emx2	ENSMUST00000049209.13|Gc|ENSMUSG00000035540.13|vitamin D binding protein
mm39_v1_chr19_-_39451509_39451525	7.81066	Emx1_Emx2	ENSMUST00000035488.3|Cyp2c38|ENSMUSG00000032808.3|cytochrome P450, family 2, subfamily c, polypeptide 38
mm39_v1_chr1_+_130754413_130754625	7.79123	Emx1_Emx2	ENSMUST00000027675.14|Pigr|ENSMUSG00000026417.14|polymeric immunoglobulin receptor	ENSMUST00000133792.8|Pigr|ENSMUSG00000026417.14|polymeric immunoglobulin receptor
mm39_v1_chr5_-_87240405_87240422	7.35286	Emx1_Emx2	ENSMUST00000132667.2|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36	ENSMUST00000145617.8|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36	ENSMUST00000094649.11|Ugt2b36|ENSMUSG00000070704.11|UDP glucuronosyltransferase 2 family, polypeptide B36
mm39_v1_chr18_-_38999755_38999801	6.417	Emx1_Emx2	ENSMUST00000115582.8|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000236060.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr19_-_39637489_39637506	6.06049	Emx1_Emx2	ENSMUST00000067328.7|Cyp2c67|ENSMUSG00000062624.6|cytochrome P450, family 2, subfamily c, polypeptide 67
mm39_v1_chr16_+_22737128_22737135	5.33476	Emx1_Emx2	ENSMUST00000170805.9|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr16_+_22737227_22737249	5.19182	Emx1_Emx2	ENSMUST00000231880.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr16_+_22737050_22737084	5.08466	Emx1_Emx2	ENSMUST00000231768.2|Fetub|ENSMUSG00000022871.14|fetuin beta
mm39_v1_chr2_-_157408239_157408281	5.08375	Emx1_Emx2	ENSMUST00000109528.9|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein	ENSMUST00000088494.3|Blcap|ENSMUSG00000067787.11|bladder cancer associated protein
mm39_v1_chr5_+_45650716_45650726	5.02352	Emx1_Emx2	ENSMUST00000046122.11|Lap3|ENSMUSG00000039682.13|leucine aminopeptidase 3
mm39_v1_chr19_-_39801188_39801258	4.77515	Emx1_Emx2	ENSMUST00000162507.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000160476.9|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40	ENSMUST00000239028.2|Cyp2c40|ENSMUSG00000025004.17|cytochrome P450, family 2, subfamily c, polypeptide 40
mm39_v1_chr15_+_100202079_100202124	4.30301	Emx1_Emx2	ENSMUST00000230252.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1	ENSMUST00000231166.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr1_-_139708906_139709001	4.29758	Emx1_Emx2	ENSMUST00000111986.8|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4	ENSMUST00000027612.11|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4	ENSMUST00000111989.9|Cfhr4|ENSMUSG00000070594.11|complement factor H-related 4
mm39_v1_chr2_-_86180622_86180628	4.23967	Emx1_Emx2	ENSMUST00000099894.5|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055	ENSMUST00000213564.3|Olfr1055|ENSMUSG00000075189.6|olfactory receptor 1055
mm39_v1_chr1_-_139786421_139786467	4.23902	Emx1_Emx2	ENSMUST00000194186.6|Cfhr2|ENSMUSG00000033898.18|complement factor H-related 2	ENSMUST00000094489.5|Cfhr2|ENSMUSG00000033898.18|complement factor H-related 2	ENSMUST00000239380.2|Cfhr2|ENSMUSG00000033898.18|complement factor H-related 2
mm39_v1_chr15_+_100202061_100202073	4.21019	Emx1_Emx2	ENSMUST00000229574.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1	ENSMUST00000229217.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr1_+_58152295_58152345	4.13574	Emx1_Emx2	ENSMUST00000040999.14|Aox3|ENSMUSG00000064294.13|aldehyde oxidase 3	ENSMUST00000162011.3|Aox3|ENSMUSG00000064294.13|aldehyde oxidase 3
mm39_v1_chr17_-_36343573_36343747	3.82808	Emx1_Emx2	ENSMUST00000102678.5|H2-T23|ENSMUSG00000067212.9|histocompatibility 2, T region locus 23
mm39_v1_chr15_+_100202021_100202057	3.81414	Emx1_Emx2	ENSMUST00000230472.2|Mettl7a1|ENSMUSG00000054619.8|methyltransferase like 7A1
mm39_v1_chr17_+_56312672_56312712	3.37819	Emx1_Emx2	ENSMUST00000133998.8|Mpnd|ENSMUSG00000003199.17|MPN domain containing
mm39_v1_chr9_+_21634779_21634911	3.3533	Emx1_Emx2	ENSMUST00000034713.9|Ldlr|ENSMUSG00000032193.10|low density lipoprotein receptor
mm39_v1_chr4_-_107975723_107975751	3.34474	Emx1_Emx2	ENSMUST00000030340.15|Scp2|ENSMUSG00000028603.16|sterol carrier protein 2, liver
mm39_v1_chrX_-_8059597_8059751	3.28036	Emx1_Emx2	ENSMUST00000143223.2|Ebp|ENSMUSG00000031168.15|phenylalkylamine Ca2+ antagonist (emopamil) binding protein	ENSMUST00000033509.15|Ebp|ENSMUSG00000031168.15|phenylalkylamine Ca2+ antagonist (emopamil) binding protein
mm39_v1_chr5_-_87682972_87683005	2.89204	Emx1_Emx2	ENSMUST00000120150.2|Sult1b1|ENSMUSG00000029269.12|sulfotransferase family 1B, member 1
mm39_v1_chr14_+_55797468_55797503	2.7297	Emx1_Emx2	ENSMUST00000147981.2|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11	ENSMUST00000133256.8|Dcaf11|ENSMUSG00000022214.16|DDB1 and CUL4 associated factor 11
mm39_v1_chr2_-_17465410_17465446	2.55838	Emx1_Emx2	ENSMUST00000145492.2|Nebl|ENSMUSG00000053702.17|nebulette
mm39_v1_chr6_+_129510331_129510514	2.55486	Emx1_Emx2	ENSMUST00000204956.2|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	ENSMUST00000204639.2|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm39_v1_chr14_+_118374511_118374590	2.26822	Emx1_Emx2	ENSMUST00000022728.4|Gpr180|ENSMUSG00000022131.4|G protein-coupled receptor 180
mm39_v1_chr6_+_129510117_129510144	2.22084	Emx1_Emx2	ENSMUST00000032264.9|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm39_v1_chr6_+_129510145_129510169	2.12832	Emx1_Emx2	ENSMUST00000204487.3|Gabarapl1|ENSMUSG00000030161.9|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm39_v1_chr7_-_101494472_101494549	2.11752	Emx1_Emx2	ENSMUST00000211566.2|Folr2|ENSMUSG00000032725.11|folate receptor 2 (fetal)	ENSMUST00000094141.7|Folr2|ENSMUSG00000032725.11|folate receptor 2 (fetal)	ENSMUST00000209329.2|Folr2|ENSMUSG00000032725.11|folate receptor 2 (fetal)
mm39_v1_chr9_+_78099229_78099282	2.09846	Emx1_Emx2	ENSMUST00000034903.7|Gsta4|ENSMUSG00000032348.7|glutathione S-transferase, alpha 4
mm39_v1_chr16_+_11224481_11224539	2.08924	Emx1_Emx2	ENSMUST00000122168.8|Snx29|ENSMUSG00000071669.15|sorting nexin 29
mm39_v1_chr16_-_43836681_43836799	1.94746	Emx1_Emx2	ENSMUST00000036174.10|Gramd1c|ENSMUSG00000036292.15|GRAM domain containing 1C
mm39_v1_chr5_+_104350475_104350490	1.87435	Emx1_Emx2	ENSMUST00000066708.7|Dmp1|ENSMUSG00000029307.8|dentin matrix protein 1
mm39_v1_chr4_-_150998857_150998937	1.80066	Emx1_Emx2	ENSMUST00000105675.8|Park7|ENSMUSG00000028964.15|Parkinson disease (autosomal recessive, early onset) 7
mm39_v1_chr1_-_162726234_162726297	1.77418	Emx1_Emx2	ENSMUST00000111510.8|Fmo2|ENSMUSG00000040170.14|flavin containing monooxygenase 2	ENSMUST00000045902.13|Fmo2|ENSMUSG00000040170.14|flavin containing monooxygenase 2
mm39_v1_chr11_-_54140462_54140493	1.72163	Emx1_Emx2	ENSMUST00000019060.6|Csf2|ENSMUSG00000018916.6|colony stimulating factor 2 (granulocyte-macrophage)
mm39_v1_chr6_+_41248311_41248345	1.71636	Emx1_Emx2	ENSMUST00000103281.3|Trbv29|ENSMUSG00000076480.3|T cell receptor beta, variable 29
mm39_v1_chr7_+_126380655_126380655	1.69784	Emx1_Emx2	ENSMUST00000172352.8|Tbx6|ENSMUSG00000030699.17|T-box 6	ENSMUST00000094037.5|Tbx6|ENSMUSG00000030699.17|T-box 6
mm39_v1_chr11_+_109434519_109434580	1.60599	Emx1_Emx2	ENSMUST00000106696.2|Arsg|ENSMUSG00000020604.14|arylsulfatase G
mm39_v1_chr18_-_66135683_66135714	1.60104	Emx1_Emx2	ENSMUST00000120461.9|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000048260.15|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1	ENSMUST00000236866.2|Lman1|ENSMUSG00000041891.17|lectin, mannose-binding, 1
mm39_v1_chr13_-_4659120_4659188	1.60096	Emx1_Emx2	ENSMUST00000091848.7|Akr1e1|ENSMUSG00000045410.19|aldo-keto reductase family 1, member E1	ENSMUST00000110691.10|Akr1e1|ENSMUSG00000045410.19|aldo-keto reductase family 1, member E1
mm39_v1_chr18_-_39000056_39000070	1.55784	Emx1_Emx2	ENSMUST00000236630.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1	ENSMUST00000237356.2|Fgf1|ENSMUSG00000036585.17|fibroblast growth factor 1
mm39_v1_chr2_-_12424212_12424291	1.54362	Emx1_Emx2	ENSMUST00000124603.8|Mindy3|ENSMUSG00000026767.13|MINDY lysine 48 deubiquitinase 3	ENSMUST00000129993.3|Mindy3|ENSMUSG00000026767.13|MINDY lysine 48 deubiquitinase 3	ENSMUST00000028105.13|Mindy3|ENSMUSG00000026767.13|MINDY lysine 48 deubiquitinase 3
mm39_v1_chr2_+_144435974_144436003	1.46558	Emx1_Emx2	ENSMUST00000136628.2|Smim26|ENSMUSG00000074754.5|small integral membrane protein 26
mm39_v1_chr12_+_84332006_84332188	1.44885	Emx1_Emx2	ENSMUST00000123614.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000147363.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000135001.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2	ENSMUST00000146377.8|Ptgr2|ENSMUSG00000072946.13|prostaglandin reductase 2
mm39_v1_chr17_+_79919267_79919292	1.40962	Emx1_Emx2	ENSMUST00000223924.2|Rmdn2|ENSMUSG00000036368.9|regulator of microtubule dynamics 2
mm39_v1_chr4_-_82423944_82423978	1.40692	Emx1_Emx2	ENSMUST00000107248.8|Nfib|ENSMUSG00000008575.18|nuclear factor I/B	ENSMUST00000107247.8|Nfib|ENSMUSG00000008575.18|nuclear factor I/B
mm39_v1_chr10_+_128158413_128158443	1.4006	Emx1_Emx2	ENSMUST00000219836.2|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2
mm39_v1_chr11_+_99755302_99755302	1.3816	Emx1_Emx2	ENSMUST00000092694.4|Gm11559|ENSMUSG00000090225.2|predicted gene 11559
mm39_v1_chr11_-_49004584_49004584	1.36838	Emx1_Emx2	ENSMUST00000203007.2|Olfr1396|ENSMUSG00000047511.7|olfactory receptor 1396
mm39_v1_chr17_+_15163446_15163463	1.35517	Emx1_Emx2	ENSMUST00000052691.9|1600012H06Rik|ENSMUSG00000050088.10|RIKEN cDNA 1600012H06 gene
mm39_v1_chr10_-_85847697_85847761	1.25613	Emx1_Emx2	ENSMUST00000105304.2|Bpifc|ENSMUSG00000050108.13|BPI fold containing family C	ENSMUST00000061699.12|Bpifc|ENSMUSG00000050108.13|BPI fold containing family C
mm39_v1_chr12_-_55045887_55045928	1.25289	Emx1_Emx2	ENSMUST00000173529.2|Baz1a|ENSMUSG00000035021.14|bromodomain adjacent to zinc finger domain 1A
mm39_v1_chr10_+_128158328_128158362	1.23209	Emx1_Emx2	ENSMUST00000219037.2|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2	ENSMUST00000026446.4|Cnpy2|ENSMUSG00000025381.4|canopy FGF signaling regulator 2
mm39_v1_chr11_-_12362136_12362153	1.20459	Emx1_Emx2	ENSMUST00000174874.8|Cobl|ENSMUSG00000020173.18|cordon-bleu WH2 repeat
mm39_v1_chr18_-_73887528_73887575	1.20452	Emx1_Emx2	ENSMUST00000041138.3|Elac1|ENSMUSG00000036941.3|elaC ribonuclease Z 1
mm39_v1_chr9_+_50466127_50466150	1.17813	Emx1_Emx2	ENSMUST00000213916.2|Il18|ENSMUSG00000039217.14|interleukin 18
mm39_v1_chr1_-_63215952_63215992	1.17312	Emx1_Emx2	ENSMUST00000185412.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000027111.15|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000189664.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chr14_+_14210932_14210941	1.12292	Emx1_Emx2	ENSMUST00000022271.14|Acox2|ENSMUSG00000021751.14|acyl-Coenzyme A oxidase 2, branched chain
mm39_v1_chr2_-_89555356_89555356	1.10092	Emx1_Emx2	ENSMUST00000216203.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252	ENSMUST00000213196.2|Olfr1252|ENSMUSG00000110819.2|olfactory receptor 1252
mm39_v1_chrX_-_159777661_159777700	1.10038	Emx1_Emx2	ENSMUST00000087104.11|Cdkl5|ENSMUSG00000031292.15|cyclin-dependent kinase-like 5
mm39_v1_chr15_-_103473481_103473515	1.07787	Emx1_Emx2	ENSMUST00000228060.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000228895.2|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1	ENSMUST00000023134.5|Glycam1|ENSMUSG00000022491.6|glycosylation dependent cell adhesion molecule 1
mm39_v1_chr10_-_8632519_8632533	1.07084	Emx1_Emx2	ENSMUST00000212869.2|Sash1|ENSMUSG00000015305.7|SAM and SH3 domain containing 1
mm39_v1_chr2_-_119493237_119493338	1.05161	Emx1_Emx2	ENSMUST00000028768.2|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1	ENSMUST00000110801.8|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1	ENSMUST00000110802.8|Ndufaf1|ENSMUSG00000027305.10|NADH:ubiquinone oxidoreductase complex assembly factor 1
mm39_v1_chr13_-_24118139_24118212	1.05119	Emx1_Emx2	ENSMUST00000052776.4|H2bc1|ENSMUSG00000050799.4|H2B clustered histone 1
mm39_v1_chr17_-_40630096_40630099	1.0458	Emx1_Emx2	ENSMUST00000026498.5|Crisp1|ENSMUSG00000025431.5|cysteine-rich secretory protein 1
mm39_v1_chr5_-_3697806_3698008	1.03744	Emx1_Emx2	ENSMUST00000119783.2|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1	ENSMUST00000007559.15|Gatad1|ENSMUSG00000007415.16|GATA zinc finger domain containing 1
mm39_v1_chr11_+_17207558_17207688	1.02514	Emx1_Emx2	ENSMUST00000000594.9|C1d|ENSMUSG00000000581.9|C1D nuclear receptor co-repressor	ENSMUST00000156784.2|C1d|ENSMUSG00000000581.9|C1D nuclear receptor co-repressor
mm39_v1_chr2_+_69619991_69620086	1.015	Emx1_Emx2	ENSMUST00000112266.8|Phospho2|ENSMUSG00000027088.11|phosphatase, orphan 2
mm39_v1_chr8_+_45960804_45960847	1.00814	Emx1_Emx2	ENSMUST00000067065.14|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000124544.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000138049.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000132139.9|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr17_+_29493049_29493104	1.00319	Emx1_Emx2	ENSMUST00000149405.4|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr10_-_128885867_128885867	0.990827	Emx1_Emx2	ENSMUST00000216460.2|Olfr765|ENSMUSG00000056853.4|olfactory receptor 765
mm39_v1_chr17_+_15163466_15163543	0.930684	Emx1_Emx2	ENSMUST00000164837.3|1600012H06Rik|ENSMUSG00000050088.10|RIKEN cDNA 1600012H06 gene	ENSMUST00000174004.2|1600012H06Rik|ENSMUSG00000050088.10|RIKEN cDNA 1600012H06 gene
mm39_v1_chr2_+_36575800_36575800	0.916156	Emx1_Emx2	ENSMUST00000213258.2|Olfr346|ENSMUSG00000094764.3|olfactory receptor 346
mm39_v1_chr1_-_158183894_158183914	0.914096	Emx1_Emx2	ENSMUST00000004133.11|Brinp2|ENSMUSG00000004031.14|bone morphogenic protein/retinoic acid inducible neural-specific 2
mm39_v1_chr4_+_138606671_138606710	0.910126	Emx1_Emx2	ENSMUST00000105804.2|Pla2g2e|ENSMUSG00000028751.14|phospholipase A2, group IIE
mm39_v1_chrM_+_11735_11751	0.906018	Emx1_Emx2	ENSMUST00000082418.1|mt-Nd5|ENSMUSG00000064367.1|mitochondrially encoded NADH dehydrogenase 5
mm39_v1_chr10_-_81243475_81243515	0.905142	Emx1_Emx2	ENSMUST00000140916.8|Nfic|ENSMUSG00000055053.19|nuclear factor I/C
mm39_v1_chr17_-_15163362_15163386	0.898271	Emx1_Emx2	ENSMUST00000238668.2|Wdr27|ENSMUSG00000046991.13|WD repeat domain 27	ENSMUST00000228330.2|Wdr27|ENSMUSG00000046991.13|WD repeat domain 27
mm39_v1_chrX_-_55643429_55643467	0.895667	Emx1_Emx2	ENSMUST00000059899.3|Mmgt1|ENSMUSG00000061273.4|membrane magnesium transporter 1
mm39_v1_chr1_-_37535170_37535187	0.893992	Emx1_Emx2	ENSMUST00000148047.2|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr15_-_5093222_5093240	0.885397	Emx1_Emx2	ENSMUST00000110689.5|C7|ENSMUSG00000079105.5|complement component 7
mm39_v1_chr8_+_45960931_45960955	0.878399	Emx1_Emx2	ENSMUST00000171337.10|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2	ENSMUST00000067107.15|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr1_-_162726053_162726062	0.877702	Emx1_Emx2	ENSMUST00000143123.3|Fmo2|ENSMUSG00000040170.14|flavin containing monooxygenase 2
mm39_v1_chr17_+_29493113_29493136	0.870542	Emx1_Emx2	ENSMUST00000234326.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004	ENSMUST00000235117.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr15_+_99192968_99193162	0.864387	Emx1_Emx2	ENSMUST00000128352.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B	ENSMUST00000145482.8|Prpf40b|ENSMUSG00000023007.16|pre-mRNA processing factor 40B
mm39_v1_chr2_-_12424189_12424211	0.856353	Emx1_Emx2	ENSMUST00000124515.2|Mindy3|ENSMUSG00000026767.13|MINDY lysine 48 deubiquitinase 3
mm39_v1_chr17_-_45910529_45910550	0.849602	Emx1_Emx2	ENSMUST00000171847.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1	ENSMUST00000166633.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1	ENSMUST00000169729.8|Slc29a1|ENSMUSG00000023942.16|solute carrier family 29 (nucleoside transporters), member 1
mm39_v1_chr10_-_39039790_39039790	0.847501	Emx1_Emx2	ENSMUST00000076713.6|Ccn6|ENSMUSG00000062074.8|cellular communication network factor 6
mm39_v1_chr7_+_129193581_129193601	0.844985	Emx1_Emx2	ENSMUST00000084519.7|Wdr11|ENSMUSG00000042055.14|WD repeat domain 11
mm39_v1_chr8_+_72973560_72973636	0.837754	Emx1_Emx2	ENSMUST00000003123.10|Fam32a|ENSMUSG00000003039.10|family with sequence similarity 32, member A
mm39_v1_chr3_+_108479015_108479015	0.798389	Emx1_Emx2	ENSMUST00000143054.2|Taf13|ENSMUSG00000048100.14|TATA-box binding protein associated factor 13
mm39_v1_chr13_-_43634695_43634823	0.791141	Emx1_Emx2	ENSMUST00000144326.4|Ranbp9|ENSMUSG00000038546.10|RAN binding protein 9
mm39_v1_chr4_+_150999019_150999071	0.776899	Emx1_Emx2	ENSMUST00000135169.8|Tnfrsf9|ENSMUSG00000028965.14|tumor necrosis factor receptor superfamily, member 9
mm39_v1_chr14_-_51433380_51433380	0.773898	Emx1_Emx2	ENSMUST00000051274.2|Ang2|ENSMUSG00000047894.3|angiogenin, ribonuclease A family, member 2
mm39_v1_chr2_-_155772110_155772230	0.764197	Emx1_Emx2	ENSMUST00000109636.11|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000109631.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1
mm39_v1_chr13_+_19374502_19374538	0.754507	Emx1_Emx2	ENSMUST00000198330.2|Trgv6|ENSMUSG00000076746.4|T cell receptor gamma, variable 6	ENSMUST00000103555.3|Trgv6|ENSMUSG00000076746.4|T cell receptor gamma, variable 6
mm39_v1_chr8_-_126625029_126625061	0.736356	Emx1_Emx2	ENSMUST00000047239.13|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2	ENSMUST00000131127.3|Pcnx2|ENSMUSG00000060212.14|pecanex homolog 2
mm39_v1_chr1_-_63215812_63215891	0.730255	Emx1_Emx2	ENSMUST00000185847.2|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000185732.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000188370.7|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1	ENSMUST00000168099.9|Ndufs1|ENSMUSG00000025968.17|NADH:ubiquinone oxidoreductase core subunit S1
mm39_v1_chr6_-_57512355_57512433	0.728884	Emx1_Emx2	ENSMUST00000042766.6|Ppm1k|ENSMUSG00000037826.6|protein phosphatase 1K (PP2C domain containing)
mm39_v1_chr12_-_84664001_84664203	0.72488	Emx1_Emx2	ENSMUST00000221070.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000021666.6|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4	ENSMUST00000223107.2|Abcd4|ENSMUSG00000021240.7|ATP-binding cassette, sub-family D (ALD), member 4
mm39_v1_chr17_+_29493157_29493178	0.715125	Emx1_Emx2	ENSMUST00000234234.2|BC004004|ENSMUSG00000052712.18|cDNA sequence BC004004
mm39_v1_chr4_+_127019826_127019873	0.7135	Emx1_Emx2	ENSMUST00000094712.5|Tmem35b|ENSMUSG00000070737.11|transmembrane protein 35B
mm39_v1_chr9_-_15212745_15212846	0.71167	Emx1_Emx2	ENSMUST00000217042.2|4931406C07Rik|ENSMUSG00000031938.16|RIKEN cDNA 4931406C07 gene
mm39_v1_chr4_-_149184259_149184333	0.709376	Emx1_Emx2	ENSMUST00000103217.11|Pex14|ENSMUSG00000028975.17|peroxisomal biogenesis factor 14
mm39_v1_chr8_-_22396428_22396453	0.706942	Emx1_Emx2	ENSMUST00000051965.5|Defb11|ENSMUSG00000045337.5|defensin beta 11
mm39_v1_chr12_+_74044435_74044519	0.705217	Emx1_Emx2	ENSMUST00000221220.2|Syt16|ENSMUSG00000044912.12|synaptotagmin XVI
mm39_v1_chr7_+_79896121_79896177	0.689392	Emx1_Emx2	ENSMUST00000058266.9|Ttll13|ENSMUSG00000045467.14|tubulin tyrosine ligase-like family, member 13
mm39_v1_chr7_-_121700958_121701109	0.681086	Emx1_Emx2	ENSMUST00000139456.2|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000106471.9|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000123296.8|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1	ENSMUST00000033157.10|Ndufab1|ENSMUSG00000030869.12|NADH:ubiquinone oxidoreductase subunit AB1
mm39_v1_chr16_-_92155762_92155813	0.669895	Emx1_Emx2	ENSMUST00000166707.3|Kcne1|ENSMUSG00000039639.8|potassium voltage-gated channel, Isk-related subfamily, member 1
mm39_v1_chr2_+_36263531_36263590	0.66987	Emx1_Emx2	ENSMUST00000072114.4|Olfr338|ENSMUSG00000068950.4|olfactory receptor 338	ENSMUST00000217511.2|Olfr338|ENSMUSG00000068950.4|olfactory receptor 338
mm39_v1_chr4_+_150321272_150321409	0.656789	Emx1_Emx2	ENSMUST00000080926.13|Eno1|ENSMUSG00000063524.14|enolase 1, alpha non-neuron
mm39_v1_chr5_-_139330906_139330988	0.646556	Emx1_Emx2	ENSMUST00000049630.13|Cox19|ENSMUSG00000045438.13|cytochrome c oxidase assembly protein 19
mm39_v1_chr14_-_96756503_96756538	0.642456	Emx1_Emx2	ENSMUST00000022666.9|Klhl1|ENSMUSG00000022076.11|kelch-like 1
mm39_v1_chr15_-_36496880_36496966	0.629973	Emx1_Emx2	ENSMUST00000228601.2|Ankrd46|ENSMUSG00000048307.9|ankyrin repeat domain 46	ENSMUST00000057486.9|Ankrd46|ENSMUSG00000048307.9|ankyrin repeat domain 46
mm39_v1_chr6_-_123830422_123830422	0.628529	Emx1_Emx2	ENSMUST00000162046.3|Vmn2r25|ENSMUSG00000094672.3|vomeronasal 2, receptor 25
mm39_v1_chr6_-_13607963_13608099	0.626919	Emx1_Emx2	ENSMUST00000031554.9|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168	ENSMUST00000149123.3|Tmem168|ENSMUSG00000029569.10|transmembrane protein 168
mm39_v1_chr11_+_73262072_73262072	0.62279	Emx1_Emx2	ENSMUST00000078952.9|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376	ENSMUST00000120401.9|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376	ENSMUST00000170592.4|Olfr376|ENSMUSG00000063881.12|olfactory receptor 376
mm39_v1_chr8_-_10027650_10027690	0.621979	Emx1_Emx2	ENSMUST00000170033.2|Lig4|ENSMUSG00000049717.10|ligase IV, DNA, ATP-dependent
mm39_v1_chr7_+_11770679_11770679	0.61961	Emx1_Emx2	ENSMUST00000228213.2|Vmn1r77|ENSMUSG00000095864.3|vomeronasal 1 receptor 77	ENSMUST00000226525.2|Vmn1r77|ENSMUSG00000095864.3|vomeronasal 1 receptor 77	ENSMUST00000227320.2|Vmn1r77|ENSMUSG00000095864.3|vomeronasal 1 receptor 77
mm39_v1_chrX_-_158921370_158921431	0.614422	Emx1_Emx2	ENSMUST00000033662.9|Pdha1|ENSMUSG00000031299.11|pyruvate dehydrogenase E1 alpha 1
mm39_v1_chr4_+_118818775_118818809	0.610924	Emx1_Emx2	ENSMUST00000058651.5|Lao1|ENSMUSG00000024903.11|L-amino acid oxidase 1
mm39_v1_chr5_-_118382926_118383181	0.603798	Emx1_Emx2	ENSMUST00000117177.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000133372.2|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000154786.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2	ENSMUST00000121369.8|Rnft2|ENSMUSG00000032850.17|ring finger protein, transmembrane 2
mm39_v1_chr17_+_44337566_44337601	0.600344	Emx1_Emx2	ENSMUST00000229939.2|Rcan2|ENSMUSG00000039601.17|regulator of calcineurin 2
mm39_v1_chr19_-_33728759_33728759	0.598738	Emx1_Emx2	ENSMUST00000147153.4|Lipo2|ENSMUSG00000087303.4|lipase, member O2
mm39_v1_chr10_-_67748461_67748515	0.595346	Emx1_Emx2	ENSMUST00000064656.8|Zfp365|ENSMUSG00000037855.16|zinc finger protein 365
mm39_v1_chr4_-_4077510_4077541	0.592349	Emx1_Emx2	ENSMUST00000108383.2|Sdr16c6|ENSMUSG00000071019.12|short chain dehydrogenase/reductase family 16C, member 6
mm39_v1_chr6_+_114435480_114435480	0.582887	Emx1_Emx2	ENSMUST00000160780.2|Hrh1|ENSMUSG00000053004.10|histamine receptor H1
mm39_v1_chr19_+_44481901_44481920	0.568223	Emx1_Emx2	ENSMUST00000041163.5|Wnt8b|ENSMUSG00000036961.6|wingless-type MMTV integration site family, member 8B
mm39_v1_chr4_-_117622747_117622845	0.559822	Emx1_Emx2	ENSMUST00000062747.6|Klf17|ENSMUSG00000048626.6|Kruppel-like factor 17
mm39_v1_chr12_-_114186874_114186953	0.558072	Emx1_Emx2	ENSMUST00000103477.4|Ighv7-4|ENSMUSG00000076668.5|immunoglobulin heavy variable 7-4	ENSMUST00000192499.3|Ighv7-4|ENSMUSG00000076668.5|immunoglobulin heavy variable 7-4
mm39_v1_chr6_-_144155197_144155294	0.555496	Emx1_Emx2	ENSMUST00000038815.14|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000111749.8|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5	ENSMUST00000170367.9|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr2_+_151336197_151336224	0.553627	Emx1_Emx2	ENSMUST00000028949.16|Nsfl1c|ENSMUSG00000027455.17|NSFL1 (p97) cofactor (p47)	ENSMUST00000103160.5|Nsfl1c|ENSMUSG00000027455.17|NSFL1 (p97) cofactor (p47)
mm39_v1_chr12_+_37930305_37930340	0.548846	Emx1_Emx2	ENSMUST00000220990.2|Dgkb|ENSMUSG00000036095.12|diacylglycerol kinase, beta
mm39_v1_chrM_+_2743_2761	0.545545	Emx1_Emx2	ENSMUST00000082392.1|mt-Nd1|ENSMUSG00000064341.1|mitochondrially encoded NADH dehydrogenase 1
mm39_v1_chr12_+_80509869_80509974	0.538781	Emx1_Emx2	ENSMUST00000038185.10|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr3_+_127426783_127426789	0.537094	Emx1_Emx2	ENSMUST00000029587.9|Neurog2|ENSMUSG00000027967.9|neurogenin 2
mm39_v1_chr13_-_99653045_99653092	0.531662	Emx1_Emx2	ENSMUST00000064762.6|Map1b|ENSMUSG00000052727.7|microtubule-associated protein 1B
mm39_v1_chr1_+_88234454_88234481	0.52954	Emx1_Emx2	ENSMUST00000040210.14|Trpm8|ENSMUSG00000036251.17|transient receptor potential cation channel, subfamily M, member 8
mm39_v1_chr19_-_12313274_12313274	0.529431	Emx1_Emx2	ENSMUST00000208398.3|Olfr1438-ps1|ENSMUSG00000109328.3|olfactory receptor 1438, pseudogene 1
mm39_v1_chr13_+_19369097_19369151	0.528487	Emx1_Emx2	ENSMUST00000103554.5|Trgv4|ENSMUSG00000076745.5|T cell receptor gamma, variable 4
mm39_v1_chr7_-_103191924_103191924	0.527366	Emx1_Emx2	ENSMUST00000214269.3|Olfr612|ENSMUSG00000094119.4|olfactory receptor 612
mm39_v1_chr8_+_22329942_22329942	0.520499	Emx1_Emx2	ENSMUST00000006745.4|Defb2|ENSMUSG00000006570.4|defensin beta 2
mm39_v1_chr16_+_88525719_88525750	0.519127	Emx1_Emx2	ENSMUST00000060494.8|Krtap13-1|ENSMUSG00000056350.8|keratin associated protein 13-1
mm39_v1_chr16_-_65359406_65359533	0.501305	Emx1_Emx2	ENSMUST00000231259.2|Chmp2b|ENSMUSG00000004843.8|charged multivesicular body protein 2B
mm39_v1_chr6_+_124001527_124001527	0.500622	Emx1_Emx2	ENSMUST00000032238.5|Vmn2r26|ENSMUSG00000096630.3|vomeronasal 2, receptor 26
mm39_v1_chr2_-_155771938_155771988	0.499445	Emx1_Emx2	ENSMUST00000152766.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000139232.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000109632.8|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000006036.13|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000142655.2|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1	ENSMUST00000159238.2|Uqcc1|ENSMUSG00000005882.19|ubiquinol-cytochrome c reductase complex assembly factor 1
mm39_v1_chr3_-_75359125_75359125	0.489058	Emx1_Emx2	ENSMUST00000204341.3|Wdr49|ENSMUSG00000104301.4|WD repeat domain 49
mm39_v1_chr2_+_74552322_74552418	0.482662	Emx1_Emx2	ENSMUST00000047904.4|Hoxd4|ENSMUSG00000101174.9|homeobox D4
mm39_v1_chr12_-_11485639_11485654	0.477352	Emx1_Emx2	ENSMUST00000220506.2|Vsnl1|ENSMUSG00000054459.9|visinin-like 1
mm39_v1_chr6_-_144993362_144993387	0.476983	Emx1_Emx2	ENSMUST00000149769.6|Bcat1|ENSMUSG00000030268.18|branched chain aminotransferase 1, cytosolic
mm39_v1_chr17_+_37977879_37977879	0.47379	Emx1_Emx2	ENSMUST00000215811.2|Olfr118|ENSMUSG00000080990.3|olfactory receptor 118
mm39_v1_chr16_-_63684425_63684443	0.464912	Emx1_Emx2	ENSMUST00000232049.2|Epha3|ENSMUSG00000052504.8|Eph receptor A3
mm39_v1_chr10_-_40134104_40134155	0.464123	Emx1_Emx2	ENSMUST00000217141.2|Gtf3c6|ENSMUSG00000019837.9|general transcription factor IIIC, polypeptide 6, alpha
mm39_v1_chr6_-_144155167_144155195	0.454179	Emx1_Emx2	ENSMUST00000077160.12|Sox5|ENSMUSG00000041540.17|SRY (sex determining region Y)-box 5
mm39_v1_chr7_-_78432774_78432837	0.453942	Emx1_Emx2	ENSMUST00000032841.7|Mrpl46|ENSMUSG00000030612.7|mitochondrial ribosomal protein L46
mm39_v1_chr7_+_126575781_126576025	0.447895	Emx1_Emx2	ENSMUST00000206450.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	ENSMUST00000205830.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr4_+_126503611_126503689	0.44432	Emx1_Emx2	ENSMUST00000097886.4|5730409E04Rik|ENSMUSG00000073755.5|RIKEN cDNA 5730409E04Rik gene	ENSMUST00000164362.2|5730409E04Rik|ENSMUSG00000073755.5|RIKEN cDNA 5730409E04Rik gene
mm39_v1_chr14_+_65504067_65504142	0.441782	Emx1_Emx2	ENSMUST00000224629.2|Fbxo16|ENSMUSG00000034532.10|F-box protein 16
mm39_v1_chr4_+_150321142_150321224	0.43672	Emx1_Emx2	ENSMUST00000150175.8|Eno1|ENSMUSG00000063524.14|enolase 1, alpha non-neuron
mm39_v1_chr6_+_67532481_67532580	0.436247	Emx1_Emx2	ENSMUST00000103302.3|Igkv2-137|ENSMUSG00000076501.3|immunoglobulin kappa chain variable 2-137
mm39_v1_chr2_+_111144362_111144362	0.43337	Emx1_Emx2	ENSMUST00000219291.2|Olfr1280|ENSMUSG00000109449.4|olfactory receptor 1280
mm39_v1_chr2_-_148692834_148692861	0.430896	Emx1_Emx2	ENSMUST00000028937.3|Cstdc2|ENSMUSG00000027446.3|cystatin domain containing 2
mm39_v1_chr7_+_23752679_23752679	0.419751	Emx1_Emx2	ENSMUST00000236959.2|Vmn1r183|ENSMUSG00000118318.2|vomeronasal 1 receptor 183
mm39_v1_chr9_-_14411690_14411756	0.416486	Emx1_Emx2	ENSMUST00000115647.3|Kdm4d|ENSMUSG00000053914.10|lysine (K)-specific demethylase 4D
mm39_v1_chr2_+_113116075_113116095	0.416462	Emx1_Emx2	ENSMUST00000040856.3|Tmco5b|ENSMUSG00000041255.3|transmembrane and coiled-coil domains 5B
mm39_v1_chr12_+_87490666_87490716	0.415835	Emx1_Emx2	ENSMUST00000161023.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160488.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000077462.8|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein	ENSMUST00000160880.2|Slirp|ENSMUSG00000021040.16|SRA stem-loop interacting RNA binding protein
mm39_v1_chr14_+_53574579_53574579	0.415397	Emx1_Emx2	ENSMUST00000179580.3|Trav13n-3|ENSMUSG00000096038.3|T cell receptor alpha variable 13N-3
mm39_v1_chr6_+_41512010_41512032	0.414986	Emx1_Emx2	ENSMUST00000103288.2|Trbj1-5|ENSMUSG00000076487.2|T cell receptor beta joining 1-5
mm39_v1_chr6_-_144993451_144993579	0.413788	Emx1_Emx2	ENSMUST00000123930.8|Bcat1|ENSMUSG00000030268.18|branched chain aminotransferase 1, cytosolic
mm39_v1_chr13_-_120676749_120676749	0.413454	Emx1_Emx2	ENSMUST00000177561.2|Gm21762|ENSMUSG00000094027.3|predicted gene, 21762
mm39_v1_chr2_-_73410632_73410697	0.408693	Emx1_Emx2	ENSMUST00000028515.4|Chrna1|ENSMUSG00000027107.4|cholinergic receptor, nicotinic, alpha polypeptide 1 (muscle)
mm39_v1_chr2_-_90054837_90054837	0.408544	Emx1_Emx2	ENSMUST00000213994.3|Olfr1506|ENSMUSG00000075064.6|olfactory receptor 1506
mm39_v1_chr12_+_71021395_71021461	0.402477	Emx1_Emx2	ENSMUST00000160027.8|Psma3|ENSMUSG00000060073.10|proteasome subunit alpha 3	ENSMUST00000160864.8|Psma3|ENSMUSG00000060073.10|proteasome subunit alpha 3
mm39_v1_chr8_+_55053809_55053839	0.402475	Emx1_Emx2	ENSMUST00000033917.7|Spata4|ENSMUSG00000031518.7|spermatogenesis associated 4
mm39_v1_chr3_+_92864693_92864697	0.399822	Emx1_Emx2	ENSMUST00000059053.11|Lce3d|ENSMUSG00000043472.11|late cornified envelope 3D
mm39_v1_chr9_+_103917821_103917861	0.39837	Emx1_Emx2	ENSMUST00000216593.2|Nphp3|ENSMUSG00000032558.20|nephronophthisis 3 (adolescent)	ENSMUST00000147249.3|Gm28305|ENSMUSG00000101152.2|predicted gene 28305
mm39_v1_chrX_-_125723491_125723491	0.398271	Emx1_Emx2	ENSMUST00000081074.5|4932411N23Rik|ENSMUSG00000058670.6|RIKEN cDNA 4932411N23 gene
mm39_v1_chr6_+_134617903_134617977	0.397028	Emx1_Emx2	ENSMUST00000062755.10|Borcs5|ENSMUSG00000042992.16|BLOC-1 related complex subunit 5
mm39_v1_chr4_+_146033882_146033915	0.39694	Emx1_Emx2	ENSMUST00000105730.2|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987	ENSMUST00000091878.6|Zfp987|ENSMUSG00000066009.9|zinc finger protein 987
mm39_v1_chr4_+_126156118_126156173	0.395554	Emx1_Emx2	ENSMUST00000030660.9|Trappc3|ENSMUSG00000028847.9|trafficking protein particle complex 3
mm39_v1_chr13_+_55932369_55932381	0.393475	Emx1_Emx2	ENSMUST00000021961.12|Catsper3|ENSMUSG00000021499.13|cation channel, sperm associated 3
mm39_v1_chr1_-_84816379_84816461	0.392161	Emx1_Emx2	ENSMUST00000187818.2|Trip12|ENSMUSG00000026219.15|thyroid hormone receptor interactor 12
mm39_v1_chr7_-_29553079_29553107	0.385326	Emx1_Emx2	ENSMUST00000108223.8|Zfp940|ENSMUSG00000050855.17|zinc finger protein 940
mm39_v1_chr9_-_14411778_14411822	0.379562	Emx1_Emx2	ENSMUST00000058796.7|Kdm4d|ENSMUSG00000053914.10|lysine (K)-specific demethylase 4D
mm39_v1_chr14_+_25979825_25979825	0.37643	Emx1_Emx2	ENSMUST00000173580.8|Duxbl1|ENSMUSG00000048502.15|double homeobox B-like 1
mm39_v1_chr15_+_100320028_100320028	0.373167	Emx1_Emx2	ENSMUST00000132119.2|Gm5475|ENSMUSG00000087444.2|predicted gene 5475
mm39_v1_chr8_+_45960855_45960864	0.368892	Emx1_Emx2	ENSMUST00000141039.8|Sorbs2|ENSMUSG00000031626.19|sorbin and SH3 domain containing 2
mm39_v1_chr3_-_96359622_96359622	0.368024	Emx1_Emx2	ENSMUST00000093126.11|BC107364|ENSMUSG00000046317.15|cDNA sequence BC107364	ENSMUST00000098841.4|BC107364|ENSMUSG00000046317.15|cDNA sequence BC107364
mm39_v1_chr11_+_21041291_21041308	0.365553	Emx1_Emx2	ENSMUST00000093290.12|Peli1|ENSMUSG00000020134.14|pellino 1
mm39_v1_chr6_+_86986213_86986235	0.361787	Emx1_Emx2	ENSMUST00000120240.8|Nfu1|ENSMUSG00000029993.17|NFU1 iron-sulfur cluster scaffold
mm39_v1_chr7_+_107497109_107497109	0.341672	Emx1_Emx2	ENSMUST00000209670.4|Olfr472|ENSMUSG00000073893.7|olfactory receptor 472	ENSMUST00000216937.3|Olfr472|ENSMUSG00000073893.7|olfactory receptor 472
mm39_v1_chr19_+_26863281_26863325	0.339559	Emx1_Emx2	ENSMUST00000235850.2|Gm815|ENSMUSG00000074913.4|predicted gene 815	ENSMUST00000099536.4|Gm815|ENSMUSG00000074913.4|predicted gene 815
mm39_v1_chr10_-_128904846_128904846	0.337401	Emx1_Emx2	ENSMUST00000204515.3|Olfr766-ps1|ENSMUSG00000107748.5|olfactory receptor 766, pseudogene 1
mm39_v1_chr14_-_57371041_57371076	0.335167	Emx1_Emx2	ENSMUST00000039380.9|Gjb6|ENSMUSG00000040055.10|gap junction protein, beta 6
mm39_v1_chr2_+_36308959_36308959	0.325572	Emx1_Emx2	ENSMUST00000216645.2|Olfr339|ENSMUSG00000094464.3|olfactory receptor 339
mm39_v1_chr5_-_86345705_86345715	0.318086	Emx1_Emx2	ENSMUST00000094654.3|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor
mm39_v1_chr6_+_41511248_41511275	0.317885	Emx1_Emx2	ENSMUST00000192366.2|Trbj1-3|ENSMUSG00000076485.3|T cell receptor beta joining 1-3	ENSMUST00000103286.2|Trbj1-3|ENSMUSG00000076485.3|T cell receptor beta joining 1-3
mm39_v1_chr17_-_34563531_34563619	0.316327	Emx1_Emx2	ENSMUST00000235482.2|H2-Ea|ENSMUSG00000036322.12|histocompatibility 2, class II antigen E alpha
mm39_v1_chr7_-_104545159_104545159	0.314467	Emx1_Emx2	ENSMUST00000214757.2|Olfr666|ENSMUSG00000063582.3|olfactory receptor 666
mm39_v1_chr3_-_133250889_133250916	0.312246	Emx1_Emx2	ENSMUST00000197118.5|Tet2|ENSMUSG00000040943.13|tet methylcytosine dioxygenase 2
mm39_v1_chr13_+_23343482_23343482	0.312042	Emx1_Emx2	ENSMUST00000226845.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000228666.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219	ENSMUST00000227388.2|Vmn1r219|ENSMUSG00000061376.3|vomeronasal 1 receptor 219
mm39_v1_chr1_-_144052997_144053110	0.312018	Emx1_Emx2	ENSMUST00000111941.2|Rgs13|ENSMUSG00000051079.9|regulator of G-protein signaling 13	ENSMUST00000052375.8|Rgs13|ENSMUSG00000051079.9|regulator of G-protein signaling 13
mm39_v1_chrY_+_3774805_3774805	0.311233	Emx1_Emx2	ENSMUST00000180202.2|Gm3376|ENSMUSG00000096520.8|predicted gene 3376
mm39_v1_chrY_-_3303466_3303466	0.311233	Emx1_Emx2	ENSMUST00000179508.2|Gm21677|ENSMUSG00000093918.8|predicted gene, 21677
mm39_v1_chrY_-_3407067_3407067	0.311233	Emx1_Emx2	ENSMUST00000180310.2|Gm21708|ENSMUSG00000095948.8|predicted gene, 21708
mm39_v1_chr8_+_82499732_82499750	0.310676	Emx1_Emx2	ENSMUST00000170160.8|Inpp4b|ENSMUSG00000037940.18|inositol polyphosphate-4-phosphatase, type II
mm39_v1_chr4_+_88768324_88768324	0.310258	Emx1_Emx2	ENSMUST00000094972.2|Ifna1|ENSMUSG00000095498.2|interferon alpha 1
mm39_v1_chrX_+_158242121_158242189	0.309041	Emx1_Emx2	ENSMUST00000112470.3|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2	ENSMUST00000043151.12|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2	ENSMUST00000156172.3|Map7d2|ENSMUSG00000041020.15|MAP7 domain containing 2
mm39_v1_chr3_+_92899521_92899533	0.307437	Emx1_Emx2	ENSMUST00000090863.5|Lce3f|ENSMUSG00000068885.5|late cornified envelope 3F
mm39_v1_chr2_+_85904336_85904336	0.307388	Emx1_Emx2	ENSMUST00000164985.4|Olfr1036|ENSMUSG00000099820.3|olfactory receptor 1036
mm39_v1_chr16_-_19341016_19341016	0.307139	Emx1_Emx2	ENSMUST00000214315.2|Olfr167|ENSMUSG00000045341.3|olfactory receptor 167
mm39_v1_chr3_-_49711765_49711772	0.304843	Emx1_Emx2	ENSMUST00000035931.13|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr2_-_86882616_86882617	0.303646	Emx1_Emx2	ENSMUST00000213781.2|Olfr1106|ENSMUSG00000075164.3|olfactory receptor 1106	ENSMUST00000217650.2|Olfr1106|ENSMUSG00000075164.3|olfactory receptor 1106
mm39_v1_chr4_+_147576874_147576874	0.303389	Emx1_Emx2	ENSMUST00000105721.9|Zfp982|ENSMUSG00000078496.10|zinc finger protein 982
mm39_v1_chr14_-_17760477_17760535	0.301647	Emx1_Emx2	ENSMUST00000171305.2|Gm7876|ENSMUSG00000091700.8|predicted gene 7876	ENSMUST00000169465.8|Gm7876|ENSMUSG00000091700.8|predicted gene 7876
mm39_v1_chr11_+_58311921_58311948	0.300757	Emx1_Emx2	ENSMUST00000013797.3|1810065E05Rik|ENSMUSG00000013653.3|RIKEN cDNA 1810065E05 gene
mm39_v1_chr1_+_173924457_173924457	0.296068	Emx1_Emx2	ENSMUST00000213832.2|Olfr427|ENSMUSG00000059371.5|olfactory receptor 427
mm39_v1_chr18_+_57275854_57275868	0.294097	Emx1_Emx2	ENSMUST00000139892.2|Megf10|ENSMUSG00000024593.16|multiple EGF-like-domains 10
mm39_v1_chr12_-_111946560_111946600	0.292691	Emx1_Emx2	ENSMUST00000190680.2|Rd3l|ENSMUSG00000091402.8|retinal degeneration 3-like
mm39_v1_chr7_+_126575752_126575770	0.29173	Emx1_Emx2	ENSMUST00000206346.2|Cdipt|ENSMUSG00000030682.5|CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)
mm39_v1_chr10_-_107321938_107321995	0.283729	Emx1_Emx2	ENSMUST00000000445.2|Myf5|ENSMUSG00000000435.2|myogenic factor 5
mm39_v1_chr3_-_146200870_146200894	0.282414	Emx1_Emx2	ENSMUST00000093951.3|Spata1|ENSMUSG00000028188.14|spermatogenesis associated 1
mm39_v1_chr3_-_49711706_49711758	0.280609	Emx1_Emx2	ENSMUST00000191794.2|Pcdh18|ENSMUSG00000037892.14|protocadherin 18
mm39_v1_chr1_-_179527845_179527845	0.279383	Emx1_Emx2	ENSMUST00000223392.2|Kif28|ENSMUSG00000087236.4|kinesin family member 28
mm39_v1_chr9_-_73876182_73876281	0.278932	Emx1_Emx2	ENSMUST00000184666.8|Unc13c|ENSMUSG00000062151.14|unc-13 homolog C
mm39_v1_chr3_+_87524848_87524920	0.277977	Emx1_Emx2	ENSMUST00000039476.15|Arhgef11|ENSMUSG00000041977.19|Rho guanine nucleotide exchange factor (GEF) 11	ENSMUST00000129113.8|Arhgef11|ENSMUSG00000041977.19|Rho guanine nucleotide exchange factor (GEF) 11
mm39_v1_chr5_+_37204807_37204833	0.271848	Emx1_Emx2	ENSMUST00000137019.8|Jakmip1|ENSMUSG00000063646.19|janus kinase and microtubule interacting protein 1
mm39_v1_chr5_-_86345729_86345760	0.26965	Emx1_Emx2	ENSMUST00000031172.9|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor	ENSMUST00000113372.2|Gnrhr|ENSMUSG00000029255.9|gonadotropin releasing hormone receptor
mm39_v1_chr6_-_89825033_89825033	0.261344	Emx1_Emx2	ENSMUST00000226436.2|Vmn1r42|ENSMUSG00000068232.4|vomeronasal 1 receptor 42
mm39_v1_chr4_+_145237329_145237361	0.258877	Emx1_Emx2	ENSMUST00000105742.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990	ENSMUST00000136309.8|Zfp990|ENSMUSG00000078503.10|zinc finger protein 990
mm39_v1_chr7_+_102790086_102790086	0.257746	Emx1_Emx2	ENSMUST00000118682.3|Olfr588-ps1|ENSMUSG00000084262.6|olfactory receptor 588, pseudogene 1
mm39_v1_chr4_+_146093394_146093394	0.253402	Emx1_Emx2	ENSMUST00000168483.9|Zfp600|ENSMUSG00000066007.16|zinc finger protein 600
mm39_v1_chr1_-_157084252_157084272	0.253365	Emx1_Emx2	ENSMUST00000134543.8|Rasal2|ENSMUSG00000070565.12|RAS protein activator like 2
mm39_v1_chr14_+_53562089_53562089	0.251134	Emx1_Emx2	ENSMUST00000178100.3|Trav7n-6|ENSMUSG00000105080.2|T cell receptor alpha variable 7N-6
mm39_v1_chr7_+_78432867_78432867	0.250916	Emx1_Emx2	ENSMUST00000032840.5|Mrps11|ENSMUSG00000030611.11|mitochondrial ribosomal protein S11
mm39_v1_chrX_-_104918911_104919032	0.247988	Emx1_Emx2	ENSMUST00000200471.2|Atrx|ENSMUSG00000031229.17|ATRX, chromatin remodeler
mm39_v1_chr2_-_89678487_89678487	0.247905	Emx1_Emx2	ENSMUST00000214428.3|Olfr48|ENSMUSG00000075072.4|olfactory receptor 48
mm39_v1_chr18_-_34712123_34712183	0.247618	Emx1_Emx2	ENSMUST00000079287.12|Nme5|ENSMUSG00000035984.15|NME/NM23 family member 5
mm39_v1_chr7_-_103191732_103191732	0.24573	Emx1_Emx2	ENSMUST00000215663.2|Olfr612|ENSMUSG00000094119.4|olfactory receptor 612
mm39_v1_chr4_-_146993984_146994047	0.243612	Emx1_Emx2	ENSMUST00000238583.2|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411	ENSMUST00000049821.4|Gm21411|ENSMUSG00000045699.5|predicted gene, 21411
mm39_v1_chr1_-_37535202_37535242	0.242259	Emx1_Emx2	ENSMUST00000143636.8|Mgat4a|ENSMUSG00000026110.16|mannoside acetylglucosaminyltransferase 4, isoenzyme A
mm39_v1_chr14_+_7030760_7030788	0.235098	Emx1_Emx2	ENSMUST00000055211.6|Lrrc3b|ENSMUSG00000045201.7|leucine rich repeat containing 3B
mm39_v1_chr3_-_37180093_37180110	0.234959	Emx1_Emx2	ENSMUST00000029275.6|Il2|ENSMUSG00000027720.8|interleukin 2
mm39_v1_chr10_-_128918779_128918779	0.232852	Emx1_Emx2	ENSMUST00000213579.2|Olfr767|ENSMUSG00000059762.5|olfactory receptor 767
mm39_v1_chr18_-_9282754_9282809	0.232721	Emx1_Emx2	ENSMUST00000041007.4|Gjd4|ENSMUSG00000036855.4|gap junction protein, delta 4
mm39_v1_chr6_-_58884038_58884083	0.230957	Emx1_Emx2	ENSMUST00000059539.5|Nap1l5|ENSMUSG00000055430.5|nucleosome assembly protein 1-like 5
mm39_v1_chr6_+_24528143_24528199	0.229964	Emx1_Emx2	ENSMUST00000031696.10|Asb15|ENSMUSG00000029685.16|ankyrin repeat and SOCS box-containing 15
mm39_v1_chr14_+_48683797_48683886	0.229152	Emx1_Emx2	ENSMUST00000111735.10|Tmem260|ENSMUSG00000036339.19|transmembrane protein 260
mm39_v1_chr11_+_50857357_50857357	0.226282	Emx1_Emx2	ENSMUST00000213259.2|Olfr1378|ENSMUSG00000050343.3|olfactory receptor 1378
mm39_v1_chr8_+_31579633_31579785	0.224127	Emx1_Emx2	ENSMUST00000170204.8|Dusp26|ENSMUSG00000039661.15|dual specificity phosphatase 26 (putative)
mm39_v1_chr6_+_57133904_57133905	0.2213	Emx1_Emx2	ENSMUST00000226866.2|Vmn1r12|ENSMUSG00000057981.6|vomeronasal 1 receptor 12	ENSMUST00000227581.2|Vmn1r12|ENSMUSG00000057981.6|vomeronasal 1 receptor 12
mm39_v1_chr12_+_37930169_37930179	0.21711	Emx1_Emx2	ENSMUST00000221176.2|Dgkb|ENSMUSG00000036095.12|diacylglycerol kinase, beta
mm39_v1_chr7_-_11414074_11414074	0.217091	Emx1_Emx2	ENSMUST00000227010.2|Vmn1r72|ENSMUSG00000095430.4|vomeronasal 1 receptor 72	ENSMUST00000209638.3|Vmn1r72|ENSMUSG00000095430.4|vomeronasal 1 receptor 72
mm39_v1_chr3_-_63758672_63758780	0.210803	Emx1_Emx2	ENSMUST00000162269.9|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1	ENSMUST00000159676.9|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1	ENSMUST00000175947.8|Plch1|ENSMUSG00000036834.17|phospholipase C, eta 1
mm39_v1_chr11_+_73489420_73489420	0.203458	Emx1_Emx2	ENSMUST00000214228.2|Olfr384|ENSMUSG00000060335.3|olfactory receptor 384
mm39_v1_chr12_+_80509978_80510031	0.203117	Emx1_Emx2	ENSMUST00000219272.2|Exd2|ENSMUSG00000032705.10|exonuclease 3'-5' domain containing 2
mm39_v1_chr7_+_106630381_106630381	0.200518	Emx1_Emx2	ENSMUST00000213623.2|Olfr713|ENSMUSG00000073898.4|olfactory receptor 713
mm39_v1_chr4_+_147106307_147106307	0.199437	Emx1_Emx2	ENSMUST00000075775.6|Rex2|ENSMUSG00000067919.9|reduced expression 2
mm39_v1_chr1_-_173948728_173948728	0.197647	Emx1_Emx2	ENSMUST00000214446.2|Olfr231|ENSMUSG00000046486.5|olfactory receptor 231
mm39_v1_chr2_+_68490186_68490186	0.197234	Emx1_Emx2	ENSMUST00000055930.6|4932414N04Rik|ENSMUSG00000079324.12|RIKEN cDNA 4932414N04 gene
mm39_v1_chr2_-_37249208_37249242	0.191084	Emx1_Emx2	ENSMUST00000147703.3|Pdcl|ENSMUSG00000009030.15|phosducin-like
mm39_v1_chr7_+_130936227_130936268	0.189935	Emx1_Emx2	ENSMUST00000207784.2|Fam24a|ENSMUSG00000030859.9|family with sequence similarity 24, member A
mm39_v1_chr16_-_69660606_69660632	0.187662	Emx1_Emx2	ENSMUST00000076500.14|Speer2|ENSMUSG00000063163.14|spermatogenesis associated glutamate (E)-rich protein 2
mm39_v1_chr4_+_41966058_41966058	0.186207	Emx1_Emx2	ENSMUST00000108026.3|Fam205a4|ENSMUSG00000078746.3|family with sequence similarity 205, member A4
mm39_v1_chr14_-_44239726_44239726	0.183811	Emx1_Emx2	ENSMUST00000096869.3|Ang6|ENSMUSG00000072598.4|angiogenin, ribonuclease A family, member 6
mm39_v1_chr5_-_87847268_87847286	0.182074	Emx1_Emx2	ENSMUST00000196869.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000199624.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000198057.5|Csn2|ENSMUSG00000063157.10|casein beta	ENSMUST00000082370.10|Csn2|ENSMUSG00000063157.10|casein beta
mm39_v1_chr7_+_24335969_24335989	0.175687	Emx1_Emx2	ENSMUST00000080718.6|Lypd3|ENSMUSG00000057454.6|Ly6/Plaur domain containing 3
mm39_v1_chr16_-_45352346_45352413	0.175184	Emx1_Emx2	ENSMUST00000232600.2|Gm17783|ENSMUSG00000116542.2|predicted gene, 17783
mm39_v1_chr3_-_151455514_151455597	0.173626	Emx1_Emx2	ENSMUST00000029671.9|Ifi44|ENSMUSG00000028037.14|interferon-induced protein 44
mm39_v1_chr1_+_40125145_40125254	0.171848	Emx1_Emx2	ENSMUST00000194913.2|Il1r2|ENSMUSG00000026073.14|interleukin 1 receptor, type II
mm39_v1_chr7_+_6048160_6048268	0.169397	Emx1_Emx2	ENSMUST00000037728.13|Nlrp4c|ENSMUSG00000034690.14|NLR family, pyrin domain containing 4C	ENSMUST00000121583.2|Nlrp4c|ENSMUSG00000034690.14|NLR family, pyrin domain containing 4C
mm39_v1_chr9_+_51027300_51027306	0.168719	Emx1_Emx2	ENSMUST00000114431.4|Btg4|ENSMUSG00000032056.11|BTG anti-proliferation factor 4	ENSMUST00000213117.2|Btg4|ENSMUSG00000032056.11|BTG anti-proliferation factor 4
mm39_v1_chr6_+_66873381_66873533	0.163971	Emx1_Emx2	ENSMUST00000043148.13|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114228.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114227.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114226.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000204511.3|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114225.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114224.8|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12	ENSMUST00000114222.4|Gng12|ENSMUSG00000036402.14|guanine nucleotide binding protein (G protein), gamma 12
mm39_v1_chr4_+_147056433_147056433	0.162413	Emx1_Emx2	ENSMUST00000146688.3|Zfp989|ENSMUSG00000086147.3|zinc finger protein 989
mm39_v1_chr7_+_102611867_102611867	0.160802	Emx1_Emx2	ENSMUST00000098213.8|Olfr576|ENSMUSG00000073962.10|olfactory receptor 576
mm39_v1_chr7_+_26456567_26456596	0.155359	Emx1_Emx2	ENSMUST00000077855.8|Cyp2b19|ENSMUSG00000066704.7|cytochrome P450, family 2, subfamily b, polypeptide 19
mm39_v1_chr4_-_147787010_147787010	0.154677	Emx1_Emx2	ENSMUST00000117638.2|Zfp534|ENSMUSG00000062518.8|zinc finger protein 534
mm39_v1_chr4_+_145397238_145397255	0.152536	Emx1_Emx2	ENSMUST00000105738.9|Zfp980|ENSMUSG00000058186.14|zinc finger protein 980
mm39_v1_chr2_+_85876205_85876205	0.144826	Emx1_Emx2	ENSMUST00000213496.2|Olfr1034|ENSMUSG00000102091.3|olfactory receptor 1034
mm39_v1_chr2_+_151336095_151336150	0.143862	Emx1_Emx2	ENSMUST00000089140.13|Nsfl1c|ENSMUSG00000027455.17|NSFL1 (p97) cofactor (p47)
mm39_v1_chr4_+_147390131_147390131	0.14237	Emx1_Emx2	ENSMUST00000148762.4|Zfp988|ENSMUSG00000078498.6|zinc finger protein 988
mm39_v1_chr17_+_18372149_18372149	0.14122	Emx1_Emx2	ENSMUST00000169686.3|Vmn2r92|ENSMUSG00000091350.3|vomeronasal 2, receptor 92
mm39_v1_chr8_+_72860884_72860884	0.140702	Emx1_Emx2	ENSMUST00000210435.4|Olfr374|ENSMUSG00000046881.8|olfactory receptor 374
mm39_v1_chr11_-_99176086_99176090	0.140682	Emx1_Emx2	ENSMUST00000017255.4|Krt24|ENSMUSG00000020913.4|keratin 24
mm39_v1_chr9_+_20193647_20193647	0.136248	Emx1_Emx2	ENSMUST00000071725.4|Olfr39|ENSMUSG00000059623.7|olfactory receptor 39	ENSMUST00000212983.3|Olfr39|ENSMUSG00000059623.7|olfactory receptor 39
mm39_v1_chr8_+_31579499_31579617	0.132549	Emx1_Emx2	ENSMUST00000036631.14|Dusp26|ENSMUSG00000039661.15|dual specificity phosphatase 26 (putative)
mm39_v1_chr4_-_155729865_155729865	0.131611	Emx1_Emx2	ENSMUST00000115821.3|Gm10563|ENSMUSG00000073682.4|predicted gene 10563
mm39_v1_chr6_+_43083303_43083303	0.13133	Emx1_Emx2	ENSMUST00000213649.2|Olfr441|ENSMUSG00000094669.4|olfactory receptor 441
mm39_v1_chr4_+_146098479_146098479	0.130512	Emx1_Emx2	ENSMUST00000131932.2|Zfp600|ENSMUSG00000066007.16|zinc finger protein 600
mm39_v1_chrX_+_56257374_56257514	0.125886	Emx1_Emx2	ENSMUST00000033466.2|Cd40lg|ENSMUSG00000031132.2|CD40 ligand
mm39_v1_chr3_+_89269282_89269282	0.125102	Emx1_Emx2	ENSMUST00000208216.2|Dcst2|ENSMUSG00000109293.2|DC-STAMP domain containing 2
mm39_v1_chr4_+_147445744_147445768	0.122911	Emx1_Emx2	ENSMUST00000133078.8|Zfp978|ENSMUSG00000078497.10|zinc finger protein 978	ENSMUST00000154154.2|Zfp978|ENSMUSG00000078497.10|zinc finger protein 978
mm39_v1_chr2_-_86317730_86317730	0.11883	Emx1_Emx2	ENSMUST00000217292.3|Olfr228|ENSMUSG00000111772.3|olfactory receptor 228
mm39_v1_chrY_+_52778041_52778041	0.112459	Emx1_Emx2	ENSMUST00000178673.2|Gm21258|ENSMUSG00000095606.8|predicted gene, 21258
mm39_v1_chr5_+_95254797_95254797	0.110861	Emx1_Emx2	ENSMUST00000163216.2|Pramel45|ENSMUSG00000092166.3|PRAME like 45
mm39_v1_chr1_-_86039692_86039707	0.109887	Emx1_Emx2	ENSMUST00000027431.7|Htr2b|ENSMUSG00000026228.7|5-hydroxytryptamine (serotonin) receptor 2B
mm39_v1_chr4_+_56743407_56743439	0.10817	Emx1_Emx2	ENSMUST00000095079.6|Actl7a|ENSMUSG00000070979.6|actin-like 7a
mm39_v1_chr7_+_108019628_108019628	0.107112	Emx1_Emx2	ENSMUST00000213521.3|Olfr497|ENSMUSG00000095239.5|olfactory receptor 497
mm39_v1_chr6_+_37847721_37847892	0.106321	Emx1_Emx2	ENSMUST00000031859.14|Trim24|ENSMUSG00000029833.18|tripartite motif-containing 24	ENSMUST00000120428.8|Trim24|ENSMUSG00000029833.18|tripartite motif-containing 24
mm39_v1_chr10_+_101994719_101994750	0.102751	Emx1_Emx2	ENSMUST00000138522.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000163753.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C	ENSMUST00000138016.8|Mgat4c|ENSMUSG00000019888.17|MGAT4 family, member C
mm39_v1_chr7_-_107813843_107813843	0.101365	Emx1_Emx2	ENSMUST00000216489.2|Olfr487|ENSMUSG00000095929.3|olfactory receptor 487
mm39_v1_chr11_-_79853200_79853225	0.101173	Emx1_Emx2	ENSMUST00000108241.8|Utp6|ENSMUSG00000035575.12|UTP6 small subunit processome component	ENSMUST00000043152.6|Utp6|ENSMUSG00000035575.12|UTP6 small subunit processome component
mm39_v1_chr6_+_40419797_40419871	0.100126	Emx1_Emx2	ENSMUST00000038907.9|Wee2|ENSMUSG00000037159.12|WEE1 homolog 2 (S. pombe)	ENSMUST00000141490.2|Wee2|ENSMUSG00000037159.12|WEE1 homolog 2 (S. pombe)
mm39_v1_chr14_+_69585036_69585036	0.0966557	Emx1_Emx2	ENSMUST00000064831.6|Entpd4|ENSMUSG00000095463.9|ectonucleoside triphosphate diphosphohydrolase 4
mm39_v1_chr2_+_36456674_36456674	0.0959446	Emx1_Emx2	ENSMUST00000215879.2|Olfr344|ENSMUSG00000096822.3|olfactory receptor 344
mm39_v1_chrX_+_122256461_122256461	0.0943751	Emx1_Emx2	ENSMUST00000238410.2|Gm2411|ENSMUSG00000118415.2|predicted gene 2411
mm39_v1_chr17_+_37274714_37274729	0.092918	Emx1_Emx2	ENSMUST00000209623.2|Polr1has|ENSMUSG00000036214.15|RNA polymerase I subunit H, antisense
mm39_v1_chr11_+_94858417_94858439	0.0836136	Emx1_Emx2	ENSMUST00000038928.7|H1f9|ENSMUSG00000038994.7|H1.9 linker histone
mm39_v1_chr12_+_111937978_111938034	0.0828331	Emx1_Emx2	ENSMUST00000079009.11|Tdrd9|ENSMUSG00000054003.14|tudor domain containing 9
mm39_v1_chr7_+_28510310_28510346	0.0817822	Emx1_Emx2	ENSMUST00000038572.15|Hnrnpl|ENSMUSG00000015165.17|heterogeneous nuclear ribonucleoprotein L
mm39_v1_chr1_-_174749379_174749393	0.0816657	Emx1_Emx2	ENSMUST00000055294.4|Grem2|ENSMUSG00000050069.4|gremlin 2, DAN family BMP antagonist
mm39_v1_chr1_+_179788037_179788150	0.0778187	Emx1_Emx2	ENSMUST00000097453.9|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha	ENSMUST00000111117.8|Cdc42bpa|ENSMUSG00000026490.19|CDC42 binding protein kinase alpha
mm39_v1_chr9_+_39556381_39556381	0.0747374	Emx1_Emx2	ENSMUST00000219295.2|Olfr961|ENSMUSG00000059106.6|olfactory receptor 961
mm39_v1_chr12_-_84031622_84031632	0.0737669	Emx1_Emx2	ENSMUST00000164935.3|Heatr4|ENSMUSG00000090843.3|HEAT repeat containing 4
mm39_v1_chr11_-_58521327_58521327	0.0735016	Emx1_Emx2	ENSMUST00000214132.2|Olfr323|ENSMUSG00000043880.6|olfactory receptor 323
mm39_v1_chr6_+_17749169_17749266	0.0716391	Emx1_Emx2	ENSMUST00000053148.14|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7	ENSMUST00000115417.4|St7|ENSMUSG00000029534.18|suppression of tumorigenicity 7
mm39_v1_chr10_+_112001581_112001581	0.0698357	Emx1_Emx2	ENSMUST00000170013.2|Caps2|ENSMUSG00000035694.16|calcyphosphine 2
mm39_v1_chr6_+_57086439_57086439	0.0675142	Emx1_Emx2	ENSMUST00000228270.2|Vmn1r10|ENSMUSG00000115181.2|vomeronasal 1 receptor 10
mm39_v1_chrX_+_122925694_122925694	0.0629277	Emx1_Emx2	ENSMUST00000238503.2|Gm5945|ENSMUSG00000118483.2|predicted gene 5945
mm39_v1_chr12_-_114793177_114793369	0.0614662	Emx1_Emx2	ENSMUST00000103511.2|Ighv1-31|ENSMUSG00000096649.3|immunoglobulin heavy variable 1-31	ENSMUST00000195735.2|Ighv1-31|ENSMUSG00000096649.3|immunoglobulin heavy variable 1-31
mm39_v1_chr2_+_111355548_111355548	0.0585958	Emx1_Emx2	ENSMUST00000217845.3|Olfr1293-ps|ENSMUSG00000108908.5|olfactory receptor 1293, pseudogene
mm39_v1_chr9_+_39903409_39903409	0.0585854	Emx1_Emx2	ENSMUST00000217600.2|Olfr978|ENSMUSG00000044292.5|olfactory receptor 978
mm39_v1_chr2_+_88479038_88479038	0.0569443	Emx1_Emx2	ENSMUST00000120518.4|Olfr1192-ps1|ENSMUSG00000111590.3|olfactory receptor 1192, pseudogene 1
mm39_v1_chr10_-_49659355_49659634	0.056505	Emx1_Emx2	ENSMUST00000105484.10|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)	ENSMUST00000218598.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)	ENSMUST00000079751.9|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)	ENSMUST00000218441.2|Grik2|ENSMUSG00000056073.17|glutamate receptor, ionotropic, kainate 2 (beta 2)
mm39_v1_chrY_+_2904133_2904133	0.0531336	Emx1_Emx2	ENSMUST00000166474.3|Gm10352|ENSMUSG00000091987.9|predicted gene 10352
mm39_v1_chr4_+_147637714_147637796	0.0498938	Emx1_Emx2	ENSMUST00000139784.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000143885.8|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985	ENSMUST00000081742.7|Zfp985|ENSMUSG00000065999.14|zinc finger protein 985
mm39_v1_chr7_-_79443536_79443536	0.0486594	Emx1_Emx2	ENSMUST00000032760.6|Mesp1|ENSMUSG00000030544.6|mesoderm posterior 1
mm39_v1_chrX_-_133012600_133012622	0.0484766	Emx1_Emx2	ENSMUST00000033610.13|Nox1|ENSMUSG00000031257.15|NADPH oxidase 1
mm39_v1_chr4_-_150085722_150085762	0.0461342	Emx1_Emx2	ENSMUST00000153394.2|H6pd|ENSMUSG00000028980.15|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm39_v1_chr12_-_114843941_114843997	0.0444962	Emx1_Emx2	ENSMUST00000191862.6|Ighv1-36|ENSMUSG00000094051.7|immunoglobulin heavy variable 1-36	ENSMUST00000103513.3|Ighv1-36|ENSMUSG00000094051.7|immunoglobulin heavy variable 1-36
mm39_v1_chr17_+_47083561_47083561	0.0442707	Emx1_Emx2	ENSMUST00000071430.7|2310039H08Rik|ENSMUSG00000062619.7|RIKEN cDNA 2310039H08 gene
mm39_v1_chr16_+_58967409_58967409	0.0416488	Emx1_Emx2	ENSMUST00000216957.3|Olfr195|ENSMUSG00000062608.6|olfactory receptor 195
mm39_v1_chr1_+_163607143_163607157	0.0377853	Emx1_Emx2	ENSMUST00000077642.12|Kifap3|ENSMUSG00000026585.14|kinesin-associated protein 3	ENSMUST00000027877.7|Kifap3|ENSMUSG00000026585.14|kinesin-associated protein 3
mm39_v1_chr9_+_39077606_39077606	0.0355094	Emx1_Emx2	ENSMUST00000071617.6|Olfr943|ENSMUSG00000094970.4|olfactory receptor 943	ENSMUST00000213830.3|Olfr943|ENSMUSG00000094970.4|olfactory receptor 943	ENSMUST00000215770.3|Olfr943|ENSMUSG00000094970.4|olfactory receptor 943	ENSMUST00000213176.3|Olfr943|ENSMUSG00000094970.4|olfactory receptor 943
mm39_v1_chr10_+_78816884_78816949	0.0320076	Emx1_Emx2	ENSMUST00000058991.5|Olfr1352|ENSMUSG00000046493.6|olfactory receptor 1352	ENSMUST00000203973.2|Olfr1352|ENSMUSG00000046493.6|olfactory receptor 1352
mm39_v1_chr16_-_59138611_59138611	0.0316519	Emx1_Emx2	ENSMUST00000216261.2|Olfr204|ENSMUSG00000095928.4|olfactory receptor 204
mm39_v1_chr2_+_87137925_87137925	0.0237601	Emx1_Emx2	ENSMUST00000216396.3|Olfr1118|ENSMUSG00000083706.4|olfactory receptor 1118
mm39_v1_chr7_-_85986774_85986794	0.020484	Emx1_Emx2	ENSMUST00000213705.2|Olfr307|ENSMUSG00000055610.6|olfactory receptor 307	ENSMUST00000217494.2|Olfr307|ENSMUSG00000055610.6|olfactory receptor 307
mm39_v1_chr11_+_73851643_73851643	0.0199507	Emx1_Emx2	ENSMUST00000213134.2|Olfr397|ENSMUSG00000057050.8|olfactory receptor 397	ENSMUST00000216291.2|Olfr397|ENSMUSG00000057050.8|olfactory receptor 397
mm39_v1_chrX_+_151922936_151923006	0.0151702	Emx1_Emx2	ENSMUST00000039720.11|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B	ENSMUST00000144175.3|Rragb|ENSMUSG00000041658.13|Ras-related GTP binding B
mm39_v1_chr18_+_37488174_37488324	0.0136873	Emx1_Emx2	ENSMUST00000192867.2|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8	ENSMUST00000051163.3|Pcdhb8|ENSMUSG00000045876.5|protocadherin beta 8
mm39_v1_chr3_+_106020545_106020706	0.0119179	Emx1_Emx2	ENSMUST00000079132.12|Chia1|ENSMUSG00000062778.13|chitinase, acidic 1	ENSMUST00000139086.2|Chia1|ENSMUSG00000062778.13|chitinase, acidic 1
mm39_v1_chr2_-_89195205_89195209	0.00836793	Emx1_Emx2	ENSMUST00000111543.2|Olfr1234|ENSMUSG00000075090.5|olfactory receptor 1234	ENSMUST00000137692.3|Olfr1234|ENSMUSG00000075090.5|olfactory receptor 1234
mm39_v1_chr4_+_102446883_102447040	0.00811455	Emx1_Emx2	ENSMUST00000097949.11|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific	ENSMUST00000106901.2|Pde4b|ENSMUSG00000028525.17|phosphodiesterase 4B, cAMP specific
mm39_v1_chr4_-_102883905_102884039	0.00802693	Emx1_Emx2	ENSMUST00000084382.6|Insl5|ENSMUSG00000066090.6|insulin-like 5	ENSMUST00000106869.3|Insl5|ENSMUSG00000066090.6|insulin-like 5
mm39_v1_chr6_-_13871475_13871517	0.0023727	Emx1_Emx2	ENSMUST00000139231.2|2610001J05Rik|ENSMUSG00000052419.8|RIKEN cDNA 2610001J05 gene
mm39_v1_chr4_+_52596266_52596278	0.00227457	Emx1_Emx2	ENSMUST00000029995.6|Toporsl|ENSMUSG00000028314.7|topoisomerase I binding, arginine/serine-rich like
mm39_v1_chr2_-_86257093_86257093	0.00117696	Emx1_Emx2	ENSMUST00000217481.2|Olfr1062|ENSMUSG00000090059.5|olfactory receptor 1062
mm39_v1_chr3_+_32490300_32490300	0.000143597	Emx1_Emx2	ENSMUST00000029201.14|Pik3ca|ENSMUSG00000027665.14|phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
