mm39_v1_chr5_-_22549688_22549708	1.97613	Clock	ENSMUST00000062372.14|Reln|ENSMUSG00000042453.15|reelin	ENSMUST00000161356.8|Reln|ENSMUSG00000042453.15|reelin
mm39_v1_chrX_+_8137372_8137418	1.97568	Clock	ENSMUST00000127103.8|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5	ENSMUST00000115591.8|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5
mm39_v1_chr1_+_59724108_59724182	1.89716	Clock	ENSMUST00000027174.10|Nop58|ENSMUSG00000026020.10|NOP58 ribonucleoprotein	ENSMUST00000190231.7|Nop58|ENSMUSG00000026020.10|NOP58 ribonucleoprotein	ENSMUST00000191142.7|Nop58|ENSMUSG00000026020.10|NOP58 ribonucleoprotein	ENSMUST00000185772.7|Nop58|ENSMUSG00000026020.10|NOP58 ribonucleoprotein
mm39_v1_chr2_+_164611812_164611823	1.79372	Clock	ENSMUST00000088248.13|Ube2c|ENSMUSG00000001403.14|ubiquitin-conjugating enzyme E2C	ENSMUST00000001439.7|Ube2c|ENSMUSG00000001403.14|ubiquitin-conjugating enzyme E2C
mm39_v1_chrX_+_8137620_8137692	1.74971	Clock	ENSMUST00000033512.11|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5
mm39_v1_chr15_+_103148824_103148921	1.71374	Clock	ENSMUST00000036004.16|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000087351.9|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1	ENSMUST00000231141.2|Hnrnpa1|ENSMUSG00000046434.17|heterogeneous nuclear ribonucleoprotein A1
mm39_v1_chr2_+_160487801_160487816	1.68078	Clock	ENSMUST00000109468.3|Top1|ENSMUSG00000070544.7|topoisomerase (DNA) I
mm39_v1_chrX_+_8137881_8138029	1.66373	Clock	ENSMUST00000115590.2|Slc38a5|ENSMUSG00000031170.15|solute carrier family 38, member 5
mm39_v1_chr4_+_123176570_123176704	1.63533	Clock	ENSMUST00000106243.8|Pabpc4|ENSMUSG00000011257.20|poly(A) binding protein, cytoplasmic 4	ENSMUST00000106241.8|Pabpc4|ENSMUSG00000011257.20|poly(A) binding protein, cytoplasmic 4	ENSMUST00000080178.13|Pabpc4|ENSMUSG00000011257.20|poly(A) binding protein, cytoplasmic 4
mm39_v1_chr18_+_35686424_35686475	1.56906	Clock	ENSMUST00000235679.2|Snhg4|ENSMUSG00000117869.2|small nucleolar RNA host gene 4	ENSMUST00000235176.2|Snhg4|ENSMUSG00000117694.2|small nucleolar RNA host gene 4	ENSMUST00000235801.2|Snhg4|ENSMUSG00000117694.2|small nucleolar RNA host gene 4	ENSMUST00000237592.2|Snhg4|ENSMUSG00000117694.2|small nucleolar RNA host gene 4	ENSMUST00000237230.2|Snhg4|ENSMUSG00000117694.2|small nucleolar RNA host gene 4	ENSMUST00000237589.2|Snhg4|ENSMUSG00000117694.2|small nucleolar RNA host gene 4
mm39_v1_chr3_+_51131868_51131899	1.44069	Clock	ENSMUST00000023849.15|Noct|ENSMUSG00000023087.16|nocturnin	ENSMUST00000167780.2|Noct|ENSMUSG00000023087.16|nocturnin
mm39_v1_chr4_-_131802561_131802603	1.25338	Clock	ENSMUST00000105970.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1	ENSMUST00000105975.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr4_-_131802606_131802652	1.16916	Clock	ENSMUST00000146021.8|Epb41|ENSMUSG00000028906.18|erythrocyte membrane protein band 4.1
mm39_v1_chr11_+_68986043_68986115	1.16239	Clock	ENSMUST00000101004.9|Per1|ENSMUSG00000020893.18|period circadian clock 1
mm39_v1_chr18_+_42644552_42644586	1.13325	Clock	ENSMUST00000237602.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000236088.2|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)	ENSMUST00000025375.15|Tcerg1|ENSMUSG00000024498.17|transcription elongation regulator 1 (CA150)
mm39_v1_chr11_+_101207743_101207803	1.12331	Clock	ENSMUST00000151385.2|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr6_-_49191891_49191959	1.10593	Clock	ENSMUST00000031838.9|Igf2bp3|ENSMUSG00000029814.11|insulin-like growth factor 2 mRNA binding protein 3
mm39_v1_chr1_+_172327812_172327852	1.02159	Clock	ENSMUST00000192460.2|Tagln2|ENSMUSG00000026547.16|transgelin 2
mm39_v1_chr1_-_86286690_86286774	0.973137	Clock	ENSMUST00000185785.2|Ncl|ENSMUSG00000026234.13|nucleolin
mm39_v1_chr11_-_106679983_106680018	0.960788	Clock	ENSMUST00000129585.8|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chr17_+_43327412_43327482	0.956512	Clock	ENSMUST00000024708.6|Tnfrsf21|ENSMUSG00000023915.6|tumor necrosis factor receptor superfamily, member 21
mm39_v1_chr1_-_153208477_153208566	0.941905	Clock	ENSMUST00000027752.15|Lamc1|ENSMUSG00000026478.15|laminin, gamma 1
mm39_v1_chr5_-_77099406_77099436	0.940736	Clock	ENSMUST00000140076.2|Ppat|ENSMUSG00000029246.15|phosphoribosyl pyrophosphate amidotransferase
mm39_v1_chr5_+_146168020_146168195	0.926516	Clock	ENSMUST00000161181.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000161652.8|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000031640.15|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8	ENSMUST00000159467.2|Cdk8|ENSMUSG00000029635.16|cyclin-dependent kinase 8
mm39_v1_chr13_-_12355604_12355641	0.918082	Clock	ENSMUST00000168193.8|Actn2|ENSMUSG00000052374.17|actinin alpha 2	ENSMUST00000064204.14|Actn2|ENSMUSG00000052374.17|actinin alpha 2
mm39_v1_chr1_+_172328768_172328824	0.914468	Clock	ENSMUST00000111228.2|Tagln2|ENSMUSG00000026547.16|transgelin 2
mm39_v1_chr19_+_9995557_9995597	0.89996	Clock	ENSMUST00000113161.10|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1	ENSMUST00000238672.2|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1	ENSMUST00000117641.8|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1
mm39_v1_chr17_+_35220252_35220324	0.877729	Clock	ENSMUST00000174260.8|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr11_+_72332167_72332212	0.864286	Clock	ENSMUST00000045633.6|Mybbp1a|ENSMUSG00000040463.17|MYB binding protein (P160) 1a
mm39_v1_chr11_-_106679671_106679709	0.819331	Clock	ENSMUST00000123339.2|Ddx5|ENSMUSG00000020719.15|DEAD box helicase 5
mm39_v1_chr4_-_133484080_133484106	0.81248	Clock	ENSMUST00000008024.7|Arid1a|ENSMUSG00000007880.17|AT rich interactive domain 1A (SWI-like)
mm39_v1_chr2_+_130116357_130116412	0.810972	Clock	ENSMUST00000136621.9|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein	ENSMUST00000141872.2|Nop56|ENSMUSG00000027405.17|NOP56 ribonucleoprotein
mm39_v1_chr9_+_14695933_14696059	0.786156	Clock	ENSMUST00000034405.11|Mre11a|ENSMUSG00000031928.16|MRE11A homolog A, double strand break repair nuclease	ENSMUST00000115632.10|Mre11a|ENSMUSG00000031928.16|MRE11A homolog A, double strand break repair nuclease	ENSMUST00000147305.2|Mre11a|ENSMUSG00000031928.16|MRE11A homolog A, double strand break repair nuclease
mm39_v1_chr3_-_107992662_107992728	0.781734	Clock	ENSMUST00000078912.7|Ampd2|ENSMUSG00000027889.18|adenosine monophosphate deaminase 2
mm39_v1_chr17_-_45883421_45883481	0.749273	Clock	ENSMUST00000130406.2|Hsp90ab1|ENSMUSG00000023944.15|heat shock protein 90 alpha (cytosolic), class B member 1
mm39_v1_chr15_-_38079089_38079100	0.709634	Clock	ENSMUST00000110336.4|Ubr5|ENSMUSG00000037487.8|ubiquitin protein ligase E3 component n-recognin 5
mm39_v1_chr9_-_14695801_14695874	0.695694	Clock	ENSMUST00000214979.2|Ankrd49|ENSMUSG00000031931.5|ankyrin repeat domain 49	ENSMUST00000216037.2|Ankrd49|ENSMUSG00000031931.5|ankyrin repeat domain 49	ENSMUST00000214456.2|Ankrd49|ENSMUSG00000031931.5|ankyrin repeat domain 49
mm39_v1_chr2_+_14234198_14234215	0.671591	Clock	ENSMUST00000028045.4|Mrc1|ENSMUSG00000026712.4|mannose receptor, C type 1
mm39_v1_chr19_+_9995629_9995639	0.650391	Clock	ENSMUST00000131407.2|Rab3il1|ENSMUSG00000024663.21|RAB3A interacting protein (rabin3)-like 1
mm39_v1_chr11_+_101207021_101207123	0.642351	Clock	ENSMUST00000142640.8|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)	ENSMUST00000019470.14|Psme3|ENSMUSG00000078652.10|proteaseome (prosome, macropain) activator subunit 3 (PA28 gamma, Ki)
mm39_v1_chr17_+_47922497_47922544	0.630487	Clock	ENSMUST00000024778.3|Med20|ENSMUSG00000092558.4|mediator complex subunit 20
mm39_v1_chr1_-_181039509_181039580	0.618605	Clock	ENSMUST00000162819.9|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26	ENSMUST00000237749.2|Wdr26|ENSMUSG00000038733.15|WD repeat domain 26
mm39_v1_chr6_+_17463925_17464048	0.609482	Clock	ENSMUST00000115442.8|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr10_+_36850532_36850575	0.608818	Clock	ENSMUST00000019911.14|Hdac2|ENSMUSG00000019777.17|histone deacetylase 2	ENSMUST00000105510.2|Hdac2|ENSMUSG00000019777.17|histone deacetylase 2
mm39_v1_chr17_+_71511642_71511688	0.607012	Clock	ENSMUST00000126681.8|Lpin2|ENSMUSG00000024052.18|lipin 2
mm39_v1_chr5_+_77099229_77099241	0.601198	Clock	ENSMUST00000141687.2|Paics|ENSMUSG00000029247.18|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm39_v1_chr4_+_21848039_21848077	0.594483	Clock	ENSMUST00000098238.9|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich	ENSMUST00000108229.2|Pnisr|ENSMUSG00000028248.16|PNN interacting serine/arginine-rich
mm39_v1_chr2_+_18059982_18060048	0.59085	Clock	ENSMUST00000028076.15|Mllt10|ENSMUSG00000026743.17|myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10
mm39_v1_chr19_+_46044972_46045031	0.590707	Clock	ENSMUST00000111899.8|Pprc1|ENSMUSG00000055491.15|peroxisome proliferative activated receptor, gamma, coactivator-related 1	ENSMUST00000099392.10|Pprc1|ENSMUSG00000055491.15|peroxisome proliferative activated receptor, gamma, coactivator-related 1	ENSMUST00000062322.11|Pprc1|ENSMUSG00000055491.15|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm39_v1_chr4_+_32657105_32657167	0.587781	Clock	ENSMUST00000071642.11|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1	ENSMUST00000178134.2|Mdn1|ENSMUSG00000058006.13|midasin AAA ATPase 1
mm39_v1_chr5_+_77122530_77122575	0.583204	Clock	ENSMUST00000101087.10|Srp72|ENSMUSG00000036323.15|signal recognition particle 72	ENSMUST00000120550.2|Srp72|ENSMUSG00000036323.15|signal recognition particle 72
mm39_v1_chr17_+_71923210_71923254	0.568866	Clock	ENSMUST00000047086.10|Wdr43|ENSMUSG00000041057.11|WD repeat domain 43
mm39_v1_chr17_+_35219941_35219963	0.534174	Clock	ENSMUST00000087315.14|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr15_-_44651411_44651459	0.533959	Clock	ENSMUST00000090057.6|Sybu|ENSMUSG00000022340.16|syntabulin (syntaxin-interacting)	ENSMUST00000110269.8|Sybu|ENSMUSG00000022340.16|syntabulin (syntaxin-interacting)	ENSMUST00000228639.2|Sybu|ENSMUSG00000022340.16|syntabulin (syntaxin-interacting)
mm39_v1_chr17_+_35219998_35220073	0.533021	Clock	ENSMUST00000173584.8|Vars|ENSMUSG00000007029.17|valyl-tRNA synthetase
mm39_v1_chr3_+_145281941_145282091	0.51977	Clock	ENSMUST00000199033.5|Znhit6|ENSMUSG00000074182.9|zinc finger, HIT type 6	ENSMUST00000098534.9|Znhit6|ENSMUSG00000074182.9|zinc finger, HIT type 6	ENSMUST00000200574.5|Znhit6|ENSMUSG00000074182.9|zinc finger, HIT type 6	ENSMUST00000196413.5|Znhit6|ENSMUSG00000074182.9|zinc finger, HIT type 6	ENSMUST00000197604.3|Znhit6|ENSMUSG00000074182.9|zinc finger, HIT type 6
mm39_v1_chr2_+_83474779_83474837	0.514203	Clock	ENSMUST00000081591.7|Zc3h15|ENSMUSG00000027091.15|zinc finger CCCH-type containing 15
mm39_v1_chr7_-_144493560_144493606	0.512965	Clock	ENSMUST00000093962.5|Ccnd1|ENSMUSG00000070348.6|cyclin D1
mm39_v1_chr15_+_81695615_81695694	0.50848	Clock	ENSMUST00000023024.8|Tef|ENSMUSG00000022389.16|thyrotroph embryonic factor
mm39_v1_chr16_-_43709968_43710048	0.50663	Clock	ENSMUST00000023387.14|Qtrt2|ENSMUSG00000022704.17|queuine tRNA-ribosyltransferase accessory subunit 2
mm39_v1_chr6_+_83142902_83142986	0.495186	Clock	ENSMUST00000077407.12|Dctn1|ENSMUSG00000031865.17|dynactin 1	ENSMUST00000113913.8|Dctn1|ENSMUSG00000031865.17|dynactin 1	ENSMUST00000130212.8|Dctn1|ENSMUSG00000031865.17|dynactin 1
mm39_v1_chr18_-_60981981_60982050	0.485322	Clock	ENSMUST00000177172.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1	ENSMUST00000175934.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1	ENSMUST00000176630.8|Tcof1|ENSMUSG00000024613.17|treacle ribosome biogenesis factor 1
mm39_v1_chrX_+_35592006_35592071	0.4678	Clock	ENSMUST00000016383.10|Lonrf3|ENSMUSG00000016239.12|LON peptidase N-terminal domain and ring finger 3
mm39_v1_chr12_+_8724681_8724765	0.454893	Clock	ENSMUST00000168361.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000169750.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2	ENSMUST00000163730.8|Pum2|ENSMUSG00000020594.15|pumilio RNA-binding family member 2
mm39_v1_chr4_-_129636073_129636106	0.446695	Clock	ENSMUST00000066257.6|Khdrbs1|ENSMUSG00000028790.14|KH domain containing, RNA binding, signal transduction associated 1
mm39_v1_chr4_-_116263183_116263435	0.445748	Clock	ENSMUST00000123072.8|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2	ENSMUST00000144281.2|Mast2|ENSMUSG00000003810.14|microtubule associated serine/threonine kinase 2
mm39_v1_chr11_+_106107752_106107805	0.439312	Clock	ENSMUST00000021046.6|Ddx42|ENSMUSG00000020705.7|DEAD box helicase 42
mm39_v1_chr6_+_125073108_125073125	0.438686	Clock	ENSMUST00000112390.8|Chd4|ENSMUSG00000063870.13|chromodomain helicase DNA binding protein 4
mm39_v1_chr1_-_121495623_121495718	0.431837	Clock	ENSMUST00000001724.12|Ddx18|ENSMUSG00000001674.12|DEAD box helicase 18
mm39_v1_chr15_-_102533870_102533936	0.425838	Clock	ENSMUST00000184485.8|Atf7|ENSMUSG00000099083.8|activating transcription factor 7	ENSMUST00000185070.8|Atf7|ENSMUSG00000099083.8|activating transcription factor 7	ENSMUST00000184616.8|Atf7|ENSMUSG00000099083.8|activating transcription factor 7	ENSMUST00000108828.9|Atf7|ENSMUSG00000099083.8|activating transcription factor 7
mm39_v1_chr5_+_66833434_66833600	0.409256	Clock	ENSMUST00000031131.11|Uchl1|ENSMUSG00000029223.13|ubiquitin carboxy-terminal hydrolase L1
mm39_v1_chr11_-_118181044_118181070	0.408996	Clock	ENSMUST00000106296.9|Usp36|ENSMUSG00000033909.18|ubiquitin specific peptidase 36	ENSMUST00000092382.10|Usp36|ENSMUSG00000033909.18|ubiquitin specific peptidase 36
mm39_v1_chr14_-_118943591_118943648	0.407755	Clock	ENSMUST00000036554.14|Abcc4|ENSMUSG00000032849.15|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	ENSMUST00000166646.2|Abcc4|ENSMUSG00000032849.15|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm39_v1_chr12_+_59178072_59178255	0.402693	Clock	ENSMUST00000176464.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000170992.9|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2	ENSMUST00000176322.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr3_+_135531409_135531425	0.400298	Clock	ENSMUST00000180196.8|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr11_-_76108316_76108490	0.39706	Clock	ENSMUST00000102500.5|Gemin4|ENSMUSG00000049396.7|gem nuclear organelle associated protein 4
mm39_v1_chr4_+_109263820_109263961	0.385802	Clock	ENSMUST00000124209.8|Ttc39a|ENSMUSG00000028555.16|tetratricopeptide repeat domain 39A
mm39_v1_chr3_+_135531834_135531851	0.380702	Clock	ENSMUST00000029810.6|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr6_+_17463819_17463833	0.380092	Clock	ENSMUST00000140070.8|Met|ENSMUSG00000009376.16|met proto-oncogene
mm39_v1_chr16_+_35590745_35590766	0.371807	Clock	ENSMUST00000231579.2|Hspbap1|ENSMUSG00000022849.6|Hspb associated protein 1
mm39_v1_chr4_+_44756553_44756601	0.365088	Clock	ENSMUST00000107824.9|Zcchc7|ENSMUSG00000035649.18|zinc finger, CCHC domain containing 7
mm39_v1_chr11_+_106680062_106680141	0.361478	Clock	ENSMUST00000103068.10|Cep95|ENSMUSG00000018372.14|centrosomal protein 95	ENSMUST00000018516.11|Cep95|ENSMUSG00000018372.14|centrosomal protein 95
mm39_v1_chr11_+_100751272_100751363	0.347163	Clock	ENSMUST00000107357.4|Stat5a|ENSMUSG00000004043.15|signal transducer and activator of transcription 5A
mm39_v1_chr14_+_30741082_30741114	0.338664	Clock	ENSMUST00000112098.11|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112095.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000112106.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000146325.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chrX_-_92675719_92675793	0.338648	Clock	ENSMUST00000006856.3|Pola1|ENSMUSG00000006678.7|polymerase (DNA directed), alpha 1
mm39_v1_chr13_-_76091931_76092069	0.338287	Clock	ENSMUST00000022078.12|Rhobtb3|ENSMUSG00000021589.14|Rho-related BTB domain containing 3	ENSMUST00000109606.3|Rhobtb3|ENSMUSG00000021589.14|Rho-related BTB domain containing 3
mm39_v1_chr11_+_70735751_70735801	0.336399	Clock	ENSMUST00000177731.8|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000108533.10|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000081362.13|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1	ENSMUST00000178245.2|Rabep1|ENSMUSG00000020817.17|rabaptin, RAB GTPase binding effector protein 1
mm39_v1_chr13_-_63712349_63712349	0.336068	Clock	ENSMUST00000192155.6|Ptch1|ENSMUSG00000021466.13|patched 1
mm39_v1_chr11_-_118180895_118181038	0.329931	Clock	ENSMUST00000144153.8|Usp36|ENSMUSG00000033909.18|ubiquitin specific peptidase 36
mm39_v1_chr2_+_115412148_115412225	0.318955	Clock	ENSMUST00000166472.8|Cdin1|ENSMUSG00000040282.14|CDAN1 interacting nuclease 1	ENSMUST00000110918.3|Cdin1|ENSMUSG00000040282.14|CDAN1 interacting nuclease 1
mm39_v1_chr11_-_51647204_51647289	0.316849	Clock	ENSMUST00000109092.8|Sec24a|ENSMUSG00000036391.17|Sec24 related gene family, member A (S. cerevisiae)	ENSMUST00000064297.5|Sec24a|ENSMUSG00000036391.17|Sec24 related gene family, member A (S. cerevisiae)
mm39_v1_chr9_+_107464841_107464855	0.31674	Clock	ENSMUST00000010192.11|Ifrd2|ENSMUSG00000010048.11|interferon-related developmental regulator 2
mm39_v1_chr16_+_18695787_18696027	0.315901	Clock	ENSMUST00000120532.9|Hira|ENSMUSG00000022702.17|histone cell cycle regulator	ENSMUST00000004222.14|Hira|ENSMUSG00000022702.17|histone cell cycle regulator
mm39_v1_chr17_-_28705055_28705075	0.296044	Clock	ENSMUST00000233870.2|Fkbp5|ENSMUSG00000024222.18|FK506 binding protein 5
mm39_v1_chr4_-_148529187_148529241	0.284007	Clock	ENSMUST00000051633.3|Ubiad1|ENSMUSG00000047719.3|UbiA prenyltransferase domain containing 1
mm39_v1_chrX_-_94488394_94488478	0.281916	Clock	ENSMUST00000084535.6|Amer1|ENSMUSG00000050332.8|APC membrane recruitment 1
mm39_v1_chr12_+_17594795_17594893	0.277199	Clock	ENSMUST00000171737.3|Odc1|ENSMUSG00000011179.9|ornithine decarboxylase, structural 1
mm39_v1_chr5_+_35156454_35156528	0.275097	Clock	ENSMUST00000114283.8|Rgs12|ENSMUSG00000029101.17|regulator of G-protein signaling 12
mm39_v1_chr1_-_166237341_166237432	0.269	Clock	ENSMUST00000135673.8|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain	ENSMUST00000169324.8|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain	ENSMUST00000128861.3|Pogk|ENSMUSG00000040596.16|pogo transposable element with KRAB domain
mm39_v1_chr7_-_29204812_29204898	0.267362	Clock	ENSMUST00000183096.8|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3	ENSMUST00000085809.11|Sipa1l3|ENSMUSG00000030583.17|signal-induced proliferation-associated 1 like 3
mm39_v1_chr19_-_29790352_29790375	0.265878	Clock	ENSMUST00000099525.5|Ranbp6|ENSMUSG00000074909.6|RAN binding protein 6
mm39_v1_chr12_+_59178258_59178288	0.263451	Clock	ENSMUST00000177162.8|Mia2|ENSMUSG00000021000.18|MIA SH3 domain ER export factor 2
mm39_v1_chr9_+_43978290_43978319	0.256666	Clock	ENSMUST00000034508.14|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chr3_+_41519289_41519341	0.25546	Clock	ENSMUST00000168086.7|Jade1|ENSMUSG00000025764.15|jade family PHD finger 1
mm39_v1_chr11_-_106107132_106107189	0.251998	Clock	ENSMUST00000002043.10|Ccdc47|ENSMUSG00000078622.9|coiled-coil domain containing 47
mm39_v1_chr18_+_32970278_32970292	0.250554	Clock	ENSMUST00000053663.11|Wdr36|ENSMUSG00000038299.17|WD repeat domain 36
mm39_v1_chr9_+_40712562_40712598	0.239959	Clock	ENSMUST00000117557.8|Hspa8|ENSMUSG00000015656.18|heat shock protein 8
mm39_v1_chr8_+_91555449_91555470	0.234026	Clock	ENSMUST00000109614.9|Chd9|ENSMUSG00000056608.15|chromodomain helicase DNA binding protein 9
mm39_v1_chrX_-_36127891_36127899	0.232071	Clock	ENSMUST00000115249.10|C330007P06Rik|ENSMUSG00000006423.16|RIKEN cDNA C330007P06 gene	ENSMUST00000115248.10|C330007P06Rik|ENSMUSG00000006423.16|RIKEN cDNA C330007P06 gene
mm39_v1_chr5_+_31855394_31855411	0.22317	Clock	ENSMUST00000063813.11|Babam2|ENSMUSG00000052139.19|BRISC and BRCA1 A complex member 2	ENSMUST00000071531.12|Babam2|ENSMUSG00000052139.19|BRISC and BRCA1 A complex member 2	ENSMUST00000131995.7|Babam2|ENSMUSG00000052139.19|BRISC and BRCA1 A complex member 2	ENSMUST00000114507.10|Babam2|ENSMUSG00000052139.19|BRISC and BRCA1 A complex member 2
mm39_v1_chr12_+_71183622_71183622	0.220208	Clock	ENSMUST00000149564.8|2700049A03Rik|ENSMUSG00000034601.18|RIKEN cDNA 2700049A03 gene
mm39_v1_chr18_+_32970363_32970385	0.211666	Clock	ENSMUST00000166214.9|Wdr36|ENSMUSG00000038299.17|WD repeat domain 36
mm39_v1_chr3_+_135531548_135531562	0.210046	Clock	ENSMUST00000167390.8|Slc39a8|ENSMUSG00000053897.16|solute carrier family 39 (metal ion transporter), member 8
mm39_v1_chr2_+_48839505_48839629	0.206949	Clock	ENSMUST00000112745.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5	ENSMUST00000112754.8|Mbd5|ENSMUSG00000036792.13|methyl-CpG binding domain protein 5
mm39_v1_chr5_-_108922819_108922898	0.204777	Clock	ENSMUST00000200159.2|Rnf212|ENSMUSG00000055385.13|ring finger protein 212	ENSMUST00000212212.2|Rnf212|ENSMUSG00000055385.13|ring finger protein 212
mm39_v1_chr1_-_52539395_52539459	0.188665	Clock	ENSMUST00000186764.7|Nab1|ENSMUSG00000002881.15|Ngfi-A binding protein 1
mm39_v1_chr5_+_120254530_120254617	0.184717	Clock	ENSMUST00000031590.12|Rbm19|ENSMUSG00000029594.13|RNA binding motif protein 19
mm39_v1_chr4_+_132001680_132001744	0.18425	Clock	ENSMUST00000030731.11|Taf12|ENSMUSG00000028899.12|TATA-box binding protein associated factor 12	ENSMUST00000105963.2|Taf12|ENSMUSG00000028899.12|TATA-box binding protein associated factor 12
mm39_v1_chr14_+_4230658_4230743	0.182726	Clock	ENSMUST00000225491.2|Nr1d2|ENSMUSG00000021775.12|nuclear receptor subfamily 1, group D, member 2
mm39_v1_chr9_+_110162470_110162704	0.171077	Clock	ENSMUST00000198761.5|Scap|ENSMUSG00000032485.15|SREBF chaperone	ENSMUST00000197630.3|Scap|ENSMUSG00000032485.15|SREBF chaperone
mm39_v1_chr15_+_80556023_80556062	0.169977	Clock	ENSMUST00000023044.7|Fam83f|ENSMUSG00000022408.8|family with sequence similarity 83, member F
mm39_v1_chr5_+_77099154_77099215	0.169682	Clock	ENSMUST00000031160.16|Paics|ENSMUSG00000029247.18|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	ENSMUST00000120912.8|Paics|ENSMUSG00000029247.18|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	ENSMUST00000117536.8|Paics|ENSMUSG00000029247.18|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm39_v1_chr19_+_26600820_26600872	0.169447	Clock	ENSMUST00000176584.2|Smarca2|ENSMUSG00000024921.18|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm39_v1_chr7_+_127345909_127345947	0.159751	Clock	ENSMUST00000033081.14|Fbxl19|ENSMUSG00000030811.15|F-box and leucine-rich repeat protein 19
mm39_v1_chr2_-_118380149_118380168	0.159575	Clock	ENSMUST00000090219.13|Bmf|ENSMUSG00000040093.17|BCL2 modifying factor
mm39_v1_chr17_-_45884179_45884201	0.155706	Clock	ENSMUST00000165127.8|Hsp90ab1|ENSMUSG00000023944.15|heat shock protein 90 alpha (cytosolic), class B member 1	ENSMUST00000166469.8|Hsp90ab1|ENSMUSG00000023944.15|heat shock protein 90 alpha (cytosolic), class B member 1	ENSMUST00000024739.14|Hsp90ab1|ENSMUSG00000023944.15|heat shock protein 90 alpha (cytosolic), class B member 1
mm39_v1_chr11_-_120238917_120239020	0.14986	Clock	ENSMUST00000106215.11|Actg1|ENSMUSG00000062825.16|actin, gamma, cytoplasmic 1
mm39_v1_chr11_+_94520567_94520660	0.149599	Clock	ENSMUST00000021239.7|Lrrc59|ENSMUSG00000020869.9|leucine rich repeat containing 59
mm39_v1_chr12_-_32000169_32000196	0.147423	Clock	ENSMUST00000176520.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr5_-_108943211_108943241	0.146204	Clock	ENSMUST00000004943.2|Tmed11|ENSMUSG00000004821.2|transmembrane p24 trafficking protein 11
mm39_v1_chr10_+_69048506_69048524	0.138717	Clock	ENSMUST00000167384.8|Rhobtb1|ENSMUSG00000019944.15|Rho-related BTB domain containing 1
mm39_v1_chr12_+_69418886_69418946	0.136134	Clock	ENSMUST00000050063.9|Arf6|ENSMUSG00000044147.9|ADP-ribosylation factor 6
mm39_v1_chr6_+_49296208_49296308	0.130715	Clock	ENSMUST00000055559.8|Ccdc126|ENSMUSG00000050786.9|coiled-coil domain containing 126	ENSMUST00000114491.2|Ccdc126|ENSMUSG00000050786.9|coiled-coil domain containing 126
mm39_v1_chr4_-_156077061_156077131	0.122091	Clock	ENSMUST00000052185.5|B3galt6|ENSMUSG00000050796.5|UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6
mm39_v1_chr2_-_168048984_168049062	0.118961	Clock	ENSMUST00000088001.6|Adnp|ENSMUSG00000051149.16|activity-dependent neuroprotective protein
mm39_v1_chr14_-_20718337_20718422	0.114053	Clock	ENSMUST00000057090.12|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like	ENSMUST00000117386.2|Synpo2l|ENSMUSG00000039376.14|synaptopodin 2-like
mm39_v1_chr7_-_68398989_68398998	0.110318	Clock	ENSMUST00000048068.15|Arrdc4|ENSMUSG00000042659.16|arrestin domain containing 4
mm39_v1_chr4_-_124587340_124587399	0.104048	Clock	ENSMUST00000030738.8|Utp11|ENSMUSG00000028907.8|UTP11 small subunit processome component
mm39_v1_chr3_-_108117754_108117818	0.0936336	Clock	ENSMUST00000117784.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000119650.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2	ENSMUST00000117409.8|Atxn7l2|ENSMUSG00000048997.18|ataxin 7-like 2
mm39_v1_chr9_-_110483210_110483262	0.0934109	Clock	ENSMUST00000196488.5|Nbeal2|ENSMUSG00000056724.16|neurobeachin-like 2	ENSMUST00000133191.8|Nbeal2|ENSMUSG00000056724.16|neurobeachin-like 2	ENSMUST00000167320.8|Nbeal2|ENSMUSG00000056724.16|neurobeachin-like 2
mm39_v1_chr11_-_51891575_51891604	0.0907067	Clock	ENSMUST00000109086.8|Ube2b|ENSMUSG00000020390.13|ubiquitin-conjugating enzyme E2B
mm39_v1_chr9_+_110162345_110162394	0.0907012	Clock	ENSMUST00000198976.5|Scap|ENSMUSG00000032485.15|SREBF chaperone
mm39_v1_chr16_-_44978986_44979008	0.0904089	Clock	ENSMUST00000180636.8|Slc35a5|ENSMUSG00000022664.12|solute carrier family 35, member A5
mm39_v1_chr17_-_47922374_47922471	0.0863155	Clock	ENSMUST00000024783.9|Bysl|ENSMUSG00000023988.9|bystin-like
mm39_v1_chr11_+_67689094_67689113	0.0844192	Clock	ENSMUST00000168612.8|Dhrs7c|ENSMUSG00000033044.13|dehydrogenase/reductase (SDR family) member 7C
mm39_v1_chr8_-_37081091_37081102	0.083303	Clock	ENSMUST00000033923.14|Dlc1|ENSMUSG00000031523.17|deleted in liver cancer 1
mm39_v1_chr19_+_46045675_46045768	0.0817887	Clock	ENSMUST00000126127.8|Pprc1|ENSMUSG00000055491.15|peroxisome proliferative activated receptor, gamma, coactivator-related 1	ENSMUST00000147640.2|Pprc1|ENSMUSG00000055491.15|peroxisome proliferative activated receptor, gamma, coactivator-related 1
mm39_v1_chr15_-_51728893_51728919	0.0799527	Clock	ENSMUST00000022925.10|Eif3h|ENSMUSG00000022312.12|eukaryotic translation initiation factor 3, subunit H
mm39_v1_chr17_-_28705082_28705123	0.0765841	Clock	ENSMUST00000079413.11|Fkbp5|ENSMUSG00000024222.18|FK506 binding protein 5
mm39_v1_chr4_+_44756608_44756680	0.0764509	Clock	ENSMUST00000143385.2|Zcchc7|ENSMUSG00000035649.18|zinc finger, CCHC domain containing 7
mm39_v1_chr2_+_27405169_27405241	0.0755484	Clock	ENSMUST00000113952.10|Wdr5|ENSMUSG00000026917.16|WD repeat domain 5
mm39_v1_chr11_+_74721733_74721746	0.067554	Clock	ENSMUST00000000291.9|Mnt|ENSMUSG00000000282.13|max binding protein
mm39_v1_chr14_+_30741115_30741135	0.0630156	Clock	ENSMUST00000112094.8|Pbrm1|ENSMUSG00000042323.18|polybromo 1	ENSMUST00000144009.2|Pbrm1|ENSMUSG00000042323.18|polybromo 1
mm39_v1_chr12_-_32000209_32000245	0.0563991	Clock	ENSMUST00000176084.2|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000176103.8|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1	ENSMUST00000167458.9|Hbp1|ENSMUSG00000002996.18|high mobility group box transcription factor 1
mm39_v1_chr16_+_43710163_43710183	0.0515415	Clock	ENSMUST00000132859.8|Ccdc191|ENSMUSG00000022701.19|coiled-coil domain containing 191	ENSMUST00000178400.9|Ccdc191|ENSMUSG00000022701.19|coiled-coil domain containing 191
mm39_v1_chr16_-_44978546_44978649	0.0514904	Clock	ENSMUST00000114600.2|Slc35a5|ENSMUSG00000022664.12|solute carrier family 35, member A5
mm39_v1_chr1_-_186438177_186438196	0.0382883	Clock	ENSMUST00000045288.14|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr19_-_29782907_29782907	0.0377879	Clock	ENSMUST00000175726.8|9930021J03Rik|ENSMUSG00000046138.16|RIKEN cDNA 9930021J03 gene
mm39_v1_chr2_-_48839218_48839268	0.0299839	Clock	ENSMUST00000090976.10|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4	ENSMUST00000149679.8|Orc4|ENSMUSG00000026761.13|origin recognition complex, subunit 4
mm39_v1_chr12_+_24701273_24701410	0.029681	Clock	ENSMUST00000020982.7|Klf11|ENSMUSG00000020653.13|Kruppel-like factor 11
mm39_v1_chr9_+_43978369_43978432	0.0292709	Clock	ENSMUST00000177054.8|Usp2|ENSMUSG00000032010.16|ubiquitin specific peptidase 2
mm39_v1_chr11_-_100650768_100650837	0.0273307	Clock	ENSMUST00000107363.3|Kcnh4|ENSMUSG00000035355.16|potassium voltage-gated channel, subfamily H (eag-related), member 4
mm39_v1_chr16_+_23247883_23247883	0.0236398	Clock	ENSMUST00000038730.7|Rtp1|ENSMUSG00000033383.7|receptor transporter protein 1
mm39_v1_chr9_-_121324744_121324760	0.0203489	Clock	ENSMUST00000035120.6|Cck|ENSMUSG00000032532.8|cholecystokinin
mm39_v1_chr16_-_44978929_44978977	0.019853	Clock	ENSMUST00000181177.2|Slc35a5|ENSMUSG00000022664.12|solute carrier family 35, member A5
mm39_v1_chr9_+_58041300_58041358	0.0182454	Clock	ENSMUST00000134955.8|Stra6|ENSMUSG00000032327.15|stimulated by retinoic acid gene 6	ENSMUST00000147134.8|Stra6|ENSMUSG00000032327.15|stimulated by retinoic acid gene 6	ENSMUST00000170397.8|Stra6|ENSMUSG00000032327.15|stimulated by retinoic acid gene 6
mm39_v1_chr7_+_19311212_19311257	0.0156031	Clock	ENSMUST00000108453.2|Zfp296|ENSMUSG00000011267.9|zinc finger protein 296
mm39_v1_chr1_-_186437760_186437897	0.015457	Clock	ENSMUST00000195201.2|Tgfb2|ENSMUSG00000039239.15|transforming growth factor, beta 2
mm39_v1_chr16_-_33787399_33787413	0.00317701	Clock	ENSMUST00000023510.7|Umps|ENSMUSG00000022814.7|uridine monophosphate synthetase
mm39_v1_chr2_+_90865958_90865986	0.00294122	Clock	ENSMUST00000111445.10|Rapsn|ENSMUSG00000002104.12|receptor-associated protein of the synapse	ENSMUST00000111446.10|Rapsn|ENSMUSG00000002104.12|receptor-associated protein of the synapse	ENSMUST00000050323.6|Rapsn|ENSMUSG00000002104.12|receptor-associated protein of the synapse
mm39_v1_chr3_+_88439616_88439703	0.00267106	Clock	ENSMUST00000172699.2|Mex3a|ENSMUSG00000074480.5|mex3 RNA binding family member A
