avrg: GSE58827: Dynamics of the Mouse Liver
ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.
Sample | Condition |
---|---|
Day_-0002_rep1 | Day_-2 |
Day_-0002_rep2 | Day_-2 |
Day_-0002_rep3 | Day_-2 |
Day_00_rep1 | Day_0 |
Day_00_rep2 | Day_0 |
Day_00_rep3 | Day_0 |
Day_01_rep1 | Day_1 |
Day_01_rep2 | Day_1 |
Day_01_rep3 | Day_1 |
Day_03_rep1 | Day_3 |
Day_03_rep2 | Day_3 |
Day_03_rep3 | Day_3 |
Day_05_rep1 | Day_5 |
Day_05_rep2 | Day_5 |
Day_05_rep3 | Day_5 |
Day_10_rep1 | Day_10 |
Day_10_rep2 | Day_10 |
Day_10_rep3 | Day_10 |
Day_15_rep1 | Day_15 |
Day_15_rep2 | Day_15 |
Day_15_rep3 | Day_15 |
Day_20_rep1 | Day_20 |
Day_20_rep2 | Day_20 |
Day_20_rep3 | Day_20 |
Day_25_rep1 | Day_25 |
Day_25_rep2 | Day_25 |
Day_25_rep3 | Day_25 |
Day_30_rep1 | Day_30 |
Day_30_rep2 | Day_30 |
Day_30_rep3 | Day_30 |
Day_45_rep1 | Day_45 |
Day_45_rep2 | Day_45 |
Day_45_rep3 | Day_45 |
Day_60_rep1 | Day_60 |
Day_60_rep2 | Day_60 |
Day_60_rep3 | Day_60 |
Motif name | Z-value | Associated genes | Profile | Logo |
---|---|---|---|---|
Hnf4a | 10.60 |
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E2f2_E2f5 | 9.72 |
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Elf1_Elf2_Etv2_Elf4 | 8.62 |
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E2f1 | 8.51 |
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Ybx1_Nfya_Nfyb_Nfyc_Cebpz | 8.39 |
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Pparg_Rxrg | 7.79 |
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Spic | 7.61 |
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Myf6 | 7.51 |
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Tal1 | 7.19 |
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Gata2_Gata1 | 7.08 |
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In order to use ARMADA for infering putative regulatory networks from timecourse data, please set for every sample a timepoint, gap from previous timepoint and replicate. If you have only one replicate per sample you can leave replicate field unset.